HEADER CELL ADHESION 25-APR-14 2MOG TITLE SOLUTION STRUCTURE OF THE TERMINAL IG-LIKE DOMAIN FROM LEPTOSPIRA TITLE 2 INTERROGANS LIGB COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACTERIAL IG-LIKE DOMAIN, GROUP 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: IG-LIKE DOMAIN 12 (UNP RESIDUES 1029-1123); COMPND 5 SYNONYM: LIGB; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEPTOSPIRA INTERROGANS; SOURCE 3 ORGANISM_TAXID: 173; SOURCE 4 GENE: LEP1GSC112_5106; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28-HIS-SUMO KEYWDS IMMUNOGLOBULIN-LIKE FOLD, SURFACE PROTEIN, CELL ADHESION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.P.PTAK,C.HSIEH,Y.LIN,A.S.MALTSEV,R.RAMAN,Y.SHARMA,R.E.OSWALD, AUTHOR 2 Y.CHANG REVDAT 3 14-JUN-23 2MOG 1 REMARK REVDAT 2 03-SEP-14 2MOG 1 JRNL REVDAT 1 13-AUG-14 2MOG 0 JRNL AUTH C.P.PTAK,C.L.HSIEH,Y.P.LIN,A.S.MALTSEV,R.RAMAN,Y.SHARMA, JRNL AUTH 2 R.E.OSWALD,Y.F.CHANG JRNL TITL NMR SOLUTION STRUCTURE OF THE TERMINAL IMMUNOGLOBULIN-LIKE JRNL TITL 2 DOMAIN FROM THE LEPTOSPIRA HOST-INTERACTING OUTER MEMBRANE JRNL TITL 3 PROTEIN, LIGB. JRNL REF BIOCHEMISTRY V. 53 5249 2014 JRNL REFN ISSN 0006-2960 JRNL PMID 25068811 JRNL DOI 10.1021/BI500669U REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR, XPLOR-NIH REMARK 3 AUTHORS : VARIAN (VNMR), SCHWIETERS, KUSZEWSKI, TJANDRA AND REMARK 3 CLORE (XPLOR-NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MOG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000103859. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 286 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 0.15 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-95% 13C; U-95% 15N] REMARK 210 LIGB, 137 MM SODIUM CHLORIDE, 10 REMARK 210 MM SODIUM PHOSPHATE, 2.7 MM REMARK 210 POTASSIUM CHLORIDE, 1.8 MM REMARK 210 POTASSIUM PHOSPHATE, 90% H2O/10% REMARK 210 D2O; 0.5 MM [U-95% 15N] LIGB, REMARK 210 137 MM SODIUM CHLORIDE, 10 MM REMARK 210 SODIUM PHOSPHATE, 2.7 MM REMARK 210 POTASSIUM CHLORIDE, 1.8 MM REMARK 210 POTASSIUM PHOSPHATE, 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HN(CO)CA; 3D REMARK 210 HNCACO; 3D HNCO; 3D CBCANH; 3D REMARK 210 HNCBCACO; 3D C(CO)NH; 3D H(CCO) REMARK 210 NH; 3D 1H-15N TOCSY; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY; 3D 1H- REMARK 210 13C NOESY AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H ALA A 27 HG1 THR A 40 1.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 12 167.46 -43.49 REMARK 500 1 ASN A 14 -174.12 -48.92 REMARK 500 1 THR A 20 59.92 -150.50 REMARK 500 1 ALA A 58 -178.28 -69.97 REMARK 500 1 ALA A 69 122.41 161.89 REMARK 500 1 ASN A 72 80.63 -154.17 REMARK 500 2 ALA A 3 175.15 51.62 REMARK 500 2 PRO A 12 155.67 -37.16 REMARK 500 2 ASN A 14 -98.42 -41.13 REMARK 500 2 THR A 19 -83.08 -37.47 REMARK 500 2 ALA A 58 -175.11 -67.64 REMARK 500 2 ALA A 69 128.99 169.52 REMARK 500 2 THR A 93 -68.89 -103.14 REMARK 500 3 PRO A 12 172.48 -43.87 REMARK 500 3 ASN A 14 -153.81 35.78 REMARK 500 3 THR A 19 113.07 -38.26 REMARK 500 3 THR A 20 61.97 39.68 REMARK 500 3 ALA A 69 119.06 175.55 REMARK 500 4 PRO A 12 163.09 -38.30 REMARK 500 4 ASN A 14 -115.87 28.47 REMARK 500 4 SER A 32 -9.74 -55.63 REMARK 500 4 ALA A 69 118.79 177.72 REMARK 500 5 PRO A 12 155.84 -37.31 REMARK 500 5 ASN A 14 -90.90 -48.56 REMARK 500 5 THR A 19 -83.14 -39.35 REMARK 500 5 ALA A 69 120.58 175.96 REMARK 500 6 PRO A 12 158.30 -36.39 REMARK 500 6 ASN A 14 -92.85 -37.81 REMARK 500 6 THR A 15 93.25 -160.25 REMARK 500 6 THR A 20 63.76 30.00 REMARK 500 6 ALA A 69 121.60 170.66 REMARK 500 6 THR A 93 -72.11 -44.13 REMARK 500 6 ASP A 94 -65.02 -139.49 REMARK 500 7 ALA A 2 -172.24 45.48 REMARK 500 7 PRO A 12 164.79 -37.27 REMARK 500 7 ASN A 14 -120.95 33.96 REMARK 500 7 THR A 20 -16.91 67.91 REMARK 500 7 ALA A 69 118.27 167.75 REMARK 500 8 ALA A 3 163.81 57.67 REMARK 500 8 PRO A 12 163.54 -35.15 REMARK 500 8 ASN A 14 -154.51 33.70 REMARK 500 8 THR A 20 55.18 -156.38 REMARK 500 8 SER A 32 -14.86 -49.92 REMARK 500 8 ALA A 69 149.28 169.52 REMARK 500 8 SER A 70 -175.86 -179.15 REMARK 500 9 PRO A 12 162.36 -36.21 REMARK 500 9 ASN A 14 -172.18 -48.01 REMARK 500 9 THR A 19 121.24 -39.22 REMARK 500 9 THR A 20 66.49 31.87 REMARK 500 9 ALA A 58 -177.03 -68.53 REMARK 500 REMARK 500 THIS ENTRY HAS 114 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19942 RELATED DB: BMRB DBREF 2MOG A 1 95 UNP M6R7K6 M6R7K6_LEPIR 1029 1123 SEQRES 1 A 95 SER ALA ALA THR LEU SER SER ILE SER ILE SER PRO ILE SEQRES 2 A 95 ASN THR ASN ILE ASN THR THR VAL SER LYS GLN PHE PHE SEQRES 3 A 95 ALA VAL GLY THR TYR SER ASP GLY THR LYS ALA ASP LEU SEQRES 4 A 95 THR SER SER VAL THR TRP SER SER SER ASN GLN SER GLN SEQRES 5 A 95 ALA LYS VAL SER ASN ALA SER GLU THR LYS GLY LEU VAL SEQRES 6 A 95 THR GLY ILE ALA SER GLY ASN PRO THR ILE ILE ALA THR SEQRES 7 A 95 TYR GLY SER VAL SER GLY ASN THR ILE LEU THR VAL ASN SEQRES 8 A 95 LYS THR ASP THR SHEET 1 A 3 LEU A 5 ILE A 10 0 SHEET 2 A 3 ALA A 27 TYR A 31 -1 O THR A 30 N SER A 6 SHEET 3 A 3 LYS A 36 ASP A 38 -1 O ALA A 37 N GLY A 29 SHEET 1 B 3 SER A 22 GLN A 24 0 SHEET 2 B 3 LEU A 64 GLY A 67 -1 O VAL A 65 N LYS A 23 SHEET 3 B 3 ALA A 53 VAL A 55 -1 N LYS A 54 O THR A 66 SHEET 1 C 3 THR A 44 SER A 47 0 SHEET 2 C 3 THR A 74 TYR A 79 -1 O ILE A 76 N SER A 46 SHEET 3 C 3 VAL A 82 ILE A 87 -1 O VAL A 82 N TYR A 79 CISPEP 1 PRO A 12 ILE A 13 1 1.29 CISPEP 2 PRO A 12 ILE A 13 2 1.81 CISPEP 3 PRO A 12 ILE A 13 3 0.28 CISPEP 4 PRO A 12 ILE A 13 4 0.18 CISPEP 5 PRO A 12 ILE A 13 5 0.76 CISPEP 6 PRO A 12 ILE A 13 6 0.02 CISPEP 7 PRO A 12 ILE A 13 7 -0.24 CISPEP 8 PRO A 12 ILE A 13 8 0.02 CISPEP 9 PRO A 12 ILE A 13 9 0.12 CISPEP 10 PRO A 12 ILE A 13 10 0.20 CISPEP 11 PRO A 12 ILE A 13 11 1.43 CISPEP 12 PRO A 12 ILE A 13 12 0.24 CISPEP 13 PRO A 12 ILE A 13 13 0.42 CISPEP 14 PRO A 12 ILE A 13 14 0.16 CISPEP 15 PRO A 12 ILE A 13 15 0.38 CISPEP 16 PRO A 12 ILE A 13 16 0.05 CISPEP 17 PRO A 12 ILE A 13 17 -0.13 CISPEP 18 PRO A 12 ILE A 13 18 0.42 CISPEP 19 PRO A 12 ILE A 13 19 0.17 CISPEP 20 PRO A 12 ILE A 13 20 1.49 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1