data_2MUM # _entry.id 2MUM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2MUM pdb_00002mum 10.2210/pdb2mum/pdb RCSB RCSB104064 ? ? BMRB 25221 ? ? WWPDB D_1000104064 ? ? # _pdbx_database_related.db_id 25221 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MUM _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-09-12 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Taeb, S.' 1 'Kaustov, L.' 2 'Lemak, A.' 3 'Farhadi, S.' 4 'Sheng, Y.' 5 # _citation.id primary _citation.title 'Solution structure of the PHD domain of Yeast YNG2' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Taeb, S.' 1 ? primary 'Kaustov, L.' 2 ? primary 'Lemak, A.' 3 ? primary 'Farhadi, S.' 4 ? primary 'Sheng, Y.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Chromatin modification-related protein YNG2' 5938.829 1 ? ? 'PHD-type domain residues 222-271' ? 2 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ESA1-associated factor 4, ING1 homolog 2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code TLYCFCQRVSFGEMVACDGPNCKYEWFHYDCVNLKEPPKGTWYCPECKIE _entity_poly.pdbx_seq_one_letter_code_can TLYCFCQRVSFGEMVACDGPNCKYEWFHYDCVNLKEPPKGTWYCPECKIE _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 LEU n 1 3 TYR n 1 4 CYS n 1 5 PHE n 1 6 CYS n 1 7 GLN n 1 8 ARG n 1 9 VAL n 1 10 SER n 1 11 PHE n 1 12 GLY n 1 13 GLU n 1 14 MET n 1 15 VAL n 1 16 ALA n 1 17 CYS n 1 18 ASP n 1 19 GLY n 1 20 PRO n 1 21 ASN n 1 22 CYS n 1 23 LYS n 1 24 TYR n 1 25 GLU n 1 26 TRP n 1 27 PHE n 1 28 HIS n 1 29 TYR n 1 30 ASP n 1 31 CYS n 1 32 VAL n 1 33 ASN n 1 34 LEU n 1 35 LYS n 1 36 GLU n 1 37 PRO n 1 38 PRO n 1 39 LYS n 1 40 GLY n 1 41 THR n 1 42 TRP n 1 43 TYR n 1 44 CYS n 1 45 PRO n 1 46 GLU n 1 47 CYS n 1 48 LYS n 1 49 ILE n 1 50 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'YNG2, EAF4, NBN1, YHR090C' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 204508 / S288c' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae S288c' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 559292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pET15b _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YNG2_YEAST _struct_ref.pdbx_db_accession P38806 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code TLYCFCQRVSFGEMVACDGPNCKYEWFHYDCVNLKEPPKGTWYCPECKIE _struct_ref.pdbx_align_begin 222 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2MUM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 50 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P38806 _struct_ref_seq.db_align_beg 222 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 271 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 222 _struct_ref_seq.pdbx_auth_seq_align_end 271 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '3D 1H-15N NOESY' 1 2 1 '3D 1H-13C NOESY' 1 3 1 '3D HNCA' 1 4 1 '3D CBCA(CO)NH' 1 5 1 '3D HCCH-TOCSY' 1 6 1 '3D HBHA(CO)NH' 1 7 1 '3D HCCH-TOCSY' 1 8 1 '3D HNCO' 1 9 1 '2D 1H-15N HSQC' 1 10 1 '2D 1H-13C HSQC' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 300 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents ;0.5 mM [U-13C; U-15N] protein, 300 mM sodium chloride, 2.7 mM potassium chloride, 2 mM potassium phosphate, 10 mM sodium phosphate, 0.05 mM CHAPS, 90% H2O/10% D2O ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2MUM _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MUM _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MUM _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Bruker Biospin' collection TopSpin ? 1 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 2 Goddard 'peak picking' Sparky ? 3 'Lemak A., Gutmanas A., Chitayat S., Karra M., Far s C., Sunnerhagen M., and Arrowsmith C.H.' 'chemical shift assignment' FMCGUI ? 4 'Lemak A., Gutmanas A., Chitayat S., Karra M., Far s C., Sunnerhagen M., and Arrowsmith C.H.' refinement FMCGUI ? 5 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA ? 6 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNSSOLVE ? 7 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS ? 8 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2MUM _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2MUM _struct.title 'Solution structure of the PHD domain of Yeast YNG2' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MUM _struct_keywords.pdbx_keywords 'Transcription Regulator' _struct_keywords.text 'PHD finger, Transcription Regulator' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id CYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 44 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLU _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 50 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id CYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 265 _struct_conf.end_auth_comp_id GLU _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 271 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 4 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 225 A ZN 301 1_555 ? ? ? ? ? ? ? 2.311 ? ? metalc2 metalc ? ? A CYS 6 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 227 A ZN 301 1_555 ? ? ? ? ? ? ? 2.357 ? ? metalc3 metalc ? ? A CYS 17 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 238 A ZN 302 1_555 ? ? ? ? ? ? ? 2.327 ? ? metalc4 metalc ? ? A CYS 22 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 243 A ZN 302 1_555 ? ? ? ? ? ? ? 2.349 ? ? metalc5 metalc ? ? A HIS 28 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 249 A ZN 301 1_555 ? ? ? ? ? ? ? 2.086 ? ? metalc6 metalc ? ? A CYS 31 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 252 A ZN 301 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc7 metalc ? ? A CYS 44 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 265 A ZN 302 1_555 ? ? ? ? ? ? ? 2.314 ? ? metalc8 metalc ? ? A CYS 47 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 268 A ZN 302 1_555 ? ? ? ? ? ? ? 2.336 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 15 ? ALA A 16 ? VAL A 236 ALA A 237 A 2 TRP A 26 ? PHE A 27 ? TRP A 247 PHE A 248 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id VAL _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 15 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 236 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id PHE _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 27 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id PHE _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 248 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 301 ? 4 'BINDING SITE FOR RESIDUE ZN A 301' AC2 Software A ZN 302 ? 4 'BINDING SITE FOR RESIDUE ZN A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 4 ? CYS A 225 . ? 1_555 ? 2 AC1 4 CYS A 6 ? CYS A 227 . ? 1_555 ? 3 AC1 4 HIS A 28 ? HIS A 249 . ? 1_555 ? 4 AC1 4 CYS A 31 ? CYS A 252 . ? 1_555 ? 5 AC2 4 CYS A 17 ? CYS A 238 . ? 1_555 ? 6 AC2 4 CYS A 22 ? CYS A 243 . ? 1_555 ? 7 AC2 4 CYS A 44 ? CYS A 265 . ? 1_555 ? 8 AC2 4 CYS A 47 ? CYS A 268 . ? 1_555 ? # _atom_sites.entry_id 2MUM _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 222 222 THR THR A . n A 1 2 LEU 2 223 223 LEU LEU A . n A 1 3 TYR 3 224 224 TYR TYR A . n A 1 4 CYS 4 225 225 CYS CYS A . n A 1 5 PHE 5 226 226 PHE PHE A . n A 1 6 CYS 6 227 227 CYS CYS A . n A 1 7 GLN 7 228 228 GLN GLN A . n A 1 8 ARG 8 229 229 ARG ARG A . n A 1 9 VAL 9 230 230 VAL VAL A . n A 1 10 SER 10 231 231 SER SER A . n A 1 11 PHE 11 232 232 PHE PHE A . n A 1 12 GLY 12 233 233 GLY GLY A . n A 1 13 GLU 13 234 234 GLU GLU A . n A 1 14 MET 14 235 235 MET MET A . n A 1 15 VAL 15 236 236 VAL VAL A . n A 1 16 ALA 16 237 237 ALA ALA A . n A 1 17 CYS 17 238 238 CYS CYS A . n A 1 18 ASP 18 239 239 ASP ASP A . n A 1 19 GLY 19 240 240 GLY GLY A . n A 1 20 PRO 20 241 241 PRO PRO A . n A 1 21 ASN 21 242 242 ASN ASN A . n A 1 22 CYS 22 243 243 CYS CYS A . n A 1 23 LYS 23 244 244 LYS LYS A . n A 1 24 TYR 24 245 245 TYR TYR A . n A 1 25 GLU 25 246 246 GLU GLU A . n A 1 26 TRP 26 247 247 TRP TRP A . n A 1 27 PHE 27 248 248 PHE PHE A . n A 1 28 HIS 28 249 249 HIS HIS A . n A 1 29 TYR 29 250 250 TYR TYR A . n A 1 30 ASP 30 251 251 ASP ASP A . n A 1 31 CYS 31 252 252 CYS CYS A . n A 1 32 VAL 32 253 253 VAL VAL A . n A 1 33 ASN 33 254 254 ASN ASN A . n A 1 34 LEU 34 255 255 LEU LEU A . n A 1 35 LYS 35 256 256 LYS LYS A . n A 1 36 GLU 36 257 257 GLU GLU A . n A 1 37 PRO 37 258 258 PRO PRO A . n A 1 38 PRO 38 259 259 PRO PRO A . n A 1 39 LYS 39 260 260 LYS LYS A . n A 1 40 GLY 40 261 261 GLY GLY A . n A 1 41 THR 41 262 262 THR THR A . n A 1 42 TRP 42 263 263 TRP TRP A . n A 1 43 TYR 43 264 264 TYR TYR A . n A 1 44 CYS 44 265 265 CYS CYS A . n A 1 45 PRO 45 266 266 PRO PRO A . n A 1 46 GLU 46 267 267 GLU GLU A . n A 1 47 CYS 47 268 268 CYS CYS A . n A 1 48 LYS 48 269 269 LYS LYS A . n A 1 49 ILE 49 270 270 ILE ILE A . n A 1 50 GLU 50 271 271 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 301 51 ZN ZN A . C 2 ZN 1 302 52 ZN ZN A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 4 ? A CYS 225 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 SG ? A CYS 6 ? A CYS 227 ? 1_555 109.9 ? 2 SG ? A CYS 4 ? A CYS 225 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 NE2 ? A HIS 28 ? A HIS 249 ? 1_555 105.9 ? 3 SG ? A CYS 6 ? A CYS 227 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 NE2 ? A HIS 28 ? A HIS 249 ? 1_555 109.7 ? 4 SG ? A CYS 4 ? A CYS 225 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 SG ? A CYS 31 ? A CYS 252 ? 1_555 110.3 ? 5 SG ? A CYS 6 ? A CYS 227 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 SG ? A CYS 31 ? A CYS 252 ? 1_555 114.9 ? 6 NE2 ? A HIS 28 ? A HIS 249 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 SG ? A CYS 31 ? A CYS 252 ? 1_555 105.6 ? 7 SG ? A CYS 17 ? A CYS 238 ? 1_555 ZN ? C ZN . ? A ZN 302 ? 1_555 SG ? A CYS 22 ? A CYS 243 ? 1_555 111.5 ? 8 SG ? A CYS 17 ? A CYS 238 ? 1_555 ZN ? C ZN . ? A ZN 302 ? 1_555 SG ? A CYS 44 ? A CYS 265 ? 1_555 107.6 ? 9 SG ? A CYS 22 ? A CYS 243 ? 1_555 ZN ? C ZN . ? A ZN 302 ? 1_555 SG ? A CYS 44 ? A CYS 265 ? 1_555 110.3 ? 10 SG ? A CYS 17 ? A CYS 238 ? 1_555 ZN ? C ZN . ? A ZN 302 ? 1_555 SG ? A CYS 47 ? A CYS 268 ? 1_555 108.8 ? 11 SG ? A CYS 22 ? A CYS 243 ? 1_555 ZN ? C ZN . ? A ZN 302 ? 1_555 SG ? A CYS 47 ? A CYS 268 ? 1_555 109.3 ? 12 SG ? A CYS 44 ? A CYS 265 ? 1_555 ZN ? C ZN . ? A ZN 302 ? 1_555 SG ? A CYS 47 ? A CYS 268 ? 1_555 109.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-12-24 2 'Structure model' 1 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' pdbx_database_status 3 2 'Structure model' pdbx_nmr_software 4 2 'Structure model' pdbx_nmr_spectrometer 5 2 'Structure model' pdbx_struct_conn_angle 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 2 'Structure model' '_pdbx_nmr_software.name' 5 2 'Structure model' '_pdbx_nmr_spectrometer.model' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 16 2 'Structure model' '_pdbx_struct_conn_angle.value' 17 2 'Structure model' '_struct_conn.pdbx_dist_value' 18 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 24 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 25 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 26 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 27 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id entity_1-1 0.5 ? mM '[U-13C; U-15N]' 1 'sodium chloride-2' 300 ? mM ? 1 'potassium chloride-3' 2.7 ? mM ? 1 'potassium phosphate-4' 2 ? mM ? 1 'sodium phosphate-5' 10 ? mM ? 1 CHAPS-6 0.05 ? mM ? 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 225 ? ? 173.26 163.03 2 1 GLN A 228 ? ? 48.67 85.95 3 1 CYS A 243 ? ? -173.07 102.82 4 1 ASN A 254 ? ? 58.73 70.91 5 2 CYS A 225 ? ? 172.75 166.90 6 2 GLN A 228 ? ? 48.66 77.61 7 2 PHE A 232 ? ? -112.23 66.54 8 2 CYS A 243 ? ? -173.23 110.90 9 3 CYS A 225 ? ? 171.25 152.18 10 3 GLN A 228 ? ? 57.12 85.82 11 3 TYR A 245 ? ? -82.72 31.11 12 4 CYS A 225 ? ? 172.48 160.07 13 4 GLN A 228 ? ? 54.88 78.94 14 4 CYS A 243 ? ? -171.98 116.74 15 4 TYR A 245 ? ? -79.28 29.92 16 5 CYS A 225 ? ? 170.21 163.32 17 5 GLN A 228 ? ? 51.82 77.40 18 5 ASN A 242 ? ? -107.49 77.65 19 5 ILE A 270 ? ? -95.66 -72.06 20 6 CYS A 225 ? ? 170.58 158.47 21 6 GLN A 228 ? ? 50.01 81.15 22 6 ASN A 242 ? ? -110.81 70.81 23 6 CYS A 243 ? ? -167.40 107.08 24 6 TYR A 245 ? ? -79.62 24.77 25 6 PRO A 266 ? ? -23.67 -63.00 26 7 CYS A 225 ? ? 172.47 162.86 27 7 GLN A 228 ? ? 54.99 85.58 28 7 PRO A 259 ? ? -58.69 172.92 29 8 CYS A 225 ? ? 172.96 161.32 30 8 GLN A 228 ? ? 52.37 81.71 31 8 CYS A 243 ? ? -167.94 107.51 32 8 PRO A 266 ? ? -19.09 -70.11 33 9 CYS A 225 ? ? 172.20 153.13 34 9 GLN A 228 ? ? 54.09 80.55 35 9 CYS A 243 ? ? -168.75 81.15 36 10 CYS A 225 ? ? 171.80 163.84 37 10 GLN A 228 ? ? 46.45 81.86 38 10 SER A 231 ? ? -100.86 77.72 39 10 CYS A 243 ? ? -172.17 112.15 40 10 TYR A 245 ? ? -79.33 27.47 41 10 PRO A 266 ? ? -23.70 -64.88 42 11 CYS A 225 ? ? 174.08 158.08 43 11 SER A 231 ? ? -105.66 69.18 44 11 CYS A 243 ? ? -166.06 101.80 45 11 ASN A 254 ? ? 52.41 70.12 46 11 PRO A 266 ? ? -36.63 -38.80 47 12 CYS A 225 ? ? 172.29 155.69 48 12 GLN A 228 ? ? 52.16 85.46 49 12 CYS A 243 ? ? -174.75 104.60 50 12 LYS A 256 ? ? -145.86 -29.97 51 13 CYS A 225 ? ? 170.93 162.00 52 13 GLN A 228 ? ? 59.07 99.69 53 14 CYS A 225 ? ? 172.78 158.10 54 14 GLN A 228 ? ? 57.81 90.18 55 14 CYS A 243 ? ? -173.12 114.34 56 14 PRO A 266 ? ? -19.60 -70.05 57 15 CYS A 225 ? ? 171.45 157.46 58 15 GLN A 228 ? ? 55.84 73.69 59 15 ASP A 239 ? ? -69.96 95.39 60 15 CYS A 243 ? ? -161.38 91.03 61 16 CYS A 225 ? ? 175.13 166.67 62 16 GLN A 228 ? ? 56.46 89.38 63 16 CYS A 243 ? ? -173.13 89.42 64 16 PRO A 259 ? ? -68.14 -178.94 65 17 CYS A 225 ? ? 172.84 161.62 66 17 GLN A 228 ? ? 52.92 77.60 67 17 CYS A 243 ? ? -172.86 106.62 68 18 CYS A 225 ? ? 174.54 161.85 69 18 GLN A 228 ? ? 53.87 101.09 70 18 SER A 231 ? ? -116.86 60.57 71 18 CYS A 243 ? ? -177.39 104.76 72 18 PRO A 266 ? ? -27.25 -69.62 73 19 CYS A 225 ? ? 172.01 158.69 74 19 GLN A 228 ? ? 53.88 88.80 75 19 CYS A 243 ? ? -163.93 110.88 76 19 TYR A 245 ? ? -79.54 28.68 77 20 CYS A 225 ? ? 171.30 154.19 78 20 GLN A 228 ? ? 58.81 83.89 79 20 CYS A 243 ? ? -165.54 109.29 80 20 PRO A 266 ? ? -27.44 -60.32 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN #