HEADER HYDROLASE 01-APR-15 2N1H TITLE SOLUTION STRUCTURE OF THE GBII-BETA MRH DOMAIN W409A POINT MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSIDASE 2 SUBUNIT BETA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: MRH DOMAIN (UNP RESIDUES 380-473); COMPND 5 SYNONYM: ALPHA-GLUCOSIDASE 2 SUBUNIT BETA; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; SOURCE 3 ORGANISM_COMMON: FISSION YEAST; SOURCE 4 ORGANISM_TAXID: 284812; SOURCE 5 STRAIN: 972 / ATCC 24843; SOURCE 6 GENE: GTB1, GLS2-BETA, SPCC825.02; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21[PREP4]; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PQE KEYWDS HYDROLASE, LECTIN, MRH EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR L.J.OLSON,F.C.PETERSON,N.M.DAMHS REVDAT 3 20-NOV-24 2N1H 1 REMARK REVDAT 2 14-JUN-23 2N1H 1 SEQADV REVDAT 1 09-DEC-15 2N1H 0 JRNL AUTH L.J.OLSON,R.ORSI,F.C.PETERSON,A.J.PARODI,J.P.KIM, JRNL AUTH 2 C.D'ALESSIO,N.M.DAMHS JRNL TITL CRYSTAL STRUCTURE AND FUNCTIONAL ANALYSES OF GLUCOSDIDASE JRNL TITL 2 II'S LECTIN DOMAIN: INSGIHTS INTO OLIGOMANNOSE RECOGNITION. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT, P. ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2N1H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-APR-15. REMARK 100 THE DEPOSITION ID IS D_1000104302. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.1 REMARK 210 IONIC STRENGTH : 0.15 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.7 MM [U-99% 13C; U-99% 15N] REMARK 210 MRH GIIB, 10 MM [U-99% 2H] REMARK 210 IMIDAZOLE, 150 MM SODIUM REMARK 210 CHLORIDE, 0.02 % SODIUM AZIDE, REMARK 210 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 421 HZ2 LYS A 442 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 364 92.98 63.30 REMARK 500 1 PHE A 378 -55.03 74.56 REMARK 500 1 GLU A 380 -71.90 -122.25 REMARK 500 1 ASN A 381 -178.08 -172.77 REMARK 500 1 ASP A 385 -79.41 70.31 REMARK 500 1 SER A 386 -1.12 -140.55 REMARK 500 1 ALA A 409 -36.37 70.27 REMARK 500 1 CYS A 422 155.33 70.64 REMARK 500 1 LYS A 436 82.16 -43.10 REMARK 500 1 SER A 445 141.09 -173.51 REMARK 500 2 ALA A 359 -72.21 66.19 REMARK 500 2 MET A 363 81.38 60.04 REMARK 500 2 GLU A 364 -38.39 -152.18 REMARK 500 2 PHE A 378 125.97 66.66 REMARK 500 2 TYR A 379 -33.23 72.58 REMARK 500 2 GLU A 380 -76.45 -77.50 REMARK 500 2 ASN A 381 -174.99 179.15 REMARK 500 2 ASP A 385 -76.94 69.52 REMARK 500 2 SER A 386 -2.26 -142.18 REMARK 500 2 LEU A 389 -77.88 -69.86 REMARK 500 2 ASN A 410 -54.02 -128.84 REMARK 500 2 CYS A 422 152.75 62.42 REMARK 500 2 LYS A 436 85.02 -49.19 REMARK 500 3 MET A 363 37.06 -84.27 REMARK 500 3 GLU A 380 -71.32 -116.77 REMARK 500 3 ASN A 381 173.73 177.90 REMARK 500 3 ASP A 385 -75.35 70.37 REMARK 500 3 ASN A 404 39.51 71.98 REMARK 500 3 ALA A 409 -164.95 -170.17 REMARK 500 3 CYS A 422 138.59 68.07 REMARK 500 3 LYS A 436 86.68 -45.58 REMARK 500 4 PHE A 378 -61.68 75.07 REMARK 500 4 GLU A 380 -70.94 -108.13 REMARK 500 4 ASN A 381 -177.30 -178.59 REMARK 500 4 ASP A 385 -76.04 69.99 REMARK 500 4 ALA A 409 135.08 71.15 REMARK 500 4 ASN A 410 -33.48 74.74 REMARK 500 4 HIS A 413 128.34 69.01 REMARK 500 4 CYS A 422 136.35 69.42 REMARK 500 4 LYS A 436 59.63 35.57 REMARK 500 5 ALA A 359 -173.50 65.43 REMARK 500 5 PHE A 378 -56.22 75.67 REMARK 500 5 GLU A 380 -73.26 -89.13 REMARK 500 5 ASN A 381 -171.11 -178.44 REMARK 500 5 ASP A 385 -79.15 68.16 REMARK 500 5 ALA A 409 124.33 -170.67 REMARK 500 5 ASN A 410 -49.25 70.84 REMARK 500 5 CYS A 422 154.23 71.81 REMARK 500 5 LYS A 436 81.75 -48.64 REMARK 500 5 CYS A 449 85.45 -67.46 REMARK 500 REMARK 500 THIS ENTRY HAS 202 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25560 RELATED DB: BMRB REMARK 900 RELATED ID: 4XQM RELATED DB: PDB DBREF 2N1H A 357 450 UNP Q9USH8 GLU2B_SCHPO 380 473 SEQADV 2N1H ALA A 409 UNP Q9USH8 TRP 432 ENGINEERED MUTATION SEQRES 1 A 94 TYR ARG ALA ILE LYS GLY MET GLU THR LYS ARG GLU ILE SEQRES 2 A 94 GLY GLY TYR THR TYR LYS VAL VAL PHE TYR GLU ASN VAL SEQRES 3 A 94 PHE GLN ASP SER ILE LEU LEU GLY ASN PHE ALA SER GLN SEQRES 4 A 94 GLU GLY ASN VAL LEU LYS TYR GLU ASN GLY GLN SER CYS SEQRES 5 A 94 ALA ASN GLY PRO HIS ARG SER ALA ILE VAL THR VAL GLU SEQRES 6 A 94 CYS GLY VAL GLU ASN GLU ILE VAL SER VAL LEU GLU ALA SEQRES 7 A 94 GLN LYS CYS GLU TYR LEU ILE LYS MET LYS SER PRO ALA SEQRES 8 A 94 ALA CYS SER HELIX 1 1 SER A 445 CYS A 449 5 5 SHEET 1 A 8 THR A 365 ILE A 369 0 SHEET 2 A 8 TYR A 372 VAL A 376 -1 O VAL A 376 N THR A 365 SHEET 3 A 8 ASN A 381 GLN A 384 -1 O PHE A 383 N LYS A 375 SHEET 4 A 8 ILE A 387 GLU A 396 -1 O ILE A 387 N GLN A 384 SHEET 5 A 8 VAL A 399 ASN A 404 -1 O VAL A 399 N GLU A 396 SHEET 6 A 8 SER A 415 VAL A 420 -1 O ALA A 416 N TYR A 402 SHEET 7 A 8 GLU A 438 LYS A 444 1 O ILE A 441 N THR A 419 SHEET 8 A 8 GLU A 427 GLN A 435 -1 N LEU A 432 O LEU A 440 SSBOND 1 CYS A 408 CYS A 437 1555 1555 2.03 SSBOND 2 CYS A 422 CYS A 449 1555 1555 2.01 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1