data_2MSG # _entry.id 2MSG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2MSG pdb_00002msg 10.2210/pdb2msg/pdb RCSB RCSB103996 ? ? BMRB 25123 ? ? WWPDB D_1000103996 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 3ONS PDB . unspecified 1D3Z PDB . unspecified 25123 BMRB . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MSG _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-08-04 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lakomek, N.' 1 'Habenstein, B.' 2 'Loquet, A.' 3 'Shi, C.' 4 'Giller, K.' 5 'Wolff, S.' 6 'Becker, S.' 7 'Fasshuber, H.' 8 'Lange, A.' 9 # _citation.id primary _citation.title 'Structural heterogeneity in microcrystalline ubiquitin studied by solid-state NMR.' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 24 _citation.page_first 592 _citation.page_last 598 _citation.year 2015 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25644665 _citation.pdbx_database_id_DOI 10.1002/pro.2654 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fasshuber, H.K.' 1 ? primary 'Lakomek, N.A.' 2 ? primary 'Habenstein, B.' 3 ? primary 'Loquet, A.' 4 ? primary 'Shi, C.' 5 ? primary 'Giller, K.' 6 ? primary 'Wolff, S.' 7 ? primary 'Becker, S.' 8 ? primary 'Lange, A.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Ubiquitin _entity.formula_weight 8192.375 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'UNP residuse 1-72' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR _entity_poly.pdbx_seq_one_letter_code_can MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLN n 1 3 ILE n 1 4 PHE n 1 5 VAL n 1 6 LYS n 1 7 THR n 1 8 LEU n 1 9 THR n 1 10 GLY n 1 11 LYS n 1 12 THR n 1 13 ILE n 1 14 THR n 1 15 LEU n 1 16 GLU n 1 17 VAL n 1 18 GLU n 1 19 PRO n 1 20 SER n 1 21 ASP n 1 22 THR n 1 23 ILE n 1 24 GLU n 1 25 ASN n 1 26 VAL n 1 27 LYS n 1 28 ALA n 1 29 LYS n 1 30 ILE n 1 31 GLN n 1 32 ASP n 1 33 LYS n 1 34 GLU n 1 35 GLY n 1 36 ILE n 1 37 PRO n 1 38 PRO n 1 39 ASP n 1 40 GLN n 1 41 GLN n 1 42 ARG n 1 43 LEU n 1 44 ILE n 1 45 PHE n 1 46 ALA n 1 47 GLY n 1 48 LYS n 1 49 GLN n 1 50 LEU n 1 51 GLU n 1 52 ASP n 1 53 GLY n 1 54 ARG n 1 55 THR n 1 56 LEU n 1 57 SER n 1 58 ASP n 1 59 TYR n 1 60 ASN n 1 61 ILE n 1 62 GLN n 1 63 LYS n 1 64 GLU n 1 65 SER n 1 66 THR n 1 67 LEU n 1 68 HIS n 1 69 LEU n 1 70 VAL n 1 71 LEU n 1 72 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details UBB _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pET32a _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code UBB_HUMAN _struct_ref.pdbx_db_accession P0CG47 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR _struct_ref.pdbx_align_begin 7 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2MSG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 72 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0CG47 _struct_ref_seq.db_align_beg 7 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 78 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 72 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 PDSD 1 2 1 PDSD 1 3 1 NCA 1 4 1 NCO 1 5 1 INEPT 1 6 1 NCACX 1 7 1 NCOCX 1 8 1 PDSD 1 9 1 PDSD 1 10 1 PDSD 1 11 1 NCA 1 12 1 PDSD 1 13 1 PDSD 1 14 1 PDSD 1 15 1 NCA # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH ? _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 273 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents ;20 mg [U-100% 13C; U-100% 15N] Ubiquitin, 30 mg [1-glucose 13C,U-100% 15N] Ubiquitin, 40 mg [2-glucose 13C,U-100% 15N] Ubiquitin, 40 % v/v MPD, 0.2 M CdCl2, 1 mg DSS, 100% H20 ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '100% H20' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 800 Bruker AVANCE 1 'Bruker Avance' 850 Bruker AVANCE 2 'Bruker Avance' 600 Bruker AVANCE 3 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2MSG _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 2MSG _pdbx_nmr_details.text ;three different labeled samples Ubiquitin-unif [13C-15N] uniformly labeled Ubiquitin-1glc [13C-15N]-1glucose labeled Ubiquitin-2glu [13C-15N]-2glucose labeled ; # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 1000 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MSG _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MSG _pdbx_nmr_representative.selection_criteria 'minimized average structure' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Bruker Biospin' processing 'X-PLOR NIH' 2.36 1 'Bruker Biospin' 'chemical shift assignment' 'X-PLOR NIH' 2.36 2 'Bruker Biospin' 'data analysis' 'X-PLOR NIH' 2.36 3 'Bruker Biospin' refinement 'X-PLOR NIH' 2.36 4 'Bruker Biospin' 'structure validation' 'X-PLOR NIH' 2.36 5 Goddard processing 'X-PLOR NIH' 2.36 6 Goddard 'chemical shift assignment' 'X-PLOR NIH' 2.36 7 Goddard 'data analysis' 'X-PLOR NIH' 2.36 8 Goddard refinement 'X-PLOR NIH' 2.36 9 Goddard 'structure validation' 'X-PLOR NIH' 2.36 10 'Cornilescu, Delaglio and Bax' processing 'X-PLOR NIH' 2.36 11 'Cornilescu, Delaglio and Bax' 'chemical shift assignment' 'X-PLOR NIH' 2.36 12 'Cornilescu, Delaglio and Bax' 'data analysis' 'X-PLOR NIH' 2.36 13 'Cornilescu, Delaglio and Bax' refinement 'X-PLOR NIH' 2.36 14 'Cornilescu, Delaglio and Bax' 'structure validation' 'X-PLOR NIH' 2.36 15 'Schwieters, Kuszewski, Tjandra and Clore' processing 'X-PLOR NIH' 2.36 16 'Schwieters, Kuszewski, Tjandra and Clore' 'chemical shift assignment' 'X-PLOR NIH' 2.36 17 'Schwieters, Kuszewski, Tjandra and Clore' 'data analysis' 'X-PLOR NIH' 2.36 18 'Schwieters, Kuszewski, Tjandra and Clore' refinement 'X-PLOR NIH' 2.36 19 'Schwieters, Kuszewski, Tjandra and Clore' 'structure validation' 'X-PLOR NIH' 2.36 20 'Bhattacharya and Montelione' processing 'X-PLOR NIH' 2.36 21 'Bhattacharya and Montelione' 'chemical shift assignment' 'X-PLOR NIH' 2.36 22 'Bhattacharya and Montelione' 'data analysis' 'X-PLOR NIH' 2.36 23 'Bhattacharya and Montelione' refinement 'X-PLOR NIH' 2.36 24 'Bhattacharya and Montelione' 'structure validation' 'X-PLOR NIH' 2.36 25 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2MSG _exptl.method 'SOLID-STATE NMR' _exptl.method_details ? # _struct.entry_id 2MSG _struct.title 'Solid-state NMR structure of ubiquitin' _struct.pdbx_model_details 'minimized average structure, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MSG _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'UBIQUITIN FOLD, SIGNALING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 22 ? GLU A 34 ? THR A 22 GLU A 34 1 ? 13 HELX_P HELX_P2 2 LEU A 56 ? ASN A 60 ? LEU A 56 ASN A 60 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 13 ? LEU A 15 ? ILE A 13 LEU A 15 A 2 ILE A 3 ? LYS A 6 ? ILE A 3 LYS A 6 A 3 THR A 66 ? HIS A 68 ? THR A 66 HIS A 68 B 1 ILE A 44 ? PHE A 45 ? ILE A 44 PHE A 45 B 2 LYS A 48 ? GLN A 49 ? LYS A 48 GLN A 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 15 ? O LEU A 15 N ILE A 3 ? N ILE A 3 A 2 3 N PHE A 4 ? N PHE A 4 O LEU A 67 ? O LEU A 67 B 1 2 N PHE A 45 ? N PHE A 45 O LYS A 48 ? O LYS A 48 # _atom_sites.entry_id 2MSG _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 HIS 68 68 68 HIS HIS A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 ARG 72 72 72 ARG ARG A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-02-18 2 'Structure model' 1 1 2015-05-13 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_pdbx_nmr_software.name' 5 3 'Structure model' '_pdbx_nmr_spectrometer.model' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id Ubiquitin-1 20 ? mg/mL '[U-100% 13C; U-100% 15N]' 1 Ubiquitin-2 30 ? mg/mL '[1-glucose 13C,U-100% 15N]' 1 Ubiquitin-3 40 ? mg/mL '[2-glucose 13C,U-100% 15N]' 1 MPD-4 40 ? v/v ? 1 CdCl2-5 0.2 ? mg/mL ? 1 DSS-6 1 ? mg/mL ? 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A GLN 62 ? ? H A GLU 64 ? ? 1.23 2 1 O A SER 20 ? ? H A LEU 56 ? ? 1.33 3 1 O A THR 22 ? ? H A VAL 26 ? ? 1.42 4 1 H A PHE 45 ? ? O A LYS 48 ? ? 1.46 5 1 O A MET 1 ? ? O A VAL 17 ? ? 2.15 6 1 O A GLN 62 ? ? N A GLU 64 ? ? 2.17 7 2 O A GLN 62 ? ? H A GLU 64 ? ? 1.28 8 2 O A SER 20 ? ? H A LEU 56 ? ? 1.31 9 2 O A THR 22 ? ? H A VAL 26 ? ? 1.46 10 2 O A GLU 18 ? ? OD1 A ASP 21 ? ? 1.86 11 2 O A GLN 31 ? ? O A GLU 34 ? ? 2.15 12 3 O A GLN 62 ? ? H A GLU 64 ? ? 1.27 13 3 O A SER 20 ? ? H A LEU 56 ? ? 1.42 14 3 O A THR 22 ? ? H A VAL 26 ? ? 1.48 15 3 O A ILE 44 ? ? H A HIS 68 ? ? 1.58 16 4 O A GLN 62 ? ? H A GLU 64 ? ? 1.23 17 4 O A SER 20 ? ? H A LEU 56 ? ? 1.36 18 4 O A THR 22 ? ? H A VAL 26 ? ? 1.52 19 4 H A PHE 45 ? ? O A LYS 48 ? ? 1.54 20 4 O A PHE 45 ? ? H A LYS 48 ? ? 1.60 21 4 O A GLN 62 ? ? N A GLU 64 ? ? 2.17 22 5 O A GLN 62 ? ? H A GLU 64 ? ? 1.31 23 5 O A SER 20 ? ? H A LEU 56 ? ? 1.37 24 5 O A THR 22 ? ? H A VAL 26 ? ? 1.44 25 5 O A ILE 23 ? ? H A LYS 27 ? ? 1.55 26 6 O A GLN 62 ? ? H A GLU 64 ? ? 1.26 27 6 O A THR 22 ? ? H A VAL 26 ? ? 1.47 28 6 O A SER 20 ? ? H A LEU 56 ? ? 1.54 29 6 O A PRO 19 ? ? N A SER 57 ? ? 2.13 30 7 O A GLN 62 ? ? H A GLU 64 ? ? 1.30 31 7 O A THR 22 ? ? H A VAL 26 ? ? 1.39 32 7 O A SER 20 ? ? H A LEU 56 ? ? 1.49 33 8 O A GLN 62 ? ? H A GLU 64 ? ? 1.30 34 8 O A SER 20 ? ? H A LEU 56 ? ? 1.47 35 8 O A THR 22 ? ? H A VAL 26 ? ? 1.52 36 8 O A PRO 19 ? ? N A SER 57 ? ? 2.12 37 9 O A GLN 62 ? ? H A GLU 64 ? ? 1.28 38 9 O A SER 20 ? ? H A LEU 56 ? ? 1.43 39 9 O A THR 22 ? ? H A VAL 26 ? ? 1.56 40 9 H A PHE 45 ? ? O A LYS 48 ? ? 1.59 41 9 O A PRO 19 ? ? OD1 A ASP 21 ? ? 2.18 42 10 O A GLN 62 ? ? H A GLU 64 ? ? 1.30 43 10 O A SER 20 ? ? H A LEU 56 ? ? 1.36 44 10 HZ2 A LYS 27 ? ? O A GLN 41 ? ? 1.53 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 21 ? ? 31.57 64.01 2 1 ASP A 52 ? ? -54.97 8.31 3 1 LYS A 63 ? ? -41.15 25.52 4 1 GLU A 64 ? ? 91.01 53.67 5 2 ASP A 21 ? ? 31.54 67.86 6 2 ASP A 52 ? ? -48.80 6.09 7 2 LYS A 63 ? ? -42.05 30.24 8 2 GLU A 64 ? ? 91.38 53.16 9 2 LEU A 71 ? ? -146.07 -47.35 10 3 ASP A 21 ? ? 32.88 67.19 11 3 ASP A 39 ? ? -59.50 -8.18 12 3 ASP A 52 ? ? -47.59 5.32 13 3 LYS A 63 ? ? -41.62 26.19 14 3 GLU A 64 ? ? 90.64 54.59 15 3 LEU A 71 ? ? 77.46 121.36 16 4 ASP A 21 ? ? 33.43 68.27 17 4 ASP A 52 ? ? -49.00 5.51 18 4 LYS A 63 ? ? -41.03 26.30 19 4 GLU A 64 ? ? 90.94 52.45 20 5 ASP A 21 ? ? 32.24 66.86 21 5 GLU A 34 ? ? -160.46 -116.11 22 5 ASP A 52 ? ? -47.92 7.17 23 5 LYS A 63 ? ? -43.05 28.05 24 5 GLU A 64 ? ? 92.52 53.81 25 6 PRO A 19 ? ? -52.02 -8.86 26 6 ASP A 21 ? ? 31.32 65.64 27 6 GLU A 51 ? ? -69.13 -168.94 28 6 ASP A 52 ? ? -46.79 5.99 29 6 LYS A 63 ? ? -41.74 28.66 30 6 GLU A 64 ? ? 91.35 54.59 31 7 ASP A 21 ? ? 32.71 64.96 32 7 ASP A 52 ? ? -45.65 8.51 33 7 LYS A 63 ? ? -41.24 28.66 34 7 GLU A 64 ? ? 92.94 55.04 35 7 LEU A 71 ? ? -47.07 -71.93 36 8 PRO A 19 ? ? -49.77 -7.96 37 8 ASP A 21 ? ? 30.53 64.65 38 8 ASP A 52 ? ? -48.51 5.76 39 8 LYS A 63 ? ? -43.28 30.90 40 8 GLU A 64 ? ? 91.02 52.49 41 8 LEU A 71 ? ? 80.01 111.81 42 9 ASP A 21 ? ? 33.36 68.76 43 9 ASP A 52 ? ? -47.42 7.61 44 9 LYS A 63 ? ? -43.27 29.98 45 9 GLU A 64 ? ? 92.37 51.52 46 10 ASP A 21 ? ? 32.92 69.76 47 10 ASP A 52 ? ? -46.69 7.09 48 10 LYS A 63 ? ? -43.36 30.63 49 10 GLU A 64 ? ? 91.73 54.17 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 42 ? ? 0.306 'SIDE CHAIN' 2 1 ARG A 54 ? ? 0.266 'SIDE CHAIN' 3 1 ARG A 72 ? ? 0.142 'SIDE CHAIN' 4 2 ARG A 42 ? ? 0.277 'SIDE CHAIN' 5 2 ARG A 54 ? ? 0.308 'SIDE CHAIN' 6 2 ARG A 72 ? ? 0.120 'SIDE CHAIN' 7 3 ARG A 42 ? ? 0.149 'SIDE CHAIN' 8 3 ARG A 54 ? ? 0.283 'SIDE CHAIN' 9 3 ARG A 72 ? ? 0.295 'SIDE CHAIN' 10 4 ARG A 42 ? ? 0.279 'SIDE CHAIN' 11 4 ARG A 54 ? ? 0.288 'SIDE CHAIN' 12 4 ARG A 72 ? ? 0.249 'SIDE CHAIN' 13 5 ARG A 42 ? ? 0.275 'SIDE CHAIN' 14 5 ARG A 54 ? ? 0.164 'SIDE CHAIN' 15 5 ARG A 72 ? ? 0.302 'SIDE CHAIN' 16 6 ARG A 42 ? ? 0.274 'SIDE CHAIN' 17 6 ARG A 54 ? ? 0.222 'SIDE CHAIN' 18 6 ARG A 72 ? ? 0.134 'SIDE CHAIN' 19 7 ARG A 42 ? ? 0.308 'SIDE CHAIN' 20 7 ARG A 72 ? ? 0.308 'SIDE CHAIN' 21 8 ARG A 42 ? ? 0.285 'SIDE CHAIN' 22 8 ARG A 54 ? ? 0.159 'SIDE CHAIN' 23 8 ARG A 72 ? ? 0.303 'SIDE CHAIN' 24 9 ARG A 42 ? ? 0.158 'SIDE CHAIN' 25 9 ARG A 54 ? ? 0.279 'SIDE CHAIN' 26 9 ARG A 72 ? ? 0.131 'SIDE CHAIN' 27 10 ARG A 54 ? ? 0.280 'SIDE CHAIN' 28 10 ARG A 72 ? ? 0.299 'SIDE CHAIN' #