data_2M5J # _entry.id 2M5J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2M5J pdb_00002m5j 10.2210/pdb2m5j/pdb RCSB RCSB103235 ? ? BMRB 18201 ? ? WWPDB D_1000103235 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 18201 BMRB . unspecified 3CSL PDB . unspecified 3CSN PDB . unspecified 3DDR PDB . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2M5J _pdbx_database_status.methods_development_category ? _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2013-02-26 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Malki, I.' 1 'Cardoso de Amorim, G.' 2 'Prochnicka-Chalufour, A.' 3 'Simenel, C.' 4 'Delepierre, M.' 5 'Izadi-Pruneyre, N.' 6 # _citation.id primary _citation.title ;Interaction of a Partially Disordered Antisigma Factor with Its Partner, the Signaling Domain of the TonB-Dependent Transporter HasR ; _citation.journal_abbrev 'Plos One' _citation.journal_volume 9 _citation.page_first e89502 _citation.page_last e89502 _citation.year 2014 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24727671 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0089502 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Malki, I.' 1 ? primary 'Simenel, C.' 2 ? primary 'Wojtowicz, H.' 3 ? primary 'Cardoso de Amorim, G.' 4 ? primary 'Prochnicka-Chalufour, A.' 5 ? primary 'Hoos, S.' 6 ? primary 'Raynal, B.' 7 ? primary 'England, P.' 8 ? primary 'Chaffotte, A.' 9 ? primary 'Delepierre, M.' 10 ? primary 'Delepelaire, P.' 11 ? primary 'Izadi-Pruneyre, N.' 12 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'HasR protein' _entity.formula_weight 11106.586 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'UNP residues 42-146' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMAQAAQQKNFNIAAQPLQSAMLRFAEQAGMQVFFDEVKLDGMQAAALNGSMSVEQGLRRLIGGNPVAFRLQPQGQIVLS RLPTANGDGGALALDSLTVLGAGGNNA ; _entity_poly.pdbx_seq_one_letter_code_can ;SMAQAAQQKNFNIAAQPLQSAMLRFAEQAGMQVFFDEVKLDGMQAAALNGSMSVEQGLRRLIGGNPVAFRLQPQGQIVLS RLPTANGDGGALALDSLTVLGAGGNNA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ALA n 1 4 GLN n 1 5 ALA n 1 6 ALA n 1 7 GLN n 1 8 GLN n 1 9 LYS n 1 10 ASN n 1 11 PHE n 1 12 ASN n 1 13 ILE n 1 14 ALA n 1 15 ALA n 1 16 GLN n 1 17 PRO n 1 18 LEU n 1 19 GLN n 1 20 SER n 1 21 ALA n 1 22 MET n 1 23 LEU n 1 24 ARG n 1 25 PHE n 1 26 ALA n 1 27 GLU n 1 28 GLN n 1 29 ALA n 1 30 GLY n 1 31 MET n 1 32 GLN n 1 33 VAL n 1 34 PHE n 1 35 PHE n 1 36 ASP n 1 37 GLU n 1 38 VAL n 1 39 LYS n 1 40 LEU n 1 41 ASP n 1 42 GLY n 1 43 MET n 1 44 GLN n 1 45 ALA n 1 46 ALA n 1 47 ALA n 1 48 LEU n 1 49 ASN n 1 50 GLY n 1 51 SER n 1 52 MET n 1 53 SER n 1 54 VAL n 1 55 GLU n 1 56 GLN n 1 57 GLY n 1 58 LEU n 1 59 ARG n 1 60 ARG n 1 61 LEU n 1 62 ILE n 1 63 GLY n 1 64 GLY n 1 65 ASN n 1 66 PRO n 1 67 VAL n 1 68 ALA n 1 69 PHE n 1 70 ARG n 1 71 LEU n 1 72 GLN n 1 73 PRO n 1 74 GLN n 1 75 GLY n 1 76 GLN n 1 77 ILE n 1 78 VAL n 1 79 LEU n 1 80 SER n 1 81 ARG n 1 82 LEU n 1 83 PRO n 1 84 THR n 1 85 ALA n 1 86 ASN n 1 87 GLY n 1 88 ASP n 1 89 GLY n 1 90 GLY n 1 91 ALA n 1 92 LEU n 1 93 ALA n 1 94 LEU n 1 95 ASP n 1 96 SER n 1 97 LEU n 1 98 THR n 1 99 VAL n 1 100 LEU n 1 101 GLY n 1 102 ALA n 1 103 GLY n 1 104 GLY n 1 105 ASN n 1 106 ASN n 1 107 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Serratia marcescens' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene hasR _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Serratia marcescens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 615 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector pET41 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q79AD2_SERMA _struct_ref.pdbx_db_accession Q79AD2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AQAAQQKNFNIAAQPLQSAMLRFAEQAGMQVFFDEVKLDGMQAAALNGSMSVEQGLRRLIGGNPVAFRLQPQGQIVLSRL PTANGDGGALALDSLTVLGAGGNNA ; _struct_ref.pdbx_align_begin 42 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2M5J _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 107 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q79AD2 _struct_ref_seq.db_align_beg 42 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 146 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 112 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2M5J SER A 1 ? UNP Q79AD2 ? ? 'expression tag' 6 1 1 2M5J MET A 2 ? UNP Q79AD2 ? ? 'expression tag' 7 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-13C HSQC' 1 3 1 '3D CBCA(CO)NH' 1 4 1 '3D HNCACB' 1 5 1 '3D HNCO' 1 6 1 '3D C(CO)NH' 1 7 1 '3D H(CCO)NH' 1 8 1 '3D HCCH-TOCSY' 1 9 1 '2D HbCbCgCdHd' 1 10 1 '2D HbCbCgCdCeHe' 1 11 1 '3D 1H-15N NOESY' 1 12 1 '3D 1H-13C NOESY aliphatic' 1 13 1 '3D 1H-13C NOESY aromatic' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.1 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents ;0.5 mM [U-99% 13C; U-99% 15N] HasR_N-terminal_periplasmic_signaling_domain-1, 50 mM Sodium phosphate-2, 50 mM NaCl-3, 85% H2O/15% D2O ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '85% H2O/15% D2O' # _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model 'NMR System' _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Varian NMR System' # _pdbx_nmr_refine.entry_id 2M5J _pdbx_nmr_refine.method 'simulated annealing, torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 400 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2M5J _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 6 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2M5J _pdbx_nmr_representative.selection_criteria 'representative secondary structure' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.ordinal _pdbx_nmr_software.version CCPN 'chemical shift assignment' 'CcpNmr Analysis' 1 2.15 'Brunger, Adams, Clore, Gros, Nilges and Read' 'structure solution' CNS 2 1.2 ;Linge, O'Donoghue and Nilges ; 'structure solution' ARIA 3 2.3 ;Linge, O'Donoghue and Nilges ; refinement ARIA 4 2.3 ? refinement CNS 5 ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details 'HasR N-terminal periplasmic signaling domain' _exptl.entry_id 2M5J _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2M5J _struct.title 'Solution structure of the periplasmic signaling domain of HasR, a TonB-dependent outer membrane heme transporter' _struct.pdbx_model_details 'representative secondary structure, model6' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2M5J _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'signaling domain, TonB dependent transporter, SIGNALING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 17 ? GLY A 30 ? PRO A 22 GLY A 35 1 ? 14 HELX_P HELX_P2 2 SER A 53 ? GLY A 63 ? SER A 58 GLY A 68 1 ? 11 HELX_P HELX_P3 3 LEU A 94 ? VAL A 99 ? LEU A 99 VAL A 104 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 9 ? ILE A 13 ? LYS A 14 ILE A 18 A 2 LEU A 48 ? MET A 52 ? LEU A 53 MET A 57 B 1 GLN A 32 ? PHE A 34 ? GLN A 37 PHE A 39 B 2 GLN A 76 ? SER A 80 ? GLN A 81 SER A 85 B 3 ALA A 68 ? ARG A 70 ? ALA A 73 ARG A 75 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 11 ? N PHE A 16 O GLY A 50 ? O GLY A 55 B 1 2 N GLN A 32 ? N GLN A 37 O ILE A 77 ? O ILE A 82 B 2 3 O SER A 80 ? O SER A 85 N ALA A 68 ? N ALA A 73 # _atom_sites.entry_id 2M5J _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 6 6 SER SER A . n A 1 2 MET 2 7 7 MET MET A . n A 1 3 ALA 3 8 8 ALA ALA A . n A 1 4 GLN 4 9 9 GLN GLN A . n A 1 5 ALA 5 10 10 ALA ALA A . n A 1 6 ALA 6 11 11 ALA ALA A . n A 1 7 GLN 7 12 12 GLN GLN A . n A 1 8 GLN 8 13 13 GLN GLN A . n A 1 9 LYS 9 14 14 LYS LYS A . n A 1 10 ASN 10 15 15 ASN ASN A . n A 1 11 PHE 11 16 16 PHE PHE A . n A 1 12 ASN 12 17 17 ASN ASN A . n A 1 13 ILE 13 18 18 ILE ILE A . n A 1 14 ALA 14 19 19 ALA ALA A . n A 1 15 ALA 15 20 20 ALA ALA A . n A 1 16 GLN 16 21 21 GLN GLN A . n A 1 17 PRO 17 22 22 PRO PRO A . n A 1 18 LEU 18 23 23 LEU LEU A . n A 1 19 GLN 19 24 24 GLN GLN A . n A 1 20 SER 20 25 25 SER SER A . n A 1 21 ALA 21 26 26 ALA ALA A . n A 1 22 MET 22 27 27 MET MET A . n A 1 23 LEU 23 28 28 LEU LEU A . n A 1 24 ARG 24 29 29 ARG ARG A . n A 1 25 PHE 25 30 30 PHE PHE A . n A 1 26 ALA 26 31 31 ALA ALA A . n A 1 27 GLU 27 32 32 GLU GLU A . n A 1 28 GLN 28 33 33 GLN GLN A . n A 1 29 ALA 29 34 34 ALA ALA A . n A 1 30 GLY 30 35 35 GLY GLY A . n A 1 31 MET 31 36 36 MET MET A . n A 1 32 GLN 32 37 37 GLN GLN A . n A 1 33 VAL 33 38 38 VAL VAL A . n A 1 34 PHE 34 39 39 PHE PHE A . n A 1 35 PHE 35 40 40 PHE PHE A . n A 1 36 ASP 36 41 41 ASP ASP A . n A 1 37 GLU 37 42 42 GLU GLU A . n A 1 38 VAL 38 43 43 VAL VAL A . n A 1 39 LYS 39 44 44 LYS LYS A . n A 1 40 LEU 40 45 45 LEU LEU A . n A 1 41 ASP 41 46 46 ASP ASP A . n A 1 42 GLY 42 47 47 GLY GLY A . n A 1 43 MET 43 48 48 MET MET A . n A 1 44 GLN 44 49 49 GLN GLN A . n A 1 45 ALA 45 50 50 ALA ALA A . n A 1 46 ALA 46 51 51 ALA ALA A . n A 1 47 ALA 47 52 52 ALA ALA A . n A 1 48 LEU 48 53 53 LEU LEU A . n A 1 49 ASN 49 54 54 ASN ASN A . n A 1 50 GLY 50 55 55 GLY GLY A . n A 1 51 SER 51 56 56 SER SER A . n A 1 52 MET 52 57 57 MET MET A . n A 1 53 SER 53 58 58 SER SER A . n A 1 54 VAL 54 59 59 VAL VAL A . n A 1 55 GLU 55 60 60 GLU GLU A . n A 1 56 GLN 56 61 61 GLN GLN A . n A 1 57 GLY 57 62 62 GLY GLY A . n A 1 58 LEU 58 63 63 LEU LEU A . n A 1 59 ARG 59 64 64 ARG ARG A . n A 1 60 ARG 60 65 65 ARG ARG A . n A 1 61 LEU 61 66 66 LEU LEU A . n A 1 62 ILE 62 67 67 ILE ILE A . n A 1 63 GLY 63 68 68 GLY GLY A . n A 1 64 GLY 64 69 69 GLY GLY A . n A 1 65 ASN 65 70 70 ASN ASN A . n A 1 66 PRO 66 71 71 PRO PRO A . n A 1 67 VAL 67 72 72 VAL VAL A . n A 1 68 ALA 68 73 73 ALA ALA A . n A 1 69 PHE 69 74 74 PHE PHE A . n A 1 70 ARG 70 75 75 ARG ARG A . n A 1 71 LEU 71 76 76 LEU LEU A . n A 1 72 GLN 72 77 77 GLN GLN A . n A 1 73 PRO 73 78 78 PRO PRO A . n A 1 74 GLN 74 79 79 GLN GLN A . n A 1 75 GLY 75 80 80 GLY GLY A . n A 1 76 GLN 76 81 81 GLN GLN A . n A 1 77 ILE 77 82 82 ILE ILE A . n A 1 78 VAL 78 83 83 VAL VAL A . n A 1 79 LEU 79 84 84 LEU LEU A . n A 1 80 SER 80 85 85 SER SER A . n A 1 81 ARG 81 86 86 ARG ARG A . n A 1 82 LEU 82 87 87 LEU LEU A . n A 1 83 PRO 83 88 88 PRO PRO A . n A 1 84 THR 84 89 89 THR THR A . n A 1 85 ALA 85 90 90 ALA ALA A . n A 1 86 ASN 86 91 91 ASN ASN A . n A 1 87 GLY 87 92 92 GLY GLY A . n A 1 88 ASP 88 93 93 ASP ASP A . n A 1 89 GLY 89 94 94 GLY GLY A . n A 1 90 GLY 90 95 95 GLY GLY A . n A 1 91 ALA 91 96 96 ALA ALA A . n A 1 92 LEU 92 97 97 LEU LEU A . n A 1 93 ALA 93 98 98 ALA ALA A . n A 1 94 LEU 94 99 99 LEU LEU A . n A 1 95 ASP 95 100 100 ASP ASP A . n A 1 96 SER 96 101 101 SER SER A . n A 1 97 LEU 97 102 102 LEU LEU A . n A 1 98 THR 98 103 103 THR THR A . n A 1 99 VAL 99 104 104 VAL VAL A . n A 1 100 LEU 100 105 105 LEU LEU A . n A 1 101 GLY 101 106 106 GLY GLY A . n A 1 102 ALA 102 107 107 ALA ALA A . n A 1 103 GLY 103 108 108 GLY GLY A . n A 1 104 GLY 104 109 109 GLY GLY A . n A 1 105 ASN 105 110 110 ASN ASN A . n A 1 106 ASN 106 111 111 ASN ASN A . n A 1 107 ALA 107 112 112 ALA ALA A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-03-05 2 'Structure model' 1 1 2014-04-23 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_pdbx_nmr_software.name' 5 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id HasR_N-terminal_periplasmic_signaling_domain-1 0.5 ? mM '[U-99% 13C; U-99% 15N]' 1 'Sodium phosphate-2' 50 ? mM ? 1 NaCl-3 50 ? mM ? 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 6 HZ3 A LYS 44 ? ? OXT A ALA 112 ? ? 1.60 2 11 HH21 A ARG 64 ? ? OXT A ALA 112 ? ? 1.60 3 15 O A ILE 67 ? ? H A GLY 69 ? ? 1.47 4 16 H2 A SER 6 ? ? OE1 A GLU 60 ? ? 1.60 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 41 ? ? -121.42 -61.23 2 1 ASP A 46 ? ? -36.16 136.63 3 1 ALA A 52 ? ? -69.52 89.42 4 1 PRO A 71 ? ? -64.35 98.15 5 1 LEU A 97 ? ? -109.25 -169.90 6 1 ALA A 98 ? ? 73.63 -53.91 7 2 GLU A 42 ? ? -68.20 89.19 8 2 PRO A 71 ? ? -58.44 99.29 9 2 THR A 89 ? ? -58.57 106.78 10 2 ASN A 91 ? ? -130.20 -49.37 11 2 ALA A 98 ? ? 74.80 -49.62 12 2 LEU A 105 ? ? -102.85 -70.06 13 3 ASP A 41 ? ? -114.98 -85.72 14 3 ALA A 52 ? ? -66.80 89.96 15 3 LEU A 105 ? ? 74.08 -40.74 16 4 ASP A 41 ? ? -125.93 -69.11 17 4 THR A 89 ? ? -69.05 97.85 18 4 LEU A 97 ? ? 157.02 -33.12 19 4 ASN A 110 ? ? -97.09 -73.95 20 5 ALA A 11 ? ? 69.11 -79.23 21 5 PRO A 71 ? ? -63.35 97.87 22 5 PRO A 88 ? ? -69.30 -146.31 23 5 ASP A 100 ? ? -98.24 -70.17 24 5 ASN A 111 ? ? -85.83 49.06 25 6 ASP A 41 ? ? -94.36 -147.60 26 6 VAL A 43 ? ? -129.40 -165.23 27 6 MET A 57 ? ? -167.15 -165.53 28 6 ILE A 67 ? ? -90.21 -65.65 29 6 LEU A 105 ? ? 178.70 -32.67 30 7 ALA A 11 ? ? 66.84 84.17 31 7 ASP A 41 ? ? -82.36 -70.60 32 7 PRO A 78 ? ? -68.11 9.40 33 8 MET A 7 ? ? -128.06 -62.19 34 8 ILE A 67 ? ? -90.46 -64.80 35 8 PRO A 71 ? ? -64.01 97.37 36 8 ALA A 98 ? ? 74.68 -42.15 37 9 LEU A 97 ? ? -74.18 38.47 38 10 ASP A 41 ? ? -130.88 -68.06 39 10 ALA A 52 ? ? -68.85 89.99 40 10 ASN A 54 ? ? -160.34 100.00 41 10 PRO A 71 ? ? -66.53 99.95 42 10 PRO A 88 ? ? -68.91 -160.95 43 10 LEU A 97 ? ? 57.81 -147.30 44 10 ALA A 98 ? ? 71.65 -67.27 45 10 ASN A 110 ? ? -165.12 119.24 46 11 ALA A 11 ? ? 67.85 106.12 47 11 ASP A 41 ? ? -125.88 -61.50 48 11 LYS A 44 ? ? -150.57 89.81 49 11 GLU A 60 ? ? -50.31 -70.22 50 11 PRO A 71 ? ? -59.25 97.72 51 11 ARG A 86 ? ? -102.70 76.38 52 11 ALA A 98 ? ? 71.03 -57.61 53 12 ALA A 11 ? ? -119.59 58.02 54 12 ASP A 41 ? ? -73.62 -168.63 55 12 GLU A 42 ? ? -62.35 94.53 56 12 PRO A 71 ? ? -67.31 95.45 57 12 PRO A 88 ? ? -77.09 -150.89 58 12 THR A 89 ? ? -35.86 114.04 59 12 LEU A 99 ? ? -149.09 -76.87 60 12 ASP A 100 ? ? -106.97 -73.38 61 12 SER A 101 ? ? -102.89 -70.32 62 12 LEU A 102 ? ? -114.28 -72.27 63 12 THR A 103 ? ? -130.90 -45.03 64 12 ASN A 111 ? ? -86.41 49.48 65 13 MET A 7 ? ? -163.54 -40.39 66 13 ASP A 41 ? ? -83.77 -159.64 67 13 GLU A 42 ? ? -67.34 89.07 68 13 ALA A 52 ? ? -69.30 92.68 69 13 ILE A 67 ? ? -90.05 -63.56 70 13 PRO A 71 ? ? -64.69 98.21 71 13 PRO A 88 ? ? -69.28 -161.12 72 14 ALA A 11 ? ? 64.16 -171.99 73 14 VAL A 43 ? ? -165.04 119.83 74 14 PRO A 71 ? ? -63.73 98.59 75 14 LEU A 97 ? ? 63.81 -168.75 76 14 ALA A 98 ? ? 70.88 -57.89 77 14 LEU A 105 ? ? 66.16 -72.97 78 15 ALA A 11 ? ? 67.69 -77.20 79 15 ASP A 41 ? ? -81.81 -87.39 80 15 ALA A 52 ? ? -55.49 109.34 81 15 PRO A 71 ? ? -67.12 94.18 82 15 PRO A 78 ? ? -63.28 3.18 83 15 PRO A 88 ? ? -59.46 95.96 84 15 LEU A 105 ? ? 69.83 -64.24 85 15 ASN A 111 ? ? -173.78 -32.98 86 16 ALA A 52 ? ? -64.80 97.10 87 16 GLU A 60 ? ? -52.35 -70.64 88 16 PRO A 71 ? ? -59.08 103.24 89 16 ASN A 110 ? ? 161.23 137.44 90 17 GLU A 42 ? ? -62.53 95.79 91 17 ALA A 52 ? ? -64.67 97.13 92 17 ARG A 86 ? ? -102.78 78.02 93 17 LEU A 97 ? ? 66.92 -161.07 94 17 ALA A 98 ? ? 71.96 -52.24 95 17 LEU A 105 ? ? -163.38 -29.25 96 18 MET A 7 ? ? 62.32 76.00 97 18 ALA A 11 ? ? -79.53 47.66 98 18 GLU A 42 ? ? -67.35 89.48 99 18 ALA A 52 ? ? -69.27 89.33 100 18 PRO A 71 ? ? -60.18 98.81 101 18 ASN A 91 ? ? -131.16 -37.69 102 18 ALA A 96 ? ? -57.69 108.08 103 18 LEU A 97 ? ? 74.89 -22.71 104 18 LEU A 105 ? ? 60.44 88.98 105 18 ASN A 111 ? ? -112.12 58.06 106 19 ALA A 11 ? ? 67.85 101.97 107 19 GLU A 42 ? ? -69.99 92.15 108 19 PRO A 78 ? ? -59.58 -9.86 109 19 LEU A 105 ? ? -69.22 97.86 110 20 ALA A 11 ? ? 54.19 75.42 111 20 ASP A 41 ? ? -123.36 -56.28 112 20 ALA A 52 ? ? -65.05 95.74 113 20 PRO A 71 ? ? -55.92 99.60 114 20 THR A 103 ? ? -131.44 -62.24 115 20 ASN A 111 ? ? -91.38 45.51 #