HEADER TRANSFERASE 18-OCT-13 2MFQ TITLE NMR SOLUTION STRUCTURES OF FRS2A PTB DOMAIN WITH NEUROTROPHIN RECEPTOR TITLE 2 TRKB COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBROBLAST GROWTH FACTOR RECEPTOR SUBSTRATE 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: IRS-TYPE PTB DOMAIN, RESIDUES 11-122; COMPND 5 SYNONYM: FGFR SUBSTRATE 2, FGFR-SIGNALING ADAPTOR SNT, SUC1- COMPND 6 ASSOCIATED NEUROTROPHIC FACTOR TARGET 1, SNT-1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: BDNF/NT-3 GROWTH FACTORS RECEPTOR; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: UNP RESIDUES 497-519; COMPND 12 SYNONYM: GP145-TRKB, TRK-B, NEUROTROPHIC TYROSINE KINASE RECEPTOR COMPND 13 TYPE 2, TRKB TYROSINE KINASE, TROPOMYOSIN-RELATED KINASE B; COMPND 14 EC: 2.7.10.1; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FRS2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET28B, PGEX 4T1; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606 KEYWDS TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR L.ZENG,M.ZHOU REVDAT 2 25-JUN-14 2MFQ 1 JRNL REVDAT 1 05-MAR-14 2MFQ 0 JRNL AUTH L.ZENG,M.KUTI,S.MUJTABA,M.M.ZHOU JRNL TITL STRUCTURAL INSIGHTS INTO FRS2 ALPHA PTB DOMAIN RECOGNITION JRNL TITL 2 BY NEUROTROPHIN RECEPTOR TRKB. JRNL REF PROTEINS V. 82 1534 2014 JRNL REFN ISSN 0887-3585 JRNL PMID 24470253 JRNL DOI 10.1002/PROT.24523 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 2.2, CNS REMARK 3 AUTHORS : LINGE, O'DONOGHUE AND NILGES (ARIA), BRUNGER, REMARK 3 ADAMS, CLORE, GROS, NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MFQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-OCT-13. REMARK 100 THE RCSB ID CODE IS RCSB103573. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 100 MM SODIUM PHOSPHATE, 5 MM [U REMARK 210 -100% 2H] DTT, 0.5 MM [U-100% 2H] REMARK 210 EDTA, 100% D2O; 100 MM SODIUM REMARK 210 PHOSPHATE, 5 MM [U-100% 2H] DTT, REMARK 210 0.5 MM [U-100% 2H] EDTA, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCACB; 3D HNZ(CO)CACB; 3D 1H REMARK 210 -15N NOESY; 3D 1H-15N TOCSY; 3D REMARK 210 1H-13C NOESY ALIPHATIC; 3D 1H-13C REMARK 210 NOESY AROMATIC; 3D 13C-EDITED REMARK 210 13C/15N-FILTERED NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2.3, NMRVIEW 5.04, CNS REMARK 210 1.2 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O VAL B 497 H ILE B 504 1.54 REMARK 500 O PHE A 89 HG CYS A 91 1.55 REMARK 500 O ILE A 24 H LYS A 90 1.55 REMARK 500 O ARG A 93 H LEU A 97 1.56 REMARK 500 O ASP A 68 H LEU A 71 1.56 REMARK 500 HE ARG A 64 OE1 GLU A 75 1.58 REMARK 500 O MET A 100 H ILE A 104 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 9 66.84 -163.90 REMARK 500 1 ASP A 11 29.56 -140.63 REMARK 500 1 ASP A 15 3.10 -69.30 REMARK 500 1 HIS A 17 -50.15 74.67 REMARK 500 1 ARG A 18 -64.78 -108.14 REMARK 500 1 ASP A 28 4.85 55.23 REMARK 500 1 ASP A 29 -6.53 -145.63 REMARK 500 1 GLU A 32 87.30 -53.38 REMARK 500 1 LEU A 33 33.54 -91.41 REMARK 500 1 THR A 41 -167.23 -123.85 REMARK 500 1 THR A 49 -171.76 -69.65 REMARK 500 1 ASP A 53 170.60 65.19 REMARK 500 1 SER A 54 99.38 -52.63 REMARK 500 1 LEU A 62 87.48 -65.52 REMARK 500 1 SER A 69 95.96 -25.06 REMARK 500 1 ARG A 93 39.18 -91.99 REMARK 500 1 SER A 109 -17.03 68.32 REMARK 500 1 ILE A 110 94.30 63.80 REMARK 500 1 VAL A 113 169.16 171.80 REMARK 500 1 GLU A 114 86.05 61.18 REMARK 500 1 PRO A 116 58.14 -66.67 REMARK 500 1 VAL A 117 86.47 32.55 REMARK 500 1 GLU A 119 90.39 56.98 REMARK 500 2 HIS A 9 73.24 -166.03 REMARK 500 2 ASP A 11 52.89 -167.25 REMARK 500 2 PRO A 14 60.24 -65.64 REMARK 500 2 ASN A 16 -159.03 -176.84 REMARK 500 2 HIS A 17 -86.88 56.78 REMARK 500 2 ASP A 28 4.33 55.23 REMARK 500 2 ASP A 29 -8.61 -146.47 REMARK 500 2 GLU A 32 77.66 -56.96 REMARK 500 2 THR A 41 -163.70 -116.72 REMARK 500 2 THR A 49 -169.81 -71.40 REMARK 500 2 ARG A 50 -70.09 -78.01 REMARK 500 2 ASP A 53 168.55 68.44 REMARK 500 2 SER A 54 98.68 -55.55 REMARK 500 2 LEU A 62 82.56 -69.64 REMARK 500 2 SER A 69 97.64 -22.14 REMARK 500 2 GLN A 84 33.44 70.14 REMARK 500 2 ARG A 93 38.93 -99.52 REMARK 500 2 SER A 109 -29.93 70.40 REMARK 500 2 ILE A 110 102.56 70.81 REMARK 500 2 VAL A 113 175.68 178.75 REMARK 500 2 GLU A 114 77.78 54.27 REMARK 500 2 VAL A 117 94.59 40.63 REMARK 500 2 GLU A 119 72.76 69.52 REMARK 500 3 ASP A 15 -58.11 -171.44 REMARK 500 3 ASN A 16 13.21 -161.90 REMARK 500 3 ASP A 28 5.57 49.22 REMARK 500 3 GLU A 32 83.83 -51.99 REMARK 500 REMARK 500 THIS ENTRY HAS 382 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19562 RELATED DB: BMRB DBREF 2MFQ A 11 122 UNP Q8WU20 FRS2_HUMAN 11 122 DBREF 2MFQ B 493 515 UNP Q16620 NTRK2_HUMAN 497 519 SEQADV 2MFQ SER A 8 UNP Q8WU20 EXPRESSION TAG SEQADV 2MFQ HIS A 9 UNP Q8WU20 EXPRESSION TAG SEQADV 2MFQ MET A 10 UNP Q8WU20 EXPRESSION TAG SEQRES 1 A 115 SER HIS MET ASP THR VAL PRO ASP ASN HIS ARG ASN LYS SEQRES 2 A 115 PHE LYS VAL ILE ASN VAL ASP ASP ASP GLY ASN GLU LEU SEQRES 3 A 115 GLY SER GLY ILE MET GLU LEU THR ASP THR GLU LEU ILE SEQRES 4 A 115 LEU TYR THR ARG LYS ARG ASP SER VAL LYS TRP HIS TYR SEQRES 5 A 115 LEU CYS LEU ARG ARG TYR GLY TYR ASP SER ASN LEU PHE SEQRES 6 A 115 SER PHE GLU SER GLY ARG ARG CYS GLN THR GLY GLN GLY SEQRES 7 A 115 ILE PHE ALA PHE LYS CYS ALA ARG ALA GLU GLU LEU PHE SEQRES 8 A 115 ASN MET LEU GLN GLU ILE MET GLN ASN ASN SER ILE ASN SEQRES 9 A 115 VAL VAL GLU GLU PRO VAL VAL GLU ARG ASN ASN SEQRES 1 B 23 GLY PRO ASP ALA VAL ILE ILE GLY MET THR LYS ILE PRO SEQRES 2 B 23 VAL ILE GLU ASN PRO GLN PTR PHE GLY ILE MODRES 2MFQ PTR B 512 TYR O-PHOSPHOTYROSINE HET PTR B 512 25 HETNAM PTR O-PHOSPHOTYROSINE HETSYN PTR PHOSPHONOTYROSINE FORMUL 2 PTR C9 H12 N O6 P HELIX 1 1 ARG A 93 SER A 109 1 17 SHEET 1 A 4 LYS A 20 LYS A 22 0 SHEET 2 A 4 ILE A 37 LEU A 40 -1 O MET A 38 N PHE A 21 SHEET 3 A 4 LEU A 45 TYR A 48 -1 O ILE A 46 N GLU A 39 SHEET 4 A 4 SER A 54 VAL A 55 -1 O VAL A 55 N LEU A 47 SHEET 1 B 5 ILE A 86 PHE A 89 0 SHEET 2 B 5 LEU A 71 SER A 76 -1 N PHE A 72 O PHE A 89 SHEET 3 B 5 LEU A 62 ASP A 68 -1 N ASP A 68 O LEU A 71 SHEET 4 B 5 THR B 502 GLU B 508 -1 O ILE B 507 N TYR A 65 SHEET 5 B 5 ALA B 496 ILE B 499 -1 N VAL B 497 O ILE B 504 LINK C GLN B 511 N PTR B 512 1555 1555 1.33 LINK C PTR B 512 N PHE B 513 1555 1555 1.33 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1