HEADER MEMBRANE PROTEIN 27-AUG-15 2N6P TITLE SOLUTION NMR STRUCTURE OF OUTER MEMBRANE PROTEIN G P92A MUTANT FROM TITLE 2 PSEUDOMONAS AERUGINOSA CAVEAT 2N6P CHIRALITY ERROR ON ATOM CG OF RESIDUE LEU A 27. COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER MEMBRANE PROTEIN OPRG; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 27-232; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228; SOURCE 5 GENE: 879793, OPRG, PA4067; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET30A+ KEYWDS MEMBRANE PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR I.KUCHARSKA,P.SEELHEIM,T.C.EDRINGTON,B.LIANG,L.K.TAMM REVDAT 3 15-MAY-24 2N6P 1 REMARK REVDAT 2 14-JUN-23 2N6P 1 REMARK SEQADV REVDAT 1 30-DEC-15 2N6P 0 JRNL AUTH I.KUCHARSKA,P.SEELHEIM,T.EDRINGTON,B.LIANG,L.K.TAMM JRNL TITL OPRG HARNESSES THE DYNAMICS OF ITS EXTRACELLULAR LOOPS TO JRNL TITL 2 TRANSPORT SMALL AMINO ACIDS ACROSS THE OUTER MEMBRANE OF JRNL TITL 3 PSEUDOMONAS AERUGINOSA. JRNL REF STRUCTURE V. 23 2234 2015 JRNL REFN ISSN 0969-2126 JRNL PMID 26655471 JRNL DOI 10.1016/J.STR.2015.10.009 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TALOS TALOS+, CNS 1.2 REMARK 3 AUTHORS : YANG SHEN, FRANK DELAGLIO, GABRIEL CORNILESCU, AND REMARK 3 AD BAX (TALOS), BRUNGER, A.T. ET AL. (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2N6P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000104490. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 318 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-13C; U-15N; U-2H] REMARK 210 PROTEIN, 25 MM SODIUM PHOSPHATE, 50 MM POTASSIUM CHLORIDE, 0.05 % REMARK 210 SODIUM AZIDE, 0.9 % 1,2-DIHEXANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, REMARK 210 90% H2O/10% D2O; 1 MM [U-13C; U-15N; U-2H] PROTEIN, 25 MM SODIUM REMARK 210 PHOSPHATE, 50 MM POTASSIUM CHLORIDE, 0.05 % SODIUM AZIDE, 0.9 % REMARK 210 1,2-DIHEXANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 100% D2O; 1 MM REMARK 210 PROTEIN, 25 MM SODIUM PHOSPHATE, 50 MM POTASSIUM CHLORIDE, 0.05 % REMARK 210 SODIUM AZIDE, 0.9 % 1,2-DIHEXANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, REMARK 210 90% H2O/10% D2O; 1 MM PROTEIN, 25 MM SODIUM PHOSPHATE, 50 MM REMARK 210 POTASSIUM CHLORIDE, 0.05 % SODIUM AZIDE, 0.9 % 1,2-DIHEXANOYL-SN- REMARK 210 GLYCERO-3-PHOSPHOCHOLINE, 90% H2O/10% D2O; 1 MM PROTEIN, 25 MM REMARK 210 SODIUM PHOSPHATE, 50 MM POTASSIUM CHLORIDE, 0.05 % SODIUM AZIDE, REMARK 210 0.9 % 1,2-DIHEXANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 90% H2O/10% REMARK 210 D2O; 1 MM PROTEIN, 25 MM SODIUM PHOSPHATE, 50 MM POTASSIUM REMARK 210 CHLORIDE, 0.05 % SODIUM AZIDE, 0.9 % 1,2-DIHEXANOYL-SN-GLYCERO-3- REMARK 210 PHOSPHOCHOLINE, 90% H2O/10% D2O; 1 MM [U-15N]-LEU PROTEIN, 25 MM REMARK 210 SODIUM PHOSPHATE, 50 MM POTASSIUM CHLORIDE, 0.05 % SODIUM AZIDE, REMARK 210 0.9 % 1,2-DIHEXANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H 15N TROSY; 3D HNCO; 3D REMARK 210 HNCA; 3D HNCB; 3D HNCA(CO); 3D REMARK 210 15N 1H 1H NOESY TROSY; 4D 15N 1H REMARK 210 15N HSQC NOESY HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : BRUKER AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, CNS 1.2, BRUKER_TOPSPIN REMARK 210 2.1.6, NMRPIPE REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 HIS A 211 REMARK 465 HIS A 212 REMARK 465 HIS A 213 REMARK 465 HIS A 214 REMARK 465 HIS A 215 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 2 -48.47 -142.12 REMARK 500 1 ALA A 14 95.34 60.32 REMARK 500 1 ASP A 20 -60.37 -97.20 REMARK 500 1 LEU A 27 30.34 -98.31 REMARK 500 1 ASP A 28 79.81 -113.19 REMARK 500 1 GLN A 32 -59.75 -166.47 REMARK 500 1 ARG A 33 134.16 63.63 REMARK 500 1 ALA A 37 99.15 60.50 REMARK 500 1 ASP A 55 -63.32 78.66 REMARK 500 1 LYS A 56 41.88 159.71 REMARK 500 1 LEU A 76 -42.86 -175.03 REMARK 500 1 PRO A 78 -172.23 -54.24 REMARK 500 1 LEU A 84 -46.76 -133.95 REMARK 500 1 ASP A 86 164.53 60.36 REMARK 500 1 TYR A 99 78.51 -106.40 REMARK 500 1 THR A 104 -170.72 -171.12 REMARK 500 1 ASP A 123 159.26 60.78 REMARK 500 1 LEU A 126 -54.55 -146.07 REMARK 500 1 SER A 128 -36.59 -179.63 REMARK 500 1 ASN A 129 42.44 -92.21 REMARK 500 1 ASP A 142 36.26 -152.44 REMARK 500 1 HIS A 159 -35.62 -135.14 REMARK 500 1 MET A 169 103.12 -165.08 REMARK 500 1 LYS A 174 39.78 -96.80 REMARK 500 1 SER A 181 31.17 -167.22 REMARK 500 1 ALA A 182 82.02 179.49 REMARK 500 1 THR A 188 31.85 -164.73 REMARK 500 1 ASP A 191 -173.24 48.79 REMARK 500 2 HIS A 2 -52.76 -128.60 REMARK 500 2 ASP A 19 30.85 -160.43 REMARK 500 2 ARG A 33 -79.19 64.17 REMARK 500 2 LYS A 36 85.40 60.13 REMARK 500 2 SER A 41 -61.11 -130.38 REMARK 500 2 ASP A 55 -61.05 78.93 REMARK 500 2 LYS A 56 40.33 159.77 REMARK 500 2 PHE A 67 33.48 -162.11 REMARK 500 2 ASN A 68 -60.76 -94.33 REMARK 500 2 LEU A 76 83.52 61.01 REMARK 500 2 PRO A 78 175.29 -53.94 REMARK 500 2 LEU A 80 87.75 60.30 REMARK 500 2 ASP A 86 68.48 60.91 REMARK 500 2 GLN A 89 -167.97 -71.31 REMARK 500 2 ASP A 123 -55.67 -160.31 REMARK 500 2 SER A 128 -67.89 -159.20 REMARK 500 2 LEU A 140 -71.43 66.42 REMARK 500 2 GLN A 141 -78.48 63.54 REMARK 500 2 ASN A 157 -0.43 72.96 REMARK 500 2 HIS A 159 -36.87 -134.41 REMARK 500 2 LYS A 174 -46.50 -134.83 REMARK 500 2 SER A 176 90.68 60.07 REMARK 500 REMARK 500 THIS ENTRY HAS 591 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2N6L RELATED DB: PDB REMARK 900 RELATED ID: 25776 RELATED DB: BMRB DBREF 2N6P A 2 207 UNP Q9HWW1 Q9HWW1_PSEAE 27 232 SEQADV 2N6P MET A 1 UNP Q9HWW1 INITIATING METHIONINE SEQADV 2N6P ALA A 92 UNP Q9HWW1 PRO 117 ENGINEERED MUTATION SEQADV 2N6P LEU A 208 UNP Q9HWW1 EXPRESSION TAG SEQADV 2N6P GLU A 209 UNP Q9HWW1 EXPRESSION TAG SEQADV 2N6P HIS A 210 UNP Q9HWW1 EXPRESSION TAG SEQADV 2N6P HIS A 211 UNP Q9HWW1 EXPRESSION TAG SEQADV 2N6P HIS A 212 UNP Q9HWW1 EXPRESSION TAG SEQADV 2N6P HIS A 213 UNP Q9HWW1 EXPRESSION TAG SEQADV 2N6P HIS A 214 UNP Q9HWW1 EXPRESSION TAG SEQADV 2N6P HIS A 215 UNP Q9HWW1 EXPRESSION TAG SEQRES 1 A 215 MET HIS LYS ALA GLY ASP PHE ILE ILE ARG GLY GLY PHE SEQRES 2 A 215 ALA THR VAL ASP PRO ASP ASP SER SER SER ASP ILE LYS SEQRES 3 A 215 LEU ASP GLY ALA LYS GLN ARG GLY THR LYS ALA THR VAL SEQRES 4 A 215 ASP SER ASP THR GLN LEU GLY LEU THR PHE THR TYR MET SEQRES 5 A 215 PHE ALA ASP LYS TRP GLY VAL GLU LEU VAL ALA ALA THR SEQRES 6 A 215 PRO PHE ASN HIS GLN VAL ASP VAL LYS GLY LEU GLY PRO SEQRES 7 A 215 GLY LEU ASP GLY LYS LEU ALA ASP ILE LYS GLN LEU PRO SEQRES 8 A 215 ALA THR LEU LEU LEU GLN TYR TYR PRO MET GLY GLY THR SEQRES 9 A 215 ASN SER ALA PHE GLN PRO TYR GLY GLY LEU GLY VAL ASN SEQRES 10 A 215 TYR THR THR PHE PHE ASP GLU ASP LEU ALA SER ASN ARG SEQRES 11 A 215 LYS ALA GLN GLY PHE SER SER MET LYS LEU GLN ASP SER SEQRES 12 A 215 TRP GLY LEU ALA GLY GLU LEU GLY PHE ASP TYR MET LEU SEQRES 13 A 215 ASN GLU HIS ALA LEU PHE ASN MET ALA VAL TRP TYR MET SEQRES 14 A 215 ASP ILE ASP THR LYS ALA SER ILE ASN GLY PRO SER ALA SEQRES 15 A 215 LEU GLY VAL ASN LYS THR LYS VAL ASP VAL ASP VAL ASP SEQRES 16 A 215 PRO TRP VAL TYR MET ILE GLY PHE GLY TYR LYS PHE LEU SEQRES 17 A 215 GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 ASN A 129 GLY A 134 1 6 SHEET 1 A 9 ASP A 6 GLY A 12 0 SHEET 2 A 9 GLY A 46 PHE A 53 -1 O THR A 50 N ILE A 8 SHEET 3 A 9 TRP A 57 ALA A 63 -1 O TRP A 57 N PHE A 53 SHEET 4 A 9 ALA A 92 TYR A 98 -1 O GLN A 97 N GLY A 58 SHEET 5 A 9 TYR A 111 TYR A 118 -1 O GLY A 112 N TYR A 98 SHEET 6 A 9 GLY A 145 ASP A 153 -1 O ALA A 147 N GLY A 115 SHEET 7 A 9 LEU A 161 ASP A 170 -1 O MET A 164 N PHE A 152 SHEET 8 A 9 MET A 200 LYS A 206 -1 O MET A 200 N ALA A 165 SHEET 9 A 9 ASP A 6 GLY A 12 -1 N GLY A 11 O PHE A 203 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1