HEADER HYDROLASE 03-MAY-13 2M83 TITLE SOLUTION STRUCTURE OF THE CARBOHYDRATE BINDING MODULE OF THE MUSCLE TITLE 2 GLYCOGEN-TARGETING SUBUNIT OF PROTEIN PHOSPHATASE-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 3A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN PHOSPHATASE 1 GLYCOGEN-ASSOCIATED REGULATORY COMPND 5 SUBUNIT, PROTEIN PHOSPHATASE TYPE-1 GLYCOGEN TARGETING SUBUNIT, RG1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: EUROPEAN RABBIT,JAPANESE WHITE RABBIT,DOMESTIC SOURCE 4 RABBIT,RABBITS; SOURCE 5 ORGANISM_TAXID: 9986; SOURCE 6 GENE: PPP1R3A, PP1G; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PRP1B KEYWDS PROTEIN, STARCH BINDING DOMAIN, CARBOHYDRATE BINDING MODULE, KEYWDS 2 HYDROLASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR D.KOVEAL,R.PAGE,W.PETI REVDAT 3 15-MAY-24 2M83 1 REMARK REVDAT 2 14-JUN-23 2M83 1 REMARK SEQADV REVDAT 1 14-MAY-14 2M83 0 JRNL AUTH D.KOVEAL,M.CHOY,R.PAGE,W.PETI JRNL TITL MOLECULAR BASIS FOR PROTEIN PHOSPHATASE-1 REGULATION BY THE JRNL TITL 2 MUSCLE GLYCOGEN-TARGETING SUBUNIT GM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER A. T. ET.AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RECOORD SCRIPTS WERE USED (NEDERVEEN ET REMARK 3 AL. PROTEINS. 2005.) REMARK 4 REMARK 4 2M83 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000103327. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 70 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.8 MM [U-99% 15N] GM CBM21, 20 REMARK 210 MM SODIUM PHOSPHATE, 50 MM REMARK 210 SODIUM CHLORIDE, 10 MM DTT, 90% REMARK 210 H2O/10% D2O; 0.8 MM [U-99% 13C; REMARK 210 U-99% 15N] GM CBM21, 20 MM REMARK 210 SODIUM PHOSPHATE, 50 MM SODIUM REMARK 210 CHLORIDE, 10 MM DTT, 90% H2O/10% REMARK 210 D2O; 0.8 MM GM CBM21, 20 MM REMARK 210 SODIUM PHOSPHATE, 50 MM SODIUM REMARK 210 CHLORIDE, 10 MM DTT, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D (H)CC(CO)NH; 3D REMARK 210 HBHA(CO)NH; 3D HCCH-TOCSY; 2D 1H- REMARK 210 1H NOESY; 2D 1H-1H TOCSY; 2D 1H- REMARK 210 1H COSY; 3D 1H-15N NOESY; 3D 1H- REMARK 210 13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CARA, TOPSPIN, CYANA_2.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD1 HIS A 171 OD1 ASP A 173 1.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 10 PRO A 198 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 18 PRO A 198 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 100 84.56 67.98 REMARK 500 1 GLU A 105 -177.04 -172.00 REMARK 500 1 TYR A 106 106.02 -55.69 REMARK 500 1 PRO A 115 103.97 -54.67 REMARK 500 1 VAL A 127 -61.84 -105.80 REMARK 500 1 GLN A 128 51.69 -108.76 REMARK 500 1 LYS A 129 -36.84 -19.60 REMARK 500 1 TRP A 168 54.35 89.87 REMARK 500 1 ASP A 173 89.30 39.35 REMARK 500 1 PRO A 198 -50.53 -28.05 REMARK 500 1 LYS A 206 154.01 82.32 REMARK 500 1 VAL A 207 112.27 -175.23 REMARK 500 1 ASN A 224 -160.85 -128.90 REMARK 500 1 ASN A 225 3.11 -65.19 REMARK 500 1 ASN A 228 -78.72 -76.46 REMARK 500 1 CYS A 233 85.86 -57.79 REMARK 500 2 MET A 101 88.28 58.48 REMARK 500 2 THR A 103 -162.73 57.32 REMARK 500 2 VAL A 127 -70.45 -110.56 REMARK 500 2 GLN A 128 51.24 -98.67 REMARK 500 2 LYS A 129 -39.15 -19.90 REMARK 500 2 PRO A 139 99.82 -59.67 REMARK 500 2 ASP A 166 -154.39 -171.49 REMARK 500 2 TRP A 168 53.22 90.87 REMARK 500 2 HIS A 171 116.27 -165.16 REMARK 500 2 ASP A 173 87.71 44.88 REMARK 500 2 ASP A 184 44.74 -148.49 REMARK 500 2 PRO A 198 -49.61 -26.66 REMARK 500 2 GLN A 201 99.13 -162.00 REMARK 500 2 ASP A 203 -66.15 -120.28 REMARK 500 2 LYS A 206 73.87 62.60 REMARK 500 2 ASN A 225 78.54 60.90 REMARK 500 2 ASN A 228 -75.41 -82.67 REMARK 500 2 TYR A 229 91.29 -171.02 REMARK 500 2 CYS A 233 87.89 -45.94 REMARK 500 3 MET A 101 107.39 179.57 REMARK 500 3 GLN A 102 100.49 70.93 REMARK 500 3 GLU A 105 -163.04 -116.12 REMARK 500 3 TYR A 106 105.10 -59.44 REMARK 500 3 VAL A 127 -66.05 -101.58 REMARK 500 3 GLN A 128 54.05 -105.40 REMARK 500 3 LYS A 129 -36.54 -18.71 REMARK 500 3 PRO A 139 107.09 -59.81 REMARK 500 3 THR A 142 53.63 -99.20 REMARK 500 3 ASP A 167 3.53 -69.83 REMARK 500 3 TRP A 168 23.83 87.04 REMARK 500 3 ASP A 173 86.82 37.79 REMARK 500 3 ASP A 184 60.67 -111.74 REMARK 500 3 SER A 195 -173.86 -63.19 REMARK 500 3 PRO A 198 -50.29 -29.31 REMARK 500 REMARK 500 THIS ENTRY HAS 311 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 4 ARG A 162 0.07 SIDE CHAIN REMARK 500 7 ARG A 212 0.10 SIDE CHAIN REMARK 500 11 ARG A 212 0.10 SIDE CHAIN REMARK 500 12 ARG A 212 0.10 SIDE CHAIN REMARK 500 13 ARG A 162 0.10 SIDE CHAIN REMARK 500 14 ARG A 149 0.08 SIDE CHAIN REMARK 500 15 ARG A 162 0.10 SIDE CHAIN REMARK 500 16 ARG A 212 0.08 SIDE CHAIN REMARK 500 19 ARG A 162 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19225 RELATED DB: BMRB DBREF 2M83 A 102 237 UNP Q00756 PPR3A_RABIT 102 237 SEQADV 2M83 GLY A 99 UNP Q00756 EXPRESSION TAG SEQADV 2M83 HIS A 100 UNP Q00756 EXPRESSION TAG SEQADV 2M83 MET A 101 UNP Q00756 EXPRESSION TAG SEQRES 1 A 139 GLY HIS MET GLN THR GLU GLU TYR VAL LEU SER PRO LEU SEQRES 2 A 139 PHE ASP LEU PRO ALA SER LYS GLU ASP LEU MET GLN GLN SEQRES 3 A 139 LEU GLN VAL GLN LYS ALA MET LEU GLU SER THR GLU TYR SEQRES 4 A 139 VAL PRO GLY SER THR SER MET LYS GLY ILE ILE ARG VAL SEQRES 5 A 139 LEU ASN ILE SER PHE GLU LYS LEU VAL TYR VAL ARG MET SEQRES 6 A 139 SER LEU ASP ASP TRP GLN THR HIS TYR ASP ILE LEU ALA SEQRES 7 A 139 GLU TYR VAL PRO ASN SER CYS ASP GLY GLU THR ASP GLN SEQRES 8 A 139 PHE SER PHE LYS ILE SER LEU VAL PRO PRO TYR GLN LYS SEQRES 9 A 139 ASP GLY SER LYS VAL GLU PHE CYS ILE ARG TYR GLU THR SEQRES 10 A 139 SER VAL GLY THR PHE TRP SER ASN ASN ASN GLY THR ASN SEQRES 11 A 139 TYR THR LEU VAL CYS GLN LYS LYS GLU HELIX 1 1 SER A 117 GLN A 126 1 10 SHEET 1 A 2 LEU A 108 PRO A 110 0 SHEET 2 A 2 LEU A 231 LYS A 235 -1 O VAL A 232 N SER A 109 SHEET 1 B 4 ALA A 130 TYR A 137 0 SHEET 2 B 4 MET A 144 LEU A 151 -1 O ILE A 147 N GLU A 133 SHEET 3 B 4 THR A 187 LYS A 193 -1 O PHE A 190 N ILE A 148 SHEET 4 B 4 GLU A 177 TYR A 178 -1 N GLU A 177 O SER A 191 SHEET 1 C 4 ILE A 174 LEU A 175 0 SHEET 2 C 4 LYS A 157 SER A 164 -1 N VAL A 161 O ILE A 174 SHEET 3 C 4 GLU A 208 THR A 215 -1 O ARG A 212 N TYR A 160 SHEET 4 C 4 GLY A 218 SER A 222 -1 O PHE A 220 N TYR A 213 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1