HEADER ANTIMICROBIAL PROTEIN, MEMBRANE PROTEIN 05-DEC-13 2MHW TITLE THE SOLUTION NMR STRUCTURE OF MAXIMIN-4 IN SDS MICELLES COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTIMICROBIAL PEPTIDE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 44-70; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: BOMBINA MAXIMA; SOURCE 4 ORGANISM_COMMON: GIANT FIRE-BELLIED TOAD, CHINESE RED BELLY TOAD; SOURCE 5 ORGANISM_TAXID: 161274 KEYWDS MEMBRANE PEPTIDES, LIPID BILAYERS, BACTERIAL RESISTANCE, KEYWDS 2 ANTIMICROBIAL PEPTIDES, ANTIMICROBIAL PROTEIN, MEMBRANE PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR O.TOKE,Z.BANOCZI,P.KIRALY,R.HEINZMANN,J.BURCK,A.S.ULRICH,F.HUDECZ REVDAT 2 01-MAY-24 2MHW 1 REMARK REVDAT 1 25-DEC-13 2MHW 0 JRNL AUTH O.TOKE,Z.BANOCZI,P.KIRALY,R.HEINZMANN,J.BURCK,A.S.ULRICH, JRNL AUTH 2 F.HUDECZ JRNL TITL A KINKED ANTIMICROBIAL PEPTIDE FROM BOMBINA MAXIMA. I. JRNL TITL 2 THREE-DIMENSIONAL STRUCTURE DETERMINED BY NMR IN JRNL TITL 3 MEMBRANE-MIMICKING ENVIRONMENTS. JRNL REF EUR.BIOPHYS.J. V. 40 447 2011 JRNL REFN ISSN 0175-7571 JRNL PMID 21234559 JRNL DOI 10.1007/S00249-010-0657-0 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMRJ, ARIA REMARK 3 AUTHORS : VARIAN (VNMRJ), LINGE, O'DONOGHUE AND NILGES REMARK 3 (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MHW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000103633. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 313 REMARK 210 PH : 5.0 REMARK 210 IONIC STRENGTH : 220 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1-1.2 MM MAXIMIN, 10 MM SODIUM REMARK 210 -PHOSPHATE, 200 MM [U-100% 2H] REMARK 210 D25-SODIUM-DODECYL-SULFATE, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H TOCSY; 2D 1H-1H NOESY; REMARK 210 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : VARIAN NMR SYSTEM REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : FELIX, ARIA REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HA ALA A 22 HB1 ALA A 26 1.12 REMARK 500 HG22 VAL A 5 HD13 LEU A 6 1.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 TYR A 25 CB - CG - CD1 ANGL. DEV. = -3.8 DEGREES REMARK 500 2 TYR A 25 CB - CG - CD1 ANGL. DEV. = -3.7 DEGREES REMARK 500 3 TYR A 25 CB - CG - CD1 ANGL. DEV. = -3.7 DEGREES REMARK 500 5 TYR A 25 CB - CG - CD1 ANGL. DEV. = -3.6 DEGREES REMARK 500 6 TYR A 25 CB - CG - CD1 ANGL. DEV. = -3.8 DEGREES REMARK 500 7 TYR A 25 CB - CG - CD1 ANGL. DEV. = -3.8 DEGREES REMARK 500 8 TYR A 25 CB - CG - CD1 ANGL. DEV. = -3.8 DEGREES REMARK 500 9 TYR A 25 CB - CG - CD1 ANGL. DEV. = -3.7 DEGREES REMARK 500 10 TYR A 25 CB - CG - CD1 ANGL. DEV. = -3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 2 -77.60 -118.83 REMARK 500 1 LEU A 6 -22.16 176.25 REMARK 500 1 LEU A 7 -77.04 -65.06 REMARK 500 1 LYS A 15 -69.96 -92.77 REMARK 500 1 LEU A 17 -8.11 -59.96 REMARK 500 2 ILE A 2 -74.05 -104.86 REMARK 500 2 LEU A 6 -22.37 178.13 REMARK 500 2 LEU A 7 -78.38 -63.01 REMARK 500 2 LYS A 15 -72.09 -86.10 REMARK 500 3 ILE A 2 -81.53 -116.27 REMARK 500 3 LEU A 6 -22.14 -179.87 REMARK 500 3 LEU A 7 -79.07 -64.91 REMARK 500 3 LYS A 15 -69.28 -94.74 REMARK 500 4 ILE A 2 -79.61 -100.74 REMARK 500 4 LEU A 6 -16.45 -166.50 REMARK 500 4 LYS A 15 -69.60 -95.22 REMARK 500 5 ILE A 2 -61.11 -103.11 REMARK 500 5 VAL A 5 -59.49 -141.81 REMARK 500 5 LEU A 6 -17.88 -171.82 REMARK 500 5 LYS A 15 -70.27 -92.56 REMARK 500 6 ILE A 2 -76.26 -116.38 REMARK 500 6 LEU A 6 -23.34 -175.42 REMARK 500 6 LEU A 7 -77.09 -62.44 REMARK 500 6 LYS A 15 -70.89 -96.05 REMARK 500 7 ILE A 2 -74.73 -130.87 REMARK 500 7 LEU A 6 -22.91 -176.41 REMARK 500 7 LEU A 7 -76.74 -65.18 REMARK 500 7 LYS A 15 -72.25 -95.38 REMARK 500 8 ILE A 2 -75.89 -103.72 REMARK 500 8 LEU A 6 -23.02 -178.03 REMARK 500 8 LEU A 7 -74.58 -63.92 REMARK 500 8 LYS A 15 -70.61 -95.46 REMARK 500 8 LEU A 17 -2.07 -58.40 REMARK 500 9 ILE A 2 -79.13 -105.74 REMARK 500 9 LEU A 6 -20.85 178.40 REMARK 500 9 LYS A 15 -69.57 -95.08 REMARK 500 9 LEU A 17 -2.68 -59.61 REMARK 500 10 ILE A 2 -77.06 -95.07 REMARK 500 10 LEU A 6 -22.27 173.84 REMARK 500 10 LEU A 7 -74.70 -64.08 REMARK 500 10 LYS A 15 -70.56 -92.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19658 RELATED DB: BMRB DBREF 2MHW A 1 27 UNP C3RSY7 C3RSY7_BOMMX 44 70 SEQRES 1 A 27 GLY ILE GLY GLY VAL LEU LEU SER ALA GLY LYS ALA ALA SEQRES 2 A 27 LEU LYS GLY LEU ALA LYS VAL LEU ALA GLU LYS TYR ALA SEQRES 3 A 27 ASN HELIX 1 1 LEU A 7 GLY A 16 1 10 HELIX 2 2 LEU A 17 TYR A 25 1 9 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1