HEADER    DNA                                     18-SEP-12   2LYG              
TITLE     FUC_TBA                                                               
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA (5'-D(P*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-  
COMPND   3 3');                                                                 
COMPND   4 CHAIN: A;                                                            
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES                                                       
KEYWDS    CARBOHYDRATE-DNA INTERACTION, G-QUADRUPLEX STRUCTURE, DNA             
EXPDTA    SOLUTION NMR                                                          
NUMMDL    12                                                                    
AUTHOR    I.GOMEZ-PINTO,E.VENGUT-CLIMENT,R.LUCAS,A.AVIO,R.ERITJA,C.GONZALEZ-    
AUTHOR   2 IBAEZ,J.MORALES                                                      
REVDAT   4   01-MAY-24 2LYG    1       HETSYN                                   
REVDAT   3   29-JUL-20 2LYG    1       REMARK LINK   SITE   ATOM                
REVDAT   2   19-MAR-14 2LYG    1       JRNL                                     
REVDAT   1   29-JAN-14 2LYG    0                                                
JRNL        AUTH   I.GOMEZ-PINTO,E.VENGUT-CLIMENT,R.LUCAS,A.AVINO,R.ERITJA,     
JRNL        AUTH 2 C.GONZALEZ,J.C.MORALES                                       
JRNL        TITL   CARBOHYDRATE-DNA INTERACTIONS AT G-QUADRUPLEXES: FOLDING AND 
JRNL        TITL 2 STABILITY CHANGES BY ATTACHING SUGARS AT THE 5'-END.         
JRNL        REF    CHEMISTRY                     V.  19  1920 2013              
JRNL        REFN                   ISSN 0947-6539                               
JRNL        PMID   23315826                                                     
JRNL        DOI    10.1002/CHEM.201203902                                       
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : AMBER                                                
REMARK   3   AUTHORS     : CASE, DARDEN, CHEATHAM, III, SIMMERLING, WANG,       
REMARK   3                 DUKE, LUO, ... AND KOLLMAN                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2LYG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-SEP-12.                  
REMARK 100 THE DEPOSITION ID IS D_1000102989.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 279.6                              
REMARK 210  PH                             : 7.0                                
REMARK 210  IONIC STRENGTH                 : NULL                               
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 1 MM DNA (5'                       
REMARK 210  -D(P*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3'), 1 MM         
REMARK 210  SUGAR (ALPHA-D-FUCOSE), 90% H2O/10% D2O                             
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-1H NOESY; 2D 1H-1H TOCSY;    
REMARK 210                                   2D 1H-1H COSY                      
REMARK 210  SPECTROMETER FIELD STRENGTH    : 600 MHZ; 800 MHZ                   
REMARK 210  SPECTROMETER MODEL             : AVANCE                             
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NULL                               
REMARK 210   METHOD USED                   : MOLECULAR DYNAMICS                 
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 12                                 
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 12                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LOWEST         
REMARK 210                                   ENERGY                             
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING NOE DATA                  
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500  1  DG A   1   O4' -  C1' -  N9  ANGL. DEV. =   7.8 DEGREES          
REMARK 500  1  DG A   1   C4  -  C5  -  N7  ANGL. DEV. =   2.4 DEGREES          
REMARK 500  1  DG A   1   C5  -  N7  -  C8  ANGL. DEV. =  -3.0 DEGREES          
REMARK 500  1  DG A   2   C5  -  N7  -  C8  ANGL. DEV. =  -3.2 DEGREES          
REMARK 500  1  DT A   3   O4' -  C1' -  N1  ANGL. DEV. =   5.4 DEGREES          
REMARK 500  1  DT A   3   N3  -  C2  -  O2  ANGL. DEV. =  -5.0 DEGREES          
REMARK 500  1  DT A   3   C6  -  C5  -  C7  ANGL. DEV. =  -3.9 DEGREES          
REMARK 500  1  DT A   4   C1' -  O4' -  C4' ANGL. DEV. =  -7.7 DEGREES          
REMARK 500  1  DT A   4   O4' -  C1' -  C2' ANGL. DEV. =  -5.5 DEGREES          
REMARK 500  1  DT A   4   O4' -  C1' -  N1  ANGL. DEV. =   3.6 DEGREES          
REMARK 500  1  DG A   5   O4' -  C1' -  N9  ANGL. DEV. =   3.1 DEGREES          
REMARK 500  1  DG A   6   O4' -  C1' -  N9  ANGL. DEV. =   5.6 DEGREES          
REMARK 500  1  DT A   7   C6  -  C5  -  C7  ANGL. DEV. =  -3.7 DEGREES          
REMARK 500  1  DT A   9   O4' -  C1' -  N1  ANGL. DEV. =   4.5 DEGREES          
REMARK 500  1  DT A   9   C6  -  C5  -  C7  ANGL. DEV. =  -4.2 DEGREES          
REMARK 500  1  DG A  10   O4' -  C1' -  N9  ANGL. DEV. =   4.4 DEGREES          
REMARK 500  1  DG A  10   N3  -  C4  -  N9  ANGL. DEV. =   3.8 DEGREES          
REMARK 500  1  DT A  12   O4' -  C4' -  C3' ANGL. DEV. =   4.0 DEGREES          
REMARK 500  1  DT A  12   C6  -  C5  -  C7  ANGL. DEV. =  -4.2 DEGREES          
REMARK 500  1  DT A  13   O4' -  C1' -  N1  ANGL. DEV. =   5.0 DEGREES          
REMARK 500  1  DG A  14   O4' -  C1' -  N9  ANGL. DEV. =   5.5 DEGREES          
REMARK 500  1  DG A  14   C5  -  N7  -  C8  ANGL. DEV. =  -3.1 DEGREES          
REMARK 500  1  DG A  15   O4' -  C1' -  N9  ANGL. DEV. =   2.2 DEGREES          
REMARK 500  1  DG A  15   C5  -  N7  -  C8  ANGL. DEV. =  -3.2 DEGREES          
REMARK 500  2  DG A   1   O4' -  C1' -  N9  ANGL. DEV. =   7.2 DEGREES          
REMARK 500  2  DG A   1   C4  -  C5  -  N7  ANGL. DEV. =   2.4 DEGREES          
REMARK 500  2  DG A   1   C5  -  N7  -  C8  ANGL. DEV. =  -3.2 DEGREES          
REMARK 500  2  DT A   3   O4' -  C1' -  N1  ANGL. DEV. =   6.2 DEGREES          
REMARK 500  2  DT A   3   N3  -  C2  -  O2  ANGL. DEV. =  -4.5 DEGREES          
REMARK 500  2  DT A   3   C6  -  C5  -  C7  ANGL. DEV. =  -4.1 DEGREES          
REMARK 500  2  DT A   4   C1' -  O4' -  C4' ANGL. DEV. =  -6.5 DEGREES          
REMARK 500  2  DT A   4   O4' -  C1' -  N1  ANGL. DEV. =   2.0 DEGREES          
REMARK 500  2  DG A   5   C3' -  C2' -  C1' ANGL. DEV. =  -4.8 DEGREES          
REMARK 500  2  DG A   5   O4' -  C1' -  N9  ANGL. DEV. =   2.7 DEGREES          
REMARK 500  2  DG A   6   O4' -  C1' -  N9  ANGL. DEV. =   4.0 DEGREES          
REMARK 500  2  DT A   7   C6  -  C5  -  C7  ANGL. DEV. =  -4.3 DEGREES          
REMARK 500  2  DT A   9   O4' -  C1' -  N1  ANGL. DEV. =   4.4 DEGREES          
REMARK 500  2  DG A  10   O4' -  C1' -  N9  ANGL. DEV. =   3.1 DEGREES          
REMARK 500  2  DG A  10   N3  -  C4  -  N9  ANGL. DEV. =   3.8 DEGREES          
REMARK 500  2  DT A  13   O4' -  C1' -  N1  ANGL. DEV. =   6.8 DEGREES          
REMARK 500  2  DG A  14   O4' -  C1' -  N9  ANGL. DEV. =   5.4 DEGREES          
REMARK 500  2  DG A  15   O4' -  C1' -  N9  ANGL. DEV. =   2.3 DEGREES          
REMARK 500  2  DG A  15   C5  -  N7  -  C8  ANGL. DEV. =  -3.4 DEGREES          
REMARK 500  3  DG A   1   O4' -  C1' -  C2' ANGL. DEV. =  -5.1 DEGREES          
REMARK 500  3  DG A   1   O4' -  C1' -  N9  ANGL. DEV. =   8.4 DEGREES          
REMARK 500  3  DG A   1   C4  -  C5  -  N7  ANGL. DEV. =   2.8 DEGREES          
REMARK 500  3  DG A   1   C5  -  N7  -  C8  ANGL. DEV. =  -3.8 DEGREES          
REMARK 500  3  DG A   2   C5  -  N7  -  C8  ANGL. DEV. =  -3.0 DEGREES          
REMARK 500  3  DT A   3   O4' -  C1' -  N1  ANGL. DEV. =   4.5 DEGREES          
REMARK 500  3  DT A   3   N3  -  C2  -  O2  ANGL. DEV. =  -4.4 DEGREES          
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     277 ANGLE DEVIATIONS.                             
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500  1  DG A   2         0.07    SIDE CHAIN                              
REMARK 500  1  DT A   4         0.06    SIDE CHAIN                              
REMARK 500  1  DG A  10         0.09    SIDE CHAIN                              
REMARK 500  2  DG A   2         0.09    SIDE CHAIN                              
REMARK 500  2  DT A   4         0.07    SIDE CHAIN                              
REMARK 500  2  DT A   9         0.08    SIDE CHAIN                              
REMARK 500  2  DG A  10         0.11    SIDE CHAIN                              
REMARK 500  2  DG A  14         0.07    SIDE CHAIN                              
REMARK 500  3  DG A   2         0.07    SIDE CHAIN                              
REMARK 500  3  DT A   3         0.07    SIDE CHAIN                              
REMARK 500  3  DT A   4         0.07    SIDE CHAIN                              
REMARK 500  3  DT A   9         0.08    SIDE CHAIN                              
REMARK 500  3  DG A  10         0.11    SIDE CHAIN                              
REMARK 500  3  DT A  13         0.09    SIDE CHAIN                              
REMARK 500  4  DG A   2         0.06    SIDE CHAIN                              
REMARK 500  4  DT A   4         0.08    SIDE CHAIN                              
REMARK 500  4  DG A  10         0.09    SIDE CHAIN                              
REMARK 500  5  DG A   2         0.07    SIDE CHAIN                              
REMARK 500  5  DT A   4         0.08    SIDE CHAIN                              
REMARK 500  5  DG A  10         0.07    SIDE CHAIN                              
REMARK 500  6  DG A   2         0.07    SIDE CHAIN                              
REMARK 500  6  DT A   3         0.07    SIDE CHAIN                              
REMARK 500  6  DT A   4         0.06    SIDE CHAIN                              
REMARK 500  6  DT A   7         0.07    SIDE CHAIN                              
REMARK 500  6  DG A  10         0.11    SIDE CHAIN                              
REMARK 500  6  DG A  11         0.07    SIDE CHAIN                              
REMARK 500  6  DT A  13         0.07    SIDE CHAIN                              
REMARK 500  7  DG A   2         0.07    SIDE CHAIN                              
REMARK 500  7  DT A   4         0.06    SIDE CHAIN                              
REMARK 500  7  DG A  10         0.10    SIDE CHAIN                              
REMARK 500  8  DG A   2         0.07    SIDE CHAIN                              
REMARK 500  8  DG A   5         0.05    SIDE CHAIN                              
REMARK 500  8  DG A  10         0.09    SIDE CHAIN                              
REMARK 500  9  DG A   2         0.06    SIDE CHAIN                              
REMARK 500  9  DT A   4         0.08    SIDE CHAIN                              
REMARK 500  9  DG A  10         0.09    SIDE CHAIN                              
REMARK 500  9  DT A  13         0.07    SIDE CHAIN                              
REMARK 500 10  DG A   2         0.07    SIDE CHAIN                              
REMARK 500 10  DG A  10         0.10    SIDE CHAIN                              
REMARK 500 10  DG A  14         0.08    SIDE CHAIN                              
REMARK 500 11  DG A   1         0.06    SIDE CHAIN                              
REMARK 500 11  DG A   2         0.08    SIDE CHAIN                              
REMARK 500 11  DG A  10         0.10    SIDE CHAIN                              
REMARK 500 11  DT A  13         0.08    SIDE CHAIN                              
REMARK 500 11  DG A  14         0.07    SIDE CHAIN                              
REMARK 500 12  DG A   1         0.06    SIDE CHAIN                              
REMARK 500 12  DT A   4         0.09    SIDE CHAIN                              
REMARK 500 12  DG A  10         0.12    SIDE CHAIN                              
REMARK 500 12  DT A  13         0.07    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 18724   RELATED DB: BMRB                                 
DBREF  2LYG A    1    15  PDB    2LYG     2LYG             1     15             
SEQRES   1 A   15   DG  DG  DT  DT  DG  DG  DT  DG  DT  DG  DG  DT  DT          
SEQRES   2 A   15   DG  DG                                                      
HET    1CF  A 101      29                                                       
HETNAM     1CF 2-HYDROXYETHYL 6-DEOXY-BETA-L-GALACTOPYRANOSIDE                  
HETSYN     1CF 2-HYDROXYETHYL 6-DEOXY-BETA-L-GALACTOSIDE; 2-                    
HETSYN   2 1CF  HYDROXYETHYL 6-DEOXY-L-GALACTOSIDE; 2-HYDROXYETHYL 6-           
HETSYN   3 1CF  DEOXY-GALACTOSIDE                                               
FORMUL   2  1CF    C8 H16 O6                                                    
LINK         P    DG A   1                 O11 1CF A 101     1555   1555  1.60  
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1