HEADER PROTEIN BINDING/CELL ADHESION 28-AUG-14 2MTP TITLE THE STRUCTURE OF FILAMIN REPEAT 21 BOUND TO INTEGRIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: FILAMIN-A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 2236-2330; COMPND 5 SYNONYM: FLN-A, ACTIN-BINDING PROTEIN 280, ABP-280, ALPHA-FILAMIN, COMPND 6 ENDOTHELIAL ACTIN-BINDING PROTEIN, FILAMIN-1, NON-MUSCLE FILAMIN; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: INTEGRIN ALPHA-IIB; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: UNP RESIDUES 1019-1039; COMPND 12 SYNONYM: GPALPHA IIB, GPIIB, PLATELET MEMBRANE GLYCOPROTEIN IIB, COMPND 13 INTEGRIN ALPHA-IIB HEAVY CHAIN, INTEGRIN ALPHA-IIB LIGHT CHAIN, FORM COMPND 14 1, INTEGRIN ALPHA-IIB LIGHT CHAIN, FORM 2; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 3; COMPND 17 MOLECULE: INTEGRIN BETA-3; COMPND 18 CHAIN: C; COMPND 19 FRAGMENT: UNP RESIDUES 742-788; COMPND 20 SYNONYM: PLATELET MEMBRANE GLYCOPROTEIN IIIA, GPIIIA; COMPND 21 ENGINEERED: YES; COMPND 22 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 COLLECTION: 562; SOURCE 6 GENE: FLNA, FLN, FLN1; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PGST PARALLEL; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 COLLECTION: 562; SOURCE 15 GENE: ITGA2B, GP2B, ITGAB; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_VECTOR: PET31B; SOURCE 19 MOL_ID: 3; SOURCE 20 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 21 ORGANISM_COMMON: HUMAN; SOURCE 22 ORGANISM_TAXID: 9606; SOURCE 23 COLLECTION: 562; SOURCE 24 GENE: ITGB3, GP3A; SOURCE 25 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 27 EXPRESSION_SYSTEM_VECTOR: PET15B KEYWDS INTEGRIN, FILAMIN, PROTEIN BINDING-CELL ADHESION COMPLEX EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.LIU,J.QIN REVDAT 3 14-JUN-23 2MTP 1 REMARK SEQADV REVDAT 2 01-JUL-15 2MTP 1 JRNL REVDAT 1 01-APR-15 2MTP 0 JRNL AUTH J.LIU,M.DAS,J.YANG,S.S.ITHYCHANDA,V.P.YAKUBENKO,E.F.PLOW, JRNL AUTH 2 J.QIN JRNL TITL STRUCTURAL MECHANISM OF INTEGRIN INACTIVATION BY FILAMIN. JRNL REF NAT.STRUCT.MOL.BIOL. V. 22 383 2015 JRNL REFN ISSN 1545-9993 JRNL PMID 25849143 JRNL DOI 10.1038/NSMB.2999 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH, X-PLOR NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (X-PLOR REMARK 3 NIH), SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (X- REMARK 3 PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MTP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000104032. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.4 REMARK 210 IONIC STRENGTH : 25 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N; U REMARK 210 -80% 2H] PROTEIN, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 2251 H ALA A 2326 1.47 REMARK 500 O GLY A 2277 H TYR C 747 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A2238 -13.05 -49.26 REMARK 500 1 ARG A2250 175.33 178.52 REMARK 500 1 ALA A2251 -159.43 -159.87 REMARK 500 1 PRO A2256 103.58 -42.32 REMARK 500 1 PHE A2259 -176.42 -176.40 REMARK 500 1 THR A2263 16.08 -163.91 REMARK 500 1 LYS A2280 -163.91 -69.07 REMARK 500 1 ALA A2281 114.38 177.29 REMARK 500 1 SER A2292 -163.59 -58.14 REMARK 500 1 GLU A2313 34.52 79.14 REMARK 500 1 PRO A2317 155.34 -35.91 REMARK 500 1 PRO A2328 127.34 -32.51 REMARK 500 1 SER A2329 95.94 -45.73 REMARK 500 1 LYS B 989 -166.37 43.87 REMARK 500 1 VAL B 990 -25.88 -38.79 REMARK 500 1 PHE B 992 -58.81 -2.08 REMARK 500 1 ASN B 996 92.57 -43.13 REMARK 500 1 PRO B 998 91.88 -25.28 REMARK 500 1 PRO B 999 93.62 -50.26 REMARK 500 1 GLU B1001 75.28 -168.07 REMARK 500 1 GLU B1006 -92.69 -63.24 REMARK 500 1 LYS C 717 26.02 -176.08 REMARK 500 1 LYS C 718 -40.05 -170.94 REMARK 500 1 PHE C 730 -14.47 -45.57 REMARK 500 1 ALA C 735 -162.32 45.59 REMARK 500 1 ARG C 736 -126.90 55.07 REMARK 500 1 ALA C 737 -171.44 -178.59 REMARK 500 1 THR C 741 -164.47 -173.00 REMARK 500 1 ALA C 742 -77.71 58.36 REMARK 500 1 ASN C 743 7.08 -67.96 REMARK 500 1 TYR C 747 75.77 -69.43 REMARK 500 1 ASN C 756 90.42 53.10 REMARK 500 1 ILE C 757 -170.81 -64.84 REMARK 500 2 ARG A2250 176.43 176.65 REMARK 500 2 ALA A2251 -159.52 -169.81 REMARK 500 2 PRO A2256 104.80 -40.03 REMARK 500 2 THR A2263 15.98 -157.64 REMARK 500 2 ALA A2281 114.58 178.83 REMARK 500 2 SER A2292 -166.23 -56.88 REMARK 500 2 GLU A2306 113.23 -161.93 REMARK 500 2 HIS A2315 105.21 -55.35 REMARK 500 2 PRO A2317 154.91 -35.10 REMARK 500 2 VAL A2323 84.17 -150.28 REMARK 500 2 PRO A2328 133.59 -32.56 REMARK 500 2 SER A2329 95.76 -46.24 REMARK 500 2 LYS B 989 105.18 34.56 REMARK 500 2 VAL B 990 -43.12 23.51 REMARK 500 2 PHE B 992 -65.21 -0.45 REMARK 500 2 ASN B 996 71.30 -63.48 REMARK 500 2 ARG B 997 93.96 42.92 REMARK 500 REMARK 500 THIS ENTRY HAS 706 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A2264 0.32 SIDE CHAIN REMARK 500 1 ARG A2288 0.30 SIDE CHAIN REMARK 500 2 ARG A2242 0.24 SIDE CHAIN REMARK 500 2 ARG A2250 0.26 SIDE CHAIN REMARK 500 2 ARG A2264 0.22 SIDE CHAIN REMARK 500 2 ARG A2288 0.21 SIDE CHAIN REMARK 500 3 ARG A2242 0.26 SIDE CHAIN REMARK 500 3 ARG A2264 0.30 SIDE CHAIN REMARK 500 3 ARG A2288 0.32 SIDE CHAIN REMARK 500 4 ARG A2250 0.29 SIDE CHAIN REMARK 500 4 ARG A2264 0.09 SIDE CHAIN REMARK 500 4 ARG A2288 0.14 SIDE CHAIN REMARK 500 5 ARG A2242 0.28 SIDE CHAIN REMARK 500 5 ARG A2264 0.32 SIDE CHAIN REMARK 500 5 ARG A2288 0.18 SIDE CHAIN REMARK 500 6 ARG A2242 0.31 SIDE CHAIN REMARK 500 6 ARG A2250 0.29 SIDE CHAIN REMARK 500 6 ARG A2264 0.14 SIDE CHAIN REMARK 500 6 ARG A2288 0.18 SIDE CHAIN REMARK 500 7 ARG A2242 0.32 SIDE CHAIN REMARK 500 7 ARG A2250 0.27 SIDE CHAIN REMARK 500 7 ARG A2264 0.19 SIDE CHAIN REMARK 500 7 ARG A2288 0.31 SIDE CHAIN REMARK 500 8 ARG A2242 0.29 SIDE CHAIN REMARK 500 8 ARG A2250 0.31 SIDE CHAIN REMARK 500 8 ARG A2264 0.32 SIDE CHAIN REMARK 500 8 ARG A2288 0.31 SIDE CHAIN REMARK 500 9 ARG A2250 0.31 SIDE CHAIN REMARK 500 9 ARG A2264 0.25 SIDE CHAIN REMARK 500 9 ARG A2288 0.24 SIDE CHAIN REMARK 500 10 ARG A2242 0.24 SIDE CHAIN REMARK 500 10 ARG A2250 0.10 SIDE CHAIN REMARK 500 10 ARG A2288 0.26 SIDE CHAIN REMARK 500 11 ARG A2242 0.14 SIDE CHAIN REMARK 500 11 ARG A2250 0.32 SIDE CHAIN REMARK 500 11 ARG A2264 0.08 SIDE CHAIN REMARK 500 11 ARG A2288 0.10 SIDE CHAIN REMARK 500 12 ARG A2242 0.32 SIDE CHAIN REMARK 500 12 ARG A2264 0.23 SIDE CHAIN REMARK 500 12 ARG A2288 0.13 SIDE CHAIN REMARK 500 13 ARG A2242 0.32 SIDE CHAIN REMARK 500 13 ARG A2250 0.09 SIDE CHAIN REMARK 500 13 ARG A2264 0.27 SIDE CHAIN REMARK 500 13 ARG A2288 0.31 SIDE CHAIN REMARK 500 14 ARG A2242 0.22 SIDE CHAIN REMARK 500 14 ARG A2264 0.12 SIDE CHAIN REMARK 500 14 ARG A2288 0.28 SIDE CHAIN REMARK 500 15 ARG A2264 0.26 SIDE CHAIN REMARK 500 15 ARG A2288 0.26 SIDE CHAIN REMARK 500 16 ARG A2242 0.20 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 65 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25176 RELATED DB: BMRB DBREF 2MTP A 2236 2330 UNP P21333 FLNA_HUMAN 2236 2330 DBREF 2MTP B 988 1008 UNP P08514 ITA2B_HUMAN 1019 1039 DBREF 2MTP C 716 762 UNP P05106 ITB3_HUMAN 742 788 SEQADV 2MTP LYS C 717 UNP P05106 LEU 743 ENGINEERED MUTATION SEQADV 2MTP LYS C 718 UNP P05106 LEU 744 ENGINEERED MUTATION SEQRES 1 A 95 GLY GLY ALA HIS LYS VAL ARG ALA GLY GLY PRO GLY LEU SEQRES 2 A 95 GLU ARG ALA GLU ALA GLY VAL PRO ALA GLU PHE SER ILE SEQRES 3 A 95 TRP THR ARG GLU ALA GLY ALA GLY GLY LEU ALA ILE ALA SEQRES 4 A 95 VAL GLU GLY PRO SER LYS ALA GLU ILE SER PHE GLU ASP SEQRES 5 A 95 ARG LYS ASP GLY SER CYS GLY VAL ALA TYR VAL VAL GLN SEQRES 6 A 95 GLU PRO GLY ASP TYR GLU VAL SER VAL LYS PHE ASN GLU SEQRES 7 A 95 GLU HIS ILE PRO ASP SER PRO PHE VAL VAL PRO VAL ALA SEQRES 8 A 95 SER PRO SER GLY SEQRES 1 B 21 TRP LYS VAL GLY PHE PHE LYS ARG ASN ARG PRO PRO LEU SEQRES 2 B 21 GLU GLU ASP ASP GLU GLU GLY GLU SEQRES 1 C 47 LYS LYS LYS ILE THR ILE HIS ASP ARG LYS GLU PHE ALA SEQRES 2 C 47 LYS PHE GLU GLU GLU ARG ALA ARG ALA LYS TRP ASP THR SEQRES 3 C 47 ALA ASN ASN PRO LEU TYR LYS GLU ALA THR SER THR PHE SEQRES 4 C 47 THR ASN ILE THR TYR ARG GLY THR HELIX 1 1 GLY A 2245 ARG A 2250 1 6 HELIX 2 2 VAL B 990 ASN B 996 1 7 HELIX 3 3 LYS C 718 ALA C 735 1 18 SHEET 1 A 2 ALA A2251 GLU A2252 0 SHEET 2 A 2 VAL A2325 ALA A2326 1 O ALA A2326 N ALA A2251 SHEET 1 B 3 ALA A2257 GLU A2258 0 SHEET 2 B 3 GLY A2294 VAL A2298 -1 O TYR A2297 N ALA A2257 SHEET 3 B 3 GLU A2282 GLU A2286 -1 N SER A2284 O ALA A2296 SHEET 1 C 4 PHE A2321 VAL A2322 0 SHEET 2 C 4 GLU A2306 VAL A2307 -1 N VAL A2307 O PHE A2321 SHEET 3 C 4 ALA A2274 GLU A2276 -1 N GLU A2276 O GLU A2306 SHEET 4 C 4 GLU C 749 ALA C 750 -1 O GLU C 749 N VAL A2275 SHEET 1 D 2 LYS A2310 PHE A2311 0 SHEET 2 D 2 GLU A2314 HIS A2315 -1 O GLU A2314 N PHE A2311 CISPEP 1 SER A 2319 PRO A 2320 1 -0.73 CISPEP 2 SER A 2319 PRO A 2320 2 -1.23 CISPEP 3 SER A 2319 PRO A 2320 3 -0.26 CISPEP 4 SER A 2319 PRO A 2320 4 -0.89 CISPEP 5 SER A 2319 PRO A 2320 5 -0.70 CISPEP 6 SER A 2319 PRO A 2320 6 -0.93 CISPEP 7 SER A 2319 PRO A 2320 7 -0.50 CISPEP 8 SER A 2319 PRO A 2320 8 -0.17 CISPEP 9 SER A 2319 PRO A 2320 9 -0.51 CISPEP 10 SER A 2319 PRO A 2320 10 -0.17 CISPEP 11 SER A 2319 PRO A 2320 11 0.58 CISPEP 12 SER A 2319 PRO A 2320 12 -0.14 CISPEP 13 SER A 2319 PRO A 2320 13 -0.82 CISPEP 14 SER A 2319 PRO A 2320 14 -0.17 CISPEP 15 SER A 2319 PRO A 2320 15 -1.11 CISPEP 16 SER A 2319 PRO A 2320 16 -0.94 CISPEP 17 SER A 2319 PRO A 2320 17 -0.66 CISPEP 18 SER A 2319 PRO A 2320 18 -0.42 CISPEP 19 SER A 2319 PRO A 2320 19 0.36 CISPEP 20 SER A 2319 PRO A 2320 20 0.45 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1