HEADER STRUCTURAL PROTEIN 17-APR-13 2M74 TITLE 1H, 13C AND 15N ASSIGNMENTS OF THE FOUR N-TERMINAL DOMAINS OF HUMAN TITLE 2 FIBRILLIN-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBRILLIN-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FUN-EGF3 REGION OF FIBRILLIN-1, UNP RESIDUES 45-178; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FBN, FBN1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PQE-30; SOURCE 10 OTHER_DETAILS: CELLS WERE ALSO TRANSFORMED WITH THE PREP4 PLASMID, SOURCE 11 ENABLING INDUCIBLE EXPRESSION KEYWDS STRUCTURAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR D.A.YADIN,I.B.ROBERTSON,S.A.JENSEN,P.A.HANDFORD,C.REDFIELD REVDAT 3 14-JUN-23 2M74 1 REMARK SEQADV REVDAT 2 20-NOV-13 2M74 1 JRNL REVDAT 1 25-SEP-13 2M74 0 JRNL AUTH D.A.YADIN,I.B.ROBERTSON,J.MCNAUGHT-DAVIS,P.EVANS,D.STODDART, JRNL AUTH 2 P.A.HANDFORD,S.A.JENSEN,C.REDFIELD JRNL TITL STRUCTURE OF THE FIBRILLIN-1 N-TERMINAL DOMAINS SUGGESTS JRNL TITL 2 THAT HEPARAN SULFATE REGULATES THE EARLY STAGES OF JRNL TITL 3 MICROFIBRIL ASSEMBLY. JRNL REF STRUCTURE V. 21 1743 2013 JRNL REFN ISSN 0969-2126 JRNL PMID 24035709 JRNL DOI 10.1016/J.STR.2013.08.004 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE JUNE 2006 SUN SOLARIS, X-PLOR NIH 2.29, X REMARK 3 -PLOR REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), SCHWIETERS, KUSZEWSKI, TJANDRA AND REMARK 3 CLORE (X-PLOR NIH), BRUNGER (X-PLOR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: AN ENSEMBLE OF 100 STRUCTURES WAS REMARK 3 GENERATED. FLOATING CHIRALITY OF PROCHIRAL GROUPS WAS USED FOR REMARK 3 STEREOSPECIFIC ASSIGNMENT., AN INITIAL ENSEMBLE OF 200 REMARK 3 STRUCTURES WAS USING SIMULATED ANNEALING FROM AN EXTENDED REMARK 3 TEMPLATE USING NOE-DERIVED DISTANCE RESTRAINTS WITH REMARK 3 STEREOSPECIFIC ASSIGNMENTS. COORDINATES OF THE 10 LOWEST-ENERGY REMARK 3 STRUCTURES WERE THEN USED AS TEMPLATES FOR REFINEMENT REMARK 3 CALCULATIONS, INCLUDING THE 'RAMA' AND 'HBDB' DATABASE REMARK 3 POTENTIALS. THE RESULTING 10 LOWEST-ENERGY STRUCTURES WERE THEN REMARK 3 REFINED FURTHER USING RDCS. SEPARATE ALIGNMENT TENSORS WERE USED REMARK 3 FOR THE TWO HALVES OF THE MOLECULE ('NE1' AND 'E2E3'). ALIGNMENT REMARK 3 TENSOR PARAMETERS WERE ESTIMATED USING PARTIALLY REFINED REMARK 3 STRUCTURES. THE 20 LOWEST-STRUCTURES FROM THE FINAL ENSEMBLE OF REMARK 3 200 STRUCTURES WERE SELECTED AS THE REPRESENTATIVE STRUCTURE REMARK 3 ENSEMBLE. REMARK 4 REMARK 4 2M74 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-APR-13. REMARK 100 THE DEPOSITION ID IS D_1000103292. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298; 308 REMARK 210 PH : 5.40; 5.40 REMARK 210 IONIC STRENGTH : 0; 0 REMARK 210 PRESSURE : 1 ATM; 1 ATM REMARK 210 SAMPLE CONTENTS : 1.5 MM [U-99% 15N] FUN-EGF3, 95% REMARK 210 H2O/5% D2O; 0.5 MM [U-99% 15N] REMARK 210 FUN-EGF3, 100% D2O; 1.5 MM [U-99% REMARK 210 13C; U-99% 15N] FUN-EGF3, 95% REMARK 210 H2O/5% D2O; 1.5 MM [U-99% 13C; U- REMARK 210 99% 15N] FUN-EGF3, 100% D2O; 0.5 REMARK 210 MM [U-99% 13C; U-99% 15N] FUN- REMARK 210 EGF3, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-15N NOESY; REMARK 210 3D 1H-15N TOCSY; 2D 1H-1H TOCSY; REMARK 210 2D DQF-COSY; 2D 1H-1H NOESY; 3D REMARK 210 HNCA; 3D (H)CC(CO)NH; 3D HNCO; REMARK 210 3D HN(CA)CO; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 3D HCCH-TOCSY; 3D 1H- REMARK 210 13C NOESY ALIPHATIC; 2D 1H-13C REMARK 210 HSQC AROMATIC; 3D 1H-15N HSQC- REMARK 210 NOESY-HSQC; 2D 1H-15N HMQC-J; 2D REMARK 210 1H-15N IPAP-HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ; 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : HOME-BUILT USING GE OMEGA REMARK 210 SOFTWARE; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : HOME-BUILT; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CCPN_ANALYSIS 2.1.5, X-PLOR 3.8, REMARK 210 X-PLOR NIH 2.29, TALOS+ 3.3, REMARK 210 FELIX 2.3 REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 57 65.79 -119.88 REMARK 500 1 CYS A 68 169.00 -47.10 REMARK 500 1 LYS A 72 -164.52 -121.98 REMARK 500 1 PRO A 75 107.76 -40.44 REMARK 500 1 CYS A 80 55.26 -95.66 REMARK 500 1 GLN A 117 118.47 -171.80 REMARK 500 1 HIS A 118 -106.01 49.39 REMARK 500 1 ASN A 156 -147.62 -170.66 REMARK 500 1 CYS A 177 -104.93 -111.61 REMARK 500 2 PRO A 75 105.47 -39.04 REMARK 500 2 HIS A 87 -118.08 -123.33 REMARK 500 2 CYS A 111 20.31 -76.25 REMARK 500 2 ASP A 131 -118.32 39.88 REMARK 500 2 CYS A 145 140.65 71.14 REMARK 500 2 CYS A 177 119.62 58.75 REMARK 500 3 ALA A 44 56.63 -103.05 REMARK 500 3 ARG A 45 85.31 41.54 REMARK 500 3 ALA A 52 -167.78 179.20 REMARK 500 3 ASN A 57 74.42 -112.54 REMARK 500 3 ASN A 78 16.77 -146.90 REMARK 500 3 CYS A 80 39.23 -88.43 REMARK 500 3 GLN A 117 41.71 -142.18 REMARK 500 3 ASN A 164 23.02 47.90 REMARK 500 3 CYS A 177 11.55 50.19 REMARK 500 4 ALA A 52 155.94 56.70 REMARK 500 4 SER A 115 93.17 38.31 REMARK 500 4 ASN A 156 -58.92 161.67 REMARK 500 4 CYS A 177 124.50 59.56 REMARK 500 5 ARG A 45 81.12 50.87 REMARK 500 5 PRO A 56 -167.46 -68.52 REMARK 500 5 CYS A 80 43.49 -99.21 REMARK 500 5 SER A 113 132.91 58.09 REMARK 500 5 ASP A 131 -97.15 36.11 REMARK 500 5 GLN A 137 -174.77 -68.19 REMARK 500 5 ASN A 156 -60.79 178.23 REMARK 500 5 GLN A 176 47.90 -92.15 REMARK 500 5 CYS A 177 -89.27 57.88 REMARK 500 6 PRO A 56 -169.36 -73.47 REMARK 500 6 CYS A 68 162.52 -45.62 REMARK 500 6 LYS A 72 -157.99 -125.70 REMARK 500 6 PRO A 75 105.98 -40.66 REMARK 500 6 CYS A 80 47.66 -90.96 REMARK 500 6 GLN A 117 90.32 -171.80 REMARK 500 6 HIS A 118 -162.80 42.31 REMARK 500 6 ASN A 120 29.59 -161.75 REMARK 500 6 ASP A 132 -40.68 78.29 REMARK 500 6 GLN A 137 176.13 -59.95 REMARK 500 6 CYS A 145 139.13 60.68 REMARK 500 6 CYS A 177 159.80 57.17 REMARK 500 7 ALA A 52 138.58 -178.29 REMARK 500 REMARK 500 THIS ENTRY HAS 169 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18843 RELATED DB: BMRB REMARK 900 CHEMICAL SHIFT ASSIGNMENTS FOR THE FUN-EGF3 RECOMBINANT FRAGMENT OF REMARK 900 HUMAN FIBRILLIN-1 DBREF 2M74 A 45 178 UNP P35555 FBN1_HUMAN 45 178 SEQADV 2M74 SER A 43 UNP P35555 EXPRESSION TAG SEQADV 2M74 ALA A 44 UNP P35555 EXPRESSION TAG SEQRES 1 A 136 SER ALA ARG GLY GLY GLY GLY HIS ASP ALA LEU LYS GLY SEQRES 2 A 136 PRO ASN VAL CYS GLY SER ARG TYR ASN ALA TYR CYS CYS SEQRES 3 A 136 PRO GLY TRP LYS THR LEU PRO GLY GLY ASN GLN CYS ILE SEQRES 4 A 136 VAL PRO ILE CYS ARG HIS SER CYS GLY ASP GLY PHE CYS SEQRES 5 A 136 SER ARG PRO ASN MET CYS THR CYS PRO SER GLY GLN ILE SEQRES 6 A 136 ALA PRO SER CYS GLY SER ARG SER ILE GLN HIS CYS ASN SEQRES 7 A 136 ILE ARG CYS MET ASN GLY GLY SER CYS SER ASP ASP HIS SEQRES 8 A 136 CYS LEU CYS GLN LYS GLY TYR ILE GLY THR HIS CYS GLY SEQRES 9 A 136 GLN PRO VAL CYS GLU SER GLY CYS LEU ASN GLY GLY ARG SEQRES 10 A 136 CYS VAL ALA PRO ASN ARG CYS ALA CYS THR TYR GLY PHE SEQRES 11 A 136 THR GLY PRO GLN CYS GLU SHEET 1 A 2 VAL A 58 CYS A 59 0 SHEET 2 A 2 TYR A 66 CYS A 67 -1 O TYR A 66 N CYS A 59 SHEET 1 B 2 TRP A 71 LYS A 72 0 SHEET 2 B 2 VAL A 82 PRO A 83 -1 O VAL A 82 N LYS A 72 SHEET 1 C 3 PHE A 93 ARG A 96 0 SHEET 2 C 3 MET A 99 THR A 101 -1 O THR A 101 N PHE A 93 SHEET 3 C 3 ILE A 107 ALA A 108 -1 O ALA A 108 N CYS A 100 SHEET 1 D 2 SER A 128 CYS A 129 0 SHEET 2 D 2 CYS A 134 LEU A 135 -1 O LEU A 135 N SER A 128 SHEET 1 E 2 TYR A 140 ILE A 141 0 SHEET 2 E 2 GLN A 147 PRO A 148 -1 O GLN A 147 N ILE A 141 SHEET 1 F 2 ARG A 159 ALA A 162 0 SHEET 2 F 2 ARG A 165 ALA A 167 -1 O ALA A 167 N ARG A 159 SSBOND 1 CYS A 59 CYS A 68 1555 1555 2.02 SSBOND 2 CYS A 67 CYS A 80 1555 1555 2.02 SSBOND 3 CYS A 85 CYS A 94 1555 1555 2.02 SSBOND 4 CYS A 89 CYS A 100 1555 1555 2.02 SSBOND 5 CYS A 102 CYS A 111 1555 1555 2.01 SSBOND 6 CYS A 119 CYS A 129 1555 1555 2.02 SSBOND 7 CYS A 123 CYS A 134 1555 1555 2.02 SSBOND 8 CYS A 136 CYS A 145 1555 1555 2.02 SSBOND 9 CYS A 150 CYS A 160 1555 1555 2.02 SSBOND 10 CYS A 154 CYS A 166 1555 1555 2.02 SSBOND 11 CYS A 168 CYS A 177 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1