data_2MFK # _entry.id 2MFK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2MFK pdb_00002mfk 10.2210/pdb2mfk/pdb RCSB RCSB103568 ? ? BMRB 19553 ? ? WWPDB D_1000103568 ? ? # _pdbx_database_related.db_id 19553 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MFK _pdbx_database_status.methods_development_category ? _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2013-10-15 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Naik, M.T.' 1 'Kung, C.C.-H.' 2 'Huang, T.' 3 # _citation.id primary _citation.title 'Solution structure of Blo 1 12 CBD domain.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Naik, M.T.' 1 ? primary 'Kung, C.C.-H.' 2 ? primary 'Huang, T.' 3 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Blo 1 12' _entity.formula_weight 7528.647 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Chitin-binding domain (CBD)' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GPLGSDLIVHEGGKTYHVVCHEEGPIPHPGNVHKYIICSKSGSLWYITVMPCSIGTKFDPISRNCVLDN _entity_poly.pdbx_seq_one_letter_code_can GPLGSDLIVHEGGKTYHVVCHEEGPIPHPGNVHKYIICSKSGSLWYITVMPCSIGTKFDPISRNCVLDN _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 ASP n 1 7 LEU n 1 8 ILE n 1 9 VAL n 1 10 HIS n 1 11 GLU n 1 12 GLY n 1 13 GLY n 1 14 LYS n 1 15 THR n 1 16 TYR n 1 17 HIS n 1 18 VAL n 1 19 VAL n 1 20 CYS n 1 21 HIS n 1 22 GLU n 1 23 GLU n 1 24 GLY n 1 25 PRO n 1 26 ILE n 1 27 PRO n 1 28 HIS n 1 29 PRO n 1 30 GLY n 1 31 ASN n 1 32 VAL n 1 33 HIS n 1 34 LYS n 1 35 TYR n 1 36 ILE n 1 37 ILE n 1 38 CYS n 1 39 SER n 1 40 LYS n 1 41 SER n 1 42 GLY n 1 43 SER n 1 44 LEU n 1 45 TRP n 1 46 TYR n 1 47 ILE n 1 48 THR n 1 49 VAL n 1 50 MET n 1 51 PRO n 1 52 CYS n 1 53 SER n 1 54 ILE n 1 55 GLY n 1 56 THR n 1 57 LYS n 1 58 PHE n 1 59 ASP n 1 60 PRO n 1 61 ILE n 1 62 SER n 1 63 ARG n 1 64 ASN n 1 65 CYS n 1 66 VAL n 1 67 LEU n 1 68 ASP n 1 69 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Blo t 12.0102' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Blomia tropicalis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 40697 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector pGEX6P-3 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 2MFK _struct_ref.pdbx_db_accession 2MFK _struct_ref.entity_id 1 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2MFK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 69 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 2MFK _struct_ref_seq.db_align_beg 75 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 143 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 75 _struct_ref_seq.pdbx_auth_seq_align_end 143 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 2 '2D 1H-15N HSQC' 1 2 1 '2D 1H-13C HSQC' 1 3 1 '3D HNCO' 1 4 1 '3D HNCA' 1 5 1 '3D HNCACB' 1 6 1 '3D CBCA(CO)NH' 1 7 1 '3D H(CCO)NH' 1 8 1 '3D CCcoNH' 1 9 1 '3D HCCH-COSY' 1 10 1 '3D HBHA(CO)NH' 1 11 1 2D-hbCBcgcdHD 1 12 1 '3D 1H-13C NOESYHSQC' 1 13 1 '3D 1H-15N NOESYHSQC' 1 14 3 '2D 1H-15N IPAP HSQC' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 6.0 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 295 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '1 mM [U-100% 13C; U-100% 15N] Blo t 12 CBD-1, 50 mM potassium phosphate-2, 100 mM sodium chloride-3, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '1 mM [U-100% 15N] Blo t 12 CBD-4, 50 mM potassium phosphate-5, 100 mM sodium chloride-6, 90% H2O/10% D2O' 2 '90% H2O/10% D2O' '1 mM [U-100% 15N] Blo t 12 CBD-7, 50 mM potassium phosphate-8, 100 mM sodium chloride-9, 11 mg/ml Pf1 phage-10, 90% H2O/10% D2O' 3 '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 500 Bruker AVANCE 1 'Bruker Avance' 600 Bruker AVANCE 2 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2MFK _pdbx_nmr_refine.method 'torsion angle dynamics, DGSA-distance geometry simulated annealing' _pdbx_nmr_refine.details ;Initial structure ensemble was calculated by semi-automated NOESY assignment by CYANA. The assignments were manually verified in Sparky and final structure annealing was performed in CYANA. Structure and restraints from CYANA were imported in Xplor-NIH for explicit water refinement. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 2MFK _pdbx_nmr_details.text 'NMR data was acquired at 295K using Shigemi NMR tubes.' # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation 0.17643 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 400 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MFK _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation 6.20 _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation 0.41 _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method PSVS # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MFK _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.ordinal _pdbx_nmr_software.version 'Bruker Biospin' collection TopSpin 1 3.0 'Bruker Biospin' processing TopSpin 2 3.0 Goddard 'chemical shift assignment' Sparky 3 ? Goddard 'peak picking' Sparky 4 ? 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 5 3.9 'Guntert, Mumenthaler and Wuthrich' 'geometry optimization' CYANA 6 3.9 'Bhattacharya and Montelione' validation PSVS 7 1.5 'Schwieters, Kuszewski, Tjandra and Clore' refinement 'X-PLOR NIH' 8 2.34 'Guntert, Mumenthaler and Wuthrich' refinement CYANA 9 ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ;The data deposited under this entry was used to solve structure of chitin-binding domain of allergen Blo t 12. The structure describes Blo t 12.0102 isoform identified from the mites found in Singapore. ; _exptl.entry_id 2MFK _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2MFK _struct.title 'NMR solution structure of chitin-binding domain from dust mite group XII allergen Blo t 12' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MFK _struct_keywords.pdbx_keywords ALLERGEN _struct_keywords.text 'Allergen, Chitin-binding Domain' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 20 SG ? ? ? 1_555 A CYS 38 SG ? ? A CYS 94 A CYS 112 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf2 disulf ? ? A CYS 52 SG ? ? ? 1_555 A CYS 65 SG ? ? A CYS 126 A CYS 139 1_555 ? ? ? ? ? ? ? 2.022 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 6 ? GLU A 11 ? ASP A 80 GLU A 85 A 2 LYS A 14 ? VAL A 19 ? LYS A 88 VAL A 93 B 1 GLY A 24 ? PRO A 27 ? GLY A 98 PRO A 101 B 2 LYS A 34 ? SER A 41 ? LYS A 108 SER A 115 B 3 LEU A 44 ? PRO A 51 ? LEU A 118 PRO A 125 C 1 THR A 56 ? ASP A 59 ? THR A 130 ASP A 133 C 2 ASN A 64 ? LEU A 67 ? ASN A 138 LEU A 141 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 11 ? N GLU A 85 O LYS A 14 ? O LYS A 88 B 1 2 N ILE A 26 ? N ILE A 100 O ILE A 36 ? O ILE A 110 B 2 3 N TYR A 35 ? N TYR A 109 O MET A 50 ? O MET A 124 C 1 2 N LYS A 57 ? N LYS A 131 O VAL A 66 ? O VAL A 140 # _atom_sites.entry_id 2MFK _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 75 75 GLY GLY A . n A 1 2 PRO 2 76 76 PRO PRO A . n A 1 3 LEU 3 77 77 LEU LEU A . n A 1 4 GLY 4 78 78 GLY GLY A . n A 1 5 SER 5 79 79 SER SER A . n A 1 6 ASP 6 80 80 ASP ASP A . n A 1 7 LEU 7 81 81 LEU LEU A . n A 1 8 ILE 8 82 82 ILE ILE A . n A 1 9 VAL 9 83 83 VAL VAL A . n A 1 10 HIS 10 84 84 HIS HIS A . n A 1 11 GLU 11 85 85 GLU GLU A . n A 1 12 GLY 12 86 86 GLY GLY A . n A 1 13 GLY 13 87 87 GLY GLY A . n A 1 14 LYS 14 88 88 LYS LYS A . n A 1 15 THR 15 89 89 THR THR A . n A 1 16 TYR 16 90 90 TYR TYR A . n A 1 17 HIS 17 91 91 HIS HIS A . n A 1 18 VAL 18 92 92 VAL VAL A . n A 1 19 VAL 19 93 93 VAL VAL A . n A 1 20 CYS 20 94 94 CYS CYS A . n A 1 21 HIS 21 95 95 HIS HIS A . n A 1 22 GLU 22 96 96 GLU GLU A . n A 1 23 GLU 23 97 97 GLU GLU A . n A 1 24 GLY 24 98 98 GLY GLY A . n A 1 25 PRO 25 99 99 PRO PRO A . n A 1 26 ILE 26 100 100 ILE ILE A . n A 1 27 PRO 27 101 101 PRO PRO A . n A 1 28 HIS 28 102 102 HIS HIS A . n A 1 29 PRO 29 103 103 PRO PRO A . n A 1 30 GLY 30 104 104 GLY GLY A . n A 1 31 ASN 31 105 105 ASN ASN A . n A 1 32 VAL 32 106 106 VAL VAL A . n A 1 33 HIS 33 107 107 HIS HIS A . n A 1 34 LYS 34 108 108 LYS LYS A . n A 1 35 TYR 35 109 109 TYR TYR A . n A 1 36 ILE 36 110 110 ILE ILE A . n A 1 37 ILE 37 111 111 ILE ILE A . n A 1 38 CYS 38 112 112 CYS CYS A . n A 1 39 SER 39 113 113 SER SER A . n A 1 40 LYS 40 114 114 LYS LYS A . n A 1 41 SER 41 115 115 SER SER A . n A 1 42 GLY 42 116 116 GLY GLY A . n A 1 43 SER 43 117 117 SER SER A . n A 1 44 LEU 44 118 118 LEU LEU A . n A 1 45 TRP 45 119 119 TRP TRP A . n A 1 46 TYR 46 120 120 TYR TYR A . n A 1 47 ILE 47 121 121 ILE ILE A . n A 1 48 THR 48 122 122 THR THR A . n A 1 49 VAL 49 123 123 VAL VAL A . n A 1 50 MET 50 124 124 MET MET A . n A 1 51 PRO 51 125 125 PRO PRO A . n A 1 52 CYS 52 126 126 CYS CYS A . n A 1 53 SER 53 127 127 SER SER A . n A 1 54 ILE 54 128 128 ILE ILE A . n A 1 55 GLY 55 129 129 GLY GLY A . n A 1 56 THR 56 130 130 THR THR A . n A 1 57 LYS 57 131 131 LYS LYS A . n A 1 58 PHE 58 132 132 PHE PHE A . n A 1 59 ASP 59 133 133 ASP ASP A . n A 1 60 PRO 60 134 134 PRO PRO A . n A 1 61 ILE 61 135 135 ILE ILE A . n A 1 62 SER 62 136 136 SER SER A . n A 1 63 ARG 63 137 137 ARG ARG A . n A 1 64 ASN 64 138 138 ASN ASN A . n A 1 65 CYS 65 139 139 CYS CYS A . n A 1 66 VAL 66 140 140 VAL VAL A . n A 1 67 LEU 67 141 141 LEU LEU A . n A 1 68 ASP 68 142 142 ASP ASP A . n A 1 69 ASN 69 143 143 ASN ASN A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-11-19 2 'Structure model' 1 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' pdbx_database_status 3 2 'Structure model' pdbx_nmr_software 4 2 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 2 'Structure model' '_pdbx_nmr_software.name' 5 2 'Structure model' '_pdbx_nmr_spectrometer.model' # _pdbx_entry_details.entry_id 2MFK _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'FIRST FIVE RESIDUES (GPLGS) ARE EXPRESSION TAGS' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_nmr_ensemble_rms.atom_type ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.chain_range_begin ? _pdbx_nmr_ensemble_rms.chain_range_end ? _pdbx_nmr_ensemble_rms.coord_average_rmsd_method ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev_error ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev_error ? _pdbx_nmr_ensemble_rms.distance_rms_dev 0.01981 _pdbx_nmr_ensemble_rms.distance_rms_dev_error 0.01948 _pdbx_nmr_ensemble_rms.entry_id 2MFK _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev ? _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev_error ? _pdbx_nmr_ensemble_rms.residue_range_begin ? _pdbx_nmr_ensemble_rms.residue_range_end ? # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'Blo t 12 CBD-1' 1 ? mM '[U-100% 13C; U-100% 15N]' 1 'potassium phosphate-2' 50 ? mM ? 1 'sodium chloride-3' 100 ? mM ? 1 'Blo t 12 CBD-4' 1 ? mM '[U-100% 15N]' 2 'potassium phosphate-5' 50 ? mM ? 2 'sodium chloride-6' 100 ? mM ? 2 'Blo t 12 CBD-7' 1 ? mM '[U-100% 15N]' 3 'potassium phosphate-8' 50 ? mM ? 3 'sodium chloride-9' 100 ? mM ? 3 'Pf1 phage-10' 11 ? mg/mL ? 3 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count 6 _pdbx_nmr_constraints.entry_id 2MFK _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count 52 _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 1207 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count 264 _pdbx_nmr_constraints.NOE_long_range_total_count 468 _pdbx_nmr_constraints.NOE_medium_range_total_count 119 _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count 356 _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count 0 _pdbx_nmr_constraints.protein_other_angle_constraints_total_count 0 _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count 47 _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count 47 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 5 OE2 A GLU 85 ? ? HZ3 A LYS 108 ? ? 1.59 2 15 OE2 A GLU 85 ? ? HZ3 A LYS 108 ? ? 1.58 3 15 OD1 A ASP 80 ? ? HD1 A HIS 91 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 2 PRO A 76 ? ? -65.62 99.83 2 2 ASP A 80 ? ? -160.14 104.80 3 3 ASP A 80 ? ? -161.80 94.57 4 3 ARG A 137 ? ? 70.73 51.02 5 4 LEU A 77 ? ? -173.04 136.73 6 4 ASN A 105 ? ? -167.32 102.04 7 5 PRO A 76 ? ? -76.51 34.57 8 5 LEU A 77 ? ? -88.52 33.99 9 5 SER A 115 ? ? -108.23 79.81 10 5 ARG A 137 ? ? 74.62 41.91 11 7 SER A 115 ? ? -102.15 77.98 12 8 ASN A 105 ? ? -167.63 105.31 13 8 ARG A 137 ? ? 72.25 48.60 14 9 ARG A 137 ? ? 71.31 46.21 15 10 ASN A 105 ? ? -168.88 117.70 16 10 ARG A 137 ? ? 73.11 41.52 17 11 ARG A 137 ? ? 71.21 48.83 18 12 ASN A 105 ? ? -163.84 87.30 19 12 ARG A 137 ? ? 70.76 41.57 20 14 ASN A 105 ? ? -167.40 106.89 21 15 PRO A 76 ? ? -78.46 44.11 22 15 ASN A 105 ? ? -169.23 104.21 23 16 ASN A 105 ? ? -168.07 97.47 24 17 ASN A 105 ? ? -168.24 101.86 25 18 ASP A 80 ? ? -164.44 113.21 26 18 ARG A 137 ? ? 70.33 43.22 27 19 ASN A 105 ? ? -169.15 109.85 28 19 ARG A 137 ? ? 66.81 62.87 29 20 ARG A 137 ? ? 66.42 62.02 #