HEADER TRANSPORT PROTEIN 31-MAR-14 2MN6 TITLE SOLUTION STRUCTURE OF DIMERIC TATA OF TWIN-ARGININE TRANSLOCATION TITLE 2 SYSTEM FROM E. COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA; COMPND 3 CHAIN: B, A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: TATA, MTTA1, YIGT, B3836, JW3813; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET-21A KEYWDS TRANSPORT PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR Y.ZHANG,Y.HU,C.JIN REVDAT 2 01-MAY-24 2MN6 1 REMARK SEQADV REVDAT 1 15-APR-15 2MN6 0 JRNL AUTH Y.ZHANG,Y.HU,H.LI,C.JIN JRNL TITL STRUCTURAL BASIS FOR TATA OLIGOMERIZATION: AN NMR STUDY OF JRNL TITL 2 ESCHERICHIA COLI TATA DIMERIC STRUCTURE JRNL REF PLOS ONE V. 9 03157 2014 JRNL REFN ESSN 1932-6203 JRNL PMID 25090434 JRNL DOI 10.1371/JOURNAL.PONE.0103157 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, X-PLOR NIH REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), SCHWIETERS, KUSZEWSKI, TJANDRA AND REMARK 3 CLORE (X-PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MN6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000103815. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 0.05 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.7 MM [U-99% 13C; U-99% 15N] REMARK 210 PROTEIN-1, 0.8 MM PROTEIN-2, 50 REMARK 210 MM SODIUM PHOSPHATE-3, 120 MM [U- REMARK 210 2H] DPC-4, 90% H2O/10% D2O; 1.2 REMARK 210 MM [U-99% 13C; U-99% 15N] REMARK 210 PROTEIN-5, 50 MM SODIUM REMARK 210 PHOSPHATE-6, 100 MM DPC-7, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-13C NOESY; 2D 1H-15N HSQC; REMARK 210 2D 1H-13C HSQC; 3D 1H-15N NOESY; REMARK 210 3D 1H-13C NOESY ALIPHATIC; 3D REMARK 210 HNCO; 3D HNCA REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 700 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW, TOPSPIN, X-PLOR NIH, REMARK 210 TALOS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING NOES FROM FILTERED REMARK 210 -NOESY SPECTRA REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 MET B -2 REMARK 465 CYS B -1 REMARK 465 GLY B 0 REMARK 465 PRO B 48 REMARK 465 LYS B 49 REMARK 465 GLN B 50 REMARK 465 ASP B 51 REMARK 465 LYS B 52 REMARK 465 THR B 53 REMARK 465 SER B 54 REMARK 465 GLN B 55 REMARK 465 ASP B 56 REMARK 465 ALA B 57 REMARK 465 ASP B 58 REMARK 465 PHE B 59 REMARK 465 THR B 60 REMARK 465 ALA B 61 REMARK 465 LYS B 62 REMARK 465 THR B 63 REMARK 465 ILE B 64 REMARK 465 ALA B 65 REMARK 465 ASP B 66 REMARK 465 LYS B 67 REMARK 465 GLN B 68 REMARK 465 ALA B 69 REMARK 465 ASP B 70 REMARK 465 THR B 71 REMARK 465 ASN B 72 REMARK 465 GLN B 73 REMARK 465 GLU B 74 REMARK 465 GLN B 75 REMARK 465 ALA B 76 REMARK 465 LYS B 77 REMARK 465 THR B 78 REMARK 465 GLU B 79 REMARK 465 ASP B 80 REMARK 465 ALA B 81 REMARK 465 LYS B 82 REMARK 465 ARG B 83 REMARK 465 HIS B 84 REMARK 465 ASP B 85 REMARK 465 LYS B 86 REMARK 465 GLU B 87 REMARK 465 GLN B 88 REMARK 465 VAL B 89 REMARK 465 LEU B 90 REMARK 465 GLU B 91 REMARK 465 HIS B 92 REMARK 465 HIS B 93 REMARK 465 HIS B 94 REMARK 465 HIS B 95 REMARK 465 HIS B 96 REMARK 465 HIS B 97 REMARK 465 MET A -2 REMARK 465 CYS A -1 REMARK 465 GLY A 0 REMARK 465 PRO A 48 REMARK 465 LYS A 49 REMARK 465 GLN A 50 REMARK 465 ASP A 51 REMARK 465 LYS A 52 REMARK 465 THR A 53 REMARK 465 SER A 54 REMARK 465 GLN A 55 REMARK 465 ASP A 56 REMARK 465 ALA A 57 REMARK 465 ASP A 58 REMARK 465 PHE A 59 REMARK 465 THR A 60 REMARK 465 ALA A 61 REMARK 465 LYS A 62 REMARK 465 THR A 63 REMARK 465 ILE A 64 REMARK 465 ALA A 65 REMARK 465 ASP A 66 REMARK 465 LYS A 67 REMARK 465 GLN A 68 REMARK 465 ALA A 69 REMARK 465 ASP A 70 REMARK 465 THR A 71 REMARK 465 ASN A 72 REMARK 465 GLN A 73 REMARK 465 GLU A 74 REMARK 465 GLN A 75 REMARK 465 ALA A 76 REMARK 465 LYS A 77 REMARK 465 THR A 78 REMARK 465 GLU A 79 REMARK 465 ASP A 80 REMARK 465 ALA A 81 REMARK 465 LYS A 82 REMARK 465 ARG A 83 REMARK 465 HIS A 84 REMARK 465 ASP A 85 REMARK 465 LYS A 86 REMARK 465 GLU A 87 REMARK 465 GLN A 88 REMARK 465 VAL A 89 REMARK 465 LEU A 90 REMARK 465 GLU A 91 REMARK 465 HIS A 92 REMARK 465 HIS A 93 REMARK 465 HIS A 94 REMARK 465 HIS A 95 REMARK 465 HIS A 96 REMARK 465 HIS A 97 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER B 27 -70.26 -98.64 REMARK 500 1 ASP B 46 85.09 68.74 REMARK 500 1 THR A 22 -0.28 62.89 REMARK 500 1 SER A 27 -71.96 -98.50 REMARK 500 2 LYS B 24 -25.15 -146.47 REMARK 500 2 ASP B 46 77.18 67.69 REMARK 500 2 LYS A 23 -67.52 -126.13 REMARK 500 2 MET A 43 49.47 -107.44 REMARK 500 3 SER B 27 -70.06 -98.05 REMARK 500 3 ASP B 46 81.39 56.46 REMARK 500 3 THR A 22 -6.47 65.01 REMARK 500 3 SER A 27 -68.67 -98.12 REMARK 500 3 MET A 43 52.90 -91.14 REMARK 500 3 ASP A 46 177.34 64.21 REMARK 500 4 THR A 22 14.00 57.21 REMARK 500 4 ASP A 45 95.26 -163.64 REMARK 500 4 ASP A 46 81.22 67.14 REMARK 500 5 MET B 43 47.66 -100.58 REMARK 500 5 ASP B 46 69.36 61.68 REMARK 500 5 THR A 22 -0.39 64.97 REMARK 500 5 MET A 43 47.19 -89.85 REMARK 500 5 ASP A 46 -157.18 66.55 REMARK 500 6 ILE B 4 -165.15 -124.76 REMARK 500 6 LYS B 23 -83.73 -62.29 REMARK 500 6 SER A 5 -158.44 -104.47 REMARK 500 6 LYS A 23 -68.07 -129.30 REMARK 500 6 ASP A 45 105.14 -170.97 REMARK 500 6 ASP A 46 81.95 56.27 REMARK 500 7 SER B 27 -69.25 -98.49 REMARK 500 7 ASP B 46 -47.30 74.20 REMARK 500 7 SER A 27 -65.29 -98.97 REMARK 500 7 ASP A 45 41.55 -108.15 REMARK 500 8 THR B 22 14.17 54.54 REMARK 500 8 MET B 43 32.95 -141.59 REMARK 500 8 THR A 22 -1.21 61.26 REMARK 500 8 MET A 43 55.73 -112.41 REMARK 500 8 ASP A 46 81.76 59.62 REMARK 500 9 SER B 44 35.37 -86.70 REMARK 500 9 ASP B 45 -73.28 72.21 REMARK 500 9 SER A 44 46.42 -84.19 REMARK 500 9 ASP A 45 47.68 -79.55 REMARK 500 10 LYS B 23 -72.23 -57.38 REMARK 500 10 LYS A 23 -66.76 -128.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19714 RELATED DB: BMRB REMARK 900 RELATED ID: 2MN7 RELATED DB: PDB DBREF 2MN6 B 1 89 UNP P69428 TATA_ECOLI 1 89 DBREF 2MN6 A 1 89 UNP P69428 TATA_ECOLI 1 89 SEQADV 2MN6 MET B -2 UNP P69428 EXPRESSION TAG SEQADV 2MN6 CYS B -1 UNP P69428 EXPRESSION TAG SEQADV 2MN6 GLY B 0 UNP P69428 EXPRESSION TAG SEQADV 2MN6 LEU B 90 UNP P69428 EXPRESSION TAG SEQADV 2MN6 GLU B 91 UNP P69428 EXPRESSION TAG SEQADV 2MN6 HIS B 92 UNP P69428 EXPRESSION TAG SEQADV 2MN6 HIS B 93 UNP P69428 EXPRESSION TAG SEQADV 2MN6 HIS B 94 UNP P69428 EXPRESSION TAG SEQADV 2MN6 HIS B 95 UNP P69428 EXPRESSION TAG SEQADV 2MN6 HIS B 96 UNP P69428 EXPRESSION TAG SEQADV 2MN6 HIS B 97 UNP P69428 EXPRESSION TAG SEQADV 2MN6 MET A -2 UNP P69428 EXPRESSION TAG SEQADV 2MN6 CYS A -1 UNP P69428 EXPRESSION TAG SEQADV 2MN6 GLY A 0 UNP P69428 EXPRESSION TAG SEQADV 2MN6 LEU A 90 UNP P69428 EXPRESSION TAG SEQADV 2MN6 GLU A 91 UNP P69428 EXPRESSION TAG SEQADV 2MN6 HIS A 92 UNP P69428 EXPRESSION TAG SEQADV 2MN6 HIS A 93 UNP P69428 EXPRESSION TAG SEQADV 2MN6 HIS A 94 UNP P69428 EXPRESSION TAG SEQADV 2MN6 HIS A 95 UNP P69428 EXPRESSION TAG SEQADV 2MN6 HIS A 96 UNP P69428 EXPRESSION TAG SEQADV 2MN6 HIS A 97 UNP P69428 EXPRESSION TAG SEQRES 1 B 100 MET CYS GLY MET GLY GLY ILE SER ILE TRP GLN LEU LEU SEQRES 2 B 100 ILE ILE ALA VAL ILE VAL VAL LEU LEU PHE GLY THR LYS SEQRES 3 B 100 LYS LEU GLY SER ILE GLY SER ASP LEU GLY ALA SER ILE SEQRES 4 B 100 LYS GLY PHE LYS LYS ALA MET SER ASP ASP GLU PRO LYS SEQRES 5 B 100 GLN ASP LYS THR SER GLN ASP ALA ASP PHE THR ALA LYS SEQRES 6 B 100 THR ILE ALA ASP LYS GLN ALA ASP THR ASN GLN GLU GLN SEQRES 7 B 100 ALA LYS THR GLU ASP ALA LYS ARG HIS ASP LYS GLU GLN SEQRES 8 B 100 VAL LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 A 100 MET CYS GLY MET GLY GLY ILE SER ILE TRP GLN LEU LEU SEQRES 2 A 100 ILE ILE ALA VAL ILE VAL VAL LEU LEU PHE GLY THR LYS SEQRES 3 A 100 LYS LEU GLY SER ILE GLY SER ASP LEU GLY ALA SER ILE SEQRES 4 A 100 LYS GLY PHE LYS LYS ALA MET SER ASP ASP GLU PRO LYS SEQRES 5 A 100 GLN ASP LYS THR SER GLN ASP ALA ASP PHE THR ALA LYS SEQRES 6 A 100 THR ILE ALA ASP LYS GLN ALA ASP THR ASN GLN GLU GLN SEQRES 7 A 100 ALA LYS THR GLU ASP ALA LYS ARG HIS ASP LYS GLU GLN SEQRES 8 A 100 VAL LEU GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 SER B 5 PHE B 20 1 16 HELIX 2 2 THR B 22 LYS B 40 1 19 HELIX 3 3 SER A 5 PHE A 20 1 16 HELIX 4 4 THR A 22 LYS A 40 1 19 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1