HEADER IMMUNE SYSTEM 05-FEB-13 2M4F TITLE SOLUTION STRUCTURE OF OUTER SURFACE PROTEIN E COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER SURFACE PROTEIN E; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 21-171; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BORRELIA BURGDORFERI; SOURCE 3 ORGANISM_TAXID: 521007; SOURCE 4 STRAIN: N40; SOURCE 5 GENE: BBUN40_O26; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ER2566; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PCARSF40 KEYWDS OSPE, OUTER SURFACE PROTEIN E, BORRELIA BURGDORFERI N40, BBCRASP-3, KEYWDS 2 ERP, COMPLEMENT, INNATE IMMUNITY, IMMUNE EVASION, IMMUNE SYSTEM EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.BHATTACHARJEE,J.S.OEEMIG,R.KOLODZIEJCZYK,T.MERI,T.KAJANDER,H.IWAI, AUTHOR 2 T.JOKIRANTA,A.GOLDMAN REVDAT 4 14-JUN-23 2M4F 1 REMARK REVDAT 3 29-NOV-17 2M4F 1 HELIX REVDAT 2 10-JUL-13 2M4F 1 JRNL REVDAT 1 15-MAY-13 2M4F 0 JRNL AUTH A.BHATTACHARJEE,J.S.OEEMIG,R.KOLODZIEJCZYK,T.MERI, JRNL AUTH 2 T.KAJANDER,M.J.LEHTINEN,H.IWAI,T.S.JOKIRANTA,A.GOLDMAN JRNL TITL STRUCTURAL BASIS FOR COMPLEMENT EVASION BY LYME DISEASE JRNL TITL 2 PATHOGEN BORRELIA BURGDORFERI JRNL REF J.BIOL.CHEM. V. 288 18685 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 23658013 JRNL DOI 10.1074/JBC.M113.459040 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER REMARK 3 AUTHORS : CASE, DARDEN, CHEATHAM, III, SIMMERLING, WANG, REMARK 3 DUKE, LUO, ... AND KOLLMAN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2M4F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1000103195. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6 REMARK 210 IONIC STRENGTH : 20 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-99% 13C; U-99% 15N] OSPE REMARK 210 -1, 20 MM SODIUM PHOSPHATE-2, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D HNCO; 3D HCACO; 3D REMARK 210 HNCA; 3D HN(CO)CA; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HBHA(CO)NH; 3D 1H- REMARK 210 15N TOCSY; 3D HCCH-COSY; 3D HCCH- REMARK 210 TOCSY; 3D 1H-13C NOESY ALIPHATIC; REMARK 210 3D 1H-15N NOESY; 3D C(CO)NH; REMARK 210 (HB)CB(CDCE)HE; (HB)CB(CD)HD REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CING, CYANA 3, NMRPIPE, VNMRJ, REMARK 210 CCPNMR ANALYSIS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 70 53.59 -109.88 REMARK 500 1 GLU A 116 36.35 72.14 REMARK 500 1 ASN A 122 -38.35 -144.54 REMARK 500 1 ILE A 136 -49.88 -131.15 REMARK 500 1 ASP A 137 29.42 -145.84 REMARK 500 1 SER A 152 -47.31 -132.48 REMARK 500 1 SER A 162 95.89 -63.82 REMARK 500 2 PHE A 41 -165.73 -77.26 REMARK 500 2 ASP A 137 16.06 59.02 REMARK 500 2 SER A 162 94.82 -63.71 REMARK 500 3 GLU A 33 51.34 -142.03 REMARK 500 3 ASP A 137 27.49 -148.34 REMARK 500 3 SER A 152 -34.22 -145.86 REMARK 500 3 SER A 162 97.39 -64.54 REMARK 500 4 GLU A 116 44.47 -77.19 REMARK 500 4 ASN A 122 -39.01 -140.05 REMARK 500 4 ASP A 154 22.09 -142.32 REMARK 500 4 SER A 162 95.46 -63.73 REMARK 500 5 GLN A 29 73.72 -103.59 REMARK 500 5 LYS A 35 54.72 -109.15 REMARK 500 5 SER A 105 89.35 -154.09 REMARK 500 5 SER A 162 94.74 -62.20 REMARK 500 6 TYR A 26 76.56 -119.02 REMARK 500 6 LYS A 38 117.13 -36.92 REMARK 500 6 ASN A 122 -16.85 -146.64 REMARK 500 6 ASP A 137 15.32 58.10 REMARK 500 6 ASP A 154 25.21 -140.22 REMARK 500 6 SER A 162 94.08 -62.11 REMARK 500 7 SER A 31 -40.07 -142.80 REMARK 500 7 ASN A 70 50.34 -93.37 REMARK 500 7 ASP A 137 15.45 57.78 REMARK 500 7 ASP A 154 22.22 -144.23 REMARK 500 7 SER A 162 99.20 -62.88 REMARK 500 8 SER A 31 -35.99 -131.48 REMARK 500 8 LYS A 35 66.51 -116.36 REMARK 500 8 VAL A 36 39.72 -78.96 REMARK 500 8 ASP A 137 32.01 -146.63 REMARK 500 8 ASP A 154 22.25 -140.95 REMARK 500 8 SER A 162 94.55 -65.78 REMARK 500 9 GLN A 29 103.37 -58.95 REMARK 500 9 ASP A 137 20.90 -144.22 REMARK 500 9 ASP A 154 21.07 -146.44 REMARK 500 9 SER A 162 95.81 -64.11 REMARK 500 10 GLU A 40 49.11 -96.06 REMARK 500 10 ASP A 154 33.92 -144.31 REMARK 500 10 SER A 162 97.40 -63.88 REMARK 500 11 SER A 31 -175.40 -66.98 REMARK 500 11 LYS A 37 -169.27 -122.55 REMARK 500 11 ASN A 122 -5.26 -142.63 REMARK 500 11 ASP A 137 15.60 -145.19 REMARK 500 REMARK 500 THIS ENTRY HAS 92 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 5 TYR A 111 0.08 SIDE CHAIN REMARK 500 19 TYR A 159 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19001 RELATED DB: BMRB REMARK 900 RELATED ID: 4J38 RELATED DB: PDB DBREF 2M4F A 21 171 UNP E4QGX1 E4QGX1_BORBN 21 171 SEQRES 1 A 151 LYS ILE HIS THR SER TYR ASP GLU GLN SER SER GLY GLU SEQRES 2 A 151 SER LYS VAL LYS LYS ILE GLU PHE SER LYS PHE THR VAL SEQRES 3 A 151 LYS ILE LYS ASN LYS ASP LYS SER GLY ASN TRP THR ASP SEQRES 4 A 151 LEU GLY ASP LEU VAL VAL ARG LYS GLU GLU ASN GLY ILE SEQRES 5 A 151 ASP THR GLY LEU ASN ALA GLY GLY HIS SER ALA THR PHE SEQRES 6 A 151 PHE SER LEU GLU GLU GLU VAL VAL ASN ASN PHE VAL LYS SEQRES 7 A 151 VAL MET THR GLU GLY GLY SER PHE LYS THR SER LEU TYR SEQRES 8 A 151 TYR GLY TYR LYS GLU GLU GLN SER VAL ILE ASN GLY ILE SEQRES 9 A 151 GLN ASN LYS GLU ILE ILE THR LYS ILE GLU LYS ILE ASP SEQRES 10 A 151 GLY THR GLU TYR ILE THR PHE SER GLY ASP LYS ILE LYS SEQRES 11 A 151 ASN SER GLY ASP LYS VAL ALA GLU TYR ALA ILE SER LEU SEQRES 12 A 151 GLU GLU LEU LYS LYS ASN LEU LYS HELIX 1 1 GLU A 89 GLU A 91 5 3 HELIX 2 2 VAL A 92 MET A 100 1 9 HELIX 3 3 LEU A 163 LYS A 171 1 9 SHEET 1 A10 GLY A 104 LYS A 107 0 SHEET 2 A10 GLU A 128 LYS A 135 -1 O THR A 131 N GLY A 104 SHEET 3 A10 GLU A 140 PHE A 144 -1 O THR A 143 N LYS A 132 SHEET 4 A10 TYR A 159 SER A 162 -1 O ILE A 161 N ILE A 142 SHEET 5 A10 LYS A 43 LYS A 51 -1 N LYS A 49 O ALA A 160 SHEET 6 A10 TRP A 57 LYS A 67 -1 O LEU A 63 N VAL A 46 SHEET 7 A10 ILE A 72 ASN A 77 -1 O GLY A 75 N VAL A 64 SHEET 8 A10 SER A 82 LEU A 88 -1 O LEU A 88 N ILE A 72 SHEET 9 A10 LEU A 110 TYR A 111 -1 O LEU A 110 N SER A 87 SHEET 10 A10 ILE A 124 GLN A 125 -1 O ILE A 124 N TYR A 111 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1