HEADER PROTEIN BINDING 16-APR-14 2MNW TITLE SOLUTION STRUCTURE OF THE P22S MUTANT OF N-TERMINAL CS DOMAIN OF HUMAN TITLE 2 SHQ1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN SHQ1 HOMOLOG; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CS DOMAIN (UNP RESIDUES 1-96); COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SHQ1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET41 EK/LIC KEYWDS DYSKERIN, CBF5, H/ACA, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.SINGH,Z.WANG,D.CASCIO,J.FEIGON REVDAT 3 14-JUN-23 2MNW 1 REMARK SEQADV REVDAT 2 25-FEB-15 2MNW 1 JRNL REVDAT 1 14-JAN-15 2MNW 0 JRNL AUTH M.SINGH,Z.WANG,D.CASCIO,J.FEIGON JRNL TITL STRUCTURE AND INTERACTIONS OF THE CS DOMAIN OF HUMAN H/ACA JRNL TITL 2 RNP ASSEMBLY PROTEIN SHQ1. JRNL REF J.MOL.BIOL. V. 427 807 2015 JRNL REFN ISSN 0022-2836 JRNL PMID 25553844 JRNL DOI 10.1016/J.JMB.2014.12.012 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR, X-PLOR NIH REMARK 3 AUTHORS : BRUKER BIOSPIN (XWINNMR), SCHWIETERS, KUSZEWSKI, REMARK 3 TJANDRA AND CLORE (X-PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MNW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000103840. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20 MM SODIUM PHOSPHATE, 100 MM REMARK 210 SODIUM CHLORIDE, 1 MM DTT, 0.5-1 REMARK 210 MM [U-15N] P22S MUTANT OF HUMAN REMARK 210 SHQ1 CS DOMAIN, 95% H2O/5% D2O; REMARK 210 20 MM SODIUM PHOSPHATE, 100 MM REMARK 210 SODIUM CHLORIDE, 1 MM DTT, 0.5-1 REMARK 210 MM [U-99% 13C; U-99% 15N] P22S REMARK 210 MUTANT OF HUMAN SHQ1 CS DOMAIN, REMARK 210 95% H2O/5% D2O; 20 MM SODIUM REMARK 210 PHOSPHATE, 100 MM SODIUM REMARK 210 CHLORIDE, 1 MM DTT, 0.5-1 MM [U- REMARK 210 99% 13C; U-99% 15N] P22S MUTANT REMARK 210 OF HUMAN SHQ1 CS DOMAIN, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D C(CO)NH; 3D REMARK 210 HNCO; 3D HNCA; 3D HNCACB; 3D REMARK 210 HN(CO)CA; 3D HCCH-TOCSY; 3D REMARK 210 HBHA(CO)NH; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-15N NOESY; 3D REMARK 210 1H-13C NOESY AROMATIC; 3D HNHA; REMARK 210 3D HCACO REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR, TOPSPIN, X-PLOR NIH, REMARK 210 NMRPIPE, SPARKY, NMRDRAW REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING A COMBINATION OF NOE REMARK 210 AND RESIDUAL DIPOLAR COUPLING DATA. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A -36 REMARK 465 SER A -35 REMARK 465 THR A -34 REMARK 465 ALA A -33 REMARK 465 ILE A -32 REMARK 465 GLY A -31 REMARK 465 MET A -30 REMARK 465 LYS A -29 REMARK 465 GLU A -28 REMARK 465 THR A -27 REMARK 465 ALA A -26 REMARK 465 ALA A -25 REMARK 465 ALA A -24 REMARK 465 LYS A -23 REMARK 465 PHE A -22 REMARK 465 GLU A -21 REMARK 465 ARG A -20 REMARK 465 GLN A -19 REMARK 465 HIS A -18 REMARK 465 MET A -17 REMARK 465 ASP A -16 REMARK 465 SER A -15 REMARK 465 PRO A -14 REMARK 465 ASP A -13 REMARK 465 LEU A -12 REMARK 465 GLY A -11 REMARK 465 THR A -10 REMARK 465 GLY A -9 REMARK 465 GLY A -8 REMARK 465 GLY A -7 REMARK 465 SER A -6 REMARK 465 GLY A -5 REMARK 465 ASP A -4 REMARK 465 ASP A -3 REMARK 465 ASP A -2 REMARK 465 ASP A -1 REMARK 465 LYS A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 12 -6.06 -56.68 REMARK 500 1 ALA A 24 91.19 -22.55 REMARK 500 1 SER A 36 25.40 -160.38 REMARK 500 1 LYS A 43 -175.63 47.02 REMARK 500 1 PRO A 44 -27.13 -37.00 REMARK 500 1 ASN A 58 6.68 -158.24 REMARK 500 1 GLU A 61 -156.63 31.55 REMARK 500 1 GLN A 62 119.07 -179.94 REMARK 500 1 LEU A 91 177.44 -45.25 REMARK 500 2 ALA A 24 122.53 -29.80 REMARK 500 2 SER A 36 26.47 -159.86 REMARK 500 2 LYS A 43 -64.73 -163.03 REMARK 500 2 ASN A 58 -41.19 -163.96 REMARK 500 2 SER A 60 31.43 -91.06 REMARK 500 3 ALA A 5 60.10 -111.01 REMARK 500 3 ALA A 24 118.27 -23.62 REMARK 500 3 ARG A 25 -69.44 -98.76 REMARK 500 3 SER A 36 26.07 -161.89 REMARK 500 3 LYS A 43 -163.34 44.92 REMARK 500 3 ASN A 58 -37.27 -165.21 REMARK 500 3 SER A 60 33.96 -96.98 REMARK 500 3 PRO A 81 153.54 -43.80 REMARK 500 4 ALA A 5 57.66 -94.10 REMARK 500 4 ALA A 24 86.77 -22.35 REMARK 500 4 ARG A 25 -72.10 -68.30 REMARK 500 4 LYS A 43 -169.62 44.48 REMARK 500 4 PRO A 44 -14.16 -47.11 REMARK 500 4 ASN A 58 -40.48 -154.44 REMARK 500 4 GLU A 61 -145.95 28.07 REMARK 500 4 LEU A 91 158.71 -42.79 REMARK 500 5 SER A 22 -57.24 -140.26 REMARK 500 5 ALA A 24 99.00 38.09 REMARK 500 5 SER A 36 -1.29 67.81 REMARK 500 5 LYS A 43 -89.74 91.76 REMARK 500 5 ASN A 58 -43.07 -167.58 REMARK 500 5 GLU A 61 -167.19 -72.38 REMARK 500 5 LEU A 91 178.34 -45.25 REMARK 500 6 ALA A 5 63.29 -102.97 REMARK 500 6 ALA A 24 108.37 -24.80 REMARK 500 6 LYS A 43 -164.31 122.46 REMARK 500 6 PRO A 44 -26.63 -37.33 REMARK 500 6 ASN A 58 -37.68 -167.54 REMARK 500 6 SER A 60 30.25 -97.71 REMARK 500 6 GLU A 61 -169.21 -79.00 REMARK 500 6 LEU A 91 174.91 -48.61 REMARK 500 7 ALA A 5 58.13 -90.06 REMARK 500 7 ALA A 24 89.21 -21.82 REMARK 500 7 ARG A 25 -76.05 -70.44 REMARK 500 7 VAL A 26 128.20 -39.94 REMARK 500 7 LYS A 43 -170.23 43.80 REMARK 500 REMARK 500 THIS ENTRY HAS 154 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4PBD RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N-TERMINAL CS DOMAIN OF HUMAN SHQ1 REMARK 900 RELATED ID: 4PCK RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE P22S MUTANT OF N-TERMINAL CS DOMAIN OF REMARK 900 HUMAN SHQ1 REMARK 900 RELATED ID: 19910 RELATED DB: BMRB DBREF 2MNW A 1 96 UNP Q6PI26 SHQ1_HUMAN 1 96 SEQADV 2MNW GLY A -36 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW SER A -35 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW THR A -34 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW ALA A -33 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW ILE A -32 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW GLY A -31 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW MET A -30 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW LYS A -29 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW GLU A -28 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW THR A -27 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW ALA A -26 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW ALA A -25 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW ALA A -24 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW LYS A -23 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW PHE A -22 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW GLU A -21 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW ARG A -20 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW GLN A -19 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW HIS A -18 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW MET A -17 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW ASP A -16 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW SER A -15 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW PRO A -14 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW ASP A -13 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW LEU A -12 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW GLY A -11 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW THR A -10 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW GLY A -9 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW GLY A -8 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW GLY A -7 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW SER A -6 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW GLY A -5 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW ASP A -4 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW ASP A -3 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW ASP A -2 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW ASP A -1 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW LYS A 0 UNP Q6PI26 EXPRESSION TAG SEQADV 2MNW SER A 22 UNP Q6PI26 PRO 22 ENGINEERED MUTATION SEQRES 1 A 133 GLY SER THR ALA ILE GLY MET LYS GLU THR ALA ALA ALA SEQRES 2 A 133 LYS PHE GLU ARG GLN HIS MET ASP SER PRO ASP LEU GLY SEQRES 3 A 133 THR GLY GLY GLY SER GLY ASP ASP ASP ASP LYS MET LEU SEQRES 4 A 133 THR PRO ALA PHE ASP LEU SER GLN ASP PRO ASP PHE LEU SEQRES 5 A 133 THR ILE ALA ILE ARG VAL SER TYR ALA ARG VAL SER GLU SEQRES 6 A 133 PHE ASP VAL TYR PHE GLU GLY SER ASP PHE LYS PHE TYR SEQRES 7 A 133 ALA LYS PRO TYR PHE LEU ARG LEU THR LEU PRO GLY ARG SEQRES 8 A 133 ILE VAL GLU ASN GLY SER GLU GLN GLY SER TYR ASP ALA SEQRES 9 A 133 ASP LYS GLY ILE PHE THR ILE ARG LEU PRO LYS GLU THR SEQRES 10 A 133 PRO GLY GLN HIS PHE GLU GLY LEU ASN MET LEU THR ALA SEQRES 11 A 133 LEU LEU ALA SHEET 1 A 4 ASP A 7 ASP A 11 0 SHEET 2 A 4 PHE A 14 ILE A 19 -1 O THR A 16 N SER A 9 SHEET 3 A 4 ILE A 71 PRO A 77 -1 O LEU A 76 N LEU A 15 SHEET 4 A 4 GLN A 62 ASP A 66 -1 N GLN A 62 O ARG A 75 SHEET 1 B 3 ASP A 30 GLU A 34 0 SHEET 2 B 3 ASP A 37 ALA A 42 -1 O LYS A 39 N TYR A 32 SHEET 3 B 3 TYR A 45 THR A 50 -1 O LEU A 49 N PHE A 38 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1