data_2MD5 # _entry.id 2MD5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2MD5 pdb_00002md5 10.2210/pdb2md5/pdb RCSB RCSB103495 ? ? BMRB 19474 ? ? WWPDB D_1000103495 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 2LF8 PDB . unspecified 2LF7 PDB . unspecified 19474 BMRB . unspecified 4MHG PDB . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MD5 _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-08-29 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'De, S.' 1 'Mcintosh, L.P.' 2 'Chan, A.C.' 3 'Coyne, H.J.' 4 'Okon, M.' 5 'Graves, B.J.' 6 'Murphy, M.E.' 7 # _citation.id primary _citation.title 'Steric Mechanism of Auto-Inhibitory Regulation of Specific and Non-Specific DNA Binding by the ETS Transcriptional Repressor ETV6.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 426 _citation.page_first 1390 _citation.page_last 1406 _citation.year 2014 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24333486 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2013.11.031 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'De, S.' 1 ? primary 'Chan, A.C.' 2 ? primary 'Coyne, H.J.' 3 ? primary 'Bhachech, N.' 4 ? primary 'Hermsdorf, U.' 5 ? primary 'Okon, M.' 6 ? primary 'Murphy, M.E.' 7 ? primary 'Graves, B.J.' 8 ? primary 'McIntosh, L.P.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Transcription factor ETV6' _entity.formula_weight 12450.353 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation C334S _entity.pdbx_fragment 'unp residues 329-426' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ETS translocation variant 6, ETS-related protein Tel1, Tel' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMGRIADSRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHYYKLNIIR KEPGQRLLFRFMKTPDEIMSGR ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMGRIADSRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHYYKLNIIR KEPGQRLLFRFMKTPDEIMSGR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLY n 1 6 ARG n 1 7 ILE n 1 8 ALA n 1 9 ASP n 1 10 SER n 1 11 ARG n 1 12 LEU n 1 13 LEU n 1 14 TRP n 1 15 ASP n 1 16 TYR n 1 17 VAL n 1 18 TYR n 1 19 GLN n 1 20 LEU n 1 21 LEU n 1 22 SER n 1 23 ASP n 1 24 SER n 1 25 ARG n 1 26 TYR n 1 27 GLU n 1 28 ASN n 1 29 PHE n 1 30 ILE n 1 31 ARG n 1 32 TRP n 1 33 GLU n 1 34 ASP n 1 35 LYS n 1 36 GLU n 1 37 SER n 1 38 LYS n 1 39 ILE n 1 40 PHE n 1 41 ARG n 1 42 ILE n 1 43 VAL n 1 44 ASP n 1 45 PRO n 1 46 ASN n 1 47 GLY n 1 48 LEU n 1 49 ALA n 1 50 ARG n 1 51 LEU n 1 52 TRP n 1 53 GLY n 1 54 ASN n 1 55 HIS n 1 56 LYS n 1 57 ASN n 1 58 ARG n 1 59 THR n 1 60 ASN n 1 61 MET n 1 62 THR n 1 63 TYR n 1 64 GLU n 1 65 LYS n 1 66 MET n 1 67 SER n 1 68 ARG n 1 69 ALA n 1 70 LEU n 1 71 ARG n 1 72 HIS n 1 73 TYR n 1 74 TYR n 1 75 LYS n 1 76 LEU n 1 77 ASN n 1 78 ILE n 1 79 ILE n 1 80 ARG n 1 81 LYS n 1 82 GLU n 1 83 PRO n 1 84 GLY n 1 85 GLN n 1 86 ARG n 1 87 LEU n 1 88 LEU n 1 89 PHE n 1 90 ARG n 1 91 PHE n 1 92 MET n 1 93 LYS n 1 94 THR n 1 95 PRO n 1 96 ASP n 1 97 GLU n 1 98 ILE n 1 99 MET n 1 100 SER n 1 101 GLY n 1 102 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Etv6, Tel, Tel1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector 'pET 28 a+' _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ETV6_MOUSE _struct_ref.pdbx_db_accession P97360 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GRIADCRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHYYKLNIIRKEPG QRLLFRFMKTPDEIMSGR ; _struct_ref.pdbx_align_begin 329 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2MD5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 102 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P97360 _struct_ref_seq.db_align_beg 329 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 426 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 329 _struct_ref_seq.pdbx_auth_seq_align_end 426 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2MD5 GLY A 1 ? UNP P97360 ? ? 'expression tag' 325 1 1 2MD5 SER A 2 ? UNP P97360 ? ? 'expression tag' 326 2 1 2MD5 HIS A 3 ? UNP P97360 ? ? 'expression tag' 327 3 1 2MD5 MET A 4 ? UNP P97360 ? ? 'expression tag' 328 4 1 2MD5 SER A 10 ? UNP P97360 CYS 334 'engineered mutation' 334 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-13C HSQC aliphatic' 1 3 1 '2D 1H-13C HSQC aromatic' 1 4 1 '3D H(CCO)NH' 1 5 1 '3D (H)CC(CO)NH' 1 6 1 '3D HCCH-TOCSY' 1 7 1 '3D HNCACB' 1 8 1 '3D 1H-15N NOESY' 1 9 1 '2D 1H-13C HSQC aliphatic' 1 10 1 '2D 1H-13C HSQC aromatic' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.11 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '0.6 mM [U-99% 13C; U-99% 15N] protein, 0.02 mM sodium phosphate, 0.05 mM sodium chloride, 93% H2O/7% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '93% H2O/7% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 850 Bruker AVANCE 1 'Bruker Avance' 600 Bruker AVANCE 2 'Bruker Avance' 500 Bruker AVANCE 3 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2MD5 _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MD5 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MD5 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Bruker Biospin' collection TopSpin ? 1 Goddard 'chemical shift assignment' Sparky ? 2 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 3 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA ? 4 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS ? 5 'Brunger, Adams, Clore, Gros, Nilges and Read' 'geometry optimization' CNS ? 6 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2MD5 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2MD5 _struct.title 'Structure of uninhibited ETV6 ETS domain' _struct.pdbx_model_details 'closest to the average, model6' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MD5 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'Protein, Auto-inhibition, Transcription' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 12 ? ASP A 23 ? LEU A 336 ASP A 347 1 ? 12 HELX_P HELX_P2 2 ASP A 44 ? LYS A 56 ? ASP A 368 LYS A 380 1 ? 13 HELX_P HELX_P3 3 THR A 62 ? LEU A 76 ? THR A 386 LEU A 400 1 ? 15 HELX_P HELX_P4 4 PRO A 95 ? SER A 100 ? PRO A 419 SER A 424 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 30 ? ASP A 34 ? ILE A 354 ASP A 358 A 2 ILE A 39 ? ILE A 42 ? ILE A 363 ILE A 366 A 3 LEU A 88 ? PHE A 91 ? LEU A 412 PHE A 415 A 4 ILE A 79 ? LYS A 81 ? ILE A 403 LYS A 405 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASP A 34 ? N ASP A 358 O ILE A 39 ? O ILE A 363 A 2 3 N PHE A 40 ? N PHE A 364 O PHE A 89 ? O PHE A 413 A 3 4 O ARG A 90 ? O ARG A 414 N ARG A 80 ? N ARG A 404 # _atom_sites.entry_id 2MD5 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 325 325 GLY GLY A . n A 1 2 SER 2 326 326 SER SER A . n A 1 3 HIS 3 327 327 HIS HIS A . n A 1 4 MET 4 328 328 MET MET A . n A 1 5 GLY 5 329 329 GLY GLY A . n A 1 6 ARG 6 330 330 ARG ARG A . n A 1 7 ILE 7 331 331 ILE ILE A . n A 1 8 ALA 8 332 332 ALA ALA A . n A 1 9 ASP 9 333 333 ASP ASP A . n A 1 10 SER 10 334 334 SER SER A . n A 1 11 ARG 11 335 335 ARG ARG A . n A 1 12 LEU 12 336 336 LEU LEU A . n A 1 13 LEU 13 337 337 LEU LEU A . n A 1 14 TRP 14 338 338 TRP TRP A . n A 1 15 ASP 15 339 339 ASP ASP A . n A 1 16 TYR 16 340 340 TYR TYR A . n A 1 17 VAL 17 341 341 VAL VAL A . n A 1 18 TYR 18 342 342 TYR TYR A . n A 1 19 GLN 19 343 343 GLN GLN A . n A 1 20 LEU 20 344 344 LEU LEU A . n A 1 21 LEU 21 345 345 LEU LEU A . n A 1 22 SER 22 346 346 SER SER A . n A 1 23 ASP 23 347 347 ASP ASP A . n A 1 24 SER 24 348 348 SER SER A . n A 1 25 ARG 25 349 349 ARG ARG A . n A 1 26 TYR 26 350 350 TYR TYR A . n A 1 27 GLU 27 351 351 GLU GLU A . n A 1 28 ASN 28 352 352 ASN ASN A . n A 1 29 PHE 29 353 353 PHE PHE A . n A 1 30 ILE 30 354 354 ILE ILE A . n A 1 31 ARG 31 355 355 ARG ARG A . n A 1 32 TRP 32 356 356 TRP TRP A . n A 1 33 GLU 33 357 357 GLU GLU A . n A 1 34 ASP 34 358 358 ASP ASP A . n A 1 35 LYS 35 359 359 LYS LYS A . n A 1 36 GLU 36 360 360 GLU GLU A . n A 1 37 SER 37 361 361 SER SER A . n A 1 38 LYS 38 362 362 LYS LYS A . n A 1 39 ILE 39 363 363 ILE ILE A . n A 1 40 PHE 40 364 364 PHE PHE A . n A 1 41 ARG 41 365 365 ARG ARG A . n A 1 42 ILE 42 366 366 ILE ILE A . n A 1 43 VAL 43 367 367 VAL VAL A . n A 1 44 ASP 44 368 368 ASP ASP A . n A 1 45 PRO 45 369 369 PRO PRO A . n A 1 46 ASN 46 370 370 ASN ASN A . n A 1 47 GLY 47 371 371 GLY GLY A . n A 1 48 LEU 48 372 372 LEU LEU A . n A 1 49 ALA 49 373 373 ALA ALA A . n A 1 50 ARG 50 374 374 ARG ARG A . n A 1 51 LEU 51 375 375 LEU LEU A . n A 1 52 TRP 52 376 376 TRP TRP A . n A 1 53 GLY 53 377 377 GLY GLY A . n A 1 54 ASN 54 378 378 ASN ASN A . n A 1 55 HIS 55 379 379 HIS HIS A . n A 1 56 LYS 56 380 380 LYS LYS A . n A 1 57 ASN 57 381 381 ASN ASN A . n A 1 58 ARG 58 382 382 ARG ARG A . n A 1 59 THR 59 383 383 THR THR A . n A 1 60 ASN 60 384 384 ASN ASN A . n A 1 61 MET 61 385 385 MET MET A . n A 1 62 THR 62 386 386 THR THR A . n A 1 63 TYR 63 387 387 TYR TYR A . n A 1 64 GLU 64 388 388 GLU GLU A . n A 1 65 LYS 65 389 389 LYS LYS A . n A 1 66 MET 66 390 390 MET MET A . n A 1 67 SER 67 391 391 SER SER A . n A 1 68 ARG 68 392 392 ARG ARG A . n A 1 69 ALA 69 393 393 ALA ALA A . n A 1 70 LEU 70 394 394 LEU LEU A . n A 1 71 ARG 71 395 395 ARG ARG A . n A 1 72 HIS 72 396 396 HIS HIS A . n A 1 73 TYR 73 397 397 TYR TYR A . n A 1 74 TYR 74 398 398 TYR TYR A . n A 1 75 LYS 75 399 399 LYS LYS A . n A 1 76 LEU 76 400 400 LEU LEU A . n A 1 77 ASN 77 401 401 ASN ASN A . n A 1 78 ILE 78 402 402 ILE ILE A . n A 1 79 ILE 79 403 403 ILE ILE A . n A 1 80 ARG 80 404 404 ARG ARG A . n A 1 81 LYS 81 405 405 LYS LYS A . n A 1 82 GLU 82 406 406 GLU GLU A . n A 1 83 PRO 83 407 407 PRO PRO A . n A 1 84 GLY 84 408 408 GLY GLY A . n A 1 85 GLN 85 409 409 GLN GLN A . n A 1 86 ARG 86 410 410 ARG ARG A . n A 1 87 LEU 87 411 411 LEU LEU A . n A 1 88 LEU 88 412 412 LEU LEU A . n A 1 89 PHE 89 413 413 PHE PHE A . n A 1 90 ARG 90 414 414 ARG ARG A . n A 1 91 PHE 91 415 415 PHE PHE A . n A 1 92 MET 92 416 416 MET MET A . n A 1 93 LYS 93 417 417 LYS LYS A . n A 1 94 THR 94 418 418 THR THR A . n A 1 95 PRO 95 419 419 PRO PRO A . n A 1 96 ASP 96 420 420 ASP ASP A . n A 1 97 GLU 97 421 421 GLU GLU A . n A 1 98 ILE 98 422 422 ILE ILE A . n A 1 99 MET 99 423 423 MET MET A . n A 1 100 SER 100 424 424 SER SER A . n A 1 101 GLY 101 425 425 GLY GLY A . n A 1 102 ARG 102 426 426 ARG ARG A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-12-25 2 'Structure model' 1 1 2014-04-02 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' pdbx_nmr_spectrometer 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_pdbx_nmr_software.name' 5 3 'Structure model' '_pdbx_nmr_spectrometer.model' 6 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id entity-1 0.6 ? mM '[U-99% 13C; U-99% 15N]' 1 'sodium phosphate-2' 0.02 ? mM ? 1 'sodium chloride-3' 0.05 ? mM ? 1 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2MD5 _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 1655 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count ? _pdbx_nmr_constraints.NOE_long_range_total_count 472 _pdbx_nmr_constraints.NOE_medium_range_total_count 315 _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count ? _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count 0 _pdbx_nmr_constraints.protein_other_angle_constraints_total_count 0 _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count 85 _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count 88 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HG1 A THR 418 ? ? OD1 A ASP 420 ? ? 1.59 2 2 HG1 A THR 386 ? ? OE1 A GLU 388 ? ? 1.57 3 2 HH12 A ARG 355 ? ? OE1 A GLU 357 ? ? 1.59 4 3 OD2 A ASP 333 ? ? HE2 A HIS 396 ? ? 1.58 5 4 HA A ARG 395 ? ? HD2 A TYR 398 ? ? 1.27 6 4 HG1 A THR 418 ? ? OD2 A ASP 420 ? ? 1.58 7 7 HH12 A ARG 355 ? ? OE1 A GLU 357 ? ? 1.56 8 9 HA A ARG 395 ? ? HD2 A TYR 398 ? ? 1.33 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 347 ? ? -117.39 61.48 2 1 ASN A 352 ? ? 56.78 19.49 3 1 ASN A 384 ? ? 53.55 77.47 4 2 SER A 334 ? ? -149.47 -63.34 5 2 ARG A 335 ? ? -95.05 38.52 6 2 ASN A 352 ? ? 56.93 19.82 7 3 LEU A 336 ? ? -65.94 3.53 8 3 ASN A 384 ? ? 60.41 77.35 9 4 ASN A 384 ? ? 66.63 76.52 10 5 HIS A 327 ? ? -167.58 108.90 11 5 ASP A 333 ? ? 69.76 99.49 12 6 ARG A 330 ? ? -156.42 73.40 13 6 ASP A 347 ? ? -117.34 61.71 14 7 ASP A 347 ? ? -107.21 61.91 15 7 ASN A 352 ? ? 58.02 19.06 16 7 ASN A 384 ? ? 59.40 76.84 17 8 SER A 326 ? ? -97.34 -65.21 18 8 ASP A 358 ? ? -161.97 110.63 19 9 ASP A 347 ? ? -114.05 75.58 20 9 ASN A 384 ? ? 65.64 77.42 21 9 ARG A 410 ? ? -102.99 -60.02 22 10 ASP A 347 ? ? -156.23 84.47 23 10 ASN A 384 ? ? 60.30 76.74 #