HEADER ANTIMICROBIAL PROTEIN 28-MAR-14 2MN5 TITLE NMR STRUCTURE OF COPSIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: COPSIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COPRINOPSIS CINEREA; SOURCE 3 ORGANISM_TAXID: 5346; SOURCE 4 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS ANTIBIOTIC AND ANTIMICROBIAL PROTEIN, ANTIMICROBIAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR D.HOFMANN,G.WIDER,A.ESSIG,M.AEBI REVDAT 5 06-NOV-24 2MN5 1 REMARK REVDAT 4 25-DEC-19 2MN5 1 REMARK SEQRES LINK REVDAT 3 07-JAN-15 2MN5 1 JRNL REVDAT 2 05-NOV-14 2MN5 1 JRNL REVDAT 1 29-OCT-14 2MN5 0 JRNL AUTH A.ESSIG,D.HOFMANN,D.MUNCH,S.GAYATHRI,M.KUNZLER,P.T.KALLIO, JRNL AUTH 2 H.G.SAHL,G.WIDER,T.SCHNEIDER,M.AEBI JRNL TITL COPSIN, A NOVEL PEPTIDE-BASED FUNGAL ANTIBIOTIC INTERFERING JRNL TITL 2 WITH THE PEPTIDOGLYCAN SYNTHESIS. JRNL REF J.BIOL.CHEM. V. 289 34953 2014 JRNL REFN ISSN 0021-9258 JRNL PMID 25342741 JRNL DOI 10.1074/JBC.M114.599878 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER 9 REMARK 3 AUTHORS : CASE, DARDEN, CHEATHAM, III, SIMMERLING, WANG, REMARK 3 DUKE, LUO, ... AND KOLLMAN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MN5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000103814. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293; 293 REMARK 210 PH : 6.8; 7.4 REMARK 210 IONIC STRENGTH : 70; 70 REMARK 210 PRESSURE : AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : 20 MM SODIUM PHOSPHATE, 50 MM REMARK 210 SODIUM CHLORIDE, 100% D2O; 20 MM REMARK 210 SODIUM PHOSPHATE, 50 MM SODIUM REMARK 210 CHLORIDE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 2D 1H-1H TOCSY; 2D DQF-COSY; 2D REMARK 210 1H-1H NOESY; 3D 1H-15N TOCSY; 3D REMARK 210 HN(CO)CA; 3D 1H-15N NOESY; 3D 1H- REMARK 210 13C NOESY; 3D HNCO REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 700 MHZ; 900 REMARK 210 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 3.0, PROCHECKNMR, XEASY REMARK 210 1.8.4, TOPSPIN 3.0, TALOS TALOS+ REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE CALCULATION WAS PERFORMED USING 2D AND 3D REMARK 210 NOESY EXPERIMENTS, INCLUDING HYDROGEN BONDS DETERMINED BY LONG REMARK 210 RANGE HNCO SPECTRA REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 12 -26.41 -156.12 REMARK 500 2 CYS A 3 87.63 -150.21 REMARK 500 2 SER A 13 -22.05 -146.71 REMARK 500 2 LEU A 44 16.66 52.22 REMARK 500 3 SER A 13 -21.84 -146.27 REMARK 500 3 LEU A 44 18.89 51.18 REMARK 500 4 CYS A 3 84.68 -150.59 REMARK 500 4 SER A 13 -36.61 -154.73 REMARK 500 4 LEU A 44 20.80 -144.36 REMARK 500 5 THR A 12 -26.23 -155.45 REMARK 500 5 LEU A 44 11.73 54.50 REMARK 500 6 CYS A 3 88.56 -160.07 REMARK 500 6 SER A 13 -19.76 -143.07 REMARK 500 6 LEU A 44 20.74 -144.44 REMARK 500 7 SER A 13 -19.15 -140.39 REMARK 500 7 LEU A 44 22.97 -145.17 REMARK 500 8 CYS A 3 84.88 -151.00 REMARK 500 8 SER A 13 -37.91 -155.04 REMARK 500 8 LEU A 44 20.90 -143.96 REMARK 500 9 SER A 13 -22.18 -145.93 REMARK 500 9 LEU A 44 21.71 -146.78 REMARK 500 10 CYS A 3 87.30 -152.05 REMARK 500 10 THR A 12 -26.95 -154.48 REMARK 500 10 LEU A 44 18.38 -141.54 REMARK 500 11 SER A 13 -38.91 -153.61 REMARK 500 12 CYS A 3 84.92 -150.18 REMARK 500 12 SER A 13 -22.66 -144.93 REMARK 500 13 SER A 13 -35.07 -149.86 REMARK 500 13 LEU A 44 17.21 52.92 REMARK 500 14 ASN A 2 0.77 59.15 REMARK 500 14 CYS A 3 74.08 -152.35 REMARK 500 14 SER A 13 -24.10 -149.94 REMARK 500 15 SER A 13 -22.40 -145.86 REMARK 500 15 LEU A 44 24.81 -144.90 REMARK 500 17 THR A 12 -26.04 -154.44 REMARK 500 17 LEU A 44 14.71 52.53 REMARK 500 18 CYS A 3 86.84 -152.70 REMARK 500 18 SER A 13 -19.51 -140.51 REMARK 500 19 SER A 13 -19.36 -140.71 REMARK 500 20 SER A 13 -40.25 -154.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19880 RELATED DB: BMRB DBREF 2MN5 A 1 57 PDB 2MN5 2MN5 1 57 SEQRES 1 A 57 PCA ASN CYS PRO THR ARG ARG GLY LEU CYS VAL THR SER SEQRES 2 A 57 GLY LEU THR ALA CYS ARG ASN HIS CYS ARG SER CYS HIS SEQRES 3 A 57 ARG GLY ASP VAL GLY CYS VAL ARG CYS SER ASN ALA GLN SEQRES 4 A 57 CYS THR GLY PHE LEU GLY THR THR CYS THR CYS ILE ASN SEQRES 5 A 57 PRO CYS PRO ARG CYS MODRES 2MN5 PCA A 1 GLN PYROGLUTAMIC ACID HET PCA A 1 13 HETNAM PCA PYROGLUTAMIC ACID FORMUL 1 PCA C5 H7 N O3 HELIX 1 1 ARG A 7 VAL A 11 5 5 HELIX 2 2 GLY A 14 ARG A 23 1 10 SHEET 1 A 2 HIS A 26 ARG A 27 0 SHEET 2 A 2 CYS A 32 VAL A 33 -1 O VAL A 33 N HIS A 26 SHEET 1 B 2 ASN A 37 THR A 41 0 SHEET 2 B 2 THR A 47 ILE A 51 -1 O ILE A 51 N ASN A 37 SSBOND 1 CYS A 3 CYS A 32 1555 1555 2.03 SSBOND 2 CYS A 10 CYS A 40 1555 1555 2.04 SSBOND 3 CYS A 18 CYS A 48 1555 1555 2.04 SSBOND 4 CYS A 22 CYS A 50 1555 1555 2.04 SSBOND 5 CYS A 25 CYS A 57 1555 1555 2.04 SSBOND 6 CYS A 35 CYS A 54 1555 1555 2.05 LINK C PCA A 1 N ASN A 2 1555 1555 1.34 CISPEP 1 ASN A 52 PRO A 53 1 -2.01 CISPEP 2 ASN A 52 PRO A 53 2 -2.74 CISPEP 3 ASN A 52 PRO A 53 3 -1.20 CISPEP 4 ASN A 52 PRO A 53 4 -1.49 CISPEP 5 ASN A 52 PRO A 53 5 -1.58 CISPEP 6 ASN A 52 PRO A 53 6 -1.75 CISPEP 7 ASN A 52 PRO A 53 7 -0.36 CISPEP 8 ASN A 52 PRO A 53 8 -1.75 CISPEP 9 ASN A 52 PRO A 53 9 -2.07 CISPEP 10 ASN A 52 PRO A 53 10 -1.93 CISPEP 11 ASN A 52 PRO A 53 11 -1.53 CISPEP 12 ASN A 52 PRO A 53 12 -0.82 CISPEP 13 ASN A 52 PRO A 53 13 -1.73 CISPEP 14 ASN A 52 PRO A 53 14 -0.95 CISPEP 15 ASN A 52 PRO A 53 15 -2.00 CISPEP 16 ASN A 52 PRO A 53 16 -1.41 CISPEP 17 ASN A 52 PRO A 53 17 -2.12 CISPEP 18 ASN A 52 PRO A 53 18 -1.26 CISPEP 19 ASN A 52 PRO A 53 19 -2.67 CISPEP 20 ASN A 52 PRO A 53 20 -1.63 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 HETATM 1 N PCA A 1 -16.315 -3.244 -3.836 1.00 0.00 N HETATM 2 CA PCA A 1 -16.294 -2.751 -2.475 1.00 0.00 C HETATM 3 CB PCA A 1 -15.576 -3.862 -1.692 1.00 0.00 C HETATM 4 CG PCA A 1 -15.960 -5.112 -2.500 1.00 0.00 C HETATM 5 CD PCA A 1 -16.174 -4.562 -3.896 1.00 0.00 C HETATM 6 OE PCA A 1 -16.206 -5.253 -4.910 1.00 0.00 O HETATM 7 C PCA A 1 -15.573 -1.413 -2.353 1.00 0.00 C HETATM 8 O PCA A 1 -14.936 -0.958 -3.302 1.00 0.00 O HETATM 9 HA PCA A 1 -17.318 -2.657 -2.113 1.00 0.00 H HETATM 10 HB2 PCA A 1 -14.498 -3.710 -1.745 1.00 0.00 H HETATM 11 HB3 PCA A 1 -15.915 -3.924 -0.658 1.00 0.00 H HETATM 12 HG2 PCA A 1 -16.896 -5.523 -2.121 1.00 0.00 H HETATM 13 HG3 PCA A 1 -15.163 -5.856 -2.476 1.00 0.00 H