HEADER PROTEIN BINDING/PROTEIN BINDING 06-NOV-12 2M0V TITLE COMPLEX STRUCTURE OF C-TERMINAL CFTR PEPTIDE AND EXTENDED PDZ2 DOMAIN TITLE 2 FROM NHERF1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NA(+)/H(+) EXCHANGE REGULATORY COFACTOR NHE-RF1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PDZ2 DOMAIN; COMPND 5 SYNONYM: NHERF-1, EZRIN-RADIXIN-MOESIN-BINDING PHOSPHOPROTEIN 50, COMPND 6 EBP50, REGULATORY COFACTOR OF NA(+)/H(+) EXCHANGER, SODIUM-HYDROGEN COMPND 7 EXCHANGER REGULATORY FACTOR 1, SOLUTE CARRIER FAMILY 9 ISOFORM A3 COMPND 8 REGULATORY FACTOR 1; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: C-TERMINAL CFTR PEPTIDE; COMPND 12 CHAIN: B; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SLC9A3R1, NHERF, NHERF1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET151/D-TOPO; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES KEYWDS PDZ DOMAIN, PROTEIN BINDING-PROTEIN BINDING COMPLEX EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.BHATTACHARYA,J.H.JU,D.COWBURN,Z.BU REVDAT 5 01-MAY-24 2M0V 1 REMARK SEQADV REVDAT 4 17-JUL-13 2M0V 1 JRNL REVDAT 3 26-JUN-13 2M0V 1 JRNL REVDAT 2 01-MAY-13 2M0V 1 JRNL REVDAT 1 24-APR-13 2M0V 0 JRNL AUTH S.BHATTACHARYA,J.H.JU,N.ORLOVA,J.A.KHAJEH,D.COWBURN,Z.BU JRNL TITL LIGAND-INDUCED DYNAMIC CHANGES IN EXTENDED PDZ DOMAINS FROM JRNL TITL 2 NHERF1. JRNL REF J.MOL.BIOL. V. 425 2509 2013 JRNL REFN ISSN 0022-2836 JRNL PMID 23583913 JRNL DOI 10.1016/J.JMB.2013.04.001 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN 2.1, ARIA 2.2 REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), LINGE, O'DONOGHUE AND REMARK 3 NILGES (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2M0V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000103067. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 288 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 400 UM [U-99% 13C; U-99% 15N] REMARK 210 PDZ2, 20 MM TRIS, 150 MM SODIUM REMARK 210 CHLORIDE, 0.5 MM DTT, 0.5 MM REMARK 210 EDTA, 688 UM CFTR, 90% H2O/10% REMARK 210 D2O; 200 UM [U-99% 13C; U-99% REMARK 210 15N] PDZ2, 20 MM TRIS, 150 MM REMARK 210 SODIUM CHLORIDE, 0.5 MM DTT, 0.5 REMARK 210 MM EDTA, 275 UM CFTR, 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D 1H-15N NOESY; 3D 1H- REMARK 210 13C NOESY ALIPHATIC; 3D 1H-13C REMARK 210 NOESY AROMATIC; 3D HNCA; 3D REMARK 210 CBCA(CO)NH; 3D HBHA(CO)NH; 3D REMARK 210 HNCACB; 3D HNCO; 3D H(CCO)NH; 3D REMARK 210 HCCH-TOCSY; 2D 13C,15N F1,F2- REMARK 210 FILTERED TOCSY; 2D 13C,15N F1,F2- REMARK 210 FILTERED NOESY; 2D 13C,15N F2- REMARK 210 FILTERED NOESY; 3D 13C,15N F1- REMARK 210 FILTERED 13C-EDITED NOESY-HSQC; REMARK 210 3D 13C,15N F1-FILTERED 15N- REMARK 210 EDITED NOESY-HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ; 800 MHZ; 700 MHZ; 600 REMARK 210 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 2.1, CARA 1.5, CYANA REMARK 210 2.1, TALOS 1.01 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 201 HG CYS A 206 1.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 161 -80.06 -87.49 REMARK 500 1 LYS A 172 47.49 -95.79 REMARK 500 1 SER A 173 -48.43 -162.84 REMARK 500 1 PRO A 246 60.72 -69.26 REMARK 500 1 THR A 260 39.51 -71.24 REMARK 500 1 SER A 269 169.45 70.87 REMARK 500 1 ASP B 2 -173.72 61.80 REMARK 500 2 PHE A 147 45.00 -88.14 REMARK 500 2 SER A 162 22.80 -152.66 REMARK 500 2 ASP A 185 70.00 -100.12 REMARK 500 2 MET A 207 51.33 -97.75 REMARK 500 2 THR A 260 63.97 -103.26 REMARK 500 2 LYS A 266 90.83 60.96 REMARK 500 2 GLU A 267 96.36 70.06 REMARK 500 3 SER A 162 35.77 -144.49 REMARK 500 3 GLN A 196 -8.82 76.92 REMARK 500 3 VAL A 257 134.47 63.67 REMARK 500 3 ASN A 261 -21.40 76.13 REMARK 500 3 ASN A 268 91.63 63.73 REMARK 500 4 ARG A 151 127.63 68.54 REMARK 500 4 PRO A 161 -75.04 -70.95 REMARK 500 4 ASP A 185 72.23 -107.43 REMARK 500 4 GLU A 208 47.27 -77.15 REMARK 500 4 PHE A 259 77.41 -108.34 REMARK 500 4 ASP B 2 -179.67 70.46 REMARK 500 5 SER A 162 28.24 -148.14 REMARK 500 5 ASP A 185 71.68 -105.84 REMARK 500 5 MET A 207 47.11 -90.40 REMARK 500 5 VAL A 257 82.75 62.42 REMARK 500 5 ASP B 2 -81.33 -62.88 REMARK 500 6 PRO A 161 -74.82 -74.67 REMARK 500 6 ASP A 185 71.27 -110.88 REMARK 500 6 GLN A 196 -7.02 76.35 REMARK 500 6 THR A 260 45.48 -106.36 REMARK 500 6 ASP B 2 -179.70 68.23 REMARK 500 7 SER A 162 28.72 -161.60 REMARK 500 7 ASP A 185 65.44 -108.57 REMARK 500 7 GLN A 196 -2.80 77.42 REMARK 500 7 MET A 207 31.16 -81.31 REMARK 500 7 LYS A 210 -50.18 65.03 REMARK 500 7 PRO A 256 86.64 -63.40 REMARK 500 7 THR A 260 78.63 -106.34 REMARK 500 7 GLU A 267 133.15 71.51 REMARK 500 7 ASN A 268 -68.67 69.59 REMARK 500 7 SER A 269 79.89 53.02 REMARK 500 8 PRO A 161 -73.45 -62.01 REMARK 500 8 SER A 162 34.33 -154.39 REMARK 500 8 ALA A 195 25.90 -79.26 REMARK 500 8 MET A 207 44.93 -94.90 REMARK 500 8 GLU A 208 -93.38 -84.33 REMARK 500 REMARK 500 THIS ENTRY HAS 146 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18826 RELATED DB: BMRB REMARK 900 RELATED ID: 2M0T RELATED DB: PDB REMARK 900 RELATED ID: 2M0U RELATED DB: PDB DBREF 2M0V A 150 270 UNP O14745 NHRF1_HUMAN 150 270 DBREF 2M0V B 1 5 PDB 2M0V 2M0V 1 5 SEQADV 2M0V GLY A 143 UNP O14745 EXPRESSION TAG SEQADV 2M0V ILE A 144 UNP O14745 EXPRESSION TAG SEQADV 2M0V ASP A 145 UNP O14745 EXPRESSION TAG SEQADV 2M0V PRO A 146 UNP O14745 EXPRESSION TAG SEQADV 2M0V PHE A 147 UNP O14745 EXPRESSION TAG SEQADV 2M0V THR A 148 UNP O14745 EXPRESSION TAG SEQADV 2M0V MET A 149 UNP O14745 EXPRESSION TAG SEQRES 1 A 128 GLY ILE ASP PRO PHE THR MET LEU ARG PRO ARG LEU CYS SEQRES 2 A 128 THR MET LYS LYS GLY PRO SER GLY TYR GLY PHE ASN LEU SEQRES 3 A 128 HIS SER ASP LYS SER LYS PRO GLY GLN PHE ILE ARG SER SEQRES 4 A 128 VAL ASP PRO ASP SER PRO ALA GLU ALA SER GLY LEU ARG SEQRES 5 A 128 ALA GLN ASP ARG ILE VAL GLU VAL ASN GLY VAL CYS MET SEQRES 6 A 128 GLU GLY LYS GLN HIS GLY ASP VAL VAL SER ALA ILE ARG SEQRES 7 A 128 ALA GLY GLY ASP GLU THR LYS LEU LEU VAL VAL ASP ARG SEQRES 8 A 128 GLU THR ASP GLU PHE PHE LYS LYS CYS ARG VAL ILE PRO SEQRES 9 A 128 SER GLN GLU HIS LEU ASN GLY PRO LEU PRO VAL PRO PHE SEQRES 10 A 128 THR ASN GLY GLU ILE GLN LYS GLU ASN SER ARG SEQRES 1 B 5 GLN ASP THR ARG LEU HELIX 1 1 SER A 186 SER A 191 1 6 HELIX 2 2 GLN A 211 ALA A 221 1 11 HELIX 3 3 ASP A 232 CYS A 242 1 11 HELIX 4 4 SER A 247 GLY A 253 1 7 SHEET 1 A 4 ARG A 153 LYS A 158 0 SHEET 2 A 4 GLU A 225 VAL A 231 -1 O LEU A 228 N CYS A 155 SHEET 3 A 4 ARG A 198 VAL A 202 -1 N GLU A 201 O LEU A 229 SHEET 4 A 4 VAL A 205 CYS A 206 -1 O VAL A 205 N VAL A 202 SHEET 1 B 3 PHE A 178 VAL A 182 0 SHEET 2 B 3 PHE A 166 HIS A 169 -1 N ASN A 167 O ARG A 180 SHEET 3 B 3 THR B 3 ARG B 4 -1 O THR B 3 N LEU A 168 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1