HEADER ISOMERASE 17-DEC-12 2M2A TITLE NMR SOLUTION STRUCTURE OF THE TWO DOMAIN PPIASE SLPA FROM ESCHERICHIA TITLE 2 COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: FKBP-TYPE 16 KDA PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PPIASE, ROTAMASE; COMPND 5 EC: 5.2.1.8 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12 KEYWDS FKBP FOLD, ISOMERASE EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR M.KOVERMANN,U.WEININGER,J.BALBACH REVDAT 3 15-MAY-24 2M2A 1 REMARK REVDAT 2 14-JUN-23 2M2A 1 REMARK REVDAT 1 18-DEC-13 2M2A 0 JRNL AUTH M.KOVERMANN,A.GEITNER,U.WEININGER,F.SCHMID,J.BALBACH JRNL TITL NMR SOLUTION STRUCTURE OF THE TWO DOMAIN PPIASE SLPA FROM JRNL TITL 2 ESCHERICHIA COLI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN 2.3, ARIA REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), LINGE, O'DONOGHUE AND REMARK 3 NILGES (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2M2A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000103118. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-99% 13C; U-99% 15N] REMARK 210 SLPA, 100 MM POTASSIUM PHOSPHATE, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC; 3D 1H-15N NOESY; 3D REMARK 210 HNCA; 3D HNCACB; 3D HN(COCA)CB; REMARK 210 3D HCCH-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, NMRVIEW, ARIA REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 300 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO A 128 H ALA A 130 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 43.34 -165.02 REMARK 500 1 THR A 28 44.55 -148.23 REMARK 500 1 ARG A 29 -45.96 -151.65 REMARK 500 1 SER A 43 -45.09 -154.31 REMARK 500 1 ALA A 70 -84.66 -131.92 REMARK 500 1 ASP A 105 22.97 -78.59 REMARK 500 1 PRO A 128 175.76 -46.06 REMARK 500 1 LEU A 129 43.74 -49.45 REMARK 500 1 LEU A 147 45.94 -98.61 REMARK 500 2 ASN A 8 -1.01 77.24 REMARK 500 2 ARG A 29 -71.78 -118.12 REMARK 500 2 PHE A 71 -45.48 72.07 REMARK 500 2 PHE A 125 59.15 -117.98 REMARK 500 2 HIS A 127 -175.20 -60.73 REMARK 500 2 PRO A 128 177.47 -42.82 REMARK 500 2 LEU A 129 42.45 -47.60 REMARK 500 3 ASN A 8 41.25 73.50 REMARK 500 3 ASN A 30 35.00 -82.52 REMARK 500 3 SER A 43 -39.79 -134.42 REMARK 500 3 ALA A 70 -85.84 -117.86 REMARK 500 3 PRO A 128 173.70 -44.59 REMARK 500 3 LEU A 129 37.07 -51.44 REMARK 500 4 ASN A 8 35.07 72.70 REMARK 500 4 THR A 28 57.14 -91.69 REMARK 500 4 ARG A 29 -55.73 -146.44 REMARK 500 4 SER A 43 -54.36 -161.18 REMARK 500 4 PHE A 71 -40.93 73.48 REMARK 500 4 PRO A 128 174.11 -41.53 REMARK 500 4 LEU A 129 38.32 -50.50 REMARK 500 4 LEU A 147 44.88 -82.44 REMARK 500 5 SER A 2 70.25 42.55 REMARK 500 5 ASN A 8 38.06 75.08 REMARK 500 5 THR A 28 65.77 -152.42 REMARK 500 5 ARG A 29 -52.27 -154.11 REMARK 500 5 SER A 43 -37.96 -154.17 REMARK 500 5 ALA A 70 -86.60 -119.58 REMARK 500 5 PRO A 128 172.28 -43.23 REMARK 500 5 LEU A 129 36.85 -52.23 REMARK 500 6 ARG A 29 -61.15 -151.75 REMARK 500 6 SER A 43 -49.17 -166.32 REMARK 500 6 ALA A 70 -86.11 -126.25 REMARK 500 6 PRO A 128 172.64 -41.83 REMARK 500 6 LEU A 129 34.76 -51.68 REMARK 500 6 LEU A 147 41.79 -90.19 REMARK 500 7 ARG A 29 -70.85 -174.07 REMARK 500 7 PHE A 71 -47.96 74.37 REMARK 500 7 PRO A 128 174.77 -41.51 REMARK 500 7 LEU A 129 41.43 -48.85 REMARK 500 8 SER A 2 70.01 49.59 REMARK 500 8 THR A 28 14.48 -148.59 REMARK 500 REMARK 500 THIS ENTRY HAS 75 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 74 SER A 75 9 145.49 REMARK 500 HIS A 127 PRO A 128 9 141.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18904 RELATED DB: BMRB DBREF 2M2A A 1 148 UNP P0AEM0 FKBX_ECOLI 1 148 SEQRES 1 A 148 MET SER GLU SER VAL GLN SER ASN SER ALA VAL LEU VAL SEQRES 2 A 148 HIS PHE THR LEU LYS LEU ASP ASP GLY THR THR ALA GLU SEQRES 3 A 148 SER THR ARG ASN ASN GLY LYS PRO ALA LEU PHE ARG LEU SEQRES 4 A 148 GLY ASP ALA SER LEU SER GLU GLY LEU GLU GLN HIS LEU SEQRES 5 A 148 LEU GLY LEU LYS VAL GLY ASP LYS THR THR PHE SER LEU SEQRES 6 A 148 GLU PRO ASP ALA ALA PHE GLY VAL PRO SER PRO ASP LEU SEQRES 7 A 148 ILE GLN TYR PHE SER ARG ARG GLU PHE MET ASP ALA GLY SEQRES 8 A 148 GLU PRO GLU ILE GLY ALA ILE MET LEU PHE THR ALA MET SEQRES 9 A 148 ASP GLY SER GLU MET PRO GLY VAL ILE ARG GLU ILE ASN SEQRES 10 A 148 GLY ASP SER ILE THR VAL ASP PHE ASN HIS PRO LEU ALA SEQRES 11 A 148 GLY GLN THR VAL HIS PHE ASP ILE GLU VAL LEU GLU ILE SEQRES 12 A 148 ASP PRO ALA LEU GLU HELIX 1 1 SER A 45 GLN A 50 1 6 HELIX 2 2 GLU A 66 ALA A 70 5 5 HELIX 3 3 SER A 75 ILE A 79 5 5 HELIX 4 4 ARG A 85 GLY A 91 5 7 SHEET 1 A 3 ALA A 35 PHE A 37 0 SHEET 2 A 3 VAL A 11 VAL A 13 -1 N VAL A 13 O ALA A 35 SHEET 3 A 3 GLU A 142 ILE A 143 -1 O GLU A 142 N LEU A 12 SHEET 1 B 4 THR A 24 THR A 28 0 SHEET 2 B 4 PHE A 15 LYS A 18 -1 N LEU A 17 O GLU A 26 SHEET 3 B 4 VAL A 134 GLU A 139 -1 O HIS A 135 N LYS A 18 SHEET 4 B 4 LYS A 60 LEU A 65 -1 N THR A 61 O ILE A 138 SHEET 1 C 3 TYR A 81 SER A 83 0 SHEET 2 C 3 SER A 120 THR A 122 -1 O ILE A 121 N PHE A 82 SHEET 3 C 3 GLU A 115 ILE A 116 -1 N GLU A 115 O THR A 122 SHEET 1 D 2 ALA A 97 THR A 102 0 SHEET 2 D 2 GLU A 108 ILE A 113 -1 O MET A 109 N PHE A 101 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1