HEADER TRANSCRIPTION 29-AUG-13 2MD5 TITLE STRUCTURE OF UNINHIBITED ETV6 ETS DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION FACTOR ETV6; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 329-426; COMPND 5 SYNONYM: ETS TRANSLOCATION VARIANT 6, ETS-RELATED PROTEIN TEL1, TEL; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: ETV6, TEL, TEL1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET 28 A+ KEYWDS PROTEIN, AUTO-INHIBITION, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR S.DE,L.P.MCINTOSH,A.C.CHAN,H.J.COYNE,M.OKON,B.J.GRAVES,M.E.MURPHY REVDAT 3 14-JUN-23 2MD5 1 REMARK SEQADV REVDAT 2 02-APR-14 2MD5 1 JRNL REVDAT 1 25-DEC-13 2MD5 0 JRNL AUTH S.DE,A.C.CHAN,H.J.COYNE,N.BHACHECH,U.HERMSDORF,M.OKON, JRNL AUTH 2 M.E.MURPHY,B.J.GRAVES,L.P.MCINTOSH JRNL TITL STERIC MECHANISM OF AUTO-INHIBITORY REGULATION OF SPECIFIC JRNL TITL 2 AND NON-SPECIFIC DNA BINDING BY THE ETS TRANSCRIPTIONAL JRNL TITL 3 REPRESSOR ETV6. JRNL REF J.MOL.BIOL. V. 426 1390 2014 JRNL REFN ISSN 0022-2836 JRNL PMID 24333486 JRNL DOI 10.1016/J.JMB.2013.11.031 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN, CNS REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), BRUNGER, ADAMS, CLORE, REMARK 3 GROS, NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MD5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000103495. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0.11 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.6 MM [U-99% 13C; U-99% 15N] REMARK 210 PROTEIN, 0.02 MM SODIUM REMARK 210 PHOSPHATE, 0.05 MM SODIUM REMARK 210 CHLORIDE, 93% H2O/7% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D H(CCO)NH; 3D (H) REMARK 210 CC(CO)NH; 3D HCCH-TOCSY; 3D REMARK 210 HNCACB; 3D 1H-15N NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 850 MHZ; 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, NMRPIPE, CYANA, CNS REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG1 THR A 418 OD1 ASP A 420 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 347 61.48 -117.39 REMARK 500 1 ASN A 352 19.49 56.78 REMARK 500 1 ASN A 384 77.47 53.55 REMARK 500 2 SER A 334 -63.34 -149.47 REMARK 500 2 ARG A 335 38.52 -95.05 REMARK 500 2 ASN A 352 19.82 56.93 REMARK 500 3 LEU A 336 3.53 -65.94 REMARK 500 3 ASN A 384 77.35 60.41 REMARK 500 4 ASN A 384 76.52 66.63 REMARK 500 5 HIS A 327 108.90 -167.58 REMARK 500 5 ASP A 333 99.49 69.76 REMARK 500 6 ARG A 330 73.40 -156.42 REMARK 500 6 ASP A 347 61.71 -117.34 REMARK 500 7 ASP A 347 61.91 -107.21 REMARK 500 7 ASN A 352 19.06 58.02 REMARK 500 7 ASN A 384 76.84 59.40 REMARK 500 8 SER A 326 -65.21 -97.34 REMARK 500 8 ASP A 358 110.63 -161.97 REMARK 500 9 ASP A 347 75.58 -114.05 REMARK 500 9 ASN A 384 77.42 65.64 REMARK 500 9 ARG A 410 -60.02 -102.99 REMARK 500 10 ASP A 347 84.47 -156.23 REMARK 500 10 ASN A 384 76.74 60.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2LF8 RELATED DB: PDB REMARK 900 RELATED ID: 2LF7 RELATED DB: PDB REMARK 900 RELATED ID: 19474 RELATED DB: BMRB REMARK 900 RELATED ID: 4MHG RELATED DB: PDB DBREF 2MD5 A 329 426 UNP P97360 ETV6_MOUSE 329 426 SEQADV 2MD5 GLY A 325 UNP P97360 EXPRESSION TAG SEQADV 2MD5 SER A 326 UNP P97360 EXPRESSION TAG SEQADV 2MD5 HIS A 327 UNP P97360 EXPRESSION TAG SEQADV 2MD5 MET A 328 UNP P97360 EXPRESSION TAG SEQADV 2MD5 SER A 334 UNP P97360 CYS 334 ENGINEERED MUTATION SEQRES 1 A 102 GLY SER HIS MET GLY ARG ILE ALA ASP SER ARG LEU LEU SEQRES 2 A 102 TRP ASP TYR VAL TYR GLN LEU LEU SER ASP SER ARG TYR SEQRES 3 A 102 GLU ASN PHE ILE ARG TRP GLU ASP LYS GLU SER LYS ILE SEQRES 4 A 102 PHE ARG ILE VAL ASP PRO ASN GLY LEU ALA ARG LEU TRP SEQRES 5 A 102 GLY ASN HIS LYS ASN ARG THR ASN MET THR TYR GLU LYS SEQRES 6 A 102 MET SER ARG ALA LEU ARG HIS TYR TYR LYS LEU ASN ILE SEQRES 7 A 102 ILE ARG LYS GLU PRO GLY GLN ARG LEU LEU PHE ARG PHE SEQRES 8 A 102 MET LYS THR PRO ASP GLU ILE MET SER GLY ARG HELIX 1 1 LEU A 336 ASP A 347 1 12 HELIX 2 2 ASP A 368 LYS A 380 1 13 HELIX 3 3 THR A 386 LEU A 400 1 15 HELIX 4 4 PRO A 419 SER A 424 1 6 SHEET 1 A 4 ILE A 354 ASP A 358 0 SHEET 2 A 4 ILE A 363 ILE A 366 -1 O ILE A 363 N ASP A 358 SHEET 3 A 4 LEU A 412 PHE A 415 -1 O PHE A 413 N PHE A 364 SHEET 4 A 4 ILE A 403 LYS A 405 -1 N ARG A 404 O ARG A 414 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1