data_2M1V # _entry.id 2M1V # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2M1V pdb_00002m1v 10.2210/pdb2m1v/pdb RCSB RCSB103103 ? ? BMRB 18881 ? 10.13018/BMR18881 WWPDB D_1000103103 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-06-11 2 'Structure model' 1 1 2014-07-23 3 'Structure model' 1 2 2014-08-06 4 'Structure model' 1 3 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_nmr_software 5 4 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2M1V _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-12-07 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 2K65 PDB . unspecified 2K66 PDB . unspecified 18881 BMRB . unspecified 2M23 PDB . unspecified 2M24 PDB . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Skilandat, M.' 1 'Sigel, R.K.O.' 2 # _citation.id primary _citation.title ;The Role of Mg(II) in DNA Cleavage Site Recognition in Group II Intron Ribozymes: SOLUTION STRUCTURE AND METAL ION BINDING SITES OF THE RNADNA COMPLEX. ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 289 _citation.page_first 20650 _citation.page_last 20663 _citation.year 2014 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24895129 _citation.pdbx_database_id_DOI 10.1074/jbc.M113.542381 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Skilandat, M.' 1 ? primary 'Sigel, R.K.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (29-MER)' 9301.547 1 ? ? "d3'EBS1" ? 2 polymer syn "DNA_(5'-D(*CP*AP*GP*TP*GP*TP*C)-3')_" 2113.410 1 ? ? dIBS1 ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GGAGUAUGUAUUGGCACUGAGCAUACUCC GGAGUAUGUAUUGGCACUGAGCAUACUCC A ? 2 polydeoxyribonucleotide no no '(DC)(DA)(DG)(DT)(DG)(DT)(DC)' CAGTGTC B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 A n 1 4 G n 1 5 U n 1 6 A n 1 7 U n 1 8 G n 1 9 U n 1 10 A n 1 11 U n 1 12 U n 1 13 G n 1 14 G n 1 15 C n 1 16 A n 1 17 C n 1 18 U n 1 19 G n 1 20 A n 1 21 G n 1 22 C n 1 23 A n 1 24 U n 1 25 A n 1 26 C n 1 27 U n 1 28 C n 1 29 C n 2 1 DC n 2 2 DA n 2 3 DG n 2 4 DT n 2 5 DG n 2 6 DT n 2 7 DC n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? 'Saccharomyces cerevisiae' ? 4932 'in vitro transcription from a synthetic double-stranded DNA template using T7 RNA Polymerase' 2 1 sample ? ? 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 A 3 3 3 A A A . n A 1 4 G 4 4 4 G G A . n A 1 5 U 5 5 5 U U A . n A 1 6 A 6 6 6 A A A . n A 1 7 U 7 7 7 U U A . n A 1 8 G 8 8 8 G G A . n A 1 9 U 9 9 9 U U A . n A 1 10 A 10 10 10 A A A . n A 1 11 U 11 11 11 U U A . n A 1 12 U 12 12 12 U U A . n A 1 13 G 13 13 13 G G A . n A 1 14 G 14 14 14 G G A . n A 1 15 C 15 15 15 C C A . n A 1 16 A 16 16 16 A A A . n A 1 17 C 17 17 17 C C A . n A 1 18 U 18 18 18 U U A . n A 1 19 G 19 19 19 G G A . n A 1 20 A 20 20 20 A A A . n A 1 21 G 21 21 21 G G A . n A 1 22 C 22 22 22 C C A . n A 1 23 A 23 23 23 A A A . n A 1 24 U 24 24 24 U U A . n A 1 25 A 25 25 25 A A A . n A 1 26 C 26 26 26 C C A . n A 1 27 U 27 27 27 U U A . n A 1 28 C 28 28 28 C C A . n A 1 29 C 29 29 29 C C A . n B 2 1 DC 1 59 59 DC DC B . n B 2 2 DA 2 60 60 DA DA B . n B 2 3 DG 3 61 61 DG DG B . n B 2 4 DT 4 62 62 DT DT B . n B 2 5 DG 5 63 63 DG DG B . n B 2 6 DT 6 64 64 DT DT B . n B 2 7 DC 7 65 65 DC DC B . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2M1V _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2M1V _struct.title ;NMR solution structure of the d3'-hairpin from the Sc.ai5gamma group II intron including the EBS1:dIBS1 RNA:DNA hybrid ; _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2M1V _struct_keywords.pdbx_keywords DNA/RNA _struct_keywords.text 'RNA, DNA, ribozyme, group II intron, hybrid, reverse splicing, retrohoming, DNA-RNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 PDB 2M1V 2M1V 1 ? GGAGUAUGUAUUGGCACUGAGCAUACUCC ? 2 PDB 2M1V 2M1V 2 ? CAGTGTC ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2M1V A 1 ? 29 ? 2M1V 1 ? 29 ? 1 29 2 2 2M1V B 1 ? 7 ? 2M1V 59 ? 65 ? 59 65 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 896 ? 1 MORE -4.0 ? 1 'SSA (A^2)' 6264 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 28 N4 ? ? A G 1 A C 28 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog2 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 29 N3 ? ? A G 1 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 29 O2 ? ? A G 1 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 29 N4 ? ? A G 1 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 28 N3 ? ? A G 2 A C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 28 O2 ? ? A G 2 A C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 28 N4 ? ? A G 2 A C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A A 3 N1 ? ? ? 1_555 A U 27 N3 ? ? A A 3 A U 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A A 3 N6 ? ? ? 1_555 A U 27 O4 ? ? A A 3 A U 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 26 N3 ? ? A G 4 A C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 26 O2 ? ? A G 4 A C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 26 N4 ? ? A G 4 A C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A U 5 N3 ? ? ? 1_555 A A 25 N1 ? ? A U 5 A A 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A U 5 O4 ? ? ? 1_555 A A 25 N6 ? ? A U 5 A A 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A A 6 N1 ? ? ? 1_555 A U 24 N3 ? ? A A 6 A U 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A A 6 N6 ? ? ? 1_555 A U 24 O4 ? ? A A 6 A U 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A U 7 N3 ? ? ? 1_555 A A 23 N1 ? ? A U 7 A A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A U 7 O4 ? ? ? 1_555 A A 23 N6 ? ? A U 7 A A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 22 N3 ? ? A G 8 A C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 22 O2 ? ? A G 8 A C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 22 N4 ? ? A G 8 A C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A U 9 N3 ? ? ? 1_555 A G 21 O6 ? ? A U 9 A G 21 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog23 hydrog ? ? A U 9 O2 ? ? ? 1_555 A G 21 N1 ? ? A U 9 A G 21 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog24 hydrog ? ? A A 10 N6 ? ? ? 1_555 A A 20 N1 ? ? A A 10 A A 20 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog25 hydrog ? ? A U 11 O4 ? ? ? 1_555 A C 17 N4 ? ? A U 11 A C 17 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog26 hydrog ? ? A U 12 N3 ? ? ? 1_555 B DA 2 N7 ? ? A U 12 B DA 60 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog27 hydrog ? ? A U 12 O4 ? ? ? 1_555 B DA 2 N6 ? ? A U 12 B DA 60 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog28 hydrog ? ? A G 13 N1 ? ? ? 1_555 B DC 7 N3 ? ? A G 13 B DC 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 13 N2 ? ? ? 1_555 B DC 7 O2 ? ? A G 13 B DC 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 13 O6 ? ? ? 1_555 B DC 7 N4 ? ? A G 13 B DC 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 14 N1 ? ? ? 1_555 B DT 6 O2 ? ? A G 14 B DT 64 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog32 hydrog ? ? A G 14 O6 ? ? ? 1_555 B DT 6 N3 ? ? A G 14 B DT 64 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog33 hydrog ? ? A C 15 N3 ? ? ? 1_555 B DG 5 N1 ? ? A C 15 B DG 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A C 15 N4 ? ? ? 1_555 B DG 5 O6 ? ? A C 15 B DG 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A C 15 O2 ? ? ? 1_555 B DG 5 N2 ? ? A C 15 B DG 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A A 16 N1 ? ? ? 1_555 B DT 4 N3 ? ? A A 16 B DT 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A A 16 N6 ? ? ? 1_555 B DT 4 O4 ? ? A A 16 B DT 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 17 N3 ? ? ? 1_555 B DG 3 N1 ? ? A C 17 B DG 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 17 N4 ? ? ? 1_555 B DG 3 O6 ? ? A C 17 B DG 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 17 O2 ? ? ? 1_555 B DG 3 N2 ? ? A C 17 B DG 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A U 18 N3 ? ? ? 1_555 B DA 2 N1 ? ? A U 18 B DA 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A U 18 O4 ? ? ? 1_555 B DA 2 N6 ? ? A U 18 B DA 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 19 N1 ? ? ? 1_555 B DC 1 N3 ? ? A G 19 B DC 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 19 N2 ? ? ? 1_555 B DC 1 O2 ? ? A G 19 B DC 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 19 O6 ? ? ? 1_555 B DC 1 N4 ? ? A G 19 B DC 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.48 2 1 "O2'" A G 1 ? ? H8 A G 2 ? ? 1.55 3 1 "O2'" A U 11 ? ? "H5''" A U 12 ? ? 1.58 4 2 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.46 5 2 "H2''" B DG 61 ? ? "O5'" B DT 62 ? ? 1.52 6 2 "O2'" A G 1 ? ? H8 A G 2 ? ? 1.57 7 2 "H2''" B DT 62 ? ? "O5'" B DG 63 ? ? 1.60 8 3 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.47 9 3 "O2'" A G 1 ? ? H8 A G 2 ? ? 1.54 10 4 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.46 11 5 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.47 12 5 "H2''" B DG 61 ? ? "O5'" B DT 62 ? ? 1.50 13 5 O2 A U 11 ? ? H5 B DC 59 ? ? 1.55 14 5 "H2''" B DT 62 ? ? "O5'" B DG 63 ? ? 1.58 15 6 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.47 16 6 "O2'" A G 1 ? ? H8 A G 2 ? ? 1.54 17 7 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.46 18 7 O2 A U 11 ? ? H5 B DC 59 ? ? 1.52 19 7 "O2'" A G 1 ? ? H8 A G 2 ? ? 1.56 20 7 "H2''" B DT 62 ? ? "O5'" B DG 63 ? ? 1.59 21 8 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.47 22 8 "O2'" A G 1 ? ? H8 A G 2 ? ? 1.59 23 9 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.46 24 10 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.46 25 10 "H2''" B DG 61 ? ? "O5'" B DT 62 ? ? 1.48 26 10 "O2'" A G 1 ? ? H8 A G 2 ? ? 1.58 27 11 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.46 28 11 "O2'" A G 1 ? ? H8 A G 2 ? ? 1.60 29 12 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.47 30 12 "O2'" A G 1 ? ? H8 A G 2 ? ? 1.59 31 13 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.46 32 13 "H2''" B DG 61 ? ? "O5'" B DT 62 ? ? 1.49 33 13 "H2'" A G 19 ? ? "O4'" A A 20 ? ? 1.57 34 14 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.44 35 14 "H2''" B DG 61 ? ? "O5'" B DT 62 ? ? 1.54 36 14 O2 A U 11 ? ? H5 B DC 59 ? ? 1.55 37 14 "H2''" B DT 62 ? ? "O5'" B DG 63 ? ? 1.58 38 15 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.40 39 15 "O2'" A G 1 ? ? H8 A G 2 ? ? 1.56 40 16 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.47 41 16 "O2'" A G 1 ? ? H8 A G 2 ? ? 1.56 42 17 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.48 43 17 "H2''" B DG 61 ? ? "O5'" B DT 62 ? ? 1.50 44 17 "O2'" A G 1 ? ? H8 A G 2 ? ? 1.54 45 17 "H2''" B DT 62 ? ? "O5'" B DG 63 ? ? 1.59 46 18 "H2'" A C 28 ? ? "O4'" A C 29 ? ? 1.47 47 18 "O2'" A G 1 ? ? H8 A G 2 ? ? 1.59 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 18 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2M1V _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation 0.2 _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation 5 _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation 0.2 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2M1V _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system ;0.6-0.9 mM RNA (29-MER), 0.7-1.0 mM DNA (5'-D(*CP*AP*GP*TP*GP*TP*C)-3'), 110 mM potassium chloride, 10 uM EDTA, 100% D2O ; 1 '100% D2O' ;0.6-0.9 mM RNA (29-MER), 0.7-1.0 mM DNA (5'-D(*CP*AP*GP*TP*GP*TP*C)-3'), 110 mM potassium chloride, 10 uM EDTA, 90% H2O/10% D2O ; 2 '90% H2O/10% D2O' ;0.6-0.9 mM [U-100% 13C; U-100% 15N] RNA (29-MER), 0.7-1.0 mM DNA (5'-D(*CP*AP*GP*TP*GP*TP*C)-3'), 110 mM potassium chloride, 10 uM EDTA, 90% H2O/10% D2O ; 3 '90% H2O/10% D2O' '0.5-1.0 mM RNA (29-MER), 10 mM potassium chloride, 10 uM EDTA, 100% D2O' 4 '100% D2O' ;0.6-0.9 mM [3',4',5',5'',5]-100% 2H RNA (29-MER), 0.7-1.0 mM DNA (5'-D(*CP*AP*GP*TP*GP*TP*C)-3'), 110 mM potassium chloride, 10 uM EDTA, 100% D2O ; 5 '100% D2O' ;0.6-0.9 mM [U-100% 13C; U-100% 15N] RNA (29-MER), 0.7-1.0 mM DNA (5'-D(*CP*AP*GP*TP*GP*TP*C)-3'), 110 mM potassium chloride, 10 uM EDTA, 100% D2O ; 6 '100% D2O' '0.5-1.0 mM [U-100% 13C; U-100% 15N] RNA (29-MER), 10 mM potassium chloride, 10 uM EDTA, 90% H2O/10% D2O' 7 '90% H2O/10% D2O' '0.5-1.0 mM RNA (29-MER), 10 mM potassium chloride, 10 uM EDTA, 90% H2O/10% D2O' 8 '90% H2O/10% D2O' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'RNA (29-MER)-1' ? 0.6-0.9 mM ? 1 ;DNA (5'-D(*CP*AP*GP*TP*GP*TP*C)-3')-2 ; ? 0.7-1.0 mM ? 1 'potassium chloride-3' 110 ? mM ? 1 EDTA-4 10 ? uM ? 1 'RNA (29-MER)-5' ? 0.6-0.9 mM ? 2 ;DNA (5'-D(*CP*AP*GP*TP*GP*TP*C)-3')-6 ; ? 0.7-1.0 mM ? 2 'potassium chloride-7' 110 ? mM ? 2 EDTA-8 10 ? uM ? 2 'RNA (29-MER)-9' ? 0.6-0.9 mM '[U-100% 13C; U-100% 15N]' 3 ;DNA (5'-D(*CP*AP*GP*TP*GP*TP*C)-3')-10 ; ? 0.7-1.0 mM ? 3 'potassium chloride-11' 110 ? mM ? 3 EDTA-12 10 ? uM ? 3 'RNA (29-MER)-13' ? 0.5-1.0 mM ? 4 'potassium chloride-14' 10 ? mM ? 4 EDTA-15 10 ? uM ? 4 'RNA (29-MER)-16' ? 0.6-0.9 mM ;[3',4',5',5'',5]-100% 2H ; 5 ;DNA (5'-D(*CP*AP*GP*TP*GP*TP*C)-3')-17 ; ? 0.7-1.0 mM ? 5 'potassium chloride-18' 110 ? mM ? 5 EDTA-19 10 ? uM ? 5 'RNA (29-MER)-20' ? 0.6-0.9 mM '[U-100% 13C; U-100% 15N]' 6 ;DNA (5'-D(*CP*AP*GP*TP*GP*TP*C)-3')-21 ; ? 0.7-1.0 mM ? 6 'potassium chloride-22' 110 ? mM ? 6 EDTA-23 10 ? uM ? 6 'RNA (29-MER)-24' ? 0.5-1.0 mM '[U-100% 13C; U-100% 15N]' 7 'potassium chloride-25' 10 ? mM ? 7 EDTA-26 10 ? uM ? 7 'RNA (29-MER)-27' ? 0.5-1.0 mM ? 8 'potassium chloride-28' 10 ? mM ? 8 EDTA-29 10 ? uM ? 8 # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.temperature_units 1 110 6.8 ambient ? 298 K 2 110 6.8 ambient ? 278 K 3 110 6.8 ambient ? 293 K # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-1H NOESY' 1 2 1 '2D 1H-1H TOCSY' 1 3 5 '2D 1H-1H NOESY' 1 4 4 '2D 1H-1H NOESY' 1 5 4 '2D 1H-1H TOCSY' 1 6 3 '2D 1H-15N HSQC' 2 7 2 '2D 1H-15N HSQC' 1 8 6 '2D 1H-13C HSQC aliphatic' 1 9 6 '2D 1H-13C HSQC aromatic' 3 10 2 '2D 1H-1H NOESY' 2 11 2 '2D 1H-1H NOESY' 1 12 6 '2D 1H-13C HSQC aliphatic' 1 13 6 '2D 1H-13C HSQC aromatic' 1 14 1 '1D 31P' 1 15 3 'F1, F2 X-filtered 1H-1H NOESY' 1 16 3 'F1, F2 X-filtered 1H-1H TOCSY' # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2M1V _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count 82 _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count 34 _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count 22 _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count 36 _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count 26 _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count 22 _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count 22 _pdbx_nmr_constraints.NA_other-angle_constraints_total_count 33 _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count 78 _pdbx_nmr_constraints.NOE_constraints_total 733 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count 240 _pdbx_nmr_constraints.NOE_long_range_total_count ? _pdbx_nmr_constraints.NOE_medium_range_total_count ? _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count 351 _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count ? # _pdbx_nmr_refine.entry_id 2M1V _pdbx_nmr_refine.method 'molecular dynamics, torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Bruker Biospin' processing TopSpin 3.0 1 'Bruker Biospin' 'data analysis' TopSpin 3.0 2 Goddard 'data analysis' Sparky ? 3 Goddard 'chemical shift assignment' Sparky ? 4 Goddard 'peak picking' Sparky ? 5 'Guntert, Braun and Wuthrich' 'data analysis' DYANA 1.5 6 'Guntert, Braun and Wuthrich' 'structure solution' DYANA 1.5 7 'Brunger, Adams, Clore, Gros, Nilges and Read' 'structure solution' CNS 1.2 8 'Schwieters, Kuszewski, Tjandra and Clore' 'structure solution' 'X-PLOR NIH' 2.3 9 'Schwieters, Kuszewski, Tjandra and Clore' refinement 'X-PLOR NIH' 2.3 10 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 DA OP3 O N N 73 DA P P N N 74 DA OP1 O N N 75 DA OP2 O N N 76 DA "O5'" O N N 77 DA "C5'" C N N 78 DA "C4'" C N R 79 DA "O4'" O N N 80 DA "C3'" C N S 81 DA "O3'" O N N 82 DA "C2'" C N N 83 DA "C1'" C N R 84 DA N9 N Y N 85 DA C8 C Y N 86 DA N7 N Y N 87 DA C5 C Y N 88 DA C6 C Y N 89 DA N6 N N N 90 DA N1 N Y N 91 DA C2 C Y N 92 DA N3 N Y N 93 DA C4 C Y N 94 DA HOP3 H N N 95 DA HOP2 H N N 96 DA "H5'" H N N 97 DA "H5''" H N N 98 DA "H4'" H N N 99 DA "H3'" H N N 100 DA "HO3'" H N N 101 DA "H2'" H N N 102 DA "H2''" H N N 103 DA "H1'" H N N 104 DA H8 H N N 105 DA H61 H N N 106 DA H62 H N N 107 DA H2 H N N 108 DC OP3 O N N 109 DC P P N N 110 DC OP1 O N N 111 DC OP2 O N N 112 DC "O5'" O N N 113 DC "C5'" C N N 114 DC "C4'" C N R 115 DC "O4'" O N N 116 DC "C3'" C N S 117 DC "O3'" O N N 118 DC "C2'" C N N 119 DC "C1'" C N R 120 DC N1 N N N 121 DC C2 C N N 122 DC O2 O N N 123 DC N3 N N N 124 DC C4 C N N 125 DC N4 N N N 126 DC C5 C N N 127 DC C6 C N N 128 DC HOP3 H N N 129 DC HOP2 H N N 130 DC "H5'" H N N 131 DC "H5''" H N N 132 DC "H4'" H N N 133 DC "H3'" H N N 134 DC "HO3'" H N N 135 DC "H2'" H N N 136 DC "H2''" H N N 137 DC "H1'" H N N 138 DC H41 H N N 139 DC H42 H N N 140 DC H5 H N N 141 DC H6 H N N 142 DG OP3 O N N 143 DG P P N N 144 DG OP1 O N N 145 DG OP2 O N N 146 DG "O5'" O N N 147 DG "C5'" C N N 148 DG "C4'" C N R 149 DG "O4'" O N N 150 DG "C3'" C N S 151 DG "O3'" O N N 152 DG "C2'" C N N 153 DG "C1'" C N R 154 DG N9 N Y N 155 DG C8 C Y N 156 DG N7 N Y N 157 DG C5 C Y N 158 DG C6 C N N 159 DG O6 O N N 160 DG N1 N N N 161 DG C2 C N N 162 DG N2 N N N 163 DG N3 N N N 164 DG C4 C Y N 165 DG HOP3 H N N 166 DG HOP2 H N N 167 DG "H5'" H N N 168 DG "H5''" H N N 169 DG "H4'" H N N 170 DG "H3'" H N N 171 DG "HO3'" H N N 172 DG "H2'" H N N 173 DG "H2''" H N N 174 DG "H1'" H N N 175 DG H8 H N N 176 DG H1 H N N 177 DG H21 H N N 178 DG H22 H N N 179 DT OP3 O N N 180 DT P P N N 181 DT OP1 O N N 182 DT OP2 O N N 183 DT "O5'" O N N 184 DT "C5'" C N N 185 DT "C4'" C N R 186 DT "O4'" O N N 187 DT "C3'" C N S 188 DT "O3'" O N N 189 DT "C2'" C N N 190 DT "C1'" C N R 191 DT N1 N N N 192 DT C2 C N N 193 DT O2 O N N 194 DT N3 N N N 195 DT C4 C N N 196 DT O4 O N N 197 DT C5 C N N 198 DT C7 C N N 199 DT C6 C N N 200 DT HOP3 H N N 201 DT HOP2 H N N 202 DT "H5'" H N N 203 DT "H5''" H N N 204 DT "H4'" H N N 205 DT "H3'" H N N 206 DT "HO3'" H N N 207 DT "H2'" H N N 208 DT "H2''" H N N 209 DT "H1'" H N N 210 DT H3 H N N 211 DT H71 H N N 212 DT H72 H N N 213 DT H73 H N N 214 DT H6 H N N 215 G OP3 O N N 216 G P P N N 217 G OP1 O N N 218 G OP2 O N N 219 G "O5'" O N N 220 G "C5'" C N N 221 G "C4'" C N R 222 G "O4'" O N N 223 G "C3'" C N S 224 G "O3'" O N N 225 G "C2'" C N R 226 G "O2'" O N N 227 G "C1'" C N R 228 G N9 N Y N 229 G C8 C Y N 230 G N7 N Y N 231 G C5 C Y N 232 G C6 C N N 233 G O6 O N N 234 G N1 N N N 235 G C2 C N N 236 G N2 N N N 237 G N3 N N N 238 G C4 C Y N 239 G HOP3 H N N 240 G HOP2 H N N 241 G "H5'" H N N 242 G "H5''" H N N 243 G "H4'" H N N 244 G "H3'" H N N 245 G "HO3'" H N N 246 G "H2'" H N N 247 G "HO2'" H N N 248 G "H1'" H N N 249 G H8 H N N 250 G H1 H N N 251 G H21 H N N 252 G H22 H N N 253 U OP3 O N N 254 U P P N N 255 U OP1 O N N 256 U OP2 O N N 257 U "O5'" O N N 258 U "C5'" C N N 259 U "C4'" C N R 260 U "O4'" O N N 261 U "C3'" C N S 262 U "O3'" O N N 263 U "C2'" C N R 264 U "O2'" O N N 265 U "C1'" C N R 266 U N1 N N N 267 U C2 C N N 268 U O2 O N N 269 U N3 N N N 270 U C4 C N N 271 U O4 O N N 272 U C5 C N N 273 U C6 C N N 274 U HOP3 H N N 275 U HOP2 H N N 276 U "H5'" H N N 277 U "H5''" H N N 278 U "H4'" H N N 279 U "H3'" H N N 280 U "HO3'" H N N 281 U "H2'" H N N 282 U "HO2'" H N N 283 U "H1'" H N N 284 U H3 H N N 285 U H5 H N N 286 U H6 H N N 287 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 DA OP3 P sing N N 76 DA OP3 HOP3 sing N N 77 DA P OP1 doub N N 78 DA P OP2 sing N N 79 DA P "O5'" sing N N 80 DA OP2 HOP2 sing N N 81 DA "O5'" "C5'" sing N N 82 DA "C5'" "C4'" sing N N 83 DA "C5'" "H5'" sing N N 84 DA "C5'" "H5''" sing N N 85 DA "C4'" "O4'" sing N N 86 DA "C4'" "C3'" sing N N 87 DA "C4'" "H4'" sing N N 88 DA "O4'" "C1'" sing N N 89 DA "C3'" "O3'" sing N N 90 DA "C3'" "C2'" sing N N 91 DA "C3'" "H3'" sing N N 92 DA "O3'" "HO3'" sing N N 93 DA "C2'" "C1'" sing N N 94 DA "C2'" "H2'" sing N N 95 DA "C2'" "H2''" sing N N 96 DA "C1'" N9 sing N N 97 DA "C1'" "H1'" sing N N 98 DA N9 C8 sing Y N 99 DA N9 C4 sing Y N 100 DA C8 N7 doub Y N 101 DA C8 H8 sing N N 102 DA N7 C5 sing Y N 103 DA C5 C6 sing Y N 104 DA C5 C4 doub Y N 105 DA C6 N6 sing N N 106 DA C6 N1 doub Y N 107 DA N6 H61 sing N N 108 DA N6 H62 sing N N 109 DA N1 C2 sing Y N 110 DA C2 N3 doub Y N 111 DA C2 H2 sing N N 112 DA N3 C4 sing Y N 113 DC OP3 P sing N N 114 DC OP3 HOP3 sing N N 115 DC P OP1 doub N N 116 DC P OP2 sing N N 117 DC P "O5'" sing N N 118 DC OP2 HOP2 sing N N 119 DC "O5'" "C5'" sing N N 120 DC "C5'" "C4'" sing N N 121 DC "C5'" "H5'" sing N N 122 DC "C5'" "H5''" sing N N 123 DC "C4'" "O4'" sing N N 124 DC "C4'" "C3'" sing N N 125 DC "C4'" "H4'" sing N N 126 DC "O4'" "C1'" sing N N 127 DC "C3'" "O3'" sing N N 128 DC "C3'" "C2'" sing N N 129 DC "C3'" "H3'" sing N N 130 DC "O3'" "HO3'" sing N N 131 DC "C2'" "C1'" sing N N 132 DC "C2'" "H2'" sing N N 133 DC "C2'" "H2''" sing N N 134 DC "C1'" N1 sing N N 135 DC "C1'" "H1'" sing N N 136 DC N1 C2 sing N N 137 DC N1 C6 sing N N 138 DC C2 O2 doub N N 139 DC C2 N3 sing N N 140 DC N3 C4 doub N N 141 DC C4 N4 sing N N 142 DC C4 C5 sing N N 143 DC N4 H41 sing N N 144 DC N4 H42 sing N N 145 DC C5 C6 doub N N 146 DC C5 H5 sing N N 147 DC C6 H6 sing N N 148 DG OP3 P sing N N 149 DG OP3 HOP3 sing N N 150 DG P OP1 doub N N 151 DG P OP2 sing N N 152 DG P "O5'" sing N N 153 DG OP2 HOP2 sing N N 154 DG "O5'" "C5'" sing N N 155 DG "C5'" "C4'" sing N N 156 DG "C5'" "H5'" sing N N 157 DG "C5'" "H5''" sing N N 158 DG "C4'" "O4'" sing N N 159 DG "C4'" "C3'" sing N N 160 DG "C4'" "H4'" sing N N 161 DG "O4'" "C1'" sing N N 162 DG "C3'" "O3'" sing N N 163 DG "C3'" "C2'" sing N N 164 DG "C3'" "H3'" sing N N 165 DG "O3'" "HO3'" sing N N 166 DG "C2'" "C1'" sing N N 167 DG "C2'" "H2'" sing N N 168 DG "C2'" "H2''" sing N N 169 DG "C1'" N9 sing N N 170 DG "C1'" "H1'" sing N N 171 DG N9 C8 sing Y N 172 DG N9 C4 sing Y N 173 DG C8 N7 doub Y N 174 DG C8 H8 sing N N 175 DG N7 C5 sing Y N 176 DG C5 C6 sing N N 177 DG C5 C4 doub Y N 178 DG C6 O6 doub N N 179 DG C6 N1 sing N N 180 DG N1 C2 sing N N 181 DG N1 H1 sing N N 182 DG C2 N2 sing N N 183 DG C2 N3 doub N N 184 DG N2 H21 sing N N 185 DG N2 H22 sing N N 186 DG N3 C4 sing N N 187 DT OP3 P sing N N 188 DT OP3 HOP3 sing N N 189 DT P OP1 doub N N 190 DT P OP2 sing N N 191 DT P "O5'" sing N N 192 DT OP2 HOP2 sing N N 193 DT "O5'" "C5'" sing N N 194 DT "C5'" "C4'" sing N N 195 DT "C5'" "H5'" sing N N 196 DT "C5'" "H5''" sing N N 197 DT "C4'" "O4'" sing N N 198 DT "C4'" "C3'" sing N N 199 DT "C4'" "H4'" sing N N 200 DT "O4'" "C1'" sing N N 201 DT "C3'" "O3'" sing N N 202 DT "C3'" "C2'" sing N N 203 DT "C3'" "H3'" sing N N 204 DT "O3'" "HO3'" sing N N 205 DT "C2'" "C1'" sing N N 206 DT "C2'" "H2'" sing N N 207 DT "C2'" "H2''" sing N N 208 DT "C1'" N1 sing N N 209 DT "C1'" "H1'" sing N N 210 DT N1 C2 sing N N 211 DT N1 C6 sing N N 212 DT C2 O2 doub N N 213 DT C2 N3 sing N N 214 DT N3 C4 sing N N 215 DT N3 H3 sing N N 216 DT C4 O4 doub N N 217 DT C4 C5 sing N N 218 DT C5 C7 sing N N 219 DT C5 C6 doub N N 220 DT C7 H71 sing N N 221 DT C7 H72 sing N N 222 DT C7 H73 sing N N 223 DT C6 H6 sing N N 224 G OP3 P sing N N 225 G OP3 HOP3 sing N N 226 G P OP1 doub N N 227 G P OP2 sing N N 228 G P "O5'" sing N N 229 G OP2 HOP2 sing N N 230 G "O5'" "C5'" sing N N 231 G "C5'" "C4'" sing N N 232 G "C5'" "H5'" sing N N 233 G "C5'" "H5''" sing N N 234 G "C4'" "O4'" sing N N 235 G "C4'" "C3'" sing N N 236 G "C4'" "H4'" sing N N 237 G "O4'" "C1'" sing N N 238 G "C3'" "O3'" sing N N 239 G "C3'" "C2'" sing N N 240 G "C3'" "H3'" sing N N 241 G "O3'" "HO3'" sing N N 242 G "C2'" "O2'" sing N N 243 G "C2'" "C1'" sing N N 244 G "C2'" "H2'" sing N N 245 G "O2'" "HO2'" sing N N 246 G "C1'" N9 sing N N 247 G "C1'" "H1'" sing N N 248 G N9 C8 sing Y N 249 G N9 C4 sing Y N 250 G C8 N7 doub Y N 251 G C8 H8 sing N N 252 G N7 C5 sing Y N 253 G C5 C6 sing N N 254 G C5 C4 doub Y N 255 G C6 O6 doub N N 256 G C6 N1 sing N N 257 G N1 C2 sing N N 258 G N1 H1 sing N N 259 G C2 N2 sing N N 260 G C2 N3 doub N N 261 G N2 H21 sing N N 262 G N2 H22 sing N N 263 G N3 C4 sing N N 264 U OP3 P sing N N 265 U OP3 HOP3 sing N N 266 U P OP1 doub N N 267 U P OP2 sing N N 268 U P "O5'" sing N N 269 U OP2 HOP2 sing N N 270 U "O5'" "C5'" sing N N 271 U "C5'" "C4'" sing N N 272 U "C5'" "H5'" sing N N 273 U "C5'" "H5''" sing N N 274 U "C4'" "O4'" sing N N 275 U "C4'" "C3'" sing N N 276 U "C4'" "H4'" sing N N 277 U "O4'" "C1'" sing N N 278 U "C3'" "O3'" sing N N 279 U "C3'" "C2'" sing N N 280 U "C3'" "H3'" sing N N 281 U "O3'" "HO3'" sing N N 282 U "C2'" "O2'" sing N N 283 U "C2'" "C1'" sing N N 284 U "C2'" "H2'" sing N N 285 U "O2'" "HO2'" sing N N 286 U "C1'" N1 sing N N 287 U "C1'" "H1'" sing N N 288 U N1 C2 sing N N 289 U N1 C6 sing N N 290 U C2 O2 doub N N 291 U C2 N3 sing N N 292 U N3 C4 sing N N 293 U N3 H3 sing N N 294 U C4 O4 doub N N 295 U C4 C5 sing N N 296 U C5 C6 doub N N 297 U C5 H5 sing N N 298 U C6 H6 sing N N 299 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2M1V 'double helix' 2M1V 'a-form double helix' 2M1V 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 29 1_555 -0.806 -0.337 0.361 -1.250 -4.503 1.777 1 A_G1:C29_A A 1 ? A 29 ? 19 1 1 A G 2 1_555 A C 28 1_555 -0.661 -0.308 0.495 0.748 -5.568 -9.244 2 A_G2:C28_A A 2 ? A 28 ? 19 1 1 A A 3 1_555 A U 27 1_555 -0.835 -0.106 -0.560 -8.797 -4.204 -6.238 3 A_A3:U27_A A 3 ? A 27 ? 20 1 1 A G 4 1_555 A C 26 1_555 -0.547 -0.276 0.239 -4.639 -16.805 -9.083 4 A_G4:C26_A A 4 ? A 26 ? 19 1 1 A U 5 1_555 A A 25 1_555 -0.680 -0.162 -0.136 0.892 -3.911 -2.415 5 A_U5:A25_A A 5 ? A 25 ? 20 1 1 A A 6 1_555 A U 24 1_555 0.408 -0.067 -0.339 -5.009 -2.326 7.543 6 A_A6:U24_A A 6 ? A 24 ? 20 1 1 A U 7 1_555 A A 23 1_555 -0.726 -0.165 -0.613 8.173 -1.406 -5.289 7 A_U7:A23_A A 7 ? A 23 ? 20 1 1 A G 8 1_555 A C 22 1_555 0.488 -0.200 0.092 -0.278 4.410 -0.926 8 A_G8:C22_A A 8 ? A 22 ? 19 1 1 A U 9 1_555 A G 21 1_555 1.883 -0.261 0.079 2.900 -3.024 3.931 9 A_U9:G21_A A 9 ? A 21 ? 28 1 1 A A 10 1_555 A A 20 1_555 -1.374 -0.096 -2.224 7.378 -0.994 -55.552 10 A_A10:A20_A A 10 ? A 20 ? ? 1 1 B DC 1 1_555 A G 19 1_555 -0.627 -0.033 -0.002 -2.637 -10.278 -4.574 11 B_DC59:G19_A B 59 ? A 19 ? 19 1 1 B DA 2 1_555 A U 18 1_555 1.445 -0.111 -0.090 -0.678 -9.732 -14.714 12 B_DA60:U18_A B 60 ? A 18 ? 20 1 1 B DG 3 1_555 A C 17 1_555 0.559 -0.188 0.107 -6.857 -14.037 -4.865 13 B_DG61:C17_A B 61 ? A 17 ? 19 1 1 B DT 4 1_555 A A 16 1_555 -0.629 0.062 -0.145 2.159 -3.584 -0.424 14 B_DT62:A16_A B 62 ? A 16 ? 20 1 1 B DG 5 1_555 A C 15 1_555 0.630 -0.223 0.523 1.165 -0.174 0.349 15 B_DG63:C15_A B 63 ? A 15 ? 19 1 1 B DT 6 1_555 A G 14 1_555 1.868 -0.238 0.167 -7.099 -3.902 1.799 16 B_DT64:G14_A B 64 ? A 14 ? 28 1 1 B DC 7 1_555 A G 13 1_555 -0.597 -0.090 0.168 -3.328 -6.839 -2.020 17 B_DC65:G13_A B 65 ? A 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 29 1_555 A G 2 1_555 A C 28 1_555 -2.442 -0.702 2.437 -9.053 4.712 37.197 -1.542 2.782 2.826 7.222 13.875 38.524 1 AA_G1G2:C28C29_AA A 1 ? A 29 ? A 2 ? A 28 ? 1 A G 2 1_555 A C 28 1_555 A A 3 1_555 A U 27 1_555 0.587 -1.598 3.806 2.414 1.515 34.017 -3.000 -0.556 3.765 2.584 -4.118 34.132 2 AA_G2A3:U27C28_AA A 2 ? A 28 ? A 3 ? A 27 ? 1 A A 3 1_555 A U 27 1_555 A G 4 1_555 A C 26 1_555 -0.538 -2.057 2.683 -5.546 0.554 29.200 -4.108 0.084 2.698 1.087 10.875 29.716 3 AA_A3G4:C26U27_AA A 3 ? A 27 ? A 4 ? A 26 ? 1 A G 4 1_555 A C 26 1_555 A U 5 1_555 A A 25 1_555 0.608 -1.331 3.491 -0.205 -17.652 35.881 0.427 -0.919 3.721 -26.752 0.310 39.860 4 AA_G4U5:A25C26_AA A 4 ? A 26 ? A 5 ? A 25 ? 1 A U 5 1_555 A A 25 1_555 A A 6 1_555 A U 24 1_555 0.589 -1.734 2.915 -1.034 20.800 33.579 -4.425 -0.967 1.595 32.424 1.612 39.354 5 AA_U5A6:U24A25_AA A 5 ? A 25 ? A 6 ? A 24 ? 1 A A 6 1_555 A U 24 1_555 A U 7 1_555 A A 23 1_555 -0.791 -1.442 3.196 1.616 -6.623 30.535 -1.400 1.779 3.381 -12.382 -3.021 31.269 6 AA_A6U7:A23U24_AA A 6 ? A 24 ? A 7 ? A 23 ? 1 A U 7 1_555 A A 23 1_555 A G 8 1_555 A C 22 1_555 0.079 -1.839 3.581 -3.623 12.798 32.418 -4.978 -0.675 2.664 21.812 6.176 34.973 7 AA_U7G8:C22A23_AA A 7 ? A 23 ? A 8 ? A 22 ? 1 A G 8 1_555 A C 22 1_555 A U 9 1_555 A G 21 1_555 0.066 -1.410 3.113 4.512 13.112 37.306 -3.429 0.369 2.490 19.684 -6.774 39.713 8 AA_G8U9:G21C22_AA A 8 ? A 22 ? A 9 ? A 21 ? 1 A U 9 1_555 A G 21 1_555 A A 10 1_555 A A 20 1_555 -3.383 -1.355 3.391 13.159 18.360 20.805 -4.880 8.064 0.078 38.919 -27.895 30.618 9 AA_U9A10:A20G21_AA A 9 ? A 21 ? A 10 ? A 20 ? 1 A A 10 1_555 A A 20 1_555 B DC 1 1_555 A G 19 1_555 -0.037 -0.620 4.123 -12.147 -30.761 61.081 0.975 -0.569 3.970 -28.179 11.127 68.692 10 AB_A10DC59:G19A20_AA A 10 ? A 20 ? B 59 ? A 19 ? 1 B DC 1 1_555 A G 19 1_555 B DA 2 1_555 A U 18 1_555 -0.858 -1.206 2.803 1.467 20.650 39.713 -3.057 1.235 1.946 28.197 -2.003 44.590 11 BB_DC59DA60:U18G19_AA B 59 ? A 19 ? B 60 ? A 18 ? 1 B DA 2 1_555 A U 18 1_555 B DG 3 1_555 A C 17 1_555 0.202 -1.714 2.720 -4.762 8.820 33.218 -3.911 -0.898 2.159 15.008 8.103 34.657 12 BB_DA60DG61:C17U18_AA B 60 ? A 18 ? B 61 ? A 17 ? 1 B DG 3 1_555 A C 17 1_555 B DT 4 1_555 A A 16 1_555 1.096 -1.168 3.024 1.039 0.390 26.920 -2.599 -2.106 3.046 0.837 -2.230 26.942 13 BB_DG61DT62:A16C17_AA B 61 ? A 17 ? B 62 ? A 16 ? 1 B DT 4 1_555 A A 16 1_555 B DG 5 1_555 A C 15 1_555 -0.352 -1.811 2.650 -8.179 7.806 35.430 -3.643 -0.285 2.238 12.442 13.036 37.135 14 BB_DT62DG63:C15A16_AA B 62 ? A 16 ? B 63 ? A 15 ? 1 B DG 5 1_555 A C 15 1_555 B DT 6 1_555 A G 14 1_555 -0.101 -1.459 3.433 6.020 22.523 32.636 -4.536 0.789 2.010 35.057 -9.371 39.923 15 BB_DG63DT64:G14C15_AA B 63 ? A 15 ? B 64 ? A 14 ? 1 B DT 6 1_555 A G 14 1_555 B DC 7 1_555 A G 13 1_555 0.233 -0.808 2.962 0.892 31.902 25.264 -4.057 -0.256 1.250 52.569 -1.469 40.499 16 BB_DT64DC65:G13G14_AA B 64 ? A 14 ? B 65 ? A 13 ? # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 700 Bruker AVANCE 1 'Bruker Avance' 600 Bruker AVANCE 2 'Bruker Avance' 500 Bruker AVANCE 3 'Bruker Avance' # _atom_sites.entry_id 2M1V _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_