data_2LY6 # _entry.id 2LY6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2LY6 pdb_00002ly6 10.2210/pdb2ly6/pdb RCSB RCSB102979 ? ? BMRB 18710 ? ? WWPDB D_1000102979 ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 18710 BMRB unspecified . 2LY5 PDB unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2LY6 _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-09-12 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cornilescu, C.C.' 1 'Cornilescu, G.' 2 'Tonelli, M.' 3 'Markley, J.L.' 4 'Assadi-Porter, F.M.' 5 # _citation.id primary _citation.title 'Temperature-dependent conformational change affecting Tyr11 and sweetness loops of brazzein.' _citation.journal_abbrev Proteins _citation.journal_volume 81 _citation.page_first 919 _citation.page_last 925 _citation.year 2013 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23349025 _citation.pdbx_database_id_DOI 10.1002/prot.24259 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cornilescu, C.C.' 1 ? primary 'Cornilescu, G.' 2 ? primary 'Rao, H.' 3 ? primary 'Porter, S.F.' 4 ? primary 'Tonelli, M.' 5 ? primary 'Derider, M.L.' 6 ? primary 'Markley, J.L.' 7 ? primary 'Assadi-Porter, F.M.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Defensin-like protein' _entity.formula_weight 6380.229 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name Brazzein # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code DKCKKVYENYPVSKCQLANQCNYDCKLDKHARSGECFYDEKRNLQCICDYCEY _entity_poly.pdbx_seq_one_letter_code_can DKCKKVYENYPVSKCQLANQCNYDCKLDKHARSGECFYDEKRNLQCICDYCEY _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 LYS n 1 3 CYS n 1 4 LYS n 1 5 LYS n 1 6 VAL n 1 7 TYR n 1 8 GLU n 1 9 ASN n 1 10 TYR n 1 11 PRO n 1 12 VAL n 1 13 SER n 1 14 LYS n 1 15 CYS n 1 16 GLN n 1 17 LEU n 1 18 ALA n 1 19 ASN n 1 20 GLN n 1 21 CYS n 1 22 ASN n 1 23 TYR n 1 24 ASP n 1 25 CYS n 1 26 LYS n 1 27 LEU n 1 28 ASP n 1 29 LYS n 1 30 HIS n 1 31 ALA n 1 32 ARG n 1 33 SER n 1 34 GLY n 1 35 GLU n 1 36 CYS n 1 37 PHE n 1 38 TYR n 1 39 ASP n 1 40 GLU n 1 41 LYS n 1 42 ARG n 1 43 ASN n 1 44 LEU n 1 45 GLN n 1 46 CYS n 1 47 ILE n 1 48 CYS n 1 49 ASP n 1 50 TYR n 1 51 CYS n 1 52 GLU n 1 53 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pentadiplandra brazzeana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 43545 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET24d _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DEF_PENBA _struct_ref.pdbx_db_accession P56552 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code DKCKKVYENYPVSKCQLANQCNYDCKLDKHARSGECFYDEKRNLQCICDYCEY _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2LY6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 53 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P56552 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 54 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 54 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 2 1 2 '2D 1H-15N HSQC' 2 2 2 '2D 1H-13C HSQC' 1 3 1 '2D 1H-15N HSQC' 1 4 1 '2D 1H-13C HSQC' 1 5 1 '3D CBCA(CO)NH' 1 6 1 '3D C(CO)NH' 1 7 1 '3D HNCO' 1 8 1 '3D HNCACB' 1 9 1 '3D HBHA(CO)NH' 1 10 1 '3D H(CCO)NH' 1 11 1 '3D HCCH-TOCSY' 1 12 1 '3D 1H-15N NOESY' 1 13 1 '2D 1H-13C HSQC aliphatic' 1 14 1 '2D 1H-13C HSQC aromatic' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.temperature_units 1 5 5.2 ambient ? 276 K 2 5 5.2 ambient ? 276 K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '1-2 mM [U-13C; U-15N] protein, 5 mM sodium chloride, 93% H2O/7% D2O' 1 '93% H2O/7% D2O' '1-2 mM [U-13C; U-15N] protein, 5 mM sodium chloride, 93% H2O/7% D2O' 2 '93% H2O/7% D2O' # _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2LY6 _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2LY6 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2LY6 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal Varian collection VnmrJ ? 1 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 2 Garrett 'data analysis' PIPP ? 3 Garrett 'peak picking' PIPP ? 4 Garrett 'chemical shift assignment' PIPP ? 5 'Cornilescu, Delaglio and Bax' 'backbone torsion angles' TALOS ? 6 'Schwieters, Kuszewski, Tjandra and Clore' 'geometry optimization' 'X-PLOR NIH' ? 7 'Schwieters, Kuszewski, Tjandra and Clore' 'structure solution' 'X-PLOR NIH' ? 8 'Schwieters, Kuszewski, Tjandra and Clore' refinement 'X-PLOR NIH' ? 9 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2LY6 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2LY6 _struct.title 'Refined solution structure of recombinant brazzein at low temperature' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2LY6 _struct_keywords.pdbx_keywords 'PLANT PROTEIN' _struct_keywords.text 'CYS-SAIL, brazzein, PLANT PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 11 ? GLN A 16 ? PRO A 12 GLN A 17 1 ? 6 HELX_P HELX_P2 2 LEU A 17 ? LYS A 29 ? LEU A 18 LYS A 30 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 51 SG ? ? A CYS 4 A CYS 52 1_555 ? ? ? ? ? ? ? 2.020 ? ? disulf2 disulf ? ? A CYS 15 SG ? ? ? 1_555 A CYS 36 SG ? ? A CYS 16 A CYS 37 1_555 ? ? ? ? ? ? ? 2.019 ? ? disulf3 disulf ? ? A CYS 21 SG ? ? ? 1_555 A CYS 36 SG ? ? A CYS 22 A CYS 37 1_555 ? ? ? ? ? ? ? 2.952 ? ? disulf4 disulf ? ? A CYS 21 SG ? ? ? 1_555 A CYS 46 SG ? ? A CYS 22 A CYS 47 1_555 ? ? ? ? ? ? ? 2.020 ? ? disulf5 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 48 SG ? ? A CYS 26 A CYS 49 1_555 ? ? ? ? ? ? ? 2.020 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 4 ? VAL A 6 ? LYS A 5 VAL A 7 A 2 LEU A 44 ? ASP A 49 ? LEU A 45 ASP A 50 A 3 GLU A 35 ? TYR A 38 ? GLU A 36 TYR A 39 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 5 ? N LYS A 6 O CYS A 48 ? O CYS A 49 A 2 3 O ILE A 47 ? O ILE A 48 N GLU A 35 ? N GLU A 36 # _atom_sites.entry_id 2LY6 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 2 2 ASP ASP A . n A 1 2 LYS 2 3 3 LYS LYS A . n A 1 3 CYS 3 4 4 CYS CYS A . n A 1 4 LYS 4 5 5 LYS LYS A . n A 1 5 LYS 5 6 6 LYS LYS A . n A 1 6 VAL 6 7 7 VAL VAL A . n A 1 7 TYR 7 8 8 TYR TYR A . n A 1 8 GLU 8 9 9 GLU GLU A . n A 1 9 ASN 9 10 10 ASN ASN A . n A 1 10 TYR 10 11 11 TYR TYR A . n A 1 11 PRO 11 12 12 PRO PRO A . n A 1 12 VAL 12 13 13 VAL VAL A . n A 1 13 SER 13 14 14 SER SER A . n A 1 14 LYS 14 15 15 LYS LYS A . n A 1 15 CYS 15 16 16 CYS CYS A . n A 1 16 GLN 16 17 17 GLN GLN A . n A 1 17 LEU 17 18 18 LEU LEU A . n A 1 18 ALA 18 19 19 ALA ALA A . n A 1 19 ASN 19 20 20 ASN ASN A . n A 1 20 GLN 20 21 21 GLN GLN A . n A 1 21 CYS 21 22 22 CYS CYS A . n A 1 22 ASN 22 23 23 ASN ASN A . n A 1 23 TYR 23 24 24 TYR TYR A . n A 1 24 ASP 24 25 25 ASP ASP A . n A 1 25 CYS 25 26 26 CYS CYS A . n A 1 26 LYS 26 27 27 LYS LYS A . n A 1 27 LEU 27 28 28 LEU LEU A . n A 1 28 ASP 28 29 29 ASP ASP A . n A 1 29 LYS 29 30 30 LYS LYS A . n A 1 30 HIS 30 31 31 HIS HIS A . n A 1 31 ALA 31 32 32 ALA ALA A . n A 1 32 ARG 32 33 33 ARG ARG A . n A 1 33 SER 33 34 34 SER SER A . n A 1 34 GLY 34 35 35 GLY GLY A . n A 1 35 GLU 35 36 36 GLU GLU A . n A 1 36 CYS 36 37 37 CYS CYS A . n A 1 37 PHE 37 38 38 PHE PHE A . n A 1 38 TYR 38 39 39 TYR TYR A . n A 1 39 ASP 39 40 40 ASP ASP A . n A 1 40 GLU 40 41 41 GLU GLU A . n A 1 41 LYS 41 42 42 LYS LYS A . n A 1 42 ARG 42 43 43 ARG ARG A . n A 1 43 ASN 43 44 44 ASN ASN A . n A 1 44 LEU 44 45 45 LEU LEU A . n A 1 45 GLN 45 46 46 GLN GLN A . n A 1 46 CYS 46 47 47 CYS CYS A . n A 1 47 ILE 47 48 48 ILE ILE A . n A 1 48 CYS 48 49 49 CYS CYS A . n A 1 49 ASP 49 50 50 ASP ASP A . n A 1 50 TYR 50 51 51 TYR TYR A . n A 1 51 CYS 51 52 52 CYS CYS A . n A 1 52 GLU 52 53 53 GLU GLU A . n A 1 53 TYR 53 54 54 TYR TYR A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-10-17 2 'Structure model' 1 1 2013-01-30 3 'Structure model' 1 2 2013-02-06 4 'Structure model' 1 3 2013-06-05 5 'Structure model' 1 4 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' database_2 2 5 'Structure model' pdbx_database_status 3 5 'Structure model' pdbx_nmr_software 4 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 5 'Structure model' '_pdbx_nmr_software.name' 5 5 'Structure model' '_struct_conn.pdbx_dist_value' 6 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 7 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id entity-1 ? 1-2 mM '[U-13C; U-15N]' 1 'sodium chloride-2' 5 ? mM ? 1 entity-3 ? 1-2 mM '[U-13C; U-15N]' 2 'sodium chloride-4' 5 ? mM ? 2 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A CYS 22 ? ? H A CYS 26 ? ? 1.44 2 1 O A GLU 9 ? ? H A TYR 11 ? ? 1.48 3 1 O A LEU 18 ? ? H A GLN 21 ? ? 1.57 4 2 O A CYS 22 ? ? H A CYS 26 ? ? 1.44 5 2 O A GLU 9 ? ? H A TYR 11 ? ? 1.49 6 2 O A LEU 18 ? ? H A GLN 21 ? ? 1.58 7 3 O A CYS 22 ? ? H A CYS 26 ? ? 1.45 8 3 O A GLU 9 ? ? H A TYR 11 ? ? 1.50 9 4 O A CYS 22 ? ? H A CYS 26 ? ? 1.44 10 4 O A GLU 9 ? ? H A TYR 11 ? ? 1.48 11 4 O A LEU 18 ? ? H A GLN 21 ? ? 1.54 12 5 O A CYS 22 ? ? H A CYS 26 ? ? 1.44 13 5 O A GLU 9 ? ? H A TYR 11 ? ? 1.49 14 5 O A LEU 18 ? ? H A GLN 21 ? ? 1.57 15 6 O A CYS 22 ? ? H A CYS 26 ? ? 1.45 16 6 O A GLU 9 ? ? H A TYR 11 ? ? 1.48 17 6 O A LEU 18 ? ? H A GLN 21 ? ? 1.55 18 6 HH A TYR 8 ? ? OD2 A ASP 29 ? ? 1.60 19 7 O A CYS 22 ? ? H A CYS 26 ? ? 1.44 20 7 O A GLU 9 ? ? H A TYR 11 ? ? 1.47 21 7 O A LEU 18 ? ? H A GLN 21 ? ? 1.57 22 8 O A CYS 22 ? ? H A CYS 26 ? ? 1.44 23 8 O A GLU 9 ? ? H A TYR 11 ? ? 1.49 24 8 O A LEU 18 ? ? H A GLN 21 ? ? 1.56 25 9 O A CYS 22 ? ? H A CYS 26 ? ? 1.44 26 9 O A GLU 9 ? ? H A TYR 11 ? ? 1.49 27 9 O A LEU 18 ? ? H A GLN 21 ? ? 1.59 28 10 O A CYS 22 ? ? H A CYS 26 ? ? 1.43 29 10 O A GLU 9 ? ? H A TYR 11 ? ? 1.46 30 10 O A LEU 18 ? ? H A GLN 21 ? ? 1.56 31 11 O A CYS 22 ? ? H A CYS 26 ? ? 1.46 32 11 O A GLU 9 ? ? H A TYR 11 ? ? 1.49 33 11 O A LEU 18 ? ? H A GLN 21 ? ? 1.50 34 12 O A CYS 22 ? ? H A CYS 26 ? ? 1.44 35 12 O A GLU 9 ? ? H A TYR 11 ? ? 1.48 36 12 O A LEU 18 ? ? H A GLN 21 ? ? 1.55 37 13 O A CYS 22 ? ? H A CYS 26 ? ? 1.45 38 13 O A GLU 9 ? ? H A TYR 11 ? ? 1.47 39 13 O A LEU 18 ? ? H A GLN 21 ? ? 1.56 40 14 O A CYS 22 ? ? H A CYS 26 ? ? 1.40 41 14 O A GLU 9 ? ? H A TYR 11 ? ? 1.48 42 15 O A CYS 22 ? ? H A CYS 26 ? ? 1.43 43 15 O A GLU 9 ? ? H A TYR 11 ? ? 1.50 44 15 O A LEU 18 ? ? H A GLN 21 ? ? 1.52 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 9 ? ? -68.30 -85.12 2 1 ASN A 10 ? ? 61.39 -57.81 3 1 PRO A 12 ? ? -47.97 -176.29 4 1 VAL A 13 ? ? -50.14 -9.94 5 1 CYS A 16 ? ? -51.47 -5.23 6 1 ASP A 29 ? ? -90.17 -61.70 7 1 HIS A 31 ? ? 66.80 61.14 8 1 ASP A 40 ? ? -103.03 -158.88 9 1 ARG A 43 ? ? 43.82 24.57 10 1 TYR A 51 ? ? -105.01 62.62 11 1 CYS A 52 ? ? -172.49 -167.73 12 1 GLU A 53 ? ? -105.16 75.35 13 2 GLU A 9 ? ? -68.37 -85.56 14 2 ASN A 10 ? ? 61.22 -58.18 15 2 PRO A 12 ? ? -48.40 -177.28 16 2 VAL A 13 ? ? -48.86 -10.30 17 2 CYS A 16 ? ? -51.54 -4.80 18 2 HIS A 31 ? ? 66.51 62.83 19 2 ASP A 40 ? ? -103.62 -159.44 20 2 ARG A 43 ? ? 42.58 23.41 21 2 TYR A 51 ? ? -102.41 61.88 22 2 CYS A 52 ? ? -172.56 -167.75 23 2 GLU A 53 ? ? -105.07 73.80 24 3 GLU A 9 ? ? -69.48 -83.15 25 3 ASN A 10 ? ? 60.84 -59.11 26 3 PRO A 12 ? ? -47.23 -176.39 27 3 VAL A 13 ? ? -46.92 -11.09 28 3 CYS A 16 ? ? -52.11 -4.17 29 3 ALA A 19 ? ? -47.16 -12.94 30 3 ASP A 29 ? ? -91.55 -62.32 31 3 ASP A 40 ? ? -103.50 -158.49 32 3 ARG A 43 ? ? 43.20 20.08 33 3 TYR A 51 ? ? -105.54 62.20 34 3 CYS A 52 ? ? -172.76 -167.63 35 3 GLU A 53 ? ? -106.60 74.06 36 4 GLU A 9 ? ? -68.34 -85.86 37 4 ASN A 10 ? ? 61.38 -57.89 38 4 PRO A 12 ? ? -48.40 -177.15 39 4 VAL A 13 ? ? -48.64 -10.17 40 4 CYS A 16 ? ? -51.48 -4.72 41 4 ASP A 29 ? ? -90.27 -61.97 42 4 HIS A 31 ? ? 67.06 60.28 43 4 ASP A 40 ? ? -103.42 -158.43 44 4 ARG A 43 ? ? 42.84 23.15 45 4 TYR A 51 ? ? -107.73 62.03 46 4 CYS A 52 ? ? -171.00 -167.44 47 5 GLU A 9 ? ? -68.81 -85.50 48 5 ASN A 10 ? ? 61.77 -57.74 49 5 PRO A 12 ? ? -47.82 -176.32 50 5 VAL A 13 ? ? -50.35 -9.86 51 5 CYS A 16 ? ? -51.42 -5.27 52 5 ASP A 29 ? ? -90.10 -61.51 53 5 HIS A 31 ? ? 69.65 60.71 54 5 ASP A 40 ? ? -103.15 -159.74 55 5 ARG A 43 ? ? 43.70 24.83 56 5 TYR A 51 ? ? -107.46 62.20 57 5 CYS A 52 ? ? -170.56 -168.33 58 6 GLU A 9 ? ? -69.46 -81.79 59 6 ASN A 10 ? ? 60.47 -58.75 60 6 PRO A 12 ? ? -46.11 -176.04 61 6 VAL A 13 ? ? -47.44 -10.36 62 6 CYS A 16 ? ? -53.87 -4.67 63 6 ASP A 29 ? ? -92.04 -62.58 64 6 ASP A 40 ? ? -103.40 -162.94 65 6 ARG A 43 ? ? 43.83 25.02 66 6 TYR A 51 ? ? -106.56 62.20 67 6 CYS A 52 ? ? -172.89 -167.67 68 6 GLU A 53 ? ? -105.42 73.49 69 7 GLU A 9 ? ? -73.18 -81.77 70 7 ASN A 10 ? ? 61.07 -57.23 71 7 PRO A 12 ? ? -47.65 -176.13 72 7 VAL A 13 ? ? -49.32 -9.58 73 7 CYS A 16 ? ? -51.37 -5.48 74 7 ASP A 29 ? ? -91.36 -61.18 75 7 ASP A 40 ? ? -103.38 -156.29 76 7 ARG A 43 ? ? 43.14 23.40 77 7 TYR A 51 ? ? -109.86 62.41 78 7 CYS A 52 ? ? -171.98 -167.70 79 7 GLU A 53 ? ? -104.80 75.57 80 8 GLU A 9 ? ? -69.15 -82.94 81 8 ASN A 10 ? ? 60.27 -59.76 82 8 PRO A 12 ? ? -47.56 -176.50 83 8 VAL A 13 ? ? -47.15 -11.13 84 8 CYS A 16 ? ? -51.82 -4.37 85 8 ASP A 29 ? ? -90.77 -61.64 86 8 HIS A 31 ? ? 66.24 61.02 87 8 ASP A 40 ? ? -104.15 -160.23 88 8 ARG A 43 ? ? 44.57 18.45 89 8 TYR A 51 ? ? -106.01 62.28 90 8 CYS A 52 ? ? -172.51 -167.54 91 8 GLU A 53 ? ? -100.50 75.08 92 9 GLU A 9 ? ? -68.66 -86.03 93 9 ASN A 10 ? ? 61.63 -57.68 94 9 PRO A 12 ? ? -48.28 -177.11 95 9 VAL A 13 ? ? -48.93 -10.19 96 9 CYS A 16 ? ? -51.59 -4.67 97 9 ALA A 19 ? ? -48.64 -12.89 98 9 HIS A 31 ? ? 70.10 61.39 99 9 ASP A 40 ? ? -104.10 -153.32 100 9 ARG A 43 ? ? 45.06 17.97 101 9 TYR A 51 ? ? -108.64 61.79 102 9 CYS A 52 ? ? -170.57 -167.60 103 9 GLU A 53 ? ? -100.72 72.92 104 10 GLU A 9 ? ? -68.63 -84.72 105 10 ASN A 10 ? ? 60.85 -57.46 106 10 PRO A 12 ? ? -48.12 -177.27 107 10 VAL A 13 ? ? -49.02 -10.17 108 10 CYS A 16 ? ? -51.55 -4.53 109 10 ALA A 19 ? ? -48.63 -13.47 110 10 HIS A 31 ? ? 66.12 64.39 111 10 ASP A 40 ? ? -102.30 -157.47 112 10 ARG A 43 ? ? 43.10 22.36 113 10 TYR A 51 ? ? -101.18 61.32 114 10 CYS A 52 ? ? -172.39 -167.24 115 10 GLU A 53 ? ? -107.11 73.31 116 11 GLU A 9 ? ? -69.60 -81.64 117 11 ASN A 10 ? ? 60.49 -59.33 118 11 PRO A 12 ? ? -46.15 -176.58 119 11 VAL A 13 ? ? -47.94 -10.89 120 11 CYS A 16 ? ? -51.46 -7.63 121 11 ASP A 29 ? ? -91.75 -62.29 122 11 ASP A 40 ? ? -103.24 -162.66 123 11 ARG A 43 ? ? 45.98 23.58 124 11 TYR A 51 ? ? -107.52 62.00 125 11 CYS A 52 ? ? -172.43 -167.91 126 11 GLU A 53 ? ? -104.41 73.71 127 12 GLU A 9 ? ? -67.73 -85.55 128 12 ASN A 10 ? ? 61.01 -58.04 129 12 PRO A 12 ? ? -48.50 -177.12 130 12 VAL A 13 ? ? -49.60 -9.81 131 12 CYS A 16 ? ? -51.31 -4.90 132 12 HIS A 31 ? ? 65.65 65.00 133 12 ASP A 40 ? ? -104.14 -162.41 134 12 ARG A 43 ? ? 46.27 18.93 135 12 TYR A 51 ? ? -100.36 61.94 136 12 CYS A 52 ? ? -173.18 -167.34 137 12 GLU A 53 ? ? -108.50 73.35 138 13 GLU A 9 ? ? -68.26 -84.62 139 13 ASN A 10 ? ? 61.01 -57.91 140 13 PRO A 12 ? ? -47.84 -176.33 141 13 VAL A 13 ? ? -50.34 -9.86 142 13 CYS A 16 ? ? -51.11 -5.65 143 13 ASP A 29 ? ? -90.22 -61.82 144 13 HIS A 31 ? ? 66.09 61.84 145 13 ASP A 40 ? ? -103.70 -159.46 146 13 ARG A 43 ? ? 45.46 21.31 147 13 TYR A 51 ? ? -104.94 61.41 148 13 CYS A 52 ? ? -171.82 -167.61 149 14 GLU A 9 ? ? -66.65 -83.05 150 14 ASN A 10 ? ? 59.82 -59.37 151 14 PRO A 12 ? ? -46.14 -176.58 152 14 VAL A 13 ? ? -48.81 -10.27 153 14 CYS A 16 ? ? -50.21 -5.46 154 14 ALA A 19 ? ? -48.99 -12.44 155 14 ASP A 29 ? ? -90.71 -61.25 156 14 HIS A 31 ? ? 67.96 62.03 157 14 ASP A 40 ? ? -104.01 -160.87 158 14 ARG A 43 ? ? 44.05 21.92 159 14 TYR A 51 ? ? -105.10 62.39 160 14 CYS A 52 ? ? -172.96 -167.69 161 14 GLU A 53 ? ? -108.56 73.41 162 15 GLU A 9 ? ? -67.12 -86.31 163 15 ASN A 10 ? ? 61.90 -58.13 164 15 PRO A 12 ? ? -49.21 -174.08 165 15 VAL A 13 ? ? -49.66 -9.80 166 15 CYS A 16 ? ? -48.35 -10.08 167 15 HIS A 31 ? ? 67.52 60.38 168 15 ARG A 43 ? ? 43.75 26.31 169 15 TYR A 51 ? ? -107.82 64.20 170 15 CYS A 52 ? ? -171.03 -168.27 171 15 GLU A 53 ? ? -102.71 76.33 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A TYR 54 ? O ? A TYR 53 O 2 2 Y 1 A TYR 54 ? O ? A TYR 53 O 3 3 Y 1 A TYR 54 ? O ? A TYR 53 O 4 4 Y 1 A TYR 54 ? O ? A TYR 53 O 5 5 Y 1 A TYR 54 ? O ? A TYR 53 O 6 6 Y 1 A TYR 54 ? O ? A TYR 53 O 7 7 Y 1 A TYR 54 ? O ? A TYR 53 O 8 8 Y 1 A TYR 54 ? O ? A TYR 53 O 9 9 Y 1 A TYR 54 ? O ? A TYR 53 O 10 10 Y 1 A TYR 54 ? O ? A TYR 53 O 11 11 Y 1 A TYR 54 ? O ? A TYR 53 O 12 12 Y 1 A TYR 54 ? O ? A TYR 53 O 13 13 Y 1 A TYR 54 ? O ? A TYR 53 O 14 14 Y 1 A TYR 54 ? O ? A TYR 53 O 15 15 Y 1 A TYR 54 ? O ? A TYR 53 O #