data_2M2E # _entry.id 2M2E # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2M2E pdb_00002m2e 10.2210/pdb2m2e/pdb RCSB RCSB103122 ? ? BMRB 18909 ? ? WWPDB D_1000103122 ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 18909 BMRB unspecified . NESG-HR8254a TargetTrack unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2M2E _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-12-18 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category CASD-NMR _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lemak, A.' 1 'Yee, A.' 2 'Houliston, S.' 3 'Garcia, M.' 4 'Ong, M.' 5 'Montelione, G.T.' 6 'Arrowsmith, C.' 7 'Northeast Structural Genomics Consortium (NESG)' 8 'Structural Genomics Consortium (SGC)' 9 # _citation.id primary _citation.title 'NMR solution structure of the SANT domain of human DnaJC2.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lemak, A.' 1 ? primary 'Yee, A.' 2 ? primary 'Houliston, S.' 3 ? primary 'Garcia, M.' 4 ? primary 'Ong, M.' 5 ? primary 'Arrowsmith, C.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'DnaJ homolog subfamily C member 2' _entity.formula_weight 8493.934 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'SANT 2 domain residues 551-621' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'M-phase phosphoprotein 11, Zuotin-related factor 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code QGFTPWTTEEQKLLEQALKTYPVNTPERWKKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQEQVLNASRAKK _entity_poly.pdbx_seq_one_letter_code_can QGFTPWTTEEQKLLEQALKTYPVNTPERWKKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQEQVLNASRAKK _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier NESG-HR8254a # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 GLY n 1 3 PHE n 1 4 THR n 1 5 PRO n 1 6 TRP n 1 7 THR n 1 8 THR n 1 9 GLU n 1 10 GLU n 1 11 GLN n 1 12 LYS n 1 13 LEU n 1 14 LEU n 1 15 GLU n 1 16 GLN n 1 17 ALA n 1 18 LEU n 1 19 LYS n 1 20 THR n 1 21 TYR n 1 22 PRO n 1 23 VAL n 1 24 ASN n 1 25 THR n 1 26 PRO n 1 27 GLU n 1 28 ARG n 1 29 TRP n 1 30 LYS n 1 31 LYS n 1 32 ILE n 1 33 ALA n 1 34 GLU n 1 35 ALA n 1 36 VAL n 1 37 PRO n 1 38 GLY n 1 39 ARG n 1 40 THR n 1 41 LYS n 1 42 LYS n 1 43 ASP n 1 44 CYS n 1 45 MET n 1 46 LYS n 1 47 ARG n 1 48 TYR n 1 49 LYS n 1 50 GLU n 1 51 LEU n 1 52 VAL n 1 53 GLU n 1 54 MET n 1 55 VAL n 1 56 LYS n 1 57 ALA n 1 58 LYS n 1 59 LYS n 1 60 ALA n 1 61 ALA n 1 62 GLN n 1 63 GLU n 1 64 GLN n 1 65 VAL n 1 66 LEU n 1 67 ASN n 1 68 ALA n 1 69 SER n 1 70 ARG n 1 71 ALA n 1 72 LYS n 1 73 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'DNAJC2, MPHOSPH11, MPP11, ZRF1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pET28-MHL _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DNJC2_HUMAN _struct_ref.pdbx_db_accession Q99543 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code FTPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQEQVLNASRAKK _struct_ref.pdbx_align_begin 551 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2M2E _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 73 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q99543 _struct_ref_seq.db_align_beg 551 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 621 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 551 _struct_ref_seq.pdbx_auth_seq_align_end 621 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2M2E GLN A 1 ? UNP Q99543 ? ? 'expression tag' 549 1 1 2M2E GLY A 2 ? UNP Q99543 ? ? 'expression tag' 550 2 1 2M2E LYS A 30 ? UNP Q99543 GLU 578 conflict 578 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '3D HNCO' 1 2 1 '3D HNCA' 1 3 1 '3D CBCA(CO)NH' 1 4 1 '3D HBHA(CO)NH' 1 5 1 '3D HCCH-TOCSY' 1 6 1 '3D HCCH-TOCSY' 1 7 1 '3D 1H-15N NOESY' 1 8 1 '3D 1H-13C NOESY aliphatic' 1 9 1 '3D 1H-13C NOESY aromatic' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 300 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents ;0.5 mM [U-13C; U-15N] protein, 10 mM TRIS, 300 mM sodium chloride, 10 uM ZnSO4, 10 mM DTT, 0.01 % NaN3, 1 mM benzamidine, 90% H2O/10% D2O ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2M2E _pdbx_nmr_refine.method 'restrained molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2M2E _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2M2E _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 1 Goddard 'peak picking' Sparky ? 2 'Lemak,Steren,Llinas, Arrowsmith' 'chemical shift assignment' FMC ? 3 'Cornilescu, Delaglio and Bax' 'data analysis' TALOS ? 4 'Bhattacharya and Montelione' validation PSVS ? 5 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA ? 6 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS ? 7 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2M2E _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2M2E _struct.title 'Solution NMR structure of the SANT domain of human DNAJC2, Northeast structural genomics consortium target HR8254a' _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2M2E _struct_keywords.pdbx_keywords 'transcription regulator' _struct_keywords.text ;transcription regulator, DNA-binding, NESG, Northeast structural genomics consortium, SGC, Structural Genomics Consortium, PSI-Biology ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 7 ? TYR A 21 ? THR A 555 TYR A 569 1 ? 15 HELX_P HELX_P2 2 GLU A 27 ? VAL A 36 ? GLU A 575 VAL A 584 1 ? 10 HELX_P HELX_P3 3 THR A 40 ? ALA A 71 ? THR A 588 ALA A 619 1 ? 32 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 2M2E _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 549 ? ? ? A . n A 1 2 GLY 2 550 ? ? ? A . n A 1 3 PHE 3 551 551 PHE PHE A . n A 1 4 THR 4 552 552 THR THR A . n A 1 5 PRO 5 553 553 PRO PRO A . n A 1 6 TRP 6 554 554 TRP TRP A . n A 1 7 THR 7 555 555 THR THR A . n A 1 8 THR 8 556 556 THR THR A . n A 1 9 GLU 9 557 557 GLU GLU A . n A 1 10 GLU 10 558 558 GLU GLU A . n A 1 11 GLN 11 559 559 GLN GLN A . n A 1 12 LYS 12 560 560 LYS LYS A . n A 1 13 LEU 13 561 561 LEU LEU A . n A 1 14 LEU 14 562 562 LEU LEU A . n A 1 15 GLU 15 563 563 GLU GLU A . n A 1 16 GLN 16 564 564 GLN GLN A . n A 1 17 ALA 17 565 565 ALA ALA A . n A 1 18 LEU 18 566 566 LEU LEU A . n A 1 19 LYS 19 567 567 LYS LYS A . n A 1 20 THR 20 568 568 THR THR A . n A 1 21 TYR 21 569 569 TYR TYR A . n A 1 22 PRO 22 570 570 PRO PRO A . n A 1 23 VAL 23 571 571 VAL VAL A . n A 1 24 ASN 24 572 572 ASN ASN A . n A 1 25 THR 25 573 573 THR THR A . n A 1 26 PRO 26 574 574 PRO PRO A . n A 1 27 GLU 27 575 575 GLU GLU A . n A 1 28 ARG 28 576 576 ARG ARG A . n A 1 29 TRP 29 577 577 TRP TRP A . n A 1 30 LYS 30 578 578 LYS LYS A . n A 1 31 LYS 31 579 579 LYS LYS A . n A 1 32 ILE 32 580 580 ILE ILE A . n A 1 33 ALA 33 581 581 ALA ALA A . n A 1 34 GLU 34 582 582 GLU GLU A . n A 1 35 ALA 35 583 583 ALA ALA A . n A 1 36 VAL 36 584 584 VAL VAL A . n A 1 37 PRO 37 585 585 PRO PRO A . n A 1 38 GLY 38 586 586 GLY GLY A . n A 1 39 ARG 39 587 587 ARG ARG A . n A 1 40 THR 40 588 588 THR THR A . n A 1 41 LYS 41 589 589 LYS LYS A . n A 1 42 LYS 42 590 590 LYS LYS A . n A 1 43 ASP 43 591 591 ASP ASP A . n A 1 44 CYS 44 592 592 CYS CYS A . n A 1 45 MET 45 593 593 MET MET A . n A 1 46 LYS 46 594 594 LYS LYS A . n A 1 47 ARG 47 595 595 ARG ARG A . n A 1 48 TYR 48 596 596 TYR TYR A . n A 1 49 LYS 49 597 597 LYS LYS A . n A 1 50 GLU 50 598 598 GLU GLU A . n A 1 51 LEU 51 599 599 LEU LEU A . n A 1 52 VAL 52 600 600 VAL VAL A . n A 1 53 GLU 53 601 601 GLU GLU A . n A 1 54 MET 54 602 602 MET MET A . n A 1 55 VAL 55 603 603 VAL VAL A . n A 1 56 LYS 56 604 604 LYS LYS A . n A 1 57 ALA 57 605 605 ALA ALA A . n A 1 58 LYS 58 606 606 LYS LYS A . n A 1 59 LYS 59 607 607 LYS LYS A . n A 1 60 ALA 60 608 608 ALA ALA A . n A 1 61 ALA 61 609 609 ALA ALA A . n A 1 62 GLN 62 610 610 GLN GLN A . n A 1 63 GLU 63 611 611 GLU GLU A . n A 1 64 GLN 64 612 612 GLN GLN A . n A 1 65 VAL 65 613 613 VAL VAL A . n A 1 66 LEU 66 614 614 LEU LEU A . n A 1 67 ASN 67 615 615 ASN ASN A . n A 1 68 ALA 68 616 616 ALA ALA A . n A 1 69 SER 69 617 617 SER SER A . n A 1 70 ARG 70 618 618 ARG ARG A . n A 1 71 ALA 71 619 619 ALA ALA A . n A 1 72 LYS 72 620 620 LYS LYS A . n A 1 73 LYS 73 621 621 LYS LYS A . n # loop_ _pdbx_SG_project.full_name_of_center _pdbx_SG_project.id _pdbx_SG_project.initial_of_center _pdbx_SG_project.project_name 'Northeast Structural Genomics Consortium' 1 NESG PSI:Biology 'Structural Genomics Consortium' 2 SGC ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-02-20 2 'Structure model' 1 1 2013-10-30 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' pdbx_nmr_spectrometer 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_pdbx_nmr_software.name' 5 3 'Structure model' '_pdbx_nmr_spectrometer.model' 6 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id entity-1 0.5 ? mM '[U-13C; U-15N]' 1 TRIS-2 10 ? mM ? 1 'sodium chloride-3' 300 ? mM ? 1 ZnSO4-4 10 ? uM ? 1 DTT-5 10 ? mM ? 1 NaN3-6 0.01 ? % ? 1 benzamidine-7 1 ? mM ? 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 553 ? ? -69.78 -173.18 2 1 TRP A 554 ? ? -63.51 90.91 3 3 TRP A 554 ? ? -56.35 109.59 4 4 LYS A 620 ? ? -82.71 -79.79 5 5 PRO A 553 ? ? -69.08 -179.48 6 5 ALA A 619 ? ? -79.54 44.10 7 6 TRP A 554 ? ? -66.51 94.80 8 8 PRO A 553 ? ? -83.54 -157.88 9 8 LYS A 620 ? ? 66.92 113.73 10 10 ALA A 619 ? ? -69.59 93.51 11 11 LYS A 620 ? ? -141.74 15.01 12 12 GLN A 610 ? ? -91.78 -63.62 13 14 TRP A 554 ? ? -60.99 97.30 14 15 PRO A 553 ? ? -69.25 -179.50 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 11 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 595 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.076 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 621 ? O ? A LYS 73 O 2 2 Y 1 A LYS 621 ? O ? A LYS 73 O 3 3 Y 1 A LYS 621 ? O ? A LYS 73 O 4 4 Y 1 A LYS 621 ? O ? A LYS 73 O 5 5 Y 1 A LYS 621 ? O ? A LYS 73 O 6 6 Y 1 A LYS 621 ? O ? A LYS 73 O 7 7 Y 1 A LYS 621 ? O ? A LYS 73 O 8 8 Y 1 A LYS 621 ? O ? A LYS 73 O 9 9 Y 1 A LYS 621 ? O ? A LYS 73 O 10 10 Y 1 A LYS 621 ? O ? A LYS 73 O 11 11 Y 1 A LYS 621 ? O ? A LYS 73 O 12 12 Y 1 A LYS 621 ? O ? A LYS 73 O 13 13 Y 1 A LYS 621 ? O ? A LYS 73 O 14 14 Y 1 A LYS 621 ? O ? A LYS 73 O 15 15 Y 1 A LYS 621 ? O ? A LYS 73 O 16 16 Y 1 A LYS 621 ? O ? A LYS 73 O 17 17 Y 1 A LYS 621 ? O ? A LYS 73 O 18 18 Y 1 A LYS 621 ? O ? A LYS 73 O 19 19 Y 1 A LYS 621 ? O ? A LYS 73 O 20 20 Y 1 A LYS 621 ? O ? A LYS 73 O # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 549 ? A GLN 1 2 1 Y 1 A GLY 550 ? A GLY 2 3 2 Y 1 A GLN 549 ? A GLN 1 4 2 Y 1 A GLY 550 ? A GLY 2 5 3 Y 1 A GLN 549 ? A GLN 1 6 3 Y 1 A GLY 550 ? A GLY 2 7 4 Y 1 A GLN 549 ? A GLN 1 8 4 Y 1 A GLY 550 ? A GLY 2 9 5 Y 1 A GLN 549 ? A GLN 1 10 5 Y 1 A GLY 550 ? A GLY 2 11 6 Y 1 A GLN 549 ? A GLN 1 12 6 Y 1 A GLY 550 ? A GLY 2 13 7 Y 1 A GLN 549 ? A GLN 1 14 7 Y 1 A GLY 550 ? A GLY 2 15 8 Y 1 A GLN 549 ? A GLN 1 16 8 Y 1 A GLY 550 ? A GLY 2 17 9 Y 1 A GLN 549 ? A GLN 1 18 9 Y 1 A GLY 550 ? A GLY 2 19 10 Y 1 A GLN 549 ? A GLN 1 20 10 Y 1 A GLY 550 ? A GLY 2 21 11 Y 1 A GLN 549 ? A GLN 1 22 11 Y 1 A GLY 550 ? A GLY 2 23 12 Y 1 A GLN 549 ? A GLN 1 24 12 Y 1 A GLY 550 ? A GLY 2 25 13 Y 1 A GLN 549 ? A GLN 1 26 13 Y 1 A GLY 550 ? A GLY 2 27 14 Y 1 A GLN 549 ? A GLN 1 28 14 Y 1 A GLY 550 ? A GLY 2 29 15 Y 1 A GLN 549 ? A GLN 1 30 15 Y 1 A GLY 550 ? A GLY 2 31 16 Y 1 A GLN 549 ? A GLN 1 32 16 Y 1 A GLY 550 ? A GLY 2 33 17 Y 1 A GLN 549 ? A GLN 1 34 17 Y 1 A GLY 550 ? A GLY 2 35 18 Y 1 A GLN 549 ? A GLN 1 36 18 Y 1 A GLY 550 ? A GLY 2 37 19 Y 1 A GLN 549 ? A GLN 1 38 19 Y 1 A GLY 550 ? A GLY 2 39 20 Y 1 A GLN 549 ? A GLN 1 40 20 Y 1 A GLY 550 ? A GLY 2 #