HEADER UNKNOWN FUNCTION 17-JUL-13 2MAR TITLE SOLUTION STRUCTURE OF ANI S 5 ANISAKIS SIMPLEX ALLERGEN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SXP/RAL-2 FAMILY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 19-152; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANISAKIS SIMPLEX; SOURCE 3 ORGANISM_COMMON: HERRING WORM; SOURCE 4 ORGANISM_TAXID: 6269; SOURCE 5 GENE: ANI S 5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET46 EK/LIC KEYWDS UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.F.GARCIA-MAYORAL,M.A.TREVINO,T.PEREZ-PINAR,M.L.CABALLERO,T.KNAUTE, AUTHOR 2 A.UMPIERREZ,M.BRUIX,R.RODRIGUEZ-PEREZ REVDAT 2 14-JUN-23 2MAR 1 REMARK REVDAT 1 02-JUL-14 2MAR 0 JRNL AUTH M.F.GARCIA-MAYORAL,M.A.TREVINO,T.PEREZ-PINAR,M.L.CABALLERO, JRNL AUTH 2 T.KNAUTE,A.UMPIERREZ,M.BRUIX,R.RODRIGUEZ-PEREZ JRNL TITL RELATIONSHIPS BETWEEN IGE/IGG4 EPITOPES, STRUCTURE AND JRNL TITL 2 FUNCTION IN ANISAKIS SIMPLEX ANI S 5, A MEMBER OF THE JRNL TITL 3 SXP/RAL-2 PROTEIN FAMILY JRNL REF PLOS NEGL TROP DIS V. 8 E2735 2014 JRNL REFN ISSN 1935-2727 JRNL PMID 24603892 JRNL DOI 10.1371/JOURNAL.PNTD.0002735 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, AMBER 9, CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), CASE, REMARK 3 DARDEN, CHEATHAM, III, SIMMERLING, WANG, DUKE, LUO, REMARK 3 ... AND KOLLMAN (AMBER) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MAR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000103420. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 3.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-13C; U-15N] ANI S 5-1, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCO; 3D HNCA; 3D HN(CO)CA; REMARK 210 3D CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 HCCH-TOCSY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D 1H-15N NOESY; 3D 1H- REMARK 210 15N TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, ENERGY REMARK 210 MINIMIZATION REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 10 41.87 -95.86 REMARK 500 1 LEU A 116 75.89 -109.36 REMARK 500 2 ASP A 2 -65.69 -153.03 REMARK 500 2 ALA A 11 105.59 -35.36 REMARK 500 2 ASP A 50 -3.12 71.20 REMARK 500 2 ASP A 97 78.40 -156.63 REMARK 500 2 ILE A 128 54.10 -148.74 REMARK 500 2 ALA A 131 108.14 59.80 REMARK 500 2 VAL A 132 72.83 -116.23 REMARK 500 3 MET A 80 -84.68 -90.24 REMARK 500 3 ASP A 97 79.88 -157.83 REMARK 500 3 LEU A 116 72.31 -109.15 REMARK 500 4 ALA A 11 101.50 -34.49 REMARK 500 4 LEU A 116 151.16 -44.75 REMARK 500 5 LEU A 10 35.44 -93.40 REMARK 500 5 MET A 80 -160.30 -102.30 REMARK 500 6 LEU A 10 38.77 -91.56 REMARK 500 6 MET A 80 -159.27 -103.25 REMARK 500 6 LEU A 116 74.86 -108.04 REMARK 500 6 ILE A 128 64.93 -118.98 REMARK 500 7 ASP A 50 -1.94 69.70 REMARK 500 7 ILE A 128 60.40 29.37 REMARK 500 7 ALA A 131 116.24 -161.94 REMARK 500 8 ALA A 11 104.52 -35.36 REMARK 500 8 MET A 80 -163.55 -106.31 REMARK 500 8 ILE A 128 49.21 -143.22 REMARK 500 9 ASP A 2 55.47 -158.69 REMARK 500 9 LEU A 47 -71.21 -66.25 REMARK 500 9 MET A 80 -83.86 -86.56 REMARK 500 9 LEU A 116 71.29 -114.69 REMARK 500 9 ALA A 131 107.47 57.28 REMARK 500 9 VAL A 132 79.30 -107.22 REMARK 500 10 ALA A 11 99.12 -15.48 REMARK 500 10 LYS A 31 171.95 -56.09 REMARK 500 10 MET A 80 -77.02 -97.43 REMARK 500 10 THR A 115 44.22 -98.93 REMARK 500 10 ILE A 128 54.93 -151.16 REMARK 500 10 PRO A 133 -169.26 -73.06 REMARK 500 11 ALA A 11 107.62 -40.32 REMARK 500 11 MET A 80 -80.55 -93.44 REMARK 500 11 ILE A 128 63.40 -117.16 REMARK 500 11 ALA A 131 100.78 57.29 REMARK 500 11 VAL A 132 74.59 -119.20 REMARK 500 12 MET A 80 -85.73 -88.23 REMARK 500 12 ILE A 128 56.82 -140.26 REMARK 500 12 ALA A 131 97.13 57.92 REMARK 500 13 ASP A 2 -74.92 -148.83 REMARK 500 13 ALA A 11 104.19 -37.60 REMARK 500 13 MET A 80 -159.02 -103.88 REMARK 500 13 LEU A 116 72.05 -111.71 REMARK 500 REMARK 500 THIS ENTRY HAS 71 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 16 ALA A 111 -10.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19372 RELATED DB: BMRB DBREF 2MAR A 1 134 UNP A1IKL2 A1IKL2_ANISI 19 152 SEQRES 1 A 134 ASP ASP THR PRO PRO PRO PRO PRO PHE LEU ALA GLY ALA SEQRES 2 A 134 PRO GLN ASP VAL VAL LYS ALA PHE PHE GLU LEU LEU LYS SEQRES 3 A 134 LYS ASP GLU THR LYS THR ASP PRO GLU ILE GLU LYS ASP SEQRES 4 A 134 LEU ASP ALA TRP VAL ASP THR LEU GLY GLY ASP TYR LYS SEQRES 5 A 134 ALA LYS PHE GLU THR PHE LYS LYS GLU MET LYS ALA LYS SEQRES 6 A 134 GLU ALA GLU LEU ALA LYS ALA HIS GLU GLU ALA VAL ALA SEQRES 7 A 134 LYS MET THR PRO GLU ALA LYS LYS ALA ASP ALA GLU LEU SEQRES 8 A 134 SER LYS ILE ALA GLU ASP ASP SER LEU ASN GLY ILE GLN SEQRES 9 A 134 LYS ALA GLN LYS ILE GLN ALA ILE TYR LYS THR LEU PRO SEQRES 10 A 134 GLN SER VAL LYS ASP GLU LEU GLU LYS GLY ILE GLY PRO SEQRES 11 A 134 ALA VAL PRO GLN HELIX 1 1 PRO A 14 ASP A 28 1 15 HELIX 2 2 THR A 32 ASP A 45 1 14 HELIX 3 3 ASP A 50 ALA A 78 1 29 HELIX 4 4 THR A 81 ASP A 97 1 17 HELIX 5 5 GLY A 102 LYS A 114 1 13 HELIX 6 6 PRO A 117 LYS A 126 1 10 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1