HEADER ISOMERASE 18-MAY-14 2MPH TITLE SOLUTION STRUCTURE OF HUMAN FK506 BINDING PROTEIN 25 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PPIASE FKBP3, 25 KDA FK506-BINDING PROTEIN, 25 KDA FKBP, COMPND 5 FKBP-25, FK506-BINDING PROTEIN 3, FKBP-3, IMMUNOPHILIN FKBP25, COMPND 6 RAPAMYCIN-SELECTIVE 25 KDA IMMUNOPHILIN, ROTAMASE; COMPND 7 EC: 5.2.1.8; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FKBP3, FKBP25; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PSUMO KEYWDS HFKBP25, ISOMERASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.SHIN,A.PRAKASH,H.YOON REVDAT 4 14-JUN-23 2MPH 1 REMARK REVDAT 3 19-OCT-22 2MPH 1 JRNL REVDAT 2 02-MAR-22 2MPH 1 JRNL REMARK REVDAT 1 20-MAY-15 2MPH 0 JRNL AUTH A.PRAKASH,J.SHIN,S.RAJAN,H.S.YOON JRNL TITL STRUCTURAL BASIS OF NUCLEIC ACID RECOGNITION BY JRNL TITL 2 FK506-BINDING PROTEIN 25 (FKBP25), A NUCLEAR IMMUNOPHILIN. JRNL REF NUCLEIC ACIDS RES. V. 44 2909 2016 JRNL REFN ESSN 1362-4962 JRNL PMID 26762975 JRNL DOI 10.1093/NAR/GKW001 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.PRAKASH,J.SHIN,H.S.YOON REMARK 1 TITL (1)H, (13)C AND (15)N RESONANCE ASSIGNMENTS OF HUMAN FK506 REMARK 1 TITL 2 BINDING PROTEIN 25 REMARK 1 REF BIOMOL.NMR ASSIGN. V. 9 43 2014 REMARK 1 REFN ISSN 1874-2718 REMARK 1 PMID 24414276 REMARK 1 DOI 10.1007/S12104-014-9541-7 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN, CNS REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), REMARK 3 BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE,JIANG,KUSZEWSKI, REMARK 3 NILGES, PANNU,READ,RICE,SIMONSON,WARREN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MPH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUN-14. REMARK 100 THE DEPOSITION ID IS D_1000103894. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 70 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-13C; U-15N] HUMAN REMARK 210 FK506 BINDING PROTEIN 25 REMARK 210 (HFKBP25)-1, 10 % [U-100% 2H] REMARK 210 D2O-2, 90 % H2O-3, 50 MM SODIUM REMARK 210 CHLORIDE-4, 20 MM SODIUM REMARK 210 PHOSPHATE-5, 0.001 % SODIUM REMARK 210 AZIDE-6, 90% H2O/10% D2O; 0.5 MM REMARK 210 [U-15N] HUMAN FK506 BINDING REMARK 210 PROTEIN 25 (HFKBP25)-7, 10 % [U- REMARK 210 100% 2H] D2O-8, 90 % H2O-9, 50 REMARK 210 MM SODIUM CHLORIDE-10, 20 MM REMARK 210 SODIUM PHOSPHATE-11, 0.001 % REMARK 210 SODIUM AZIDE-12, 90% H2O/10% D2O; REMARK 210 0.5 MM [U-13C] HUMAN FK506 REMARK 210 BINDING PROTEIN 25 (HFKBP25)-13, REMARK 210 100 % [U-100% 2H] D2O-14, 50 MM REMARK 210 SODIUM CHLORIDE-15, 20 MM SODIUM REMARK 210 PHOSPHATE-16, 0.001 % SODIUM REMARK 210 PHOSPHATE-17, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCA; 3D REMARK 210 HN(CO)CA; 3D HNCACB; 3D CBCA(CO) REMARK 210 NH; 3D HNCO; 3D HN(CA)CO; 3D REMARK 210 C(CO)NH; 3D H(CCO)NH; 3D HNHA; REMARK 210 3D HCCH-TOCSY; 3D 1H-13C NOESY; REMARK 210 3D 1H-15N NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, SPARKY REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 2 96.58 -175.05 REMARK 500 1 ALA A 3 76.00 -175.29 REMARK 500 1 SER A 17 173.95 -54.70 REMARK 500 1 ARG A 71 46.04 -107.34 REMARK 500 1 GLU A 76 -46.91 -145.18 REMARK 500 1 ILE A 78 -171.05 45.10 REMARK 500 1 VAL A 88 90.99 63.85 REMARK 500 1 LYS A 89 -41.74 -173.66 REMARK 500 1 LEU A 90 100.40 56.84 REMARK 500 1 GLU A 92 145.03 62.65 REMARK 500 1 LYS A 96 -168.22 56.81 REMARK 500 1 GLU A 97 169.07 61.03 REMARK 500 1 THR A 98 34.05 -163.63 REMARK 500 1 LYS A 99 -79.67 64.51 REMARK 500 1 GLU A 102 92.70 -176.65 REMARK 500 1 PRO A 109 -160.64 -57.15 REMARK 500 1 LYS A 110 37.70 -97.20 REMARK 500 1 THR A 122 -44.76 -154.27 REMARK 500 1 LEU A 139 -178.32 -60.93 REMARK 500 1 ASP A 146 113.37 -161.89 REMARK 500 1 LYS A 156 125.48 -173.13 REMARK 500 1 LYS A 157 94.49 -59.86 REMARK 500 1 ASN A 158 42.72 -165.65 REMARK 500 1 ALA A 197 -83.46 -145.97 REMARK 500 2 ALA A 4 96.75 59.33 REMARK 500 2 ARG A 8 98.58 -48.63 REMARK 500 2 SER A 17 176.97 -59.08 REMARK 500 2 LEU A 44 170.34 -48.75 REMARK 500 2 ARG A 71 46.18 -92.52 REMARK 500 2 THR A 75 107.38 57.92 REMARK 500 2 GLU A 76 -39.98 -176.01 REMARK 500 2 ILE A 78 -42.55 -159.02 REMARK 500 2 SER A 79 111.06 60.57 REMARK 500 2 VAL A 81 52.36 -92.24 REMARK 500 2 GLN A 84 99.04 59.32 REMARK 500 2 VAL A 85 88.41 59.28 REMARK 500 2 LYS A 89 -40.12 -175.74 REMARK 500 2 PRO A 95 -172.82 -53.52 REMARK 500 2 LYS A 96 -39.58 -177.29 REMARK 500 2 SER A 100 -80.56 62.76 REMARK 500 2 PRO A 109 -176.10 -52.34 REMARK 500 2 LYS A 121 35.84 71.22 REMARK 500 2 THR A 122 -43.81 -152.98 REMARK 500 2 GLN A 150 -67.68 -123.80 REMARK 500 2 LYS A 156 -179.18 -177.64 REMARK 500 2 LYS A 157 31.41 -99.05 REMARK 500 2 TRP A 196 36.84 -96.64 REMARK 500 2 ALA A 197 -76.98 -162.83 REMARK 500 2 TYR A 198 -71.21 -106.27 REMARK 500 2 GLN A 203 79.62 -153.99 REMARK 500 REMARK 500 THIS ENTRY HAS 467 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19551 RELATED DB: BMRB DBREF 2MPH A 1 224 UNP Q00688 FKBP3_HUMAN 1 224 SEQRES 1 A 224 MET ALA ALA ALA VAL PRO GLN ARG ALA TRP THR VAL GLU SEQRES 2 A 224 GLN LEU ARG SER GLU GLN LEU PRO LYS LYS ASP ILE ILE SEQRES 3 A 224 LYS PHE LEU GLN GLU HIS GLY SER ASP SER PHE LEU ALA SEQRES 4 A 224 GLU HIS LYS LEU LEU GLY ASN ILE LYS ASN VAL ALA LYS SEQRES 5 A 224 THR ALA ASN LYS ASP HIS LEU VAL THR ALA TYR ASN HIS SEQRES 6 A 224 LEU PHE GLU THR LYS ARG PHE LYS GLY THR GLU SER ILE SEQRES 7 A 224 SER LYS VAL SER GLU GLN VAL LYS ASN VAL LYS LEU ASN SEQRES 8 A 224 GLU ASP LYS PRO LYS GLU THR LYS SER GLU GLU THR LEU SEQRES 9 A 224 ASP GLU GLY PRO PRO LYS TYR THR LYS SER VAL LEU LYS SEQRES 10 A 224 LYS GLY ASP LYS THR ASN PHE PRO LYS LYS GLY ASP VAL SEQRES 11 A 224 VAL HIS CYS TRP TYR THR GLY THR LEU GLN ASP GLY THR SEQRES 12 A 224 VAL PHE ASP THR ASN ILE GLN THR SER ALA LYS LYS LYS SEQRES 13 A 224 LYS ASN ALA LYS PRO LEU SER PHE LYS VAL GLY VAL GLY SEQRES 14 A 224 LYS VAL ILE ARG GLY TRP ASP GLU ALA LEU LEU THR MET SEQRES 15 A 224 SER LYS GLY GLU LYS ALA ARG LEU GLU ILE GLU PRO GLU SEQRES 16 A 224 TRP ALA TYR GLY LYS LYS GLY GLN PRO ASP ALA LYS ILE SEQRES 17 A 224 PRO PRO ASN ALA LYS LEU THR PHE GLU VAL GLU LEU VAL SEQRES 18 A 224 ASP ILE ASP HELIX 1 1 THR A 11 ARG A 16 1 6 HELIX 2 2 PRO A 21 GLY A 33 1 13 HELIX 3 3 SER A 34 HIS A 41 1 8 HELIX 4 4 ASN A 46 ALA A 54 1 9 HELIX 5 5 ASN A 55 THR A 69 1 15 HELIX 6 6 ILE A 172 LEU A 180 1 9 HELIX 7 7 PRO A 194 ALA A 197 5 4 HELIX 8 8 GLN A 203 LYS A 207 5 5 SHEET 1 A 5 TYR A 111 LYS A 117 0 SHEET 2 A 5 LYS A 187 ILE A 192 -1 O GLU A 191 N THR A 112 SHEET 3 A 5 LEU A 214 ASP A 222 -1 O LEU A 214 N ILE A 192 SHEET 4 A 5 HIS A 132 THR A 138 -1 N HIS A 132 O VAL A 221 SHEET 5 A 5 VAL A 144 THR A 147 -1 O ASP A 146 N GLY A 137 SHEET 1 B 5 TYR A 111 LYS A 117 0 SHEET 2 B 5 LYS A 187 ILE A 192 -1 O GLU A 191 N THR A 112 SHEET 3 B 5 LEU A 214 ASP A 222 -1 O LEU A 214 N ILE A 192 SHEET 4 B 5 HIS A 132 THR A 138 -1 N HIS A 132 O VAL A 221 SHEET 5 B 5 LEU A 162 SER A 163 -1 O LEU A 162 N CYS A 133 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1