HEADER IMMUNE SYSTEM 19-MAY-15 2N31 TITLE TOM1 NEGATIVELY MODULATES BINDING OF TOLLIP TO PHOSPHATIDYLINOSITOL 3- TITLE 2 PHOSPHATE VIA A COUPLED FOLDING AND BINDING MECHANISM COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLL INTERACTING PROTEIN VARIANT; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 32-53; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PGEX-6P-1 KEYWDS IMMUNE SYSTEM EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.XIAO,G.ARMSTRONG,D.CAPELLUTO REVDAT 3 14-JUN-23 2N31 1 REMARK SEQADV REVDAT 2 21-OCT-15 2N31 1 JRNL REVDAT 1 16-SEP-15 2N31 0 JRNL AUTH S.XIAO,M.K.BRANNON,X.ZHAO,K.I.FREAD,J.F.ELLENA, JRNL AUTH 2 J.H.BUSHWELLER,C.V.FINKIELSTEIN,G.S.ARMSTRONG,D.G.CAPELLUTO JRNL TITL TOM1 MODULATES BINDING OF TOLLIP TO PHOSPHATIDYLINOSITOL JRNL TITL 2 3-PHOSPHATE VIA A COUPLED FOLDING AND BINDING MECHANISM. JRNL REF STRUCTURE V. 23 1910 2015 JRNL REFN ISSN 0969-2126 JRNL PMID 26320582 JRNL DOI 10.1016/J.STR.2015.07.017 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ROSETTA, ROSETTA REMARK 3 AUTHORS : SHEN, VERNON, BAKER AND BAX (ROSETTA), SHEN, REMARK 3 VERNON, BAKER AND BAX (ROSETTA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2N31 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000104358. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 70 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.8-1.0 MM [U-99% 13C; U-99% REMARK 210 15N] TBD, 1.0-1.2 MM GAT, 50 UM REMARK 210 DSS, 20 MM [U-2H] TRIS, 50 MM REMARK 210 POTASSIUM CHLORIDE, 1 MM [U-2H] REMARK 210 DTT, 1 MM SODIUM AZIDE, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HN(CA)CO; 3D HNCACB; 3D CBCA(CO) REMARK 210 NH; 3D 1H-15N NOESY; 3D 1H-15N REMARK 210 TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : DD2; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ROSETTA, NMRDRAW, PSVS, SPARKY, REMARK 210 TALOS, TOPSPIN, SHEN, VERNON, REMARK 210 BAKER AND BAX REMARK 210 METHOD USED : DISTANCE GEOMETRY, SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 500 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 ARG A 23 REMARK 465 ILE A 24 REMARK 465 THR A 25 REMARK 465 PRO A 26 REMARK 465 THR A 27 REMARK 465 GLN A 28 REMARK 465 GLN A 29 REMARK 465 GLN A 30 REMARK 465 ARG A 31 REMARK 465 GLN A 32 REMARK 465 VAL A 33 REMARK 465 GLN A 34 REMARK 465 LEU A 35 REMARK 465 ASP A 36 REMARK 465 ALA A 37 REMARK 465 GLN A 38 REMARK 465 ALA A 39 REMARK 465 ALA A 40 REMARK 465 GLN A 41 REMARK 465 GLN A 42 REMARK 465 LEU A 43 REMARK 465 GLN A 44 REMARK 465 TYR A 45 REMARK 465 GLY A 46 REMARK 465 GLY A 47 REMARK 465 ALA A 48 REMARK 465 VAL A 49 REMARK 465 GLY A 50 REMARK 465 THR A 51 REMARK 465 VAL A 52 REMARK 465 GLY A 53 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 6 GLN A 19 -57.60 -131.99 REMARK 500 8 THR A 7 -159.09 -115.06 REMARK 500 9 THR A 7 -162.98 -114.19 REMARK 500 9 GLN A 19 -58.10 -132.30 REMARK 500 11 GLN A 19 -58.36 -133.25 REMARK 500 12 GLN A 19 -57.59 -131.88 REMARK 500 15 GLN A 19 -57.79 -132.04 REMARK 500 16 GLN A 19 -57.83 -132.10 REMARK 500 17 GLN A 19 -58.25 -132.26 REMARK 500 18 GLN A 19 -57.70 -132.10 REMARK 500 19 GLN A 19 -57.72 -133.02 REMARK 500 20 GLN A 19 -57.58 -132.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25632 RELATED DB: BMRB DBREF 2N31 A 1 53 UNP Q59FB9 Q59FB9_HUMAN 32 84 SEQADV 2N31 GLY A -4 UNP Q59FB9 EXPRESSION TAG SEQADV 2N31 PRO A -3 UNP Q59FB9 EXPRESSION TAG SEQADV 2N31 LEU A -2 UNP Q59FB9 EXPRESSION TAG SEQADV 2N31 GLY A -1 UNP Q59FB9 EXPRESSION TAG SEQADV 2N31 SER A 0 UNP Q59FB9 EXPRESSION TAG SEQRES 1 A 58 GLY PRO LEU GLY SER MET ALA THR THR VAL SER THR GLN SEQRES 2 A 58 ARG GLY PRO VAL TYR ILE GLY GLU LEU PRO GLN ASP PHE SEQRES 3 A 58 LEU ARG ILE THR PRO THR GLN GLN GLN ARG GLN VAL GLN SEQRES 4 A 58 LEU ASP ALA GLN ALA ALA GLN GLN LEU GLN TYR GLY GLY SEQRES 5 A 58 ALA VAL GLY THR VAL GLY SHEET 1 A 2 VAL A 5 THR A 7 0 SHEET 2 A 2 GLY A 10 VAL A 12 -1 O VAL A 12 N VAL A 5 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1