HEADER ANTIMICROBIAL PROTEIN 04-NOV-15 2N92 TITLE SOLUTION STRUCTURE OF CECROPIN P1 WITH LPS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CECROPIN-P1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 14-44; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASCARIS SUUM; SOURCE 3 ORGANISM_COMMON: PIG ROUNDWORM; SOURCE 4 ORGANISM_TAXID: 6253; SOURCE 5 GENE: ASCEC-1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET32A KEYWDS ANTIMICROBIAL PEPTIDE, LIPOPOLYSACCHARIDE, ANTIMICROBIAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.BAEK,M.KAMIYA,T.KUSHIBIKI,T.NAKAZUMI,S.TOMISAWA,C.ABE,Y.KUMAKI, AUTHOR 2 T.KIKUKAWA,M.DEMURA,K.KAWANO,T.AIZAWA REVDAT 2 01-MAY-24 2N92 1 REMARK REVDAT 1 09-NOV-16 2N92 0 JRNL AUTH M.BAEK,M.KAMIYA,T.KUSHIBIKI,T.NAKAZUMI,S.TOMISAWA,C.ABE, JRNL AUTH 2 Y.KUMAKI,T.KIKUKAWA,M.DEMURA,K.KAWANO,T.AIZAWA JRNL TITL LIPOPOLYSACCHARIDE BOUND STRUCTURE OF ANTIMICROBIAL PEPTIDE JRNL TITL 2 CECROPIN P1 BY NMR SPECTROSCOPY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA, CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2N92 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000104575. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM CP1-1, 90% H2O/10% D2O; 1 REMARK 210 MM [U-13C; U-15N] CP1-2, 90% H2O/ REMARK 210 10% D2O; 1 MM [U-15N] CP1-3, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 2D 1H-1H TOCSY; 2D 1H-1H COSY; REMARK 210 3D CBCA(CO)NH; 3D C(CO)NH; 3D REMARK 210 HNCA; 3D HNCACB; 3D 1H-15N NOESY; REMARK 210 3D 1H-15N TOCSY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 TRP A 2 176.61 61.54 REMARK 500 1 LEU A 3 -173.69 59.66 REMARK 500 1 ALA A 7 21.45 -154.18 REMARK 500 1 LYS A 9 41.30 -179.45 REMARK 500 1 LEU A 10 -42.19 -142.57 REMARK 500 1 GLU A 11 91.48 54.92 REMARK 500 2 SER A 4 -73.33 -161.67 REMARK 500 2 LYS A 9 41.10 -179.31 REMARK 500 2 GLU A 11 165.65 179.89 REMARK 500 2 ASN A 12 -74.59 -77.11 REMARK 500 3 TRP A 2 56.54 -110.11 REMARK 500 3 THR A 6 39.65 -150.99 REMARK 500 3 LYS A 9 41.28 -179.25 REMARK 500 3 GLU A 11 168.85 63.17 REMARK 500 4 LEU A 3 -74.69 69.16 REMARK 500 4 SER A 4 81.59 54.89 REMARK 500 4 LYS A 5 109.05 -54.16 REMARK 500 4 ALA A 7 20.18 -149.42 REMARK 500 4 LYS A 9 41.26 -179.13 REMARK 500 4 LEU A 10 17.33 -145.05 REMARK 500 4 GLU A 11 -74.71 -51.79 REMARK 500 4 ASN A 12 -75.51 -176.38 REMARK 500 5 TRP A 2 -61.64 -166.76 REMARK 500 5 SER A 4 86.30 55.06 REMARK 500 5 LYS A 9 41.34 -179.44 REMARK 500 5 LEU A 10 51.14 -148.14 REMARK 500 5 GLU A 11 100.12 179.93 REMARK 500 6 SER A 4 107.03 -161.70 REMARK 500 6 THR A 6 118.19 -170.97 REMARK 500 6 ALA A 7 21.10 -147.37 REMARK 500 6 LYS A 9 40.64 -179.55 REMARK 500 6 LEU A 10 69.02 -155.63 REMARK 500 6 GLU A 11 -75.67 -160.01 REMARK 500 6 ASN A 12 -75.17 179.98 REMARK 500 7 ALA A 7 22.22 -155.55 REMARK 500 7 LYS A 9 40.95 -179.27 REMARK 500 7 LEU A 10 20.55 -152.48 REMARK 500 7 GLU A 11 104.67 -51.81 REMARK 500 8 SER A 4 40.23 -154.64 REMARK 500 8 ALA A 7 20.66 -140.88 REMARK 500 8 LYS A 9 39.41 -172.63 REMARK 500 8 GLU A 11 -57.28 179.96 REMARK 500 8 ASN A 12 -75.67 69.28 REMARK 500 9 SER A 4 77.36 53.27 REMARK 500 9 LYS A 9 41.77 -178.98 REMARK 500 9 GLU A 11 108.27 -51.58 REMARK 500 9 SER A 13 38.78 -179.67 REMARK 500 10 SER A 4 -74.30 -54.43 REMARK 500 10 THR A 6 79.41 -165.34 REMARK 500 10 LYS A 9 41.23 -179.18 REMARK 500 REMARK 500 THIS ENTRY HAS 109 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25877 RELATED DB: BMRB DBREF 2N92 A 1 31 UNP P14661 CECP1_ASCSU 14 44 SEQRES 1 A 31 SER TRP LEU SER LYS THR ALA LYS LYS LEU GLU ASN SER SEQRES 2 A 31 ALA LYS LYS ARG ILE SER GLU GLY ILE ALA ILE ALA ILE SEQRES 3 A 31 GLN GLY GLY PRO ARG HELIX 1 1 SER A 13 GLY A 28 1 16 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1