HEADER    PROTEIN TRANSPORT/PROTEIN TRANSPORT     03-MAR-15   2N01              
TITLE     NMR STRUCTURE OF VIRB9 C-TERMINAL DOMAIN IN COMPLEX WITH VIRB7 N-     
TITLE    2 TERMINAL DOMAIN FROM XANTHOMONAS CITRI'S T4SS                        
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: VIRB7 PROTEIN;                                             
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: N-TERMINAL DOMAIN (UNP RESIDUES 24-46);                    
COMPND   5 ENGINEERED: YES;                                                     
COMPND   6 MOL_ID: 2;                                                           
COMPND   7 MOLECULE: VIRB9 PROTEIN;                                             
COMPND   8 CHAIN: B;                                                            
COMPND   9 FRAGMENT: C-TERMINAL DOMAIN (UNP RESIDUES 154-255);                  
COMPND  10 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES;                                                      
SOURCE   3 ORGANISM_SCIENTIFIC: XANTHOMONAS AXONOPODIS PV. CITRI;               
SOURCE   4 ORGANISM_TAXID: 190486;                                              
SOURCE   5 MOL_ID: 2;                                                           
SOURCE   6 ORGANISM_SCIENTIFIC: XANTHOMONAS AXONOPODIS PV. CITRI;               
SOURCE   7 ORGANISM_TAXID: 190486;                                              
SOURCE   8 STRAIN: 306;                                                         
SOURCE   9 GENE: VIRB9, XAC2620, XAC2622;                                       
SOURCE  10 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE  11 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE  12 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)                                  
KEYWDS    T4SS, LIPOPROTEIN, PROTEIN-PEPTIDE COMPLEX, VIRB9, VIRB7, PROTEIN     
KEYWDS   2 TRANSPORT-PROTEIN TRANSPORT COMPLEX                                  
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    L.C.OLIVEIRA,D.P.SOUZA,R.K.SALINAS,H.WIENK,R.BOELENS,S.C.FARAH        
REVDAT   5   20-NOV-24 2N01    1       REMARK                                   
REVDAT   4   01-MAY-24 2N01    1       REMARK SEQADV                            
REVDAT   3   19-OCT-16 2N01    1       JRNL                                     
REVDAT   2   12-OCT-16 2N01    1       JRNL                                     
REVDAT   1   09-SEP-15 2N01    0                                                
JRNL        AUTH   L.C.OLIVEIRA,D.P.SOUZA,G.U.OKA,F.D.LIMA,R.J.OLIVEIRA,        
JRNL        AUTH 2 D.C.FAVARO,H.WIENK,R.BOELENS,C.S.FARAH,R.K.SALINAS           
JRNL        TITL   VIRB7 AND VIRB9 INTERACTIONS ARE REQUIRED FOR THE ASSEMBLY   
JRNL        TITL 2 AND ANTIBACTERIAL ACTIVITY OF A TYPE IV SECRETION SYSTEM.    
JRNL        REF    STRUCTURE                     V.  24  1707 2016              
JRNL        REFN                   ISSN 0969-2126                               
JRNL        PMID   27594685                                                     
JRNL        DOI    10.1016/J.STR.2016.07.015                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CYANA 3.0, CNS                                       
REMARK   3   AUTHORS     : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA),           
REMARK   3                 BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ (CNS)   
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: RECALCULATION USING RECOORD SCRIPTS,      
REMARK   3  WATER REFINEMENT USING RECOORD SCRIPTS                              
REMARK   4                                                                      
REMARK   4 2N01 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAR-15.                  
REMARK 100 THE DEPOSITION ID IS D_1000104250.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 310                                
REMARK 210  PH                             : 5.0                                
REMARK 210  IONIC STRENGTH                 : 0.07                               
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 0.500 MM [U-99% 13C; U-99% 15N]    
REMARK 210                                   XAC_VIRB9CT, 1 MM XAC_VIRB7NT,     
REMARK 210                                   20 MM [U-100% 2H] SODIUM ACETATE,  
REMARK 210                                   50 MM SODIUM CHLORIDE, 1 %         
REMARK 210                                   SODIUM AZIDE, 90% H2O/10% D2O      
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-15N HSQC; 2D 1H-13C HSQC;    
REMARK 210                                   2D 1H-13C HSQC ALIPHATIC; 2D 1H-   
REMARK 210                                   13C HSQC AROMATIC; 2D 1H-1H        
REMARK 210                                   NOESY; 3D CBCA(CO)NH; 3D C(CO)NH;  
REMARK 210                                   3D HNCO; 3D HNCA; 3D H(CCO)NH;     
REMARK 210                                   3D HCCH-TOCSY; 3D 1H-13C NOESY     
REMARK 210                                   ALIPHATIC; 3D 1H-13C NOESY         
REMARK 210                                   AROMATIC; 3D CCH TOCSY; 3D         
REMARK 210                                   HNCACB; 3D 15N, 13C CNH-NOESY;     
REMARK 210                                   2D 13C15N FILTERED NOE; 2D 13C,    
REMARK 210                                   15N FILTERED TOCSY; 3D             
REMARK 210                                   HBCBCGCDHD; 3D 15N-EDITED NOESY;   
REMARK 210                                   3D 13C-EDITED NOESY; 3D HN(CO)CA;  
REMARK 210                                   3D HN(CA)CO; 3D HBCBCGCDCEHE       
REMARK 210  SPECTROMETER FIELD STRENGTH    : 800 MHZ; 900 MHZ                   
REMARK 210  SPECTROMETER MODEL             : AVANCE III                         
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : TALOS, NMRPIPE, CCPNMR ANALYSIS    
REMARK 210                                   2.4.1                              
REMARK 210   METHOD USED                   : SIMULATED ANNEALING, WATER         
REMARK 210                                   REFINEMENT IN CARTESIAN SPACE      
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LOWEST         
REMARK 210                                   ENERGY                             
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 1800 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 8780 ANGSTROM**2                        
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;                   
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                            
REMARK 465   MODELS 1-20                                                        
REMARK 465     RES C SSSEQI                                                     
REMARK 465     ACE A    23                                                      
REMARK 465     NH2 A    47                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 PRO A  26       31.65    -82.37                                   
REMARK 500  1 HIS A  39       90.89    -59.28                                   
REMARK 500  1 GLU A  42      -39.54   -167.66                                   
REMARK 500  1 THR A  45      -58.60   -153.88                                   
REMARK 500  1 HIS B 152      -55.58     73.19                                   
REMARK 500  1 LEU B 158     -167.33     58.89                                   
REMARK 500  1 LYS B 188      -42.11   -144.81                                   
REMARK 500  1 VAL B 220     -167.76     40.39                                   
REMARK 500  2 PRO A  28       98.42    -62.32                                   
REMARK 500  2 HIS A  39      -95.40     69.80                                   
REMARK 500  2 PHE A  40        9.41   -152.77                                   
REMARK 500  2 ASP A  41     -161.14   -112.91                                   
REMARK 500  2 GLU A  42       16.85   -143.43                                   
REMARK 500  2 THR A  45       74.39     40.24                                   
REMARK 500  2 MET B 153      -93.35     60.52                                   
REMARK 500  2 LEU B 158       75.66     60.18                                   
REMARK 500  2 ASP B 160     -159.27    172.26                                   
REMARK 500  2 LYS B 188      -42.48   -146.50                                   
REMARK 500  2 ASN B 203       27.87    -79.95                                   
REMARK 500  2 VAL B 220     -163.35     35.02                                   
REMARK 500  3 TRP A  34      100.32    -35.91                                   
REMARK 500  3 ASP A  41      -69.82   -152.62                                   
REMARK 500  3 ASN B 154       98.57     77.19                                   
REMARK 500  3 ALA B 155     -175.75     68.30                                   
REMARK 500  3 LYS B 159     -165.31   -106.13                                   
REMARK 500  3 LYS B 188      -45.08   -141.36                                   
REMARK 500  3 ASN B 203       36.01    -87.76                                   
REMARK 500  3 VAL B 220     -170.59     38.70                                   
REMARK 500  4 LYS A  25       83.38   -151.26                                   
REMARK 500  4 ASP A  29      -60.53     68.24                                   
REMARK 500  4 HIS A  39      -86.68     73.65                                   
REMARK 500  4 ASP A  41      -99.00   -107.97                                   
REMARK 500  4 ALA A  43       98.46     65.20                                   
REMARK 500  4 LYS B 159       75.34     32.03                                   
REMARK 500  4 ARG B 162     -138.92   -110.07                                   
REMARK 500  4 LYS B 188      -39.26   -142.34                                   
REMARK 500  4 ASN B 203       39.76    -87.43                                   
REMARK 500  4 VAL B 220     -165.13     35.79                                   
REMARK 500  5 ASP A  29      166.07     66.30                                   
REMARK 500  5 PHE A  40      121.14     72.47                                   
REMARK 500  5 ASP A  41     -153.15   -120.15                                   
REMARK 500  5 SER B 151      -83.29    -98.72                                   
REMARK 500  5 LYS B 188      -34.12   -155.18                                   
REMARK 500  5 ASP B 195       54.51    -95.07                                   
REMARK 500  5 THR B 201       -2.51     71.26                                   
REMARK 500  5 ASN B 203       48.27    -83.07                                   
REMARK 500  5 VAL B 220     -169.94     37.97                                   
REMARK 500  6 LYS A  25      100.27     72.17                                   
REMARK 500  6 ASN A  38       94.08    -68.23                                   
REMARK 500  6 HIS A  39      -81.27     70.25                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     177 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500  1 ARG B 198         0.07    SIDE CHAIN                              
REMARK 500  4 ARG B 210         0.07    SIDE CHAIN                              
REMARK 500  7 ARG B 251         0.10    SIDE CHAIN                              
REMARK 500 19 ARG B 251         0.08    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 2L4W   RELATED DB: PDB                                   
REMARK 900 NMR STRUCTURE OF VIRB7 FROM XANTHOMONAS CITRI                        
REMARK 900 RELATED ID: 25512   RELATED DB: BMRB                                 
DBREF  2N01 A   24    46  UNP    Q8PJB3   Q8PJB3_XANAC    24     46             
DBREF  2N01 B  154   255  UNP    Q8PJB5   Q8PJB5_XANAC   154    255             
SEQADV 2N01 ACE A   23  UNP  Q8PJB3              ACETYLATION                    
SEQADV 2N01 NH2 A   47  UNP  Q8PJB3              AMIDATION                      
SEQADV 2N01 GLY B  150  UNP  Q8PJB5              EXPRESSION TAG                 
SEQADV 2N01 SER B  151  UNP  Q8PJB5              EXPRESSION TAG                 
SEQADV 2N01 HIS B  152  UNP  Q8PJB5              EXPRESSION TAG                 
SEQADV 2N01 MET B  153  UNP  Q8PJB5              EXPRESSION TAG                 
SEQRES   1 A   25  ACE THR LYS PRO ALA PRO ASP PHE GLY GLY ARG TRP LYS          
SEQRES   2 A   25  HIS VAL ASN HIS PHE ASP GLU ALA PRO THR GLU NH2              
SEQRES   1 B  106  GLY SER HIS MET ASN ALA LYS ILE LEU LYS ASP ARG ARG          
SEQRES   2 B  106  TYR TYR TYR ASP TYR ASP TYR ALA THR ARG THR LYS LYS          
SEQRES   3 B  106  SER TRP LEU ILE PRO SER ARG VAL TYR ASP ASP GLY LYS          
SEQRES   4 B  106  PHE THR TYR ILE ASN MET ASP LEU THR ARG PHE PRO THR          
SEQRES   5 B  106  GLY ASN PHE PRO ALA VAL PHE ALA ARG GLU LYS GLU HIS          
SEQRES   6 B  106  ALA GLU ASP PHE LEU VAL ASN THR THR VAL GLU GLY ASN          
SEQRES   7 B  106  THR LEU ILE VAL HIS GLY THR TYR PRO PHE LEU VAL VAL          
SEQRES   8 B  106  ARG HIS GLY ASP ASN VAL VAL GLY LEU ARG ARG ASN LYS          
SEQRES   9 B  106  GLN LYS                                                      
HELIX    1   1 ASP B  195  PHE B  199  5                                   5    
SHEET    1   A 5 LYS A  35  HIS A  36  0                                        
SHEET    2   A 5 TYR B 167  THR B 171 -1  O  TYR B 169   N  LYS A  35           
SHEET    3   A 5 ASN B 245  ARG B 251 -1  O  GLY B 248   N  ALA B 170           
SHEET    4   A 5 PHE B 237  HIS B 242 -1  N  VAL B 240   O  VAL B 247           
SHEET    5   A 5 ALA B 206  ARG B 210 -1  N  PHE B 208   O  VAL B 239           
SHEET    1   B 5 TYR B 163  TYR B 164  0                                        
SHEET    2   B 5 ARG B 182  ASP B 186 -1  O  ASP B 185   N  TYR B 164           
SHEET    3   B 5 PHE B 189  ASN B 193 -1  O  TYR B 191   N  TYR B 184           
SHEET    4   B 5 THR B 228  HIS B 232 -1  O  VAL B 231   N  THR B 190           
SHEET    5   B 5 ASN B 221  GLU B 225 -1  N  THR B 223   O  ILE B 230           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1