HEADER UBIQUITIN-BINDING PROTEIN 14-JUL-14 2MRP TITLE NMR SOLUTION STRUCTURE OF THE UBIQUITIN LIKE DOMAIN (UBL) OF DNA- TITLE 2 DAMAGE-INDUCIBLE 1 PROTEIN (DDI1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA DAMAGE-INDUCIBLE PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UBIQUITIN LIKE DOMAIN OF DNA-DAMAGE-INDUCIBLE 1 PROTEIN COMPND 5 (DDI1UBL); COMPND 6 SYNONYM: V-SNARE-MASTER 1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: DDI1, VSM1, YER143W; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: M15; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PQE30 KEYWDS DNA-DAMAGE-INDUCIBLE 1 PROTEIN, DDI1, UBIQUITIN LIKE DOMAIN, UBL, KEYWDS 2 UBIQUITIN BINDING, UBIQUITIN-BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR U.NOWICKA,D.FUSHMAN,T.CHEN REVDAT 3 01-MAY-24 2MRP 1 REMARK SEQADV REVDAT 2 18-MAR-15 2MRP 1 JRNL REVDAT 1 11-MAR-15 2MRP 0 JRNL AUTH U.NOWICKA,D.ZHANG,O.WALKER,D.KRUTAUZ,C.A.CASTANEDA, JRNL AUTH 2 A.CHATURVEDI,T.Y.CHEN,N.REIS,M.H.GLICKMAN,D.FUSHMAN JRNL TITL DNA-DAMAGE-INDUCIBLE 1 PROTEIN (DDI1) CONTAINS AN JRNL TITL 2 UNCHARACTERISTIC UBIQUITIN-LIKE DOMAIN THAT BINDS UBIQUITIN. JRNL REF STRUCTURE V. 23 542 2015 JRNL REFN ISSN 0969-2126 JRNL PMID 25703377 JRNL DOI 10.1016/J.STR.2015.01.010 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CARA 1.8.1, ARIA 2.1 REMARK 3 AUTHORS : KELLER AND WUTHRICH (CARA), LINGE, O'DONOGHUE AND REMARK 3 NILGES (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MRP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000103972. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 295.5; 315 REMARK 210 PH : 6.8; 6.8 REMARK 210 IONIC STRENGTH : 10; 10 REMARK 210 PRESSURE : AMBIENT ATM; AMBIENT ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 15N] DDI1UBL, 5 % REMARK 210 [U-99% 2H] D2O, 95 % H2O, 20 MM REMARK 210 SODIUM PHOSPHATE, 3 MM TCEP, 95% REMARK 210 H2O/5% D2O; 1 MM [U-100% 13C; U- REMARK 210 100% 15N] DDI1UBL, 5 % [U-99% 2H] REMARK 210 D2O, 95 % H2O, 20 MM SODIUM REMARK 210 PHOSPHATE, 3 MM TCEP, 95% H2O/5% REMARK 210 D2O; 1 MM [U-100% 15N] DDI1UBL, REMARK 210 5 % [U-99% 2H] D2O, 45 % H2O, 10 REMARK 210 MM SODIUM PHOSPHATE, 3 MM TCEP, REMARK 210 5 % C12E5, 45 % N-HEXANOL, 95% REMARK 210 H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-1H TOCSY; REMARK 210 2D 1H-1H NOESY; 3D H(CCO)NH; 3D REMARK 210 1H-13C NOESY; 3D HNCO; 3D HN(CA) REMARK 210 CO; 3D HN(CO)CA; 3D HNCA; 3D REMARK 210 CBCA(CO)NH; 3D HNCACB; 3D C(CO) REMARK 210 NH; RDC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CARA 1.8.1, TOPSPIN 2.1, ARIA REMARK 210 2.1, TALOS TALOS+ REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 10 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 MET A -10 REMARK 465 ARG A -9 REMARK 465 GLY A -8 REMARK 465 SER A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 LYS A 81 REMARK 465 LEU A 82 REMARK 465 ASN A 83 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H ASP A 39 HD1 HIS A 43 1.09 REMARK 500 HB3 MET A 23 HD12 LEU A 60 1.23 REMARK 500 HA LEU A 60 HD11 LEU A 65 1.27 REMARK 500 O SER A 59 H LEU A 63 1.58 REMARK 500 OD2 ASP A 39 HG1 THR A 41 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 1 TYR A 14 CG TYR A 14 CD2 -0.082 REMARK 500 1 TYR A 14 CE2 TYR A 14 CD2 -0.091 REMARK 500 1 TYR A 46 CG TYR A 46 CD1 -0.103 REMARK 500 1 TYR A 47 CB TYR A 47 CG -0.100 REMARK 500 1 TYR A 47 CD1 TYR A 47 CE1 -0.098 REMARK 500 2 TYR A 14 CG TYR A 14 CD2 -0.079 REMARK 500 2 TYR A 46 CG TYR A 46 CD1 -0.101 REMARK 500 2 TYR A 47 CB TYR A 47 CG -0.103 REMARK 500 2 TYR A 47 CD1 TYR A 47 CE1 -0.096 REMARK 500 3 TYR A 14 CG TYR A 14 CD2 -0.082 REMARK 500 3 TYR A 14 CE2 TYR A 14 CD2 -0.095 REMARK 500 3 TYR A 47 CB TYR A 47 CG -0.107 REMARK 500 3 TYR A 47 CG TYR A 47 CD1 -0.085 REMARK 500 3 TYR A 47 CD1 TYR A 47 CE1 -0.095 REMARK 500 4 TYR A 46 CG TYR A 46 CD1 -0.098 REMARK 500 4 TYR A 47 CB TYR A 47 CG -0.094 REMARK 500 4 TYR A 47 CD1 TYR A 47 CE1 -0.099 REMARK 500 5 TYR A 14 CG TYR A 14 CD2 -0.083 REMARK 500 5 TYR A 46 CG TYR A 46 CD1 -0.102 REMARK 500 5 TYR A 47 CB TYR A 47 CG -0.103 REMARK 500 5 TYR A 47 CD1 TYR A 47 CE1 -0.097 REMARK 500 6 TYR A 14 CG TYR A 14 CD2 -0.084 REMARK 500 6 TYR A 14 CE2 TYR A 14 CD2 -0.095 REMARK 500 6 TYR A 46 CG TYR A 46 CD1 -0.104 REMARK 500 6 TYR A 47 CB TYR A 47 CG -0.097 REMARK 500 6 TYR A 47 CD1 TYR A 47 CE1 -0.100 REMARK 500 7 TYR A 46 CG TYR A 46 CD1 -0.083 REMARK 500 7 TYR A 47 CB TYR A 47 CG -0.108 REMARK 500 7 TYR A 47 CD1 TYR A 47 CE1 -0.094 REMARK 500 8 TYR A 46 CG TYR A 46 CD1 -0.105 REMARK 500 8 TYR A 47 CB TYR A 47 CG -0.107 REMARK 500 8 TYR A 47 CG TYR A 47 CD1 -0.080 REMARK 500 8 TYR A 47 CD1 TYR A 47 CE1 -0.095 REMARK 500 9 TYR A 14 CG TYR A 14 CD2 -0.080 REMARK 500 9 TYR A 46 CG TYR A 46 CD1 -0.096 REMARK 500 9 TYR A 47 CB TYR A 47 CG -0.103 REMARK 500 9 TYR A 47 CD1 TYR A 47 CE1 -0.099 REMARK 500 10 TYR A 14 CG TYR A 14 CD2 -0.087 REMARK 500 10 TYR A 14 CE2 TYR A 14 CD2 -0.095 REMARK 500 10 TYR A 46 CG TYR A 46 CD1 -0.098 REMARK 500 10 TYR A 47 CB TYR A 47 CG -0.103 REMARK 500 10 TYR A 47 CG TYR A 47 CD1 -0.079 REMARK 500 10 TYR A 47 CD1 TYR A 47 CE1 -0.097 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 TYR A 14 CB - CG - CD2 ANGL. DEV. = -4.8 DEGREES REMARK 500 1 TYR A 46 CB - CG - CD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 1 TYR A 46 CB - CG - CD1 ANGL. DEV. = -8.8 DEGREES REMARK 500 1 TYR A 47 CB - CG - CD2 ANGL. DEV. = 5.0 DEGREES REMARK 500 1 TYR A 47 CB - CG - CD1 ANGL. DEV. = -8.2 DEGREES REMARK 500 2 TYR A 14 CB - CG - CD2 ANGL. DEV. = -4.6 DEGREES REMARK 500 2 TYR A 46 CB - CG - CD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 2 TYR A 46 CB - CG - CD1 ANGL. DEV. = -9.0 DEGREES REMARK 500 2 TYR A 47 CB - CG - CD2 ANGL. DEV. = 5.0 DEGREES REMARK 500 2 TYR A 47 CB - CG - CD1 ANGL. DEV. = -8.4 DEGREES REMARK 500 3 TYR A 14 CB - CG - CD2 ANGL. DEV. = -5.3 DEGREES REMARK 500 3 TYR A 46 CB - CG - CD1 ANGL. DEV. = -5.3 DEGREES REMARK 500 3 TYR A 47 CB - CG - CD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 3 TYR A 47 CB - CG - CD1 ANGL. DEV. = -9.2 DEGREES REMARK 500 4 TYR A 14 CB - CG - CD2 ANGL. DEV. = -4.2 DEGREES REMARK 500 4 TYR A 46 CB - CG - CD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 4 TYR A 46 CB - CG - CD1 ANGL. DEV. = -9.2 DEGREES REMARK 500 4 TYR A 47 CB - CG - CD2 ANGL. DEV. = 5.2 DEGREES REMARK 500 4 TYR A 47 CB - CG - CD1 ANGL. DEV. = -8.3 DEGREES REMARK 500 5 TYR A 14 CB - CG - CD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 5 TYR A 46 CB - CG - CD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 5 TYR A 46 CB - CG - CD1 ANGL. DEV. = -9.4 DEGREES REMARK 500 5 TYR A 47 CB - CG - CD2 ANGL. DEV. = 5.3 DEGREES REMARK 500 5 TYR A 47 CB - CG - CD1 ANGL. DEV. = -8.6 DEGREES REMARK 500 6 TYR A 14 CB - CG - CD2 ANGL. DEV. = -5.2 DEGREES REMARK 500 6 TYR A 46 CB - CG - CD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 6 TYR A 46 CB - CG - CD1 ANGL. DEV. = -8.6 DEGREES REMARK 500 6 TYR A 47 CB - CG - CD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 6 TYR A 47 CB - CG - CD1 ANGL. DEV. = -8.5 DEGREES REMARK 500 7 TYR A 14 CB - CG - CD2 ANGL. DEV. = -5.0 DEGREES REMARK 500 7 TYR A 46 CB - CG - CD1 ANGL. DEV. = -5.0 DEGREES REMARK 500 7 TYR A 47 CB - CG - CD2 ANGL. DEV. = 4.8 DEGREES REMARK 500 7 TYR A 47 CB - CG - CD1 ANGL. DEV. = -8.2 DEGREES REMARK 500 8 TYR A 14 CB - CG - CD2 ANGL. DEV. = -5.2 DEGREES REMARK 500 8 TYR A 46 CB - CG - CD2 ANGL. DEV. = 5.0 DEGREES REMARK 500 8 TYR A 46 CB - CG - CD1 ANGL. DEV. = -6.7 DEGREES REMARK 500 8 TYR A 47 CB - CG - CD2 ANGL. DEV. = 5.3 DEGREES REMARK 500 8 TYR A 47 CB - CG - CD1 ANGL. DEV. = -8.7 DEGREES REMARK 500 9 TYR A 14 CB - CG - CD2 ANGL. DEV. = -5.1 DEGREES REMARK 500 9 TYR A 46 CB - CG - CD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 9 TYR A 46 CB - CG - CD1 ANGL. DEV. = -7.8 DEGREES REMARK 500 9 TYR A 47 CB - CG - CD2 ANGL. DEV. = 5.0 DEGREES REMARK 500 9 TYR A 47 CB - CG - CD1 ANGL. DEV. = -8.2 DEGREES REMARK 500 10 TYR A 14 CB - CG - CD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 10 TYR A 46 CB - CG - CD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 10 TYR A 46 CB - CG - CD1 ANGL. DEV. = -8.4 DEGREES REMARK 500 10 TYR A 47 CB - CG - CD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 10 TYR A 47 CB - CG - CD1 ANGL. DEV. = -8.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 16 97.43 -55.70 REMARK 500 1 LYS A 42 83.97 -161.98 REMARK 500 1 ASN A 48 -78.52 66.43 REMARK 500 1 ARG A 56 47.72 -82.30 REMARK 500 1 SER A 59 -176.77 -69.21 REMARK 500 1 LYS A 66 -156.46 -177.48 REMARK 500 1 LYS A 76 -162.29 66.18 REMARK 500 1 ILE A 77 -72.77 -57.75 REMARK 500 1 ASN A 79 -48.25 166.65 REMARK 500 2 ASP A 39 86.84 -152.93 REMARK 500 2 LYS A 42 81.31 -158.39 REMARK 500 2 ASN A 48 -75.78 62.26 REMARK 500 2 ARG A 56 36.99 -90.50 REMARK 500 2 SER A 59 -178.90 -66.97 REMARK 500 2 LYS A 66 -163.90 -175.97 REMARK 500 2 SER A 78 -39.91 -137.72 REMARK 500 3 ASP A 39 77.22 -152.77 REMARK 500 3 LYS A 42 79.36 -165.76 REMARK 500 3 ASN A 48 -83.13 59.45 REMARK 500 3 MET A 49 51.16 -113.84 REMARK 500 3 ASP A 50 -167.62 77.61 REMARK 500 3 ARG A 56 47.27 -80.70 REMARK 500 3 LYS A 66 -159.44 -172.72 REMARK 500 3 LYS A 76 30.13 26.57 REMARK 500 4 PRO A 16 98.56 -56.97 REMARK 500 4 ASP A 39 86.70 -153.09 REMARK 500 4 LYS A 42 88.46 -157.80 REMARK 500 4 ASN A 48 -79.68 69.80 REMARK 500 4 LEU A 52 -174.04 -54.69 REMARK 500 4 ARG A 56 44.97 20.24 REMARK 500 4 LYS A 66 -157.43 -171.83 REMARK 500 4 ARG A 74 -168.37 -125.78 REMARK 500 4 LYS A 76 -163.37 -67.36 REMARK 500 5 LYS A 42 92.18 -164.43 REMARK 500 5 ASN A 48 -77.91 67.17 REMARK 500 5 ARG A 56 47.45 -94.31 REMARK 500 5 THR A 57 37.56 -77.83 REMARK 500 5 LYS A 66 -167.04 168.10 REMARK 500 5 LYS A 76 -171.22 79.70 REMARK 500 5 ILE A 77 -75.54 -49.14 REMARK 500 6 LYS A 42 91.42 -160.89 REMARK 500 6 ASN A 48 -77.82 66.21 REMARK 500 6 ARG A 56 39.96 -96.18 REMARK 500 6 LYS A 66 -156.12 -179.73 REMARK 500 6 LYS A 76 -155.13 58.76 REMARK 500 6 ASN A 79 113.00 -173.22 REMARK 500 7 PRO A 16 101.39 -43.94 REMARK 500 7 LYS A 42 90.58 -164.49 REMARK 500 7 ASN A 48 -85.55 44.24 REMARK 500 7 MET A 49 34.70 -97.60 REMARK 500 REMARK 500 THIS ENTRY HAS 84 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 3 ARG A 74 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25088 RELATED DB: BMRB DBREF 2MRP A 2 80 UNP P40087 DDI1_YEAST 2 80 SEQADV 2MRP MET A -10 UNP P40087 EXPRESSION TAG SEQADV 2MRP ARG A -9 UNP P40087 EXPRESSION TAG SEQADV 2MRP GLY A -8 UNP P40087 EXPRESSION TAG SEQADV 2MRP SER A -7 UNP P40087 EXPRESSION TAG SEQADV 2MRP HIS A -6 UNP P40087 EXPRESSION TAG SEQADV 2MRP HIS A -5 UNP P40087 EXPRESSION TAG SEQADV 2MRP HIS A -4 UNP P40087 EXPRESSION TAG SEQADV 2MRP HIS A -3 UNP P40087 EXPRESSION TAG SEQADV 2MRP HIS A -2 UNP P40087 EXPRESSION TAG SEQADV 2MRP HIS A -1 UNP P40087 EXPRESSION TAG SEQADV 2MRP GLY A 0 UNP P40087 EXPRESSION TAG SEQADV 2MRP SER A 1 UNP P40087 EXPRESSION TAG SEQADV 2MRP LYS A 81 UNP P40087 EXPRESSION TAG SEQADV 2MRP LEU A 82 UNP P40087 EXPRESSION TAG SEQADV 2MRP ASN A 83 UNP P40087 EXPRESSION TAG SEQRES 1 A 94 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER ASP SEQRES 2 A 94 LEU THR ILE SER ASN GLU LEU THR GLY GLU ILE TYR GLY SEQRES 3 A 94 PRO ILE GLU VAL SER GLU ASP MET ALA LEU THR ASP LEU SEQRES 4 A 94 ILE ALA LEU LEU GLN ALA ASP CYS GLY PHE ASP LYS THR SEQRES 5 A 94 LYS HIS ASP LEU TYR TYR ASN MET ASP ILE LEU ASP SER SEQRES 6 A 94 ASN ARG THR GLN SER LEU LYS GLU LEU GLY LEU LYS THR SEQRES 7 A 94 ASP ASP LEU LEU LEU ILE ARG GLY LYS ILE SER ASN SER SEQRES 8 A 94 LYS LEU ASN HELIX 1 1 LEU A 25 ALA A 34 1 10 HELIX 2 2 LYS A 40 LYS A 42 5 3 HELIX 3 3 LEU A 60 LEU A 63 1 4 SHEET 1 A 5 GLU A 12 PRO A 16 0 SHEET 2 A 5 LEU A 3 ASN A 7 -1 SHEET 3 A 5 LEU A 70 ARG A 74 1 O ILE A 73 N SER A 6 SHEET 4 A 5 ASP A 44 TYR A 47 -1 N ASP A 44 O ARG A 74 SHEET 5 A 5 ASP A 50 ILE A 51 -1 O ASP A 50 N TYR A 47 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1