data_2M5N # _entry.id 2M5N # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2M5N pdb_00002m5n 10.2210/pdb2m5n/pdb RCSB RCSB103239 ? ? BMRB 19062 ? 10.13018/BMR19062 WWPDB D_1000103239 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-07-17 2 'Structure model' 1 1 2023-06-14 3 'Structure model' 1 2 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' Other 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' pdbx_database_status 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2M5N _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-02-27 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 19062 BMRB unspecified . 3ZPK PDB unspecified . 2M5K PDB unspecified . 2M5M PDB unspecified . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fitzpatrick, A.W.P.' 1 'Debelouchina, G.T.' 2 'Bayro, M.J.' 3 'Clare, D.K.' 4 'Caporini, M.A.' 5 'Bajaj, V.S.' 6 'Jaroniec, C.P.' 7 'Wang, L.' 8 'Ladizhansky, V.' 9 'Muller, S.' 10 'MacPhee, C.E.' 11 'Waudby, C.A.' 12 'Mott, H.R.' 13 'de Simone, A.' 14 'Knowles, T.P.J.' 15 'Saibil, H.R.' 16 'Vendruscolo, M.' 17 'Orlova, E.V.' 18 'Griffin, R.G.' 19 'Dobson, C.M.' 20 # _citation.id primary _citation.title 'Atomic structure and hierarchical assembly of a cross-{beta} amyloid fibril.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 110 _citation.page_first 5468 _citation.page_last 5473 _citation.year 2013 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23513222 _citation.pdbx_database_id_DOI 10.1073/pnas.1219476110 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fitzpatrick, A.W.' 1 ? primary 'Debelouchina, G.T.' 2 ? primary 'Bayro, M.J.' 3 ? primary 'Clare, D.K.' 4 ? primary 'Caporini, M.A.' 5 ? primary 'Bajaj, V.S.' 6 ? primary 'Jaroniec, C.P.' 7 ? primary 'Wang, L.' 8 ? primary 'Ladizhansky, V.' 9 ? primary 'Muller, S.A.' 10 ? primary 'MacPhee, C.E.' 11 ? primary 'Waudby, C.A.' 12 ? primary 'Mott, H.R.' 13 ? primary 'De Simone, A.' 14 ? primary 'Knowles, T.P.' 15 ? primary 'Saibil, H.R.' 16 ? primary 'Vendruscolo, M.' 17 ? primary 'Orlova, E.V.' 18 ? primary 'Griffin, R.G.' 19 ? primary 'Dobson, C.M.' 20 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description Transthyretin _entity.formula_weight 1198.366 _entity.pdbx_number_of_molecules 16 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'UNP residues 125-135' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TTR, ATTR, Prealbumin, TBPA' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code YTIAALLSPYS _entity_poly.pdbx_seq_one_letter_code_can YTIAALLSPYS _entity_poly.pdbx_strand_id A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TYR n 1 2 THR n 1 3 ILE n 1 4 ALA n 1 5 ALA n 1 6 LEU n 1 7 LEU n 1 8 SER n 1 9 PRO n 1 10 TYR n 1 11 SER n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TYR 1 1 1 TYR TYR A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 TYR 10 10 10 TYR TYR A . n A 1 11 SER 11 11 11 SER SER A . n B 1 1 TYR 1 1 1 TYR TYR B . n B 1 2 THR 2 2 2 THR THR B . n B 1 3 ILE 3 3 3 ILE ILE B . n B 1 4 ALA 4 4 4 ALA ALA B . n B 1 5 ALA 5 5 5 ALA ALA B . n B 1 6 LEU 6 6 6 LEU LEU B . n B 1 7 LEU 7 7 7 LEU LEU B . n B 1 8 SER 8 8 8 SER SER B . n B 1 9 PRO 9 9 9 PRO PRO B . n B 1 10 TYR 10 10 10 TYR TYR B . n B 1 11 SER 11 11 11 SER SER B . n C 1 1 TYR 1 1 1 TYR TYR C . n C 1 2 THR 2 2 2 THR THR C . n C 1 3 ILE 3 3 3 ILE ILE C . n C 1 4 ALA 4 4 4 ALA ALA C . n C 1 5 ALA 5 5 5 ALA ALA C . n C 1 6 LEU 6 6 6 LEU LEU C . n C 1 7 LEU 7 7 7 LEU LEU C . n C 1 8 SER 8 8 8 SER SER C . n C 1 9 PRO 9 9 9 PRO PRO C . n C 1 10 TYR 10 10 10 TYR TYR C . n C 1 11 SER 11 11 11 SER SER C . n D 1 1 TYR 1 1 1 TYR TYR D . n D 1 2 THR 2 2 2 THR THR D . n D 1 3 ILE 3 3 3 ILE ILE D . n D 1 4 ALA 4 4 4 ALA ALA D . n D 1 5 ALA 5 5 5 ALA ALA D . n D 1 6 LEU 6 6 6 LEU LEU D . n D 1 7 LEU 7 7 7 LEU LEU D . n D 1 8 SER 8 8 8 SER SER D . n D 1 9 PRO 9 9 9 PRO PRO D . n D 1 10 TYR 10 10 10 TYR TYR D . n D 1 11 SER 11 11 11 SER SER D . n E 1 1 TYR 1 1 1 TYR TYR E . n E 1 2 THR 2 2 2 THR THR E . n E 1 3 ILE 3 3 3 ILE ILE E . n E 1 4 ALA 4 4 4 ALA ALA E . n E 1 5 ALA 5 5 5 ALA ALA E . n E 1 6 LEU 6 6 6 LEU LEU E . n E 1 7 LEU 7 7 7 LEU LEU E . n E 1 8 SER 8 8 8 SER SER E . n E 1 9 PRO 9 9 9 PRO PRO E . n E 1 10 TYR 10 10 10 TYR TYR E . n E 1 11 SER 11 11 11 SER SER E . n F 1 1 TYR 1 1 1 TYR TYR F . n F 1 2 THR 2 2 2 THR THR F . n F 1 3 ILE 3 3 3 ILE ILE F . n F 1 4 ALA 4 4 4 ALA ALA F . n F 1 5 ALA 5 5 5 ALA ALA F . n F 1 6 LEU 6 6 6 LEU LEU F . n F 1 7 LEU 7 7 7 LEU LEU F . n F 1 8 SER 8 8 8 SER SER F . n F 1 9 PRO 9 9 9 PRO PRO F . n F 1 10 TYR 10 10 10 TYR TYR F . n F 1 11 SER 11 11 11 SER SER F . n G 1 1 TYR 1 1 1 TYR TYR G . n G 1 2 THR 2 2 2 THR THR G . n G 1 3 ILE 3 3 3 ILE ILE G . n G 1 4 ALA 4 4 4 ALA ALA G . n G 1 5 ALA 5 5 5 ALA ALA G . n G 1 6 LEU 6 6 6 LEU LEU G . n G 1 7 LEU 7 7 7 LEU LEU G . n G 1 8 SER 8 8 8 SER SER G . n G 1 9 PRO 9 9 9 PRO PRO G . n G 1 10 TYR 10 10 10 TYR TYR G . n G 1 11 SER 11 11 11 SER SER G . n H 1 1 TYR 1 1 1 TYR TYR H . n H 1 2 THR 2 2 2 THR THR H . n H 1 3 ILE 3 3 3 ILE ILE H . n H 1 4 ALA 4 4 4 ALA ALA H . n H 1 5 ALA 5 5 5 ALA ALA H . n H 1 6 LEU 6 6 6 LEU LEU H . n H 1 7 LEU 7 7 7 LEU LEU H . n H 1 8 SER 8 8 8 SER SER H . n H 1 9 PRO 9 9 9 PRO PRO H . n H 1 10 TYR 10 10 10 TYR TYR H . n H 1 11 SER 11 11 11 SER SER H . n I 1 1 TYR 1 1 1 TYR TYR I . n I 1 2 THR 2 2 2 THR THR I . n I 1 3 ILE 3 3 3 ILE ILE I . n I 1 4 ALA 4 4 4 ALA ALA I . n I 1 5 ALA 5 5 5 ALA ALA I . n I 1 6 LEU 6 6 6 LEU LEU I . n I 1 7 LEU 7 7 7 LEU LEU I . n I 1 8 SER 8 8 8 SER SER I . n I 1 9 PRO 9 9 9 PRO PRO I . n I 1 10 TYR 10 10 10 TYR TYR I . n I 1 11 SER 11 11 11 SER SER I . n J 1 1 TYR 1 1 1 TYR TYR J . n J 1 2 THR 2 2 2 THR THR J . n J 1 3 ILE 3 3 3 ILE ILE J . n J 1 4 ALA 4 4 4 ALA ALA J . n J 1 5 ALA 5 5 5 ALA ALA J . n J 1 6 LEU 6 6 6 LEU LEU J . n J 1 7 LEU 7 7 7 LEU LEU J . n J 1 8 SER 8 8 8 SER SER J . n J 1 9 PRO 9 9 9 PRO PRO J . n J 1 10 TYR 10 10 10 TYR TYR J . n J 1 11 SER 11 11 11 SER SER J . n K 1 1 TYR 1 1 1 TYR TYR K . n K 1 2 THR 2 2 2 THR THR K . n K 1 3 ILE 3 3 3 ILE ILE K . n K 1 4 ALA 4 4 4 ALA ALA K . n K 1 5 ALA 5 5 5 ALA ALA K . n K 1 6 LEU 6 6 6 LEU LEU K . n K 1 7 LEU 7 7 7 LEU LEU K . n K 1 8 SER 8 8 8 SER SER K . n K 1 9 PRO 9 9 9 PRO PRO K . n K 1 10 TYR 10 10 10 TYR TYR K . n K 1 11 SER 11 11 11 SER SER K . n L 1 1 TYR 1 1 1 TYR TYR L . n L 1 2 THR 2 2 2 THR THR L . n L 1 3 ILE 3 3 3 ILE ILE L . n L 1 4 ALA 4 4 4 ALA ALA L . n L 1 5 ALA 5 5 5 ALA ALA L . n L 1 6 LEU 6 6 6 LEU LEU L . n L 1 7 LEU 7 7 7 LEU LEU L . n L 1 8 SER 8 8 8 SER SER L . n L 1 9 PRO 9 9 9 PRO PRO L . n L 1 10 TYR 10 10 10 TYR TYR L . n L 1 11 SER 11 11 11 SER SER L . n M 1 1 TYR 1 1 1 TYR TYR M . n M 1 2 THR 2 2 2 THR THR M . n M 1 3 ILE 3 3 3 ILE ILE M . n M 1 4 ALA 4 4 4 ALA ALA M . n M 1 5 ALA 5 5 5 ALA ALA M . n M 1 6 LEU 6 6 6 LEU LEU M . n M 1 7 LEU 7 7 7 LEU LEU M . n M 1 8 SER 8 8 8 SER SER M . n M 1 9 PRO 9 9 9 PRO PRO M . n M 1 10 TYR 10 10 10 TYR TYR M . n M 1 11 SER 11 11 11 SER SER M . n N 1 1 TYR 1 1 1 TYR TYR N . n N 1 2 THR 2 2 2 THR THR N . n N 1 3 ILE 3 3 3 ILE ILE N . n N 1 4 ALA 4 4 4 ALA ALA N . n N 1 5 ALA 5 5 5 ALA ALA N . n N 1 6 LEU 6 6 6 LEU LEU N . n N 1 7 LEU 7 7 7 LEU LEU N . n N 1 8 SER 8 8 8 SER SER N . n N 1 9 PRO 9 9 9 PRO PRO N . n N 1 10 TYR 10 10 10 TYR TYR N . n N 1 11 SER 11 11 11 SER SER N . n O 1 1 TYR 1 1 1 TYR TYR O . n O 1 2 THR 2 2 2 THR THR O . n O 1 3 ILE 3 3 3 ILE ILE O . n O 1 4 ALA 4 4 4 ALA ALA O . n O 1 5 ALA 5 5 5 ALA ALA O . n O 1 6 LEU 6 6 6 LEU LEU O . n O 1 7 LEU 7 7 7 LEU LEU O . n O 1 8 SER 8 8 8 SER SER O . n O 1 9 PRO 9 9 9 PRO PRO O . n O 1 10 TYR 10 10 10 TYR TYR O . n O 1 11 SER 11 11 11 SER SER O . n P 1 1 TYR 1 1 1 TYR TYR P . n P 1 2 THR 2 2 2 THR THR P . n P 1 3 ILE 3 3 3 ILE ILE P . n P 1 4 ALA 4 4 4 ALA ALA P . n P 1 5 ALA 5 5 5 ALA ALA P . n P 1 6 LEU 6 6 6 LEU LEU P . n P 1 7 LEU 7 7 7 LEU LEU P . n P 1 8 SER 8 8 8 SER SER P . n P 1 9 PRO 9 9 9 PRO PRO P . n P 1 10 TYR 10 10 10 TYR TYR P . n P 1 11 SER 11 11 11 SER SER P . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2M5N _exptl.method 'SOLID-STATE NMR' _exptl.method_details ? # _struct.entry_id 2M5N _struct.title 'Atomic-resolution structure of a cross-beta protofilament' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2M5N _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' _struct_keywords.text 'Amyloid fibril, Cross-beta structure, PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 1 ? J N N 1 ? K N N 1 ? L N N 1 ? M N N 1 ? N N N 1 ? O N N 1 ? P N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TTHY_HUMAN _struct_ref.pdbx_db_accession P02766 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code YTIAALLSPYS _struct_ref.pdbx_align_begin 125 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2M5N A 1 ? 11 ? P02766 125 ? 135 ? 1 11 2 1 2M5N B 1 ? 11 ? P02766 125 ? 135 ? 1 11 3 1 2M5N C 1 ? 11 ? P02766 125 ? 135 ? 1 11 4 1 2M5N D 1 ? 11 ? P02766 125 ? 135 ? 1 11 5 1 2M5N E 1 ? 11 ? P02766 125 ? 135 ? 1 11 6 1 2M5N F 1 ? 11 ? P02766 125 ? 135 ? 1 11 7 1 2M5N G 1 ? 11 ? P02766 125 ? 135 ? 1 11 8 1 2M5N H 1 ? 11 ? P02766 125 ? 135 ? 1 11 9 1 2M5N I 1 ? 11 ? P02766 125 ? 135 ? 1 11 10 1 2M5N J 1 ? 11 ? P02766 125 ? 135 ? 1 11 11 1 2M5N K 1 ? 11 ? P02766 125 ? 135 ? 1 11 12 1 2M5N L 1 ? 11 ? P02766 125 ? 135 ? 1 11 13 1 2M5N M 1 ? 11 ? P02766 125 ? 135 ? 1 11 14 1 2M5N N 1 ? 11 ? P02766 125 ? 135 ? 1 11 15 1 2M5N O 1 ? 11 ? P02766 125 ? 135 ? 1 11 16 1 2M5N P 1 ? 11 ? P02766 125 ? 135 ? 1 11 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? parallel B 7 8 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 4 ? LEU A 7 ? ALA A 4 LEU A 7 A 2 THR B 2 ? LEU B 7 ? THR B 2 LEU B 7 A 3 THR C 2 ? LEU C 7 ? THR C 2 LEU C 7 A 4 THR D 2 ? LEU D 7 ? THR D 2 LEU D 7 A 5 THR E 2 ? LEU E 7 ? THR E 2 LEU E 7 A 6 THR F 2 ? LEU F 7 ? THR F 2 LEU F 7 A 7 THR G 2 ? LEU G 7 ? THR G 2 LEU G 7 A 8 THR H 2 ? LEU H 7 ? THR H 2 LEU H 7 B 1 ALA I 4 ? LEU I 7 ? ALA I 4 LEU I 7 B 2 THR J 2 ? LEU J 7 ? THR J 2 LEU J 7 B 3 THR K 2 ? LEU K 7 ? THR K 2 LEU K 7 B 4 THR L 2 ? LEU L 7 ? THR L 2 LEU L 7 B 5 THR M 2 ? LEU M 7 ? THR M 2 LEU M 7 B 6 THR N 2 ? LEU N 7 ? THR N 2 LEU N 7 B 7 THR O 2 ? LEU O 7 ? THR O 2 LEU O 7 B 8 THR P 2 ? LEU P 7 ? THR P 2 LEU P 7 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 6 ? N LEU A 6 O ALA B 5 ? O ALA B 5 A 2 3 N LEU B 6 ? N LEU B 6 O ALA C 5 ? O ALA C 5 A 3 4 N LEU C 6 ? N LEU C 6 O ALA D 5 ? O ALA D 5 A 4 5 N LEU D 6 ? N LEU D 6 O LEU E 7 ? O LEU E 7 A 5 6 N LEU E 6 ? N LEU E 6 O ALA F 5 ? O ALA F 5 A 6 7 N LEU F 6 ? N LEU F 6 O LEU G 7 ? O LEU G 7 A 7 8 N LEU G 6 ? N LEU G 6 O LEU H 7 ? O LEU H 7 B 1 2 N LEU I 7 ? N LEU I 7 O LEU J 6 ? O LEU J 6 B 2 3 N LEU J 7 ? N LEU J 7 O LEU K 6 ? O LEU K 6 B 3 4 N LEU K 7 ? N LEU K 7 O LEU L 6 ? O LEU L 6 B 4 5 N LEU L 7 ? N LEU L 7 O LEU M 6 ? O LEU M 6 B 5 6 N ALA M 5 ? N ALA M 5 O LEU N 6 ? O LEU N 6 B 6 7 N ALA N 5 ? N ALA N 5 O LEU O 6 ? O LEU O 6 B 7 8 N ALA O 5 ? N ALA O 5 O LEU P 6 ? O LEU P 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 11 SER A 8 ? ? -117.92 72.62 2 11 SER B 8 ? ? -117.61 72.59 3 11 SER C 8 ? ? -118.00 72.27 4 11 SER D 8 ? ? -118.23 72.14 5 11 SER E 8 ? ? -118.11 72.62 6 11 SER F 8 ? ? -118.20 72.28 7 11 SER G 8 ? ? -117.98 72.10 8 11 SER H 8 ? ? -118.38 71.66 9 11 SER I 8 ? ? -116.98 72.16 10 11 SER J 8 ? ? -116.88 72.08 11 11 SER K 8 ? ? -117.07 71.86 12 11 SER L 8 ? ? -117.39 72.23 13 11 SER M 8 ? ? -117.00 72.34 14 11 SER N 8 ? ? -117.27 71.98 15 11 SER O 8 ? ? -116.92 71.04 16 11 SER P 8 ? ? -117.54 73.09 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2M5N _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2M5N _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.contents '15 mg/mL [U-100% 13C; U-100% 15N] TTR(105-115), 10% acetonitrile/water solution' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '10% acetonitrile/water solution' # _pdbx_nmr_exptl_sample.component 'TTR(105-115)-1' _pdbx_nmr_exptl_sample.concentration 15 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mg/mL _pdbx_nmr_exptl_sample.isotopic_labeling '[U-100% 13C; U-100% 15N]' _pdbx_nmr_exptl_sample.solution_id 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 2 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature . _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '1D DQ-DRAWS' 1 2 1 REDOR 1 3 1 ZF-TEDOR 1 4 1 '2D PDSD' # _pdbx_nmr_refine.entry_id 2M5N _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Brunger, Adams, Clore, Gros, Nilges and Read' 'structure solution' CNSSOLVE ? 1 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNSSOLVE ? 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ILE N N N N 14 ILE CA C N S 15 ILE C C N N 16 ILE O O N N 17 ILE CB C N S 18 ILE CG1 C N N 19 ILE CG2 C N N 20 ILE CD1 C N N 21 ILE OXT O N N 22 ILE H H N N 23 ILE H2 H N N 24 ILE HA H N N 25 ILE HB H N N 26 ILE HG12 H N N 27 ILE HG13 H N N 28 ILE HG21 H N N 29 ILE HG22 H N N 30 ILE HG23 H N N 31 ILE HD11 H N N 32 ILE HD12 H N N 33 ILE HD13 H N N 34 ILE HXT H N N 35 LEU N N N N 36 LEU CA C N S 37 LEU C C N N 38 LEU O O N N 39 LEU CB C N N 40 LEU CG C N N 41 LEU CD1 C N N 42 LEU CD2 C N N 43 LEU OXT O N N 44 LEU H H N N 45 LEU H2 H N N 46 LEU HA H N N 47 LEU HB2 H N N 48 LEU HB3 H N N 49 LEU HG H N N 50 LEU HD11 H N N 51 LEU HD12 H N N 52 LEU HD13 H N N 53 LEU HD21 H N N 54 LEU HD22 H N N 55 LEU HD23 H N N 56 LEU HXT H N N 57 PRO N N N N 58 PRO CA C N S 59 PRO C C N N 60 PRO O O N N 61 PRO CB C N N 62 PRO CG C N N 63 PRO CD C N N 64 PRO OXT O N N 65 PRO H H N N 66 PRO HA H N N 67 PRO HB2 H N N 68 PRO HB3 H N N 69 PRO HG2 H N N 70 PRO HG3 H N N 71 PRO HD2 H N N 72 PRO HD3 H N N 73 PRO HXT H N N 74 SER N N N N 75 SER CA C N S 76 SER C C N N 77 SER O O N N 78 SER CB C N N 79 SER OG O N N 80 SER OXT O N N 81 SER H H N N 82 SER H2 H N N 83 SER HA H N N 84 SER HB2 H N N 85 SER HB3 H N N 86 SER HG H N N 87 SER HXT H N N 88 THR N N N N 89 THR CA C N S 90 THR C C N N 91 THR O O N N 92 THR CB C N R 93 THR OG1 O N N 94 THR CG2 C N N 95 THR OXT O N N 96 THR H H N N 97 THR H2 H N N 98 THR HA H N N 99 THR HB H N N 100 THR HG1 H N N 101 THR HG21 H N N 102 THR HG22 H N N 103 THR HG23 H N N 104 THR HXT H N N 105 TYR N N N N 106 TYR CA C N S 107 TYR C C N N 108 TYR O O N N 109 TYR CB C N N 110 TYR CG C Y N 111 TYR CD1 C Y N 112 TYR CD2 C Y N 113 TYR CE1 C Y N 114 TYR CE2 C Y N 115 TYR CZ C Y N 116 TYR OH O N N 117 TYR OXT O N N 118 TYR H H N N 119 TYR H2 H N N 120 TYR HA H N N 121 TYR HB2 H N N 122 TYR HB3 H N N 123 TYR HD1 H N N 124 TYR HD2 H N N 125 TYR HE1 H N N 126 TYR HE2 H N N 127 TYR HH H N N 128 TYR HXT H N N 129 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ILE N CA sing N N 13 ILE N H sing N N 14 ILE N H2 sing N N 15 ILE CA C sing N N 16 ILE CA CB sing N N 17 ILE CA HA sing N N 18 ILE C O doub N N 19 ILE C OXT sing N N 20 ILE CB CG1 sing N N 21 ILE CB CG2 sing N N 22 ILE CB HB sing N N 23 ILE CG1 CD1 sing N N 24 ILE CG1 HG12 sing N N 25 ILE CG1 HG13 sing N N 26 ILE CG2 HG21 sing N N 27 ILE CG2 HG22 sing N N 28 ILE CG2 HG23 sing N N 29 ILE CD1 HD11 sing N N 30 ILE CD1 HD12 sing N N 31 ILE CD1 HD13 sing N N 32 ILE OXT HXT sing N N 33 LEU N CA sing N N 34 LEU N H sing N N 35 LEU N H2 sing N N 36 LEU CA C sing N N 37 LEU CA CB sing N N 38 LEU CA HA sing N N 39 LEU C O doub N N 40 LEU C OXT sing N N 41 LEU CB CG sing N N 42 LEU CB HB2 sing N N 43 LEU CB HB3 sing N N 44 LEU CG CD1 sing N N 45 LEU CG CD2 sing N N 46 LEU CG HG sing N N 47 LEU CD1 HD11 sing N N 48 LEU CD1 HD12 sing N N 49 LEU CD1 HD13 sing N N 50 LEU CD2 HD21 sing N N 51 LEU CD2 HD22 sing N N 52 LEU CD2 HD23 sing N N 53 LEU OXT HXT sing N N 54 PRO N CA sing N N 55 PRO N CD sing N N 56 PRO N H sing N N 57 PRO CA C sing N N 58 PRO CA CB sing N N 59 PRO CA HA sing N N 60 PRO C O doub N N 61 PRO C OXT sing N N 62 PRO CB CG sing N N 63 PRO CB HB2 sing N N 64 PRO CB HB3 sing N N 65 PRO CG CD sing N N 66 PRO CG HG2 sing N N 67 PRO CG HG3 sing N N 68 PRO CD HD2 sing N N 69 PRO CD HD3 sing N N 70 PRO OXT HXT sing N N 71 SER N CA sing N N 72 SER N H sing N N 73 SER N H2 sing N N 74 SER CA C sing N N 75 SER CA CB sing N N 76 SER CA HA sing N N 77 SER C O doub N N 78 SER C OXT sing N N 79 SER CB OG sing N N 80 SER CB HB2 sing N N 81 SER CB HB3 sing N N 82 SER OG HG sing N N 83 SER OXT HXT sing N N 84 THR N CA sing N N 85 THR N H sing N N 86 THR N H2 sing N N 87 THR CA C sing N N 88 THR CA CB sing N N 89 THR CA HA sing N N 90 THR C O doub N N 91 THR C OXT sing N N 92 THR CB OG1 sing N N 93 THR CB CG2 sing N N 94 THR CB HB sing N N 95 THR OG1 HG1 sing N N 96 THR CG2 HG21 sing N N 97 THR CG2 HG22 sing N N 98 THR CG2 HG23 sing N N 99 THR OXT HXT sing N N 100 TYR N CA sing N N 101 TYR N H sing N N 102 TYR N H2 sing N N 103 TYR CA C sing N N 104 TYR CA CB sing N N 105 TYR CA HA sing N N 106 TYR C O doub N N 107 TYR C OXT sing N N 108 TYR CB CG sing N N 109 TYR CB HB2 sing N N 110 TYR CB HB3 sing N N 111 TYR CG CD1 doub Y N 112 TYR CG CD2 sing Y N 113 TYR CD1 CE1 sing Y N 114 TYR CD1 HD1 sing N N 115 TYR CD2 CE2 doub Y N 116 TYR CD2 HD2 sing N N 117 TYR CE1 CZ doub Y N 118 TYR CE1 HE1 sing N N 119 TYR CE2 CZ sing Y N 120 TYR CE2 HE2 sing N N 121 TYR CZ OH sing N N 122 TYR OH HH sing N N 123 TYR OXT HXT sing N N 124 # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 900 Bruker . 1 'Bruker N/A' 750 . . 2 'N/A N/A' 500 . . 3 'N/A N/A' # _atom_sites.entry_id 2M5N _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_