data_2NP2 # _entry.id 2NP2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2NP2 pdb_00002np2 10.2210/pdb2np2/pdb NDB PD0903 ? ? RCSB RCSB040129 ? ? WWPDB D_1000040129 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1IHF ;E. Coli IHF bound to nicked H' DNA ; unspecified PDB 1P78 'Anabaena HU bound to AHU2 DNA' unspecified PDB 1P71 'Anabaena HU bound to TR3 DNA' unspecified PDB 1P51 'Anabaena HU bound to AHU6 DNA' unspecified PDB 1B8Z 'Thermatoga maritima HU protein alone' unspecified PDB 1OWF ;Mutant IHF (betaE44A) bound to nicked H' DNA ; unspecified # _pdbx_database_status.entry_id 2NP2 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-10-26 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rice, P.A.' 1 'Mouw, K.W.' 2 # _citation.id primary _citation.title 'Shaping the Borrelia burgdorferi genome: crystal structure and binding properties of the DNA-bending protein Hbb.' _citation.journal_abbrev Mol.Microbiol. _citation.journal_volume 63 _citation.page_first 1319 _citation.page_last 1330 _citation.year 2007 _citation.journal_id_ASTM MOMIEE _citation.country UK _citation.journal_id_ISSN 0950-382X _citation.journal_id_CSD 2007 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17244195 _citation.pdbx_database_id_DOI 10.1111/j.1365-2958.2007.05586.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mouw, K.W.' 1 ? primary 'Rice, P.A.' 2 ? # _cell.entry_id 2NP2 _cell.length_a 59.270 _cell.length_b 88.320 _cell.length_c 96.570 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2NP2 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 36-MER 11062.185 2 ? ? ? ? 2 polymer man Hbb 12694.740 2 ? ? ? ? 3 water nat water 18.015 32 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DG)(DT)(DA)(DT)(DT)(DT)(DA)(DA)(DT)(DA)(DC)(DT)(DA)(DT)(DA)(DT)(DG)(DT)(DC)(DA) (DT)(DA)(DT)(DA)(DG)(DT)(DA)(DT)(DT)(DA)(DA)(DA)(DT)(DA)(DC)(DT) ; GTATTTAATACTATATGTCATATAGTATTAAATACT C,D ? 2 'polypeptide(L)' no no ;MSFSRRPKVTKSDIVDQIALNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSFGTFEVRKRKGRLNARNPQTG EYVKVLDHHVAYFRPGKDLKERVWGIKG ; ;MSFSRRPKVTKSDIVDQIALNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSFGTFEVRKRKGRLNARNPQTG EYVKVLDHHVAYFRPGKDLKERVWGIKG ; A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DT n 1 3 DA n 1 4 DT n 1 5 DT n 1 6 DT n 1 7 DA n 1 8 DA n 1 9 DT n 1 10 DA n 1 11 DC n 1 12 DT n 1 13 DA n 1 14 DT n 1 15 DA n 1 16 DT n 1 17 DG n 1 18 DT n 1 19 DC n 1 20 DA n 1 21 DT n 1 22 DA n 1 23 DT n 1 24 DA n 1 25 DG n 1 26 DT n 1 27 DA n 1 28 DT n 1 29 DT n 1 30 DA n 1 31 DA n 1 32 DA n 1 33 DT n 1 34 DA n 1 35 DC n 1 36 DT n 2 1 MET n 2 2 SER n 2 3 PHE n 2 4 SER n 2 5 ARG n 2 6 ARG n 2 7 PRO n 2 8 LYS n 2 9 VAL n 2 10 THR n 2 11 LYS n 2 12 SER n 2 13 ASP n 2 14 ILE n 2 15 VAL n 2 16 ASP n 2 17 GLN n 2 18 ILE n 2 19 ALA n 2 20 LEU n 2 21 ASN n 2 22 ILE n 2 23 LYS n 2 24 ASN n 2 25 ASN n 2 26 ASN n 2 27 LEU n 2 28 LYS n 2 29 LEU n 2 30 GLU n 2 31 LYS n 2 32 LYS n 2 33 TYR n 2 34 ILE n 2 35 ARG n 2 36 LEU n 2 37 VAL n 2 38 ILE n 2 39 ASP n 2 40 ALA n 2 41 PHE n 2 42 PHE n 2 43 GLU n 2 44 GLU n 2 45 LEU n 2 46 LYS n 2 47 SER n 2 48 ASN n 2 49 LEU n 2 50 CYS n 2 51 SER n 2 52 ASN n 2 53 ASN n 2 54 VAL n 2 55 ILE n 2 56 GLU n 2 57 PHE n 2 58 ARG n 2 59 SER n 2 60 PHE n 2 61 GLY n 2 62 THR n 2 63 PHE n 2 64 GLU n 2 65 VAL n 2 66 ARG n 2 67 LYS n 2 68 ARG n 2 69 LYS n 2 70 GLY n 2 71 ARG n 2 72 LEU n 2 73 ASN n 2 74 ALA n 2 75 ARG n 2 76 ASN n 2 77 PRO n 2 78 GLN n 2 79 THR n 2 80 GLY n 2 81 GLU n 2 82 TYR n 2 83 VAL n 2 84 LYS n 2 85 VAL n 2 86 LEU n 2 87 ASP n 2 88 HIS n 2 89 HIS n 2 90 VAL n 2 91 ALA n 2 92 TYR n 2 93 PHE n 2 94 ARG n 2 95 PRO n 2 96 GLY n 2 97 LYS n 2 98 ASP n 2 99 LEU n 2 100 LYS n 2 101 GLU n 2 102 ARG n 2 103 VAL n 2 104 TRP n 2 105 GLY n 2 106 ILE n 2 107 LYS n 2 108 GLY n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Lyme disease spirochete' _entity_src_gen.gene_src_genus Borrelia _entity_src_gen.pdbx_gene_src_gene hbb _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Borrelia burgdorferi' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 139 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q3I4Z2_BORBU Q3I4Z2 2 ;MSFSRRPKVTKSDIVDQIALNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSFGTFEVRKRKGRLNARNPQTG EYVKVLDHHVAYFRPGKDLKERVWGIKG ; 1 ? 2 PDB 2NP2 2NP2 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2NP2 A 1 ? 108 ? Q3I4Z2 1 ? 108 ? 1 108 2 1 2NP2 B 1 ? 108 ? Q3I4Z2 1 ? 108 ? 1 108 3 2 2NP2 C 1 ? 36 ? 2NP2 203 ? 238 ? 203 238 4 2 2NP2 D 1 ? 36 ? 2NP2 203 ? 238 ? 203 238 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2NP2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.62 _exptl_crystal.density_percent_sol 53.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details ;100 mM TRIS (pH 7.5), 10 mM dithiothreitol (DTT), 1% Jeffamine (Hampton Research), 50 mM KCl, 20% glycerol, 15-20% PEG5000MME, VAPOR DIFFUSION, HANGING DROP, temperature 292K ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 TRIS ? ? ? 1 2 1 'dithiothreitol (DTT)' ? ? ? 1 3 1 Jeffamine ? ? ? 1 4 1 KCl ? ? ? 1 5 1 glycerol ? ? ? 1 6 1 PEG5000MME ? ? ? 1 7 1 H2O ? ? ? 1 8 2 TRIS ? ? ? 1 9 2 'dithiothreitol (DTT)' ? ? ? 1 10 2 Jeffamine ? ? ? 1 11 2 KCl ? ? ? 1 12 2 glycerol ? ? ? 1 13 2 PEG5000MME ? ? ? 1 14 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2005-06-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength 0.979 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2NP2 _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 3.02 _reflns.number_obs 8945 _reflns.number_all 8945 _reflns.percent_possible_obs 85 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.33 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.1 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.02 _reflns_shell.d_res_low 3.25 _reflns_shell.percent_possible_all 79.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.73 _reflns_shell.pdbx_redundancy 4.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2NP2 _refine.ls_number_reflns_obs 8334 _refine.ls_number_reflns_all 8334 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 71827.48 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.33 _refine.ls_d_res_high 3.02 _refine.ls_percent_reflns_obs 78.5 _refine.ls_R_factor_obs 0.235 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.235 _refine.ls_R_factor_R_free 0.276 _refine.ls_R_factor_R_free_error 0.013 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.4 _refine.ls_number_reflns_R_free 454 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 45.0 _refine.aniso_B[1][1] -2.63 _refine.aniso_B[2][2] -4.13 _refine.aniso_B[3][3] 6.76 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.328193 _refine.solvent_model_param_bsol 26.3307 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB entry: 1IHF' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2NP2 _refine_analyze.Luzzati_coordinate_error_obs 0.42 _refine_analyze.Luzzati_sigma_a_obs 0.33 _refine_analyze.Luzzati_d_res_low_obs 50.00 _refine_analyze.Luzzati_coordinate_error_free 0.53 _refine_analyze.Luzzati_sigma_a_free 0.38 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1686 _refine_hist.pdbx_number_atoms_nucleic_acid 1436 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 32 _refine_hist.number_atoms_total 3154 _refine_hist.d_res_high 3.02 _refine_hist.d_res_low 28.33 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.1 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.33 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 2.64 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 4.21 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 3.13 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 4.33 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 3.02 _refine_ls_shell.d_res_low 3.19 _refine_ls_shell.number_reflns_R_work 1007 _refine_ls_shell.R_factor_R_work 0.351 _refine_ls_shell.percent_reflns_obs 62.8 _refine_ls_shell.R_factor_R_free 0.395 _refine_ls_shell.R_factor_R_free_error 0.045 _refine_ls_shell.percent_reflns_R_free 7.0 _refine_ls_shell.number_reflns_R_free 76 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param ? 'X-RAY DIFFRACTION' 3 water_rep.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 2NP2 _struct.title 'Hbb-DNA complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2NP2 _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' _struct_keywords.text 'protein-dna complex, dna-binding protein, dna-bending protein, DNABII family, HU/IHF family, DNA BINDING PROTEIN-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS C 11 ? ASN C 25 ? LYS A 11 ASN A 25 1 ? 15 HELX_P HELX_P2 2 GLU C 30 ? SER C 51 ? GLU A 30 SER A 51 1 ? 22 HELX_P HELX_P3 3 GLY C 96 ? GLY C 105 ? GLY A 96 GLY A 105 1 ? 10 HELX_P HELX_P4 4 LYS D 11 ? ASN D 25 ? LYS B 11 ASN B 25 1 ? 15 HELX_P HELX_P5 5 GLU D 30 ? SER D 51 ? GLU B 30 SER B 51 1 ? 22 HELX_P HELX_P6 6 GLY D 96 ? GLY D 105 ? GLY B 96 GLY B 105 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 35 N3 ? ? C DG 203 D DC 237 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 35 O2 ? ? C DG 203 D DC 237 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 35 N4 ? ? C DG 203 D DC 237 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 34 N1 ? ? C DT 204 D DA 236 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DA 34 N6 ? ? C DT 204 D DA 236 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 33 N3 ? ? C DA 205 D DT 235 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 33 O4 ? ? C DA 205 D DT 235 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 32 N1 ? ? C DT 206 D DA 234 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 32 N6 ? ? C DT 206 D DA 234 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 31 N1 ? ? C DT 207 D DA 233 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 31 N6 ? ? C DT 207 D DA 233 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 30 N1 ? ? C DT 208 D DA 232 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 30 N6 ? ? C DT 208 D DA 232 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 29 N3 ? ? C DA 209 D DT 231 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 29 O4 ? ? C DA 209 D DT 231 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 28 N3 ? ? C DA 210 D DT 230 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 28 O4 ? ? C DA 210 D DT 230 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 27 N1 ? ? C DT 211 D DA 229 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 27 N6 ? ? C DT 211 D DA 229 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 26 N3 ? ? C DA 212 D DT 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 26 O4 ? ? C DA 212 D DT 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 25 N1 ? ? C DC 213 D DG 227 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 25 O6 ? ? C DC 213 D DG 227 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 25 N2 ? ? C DC 213 D DG 227 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 24 N1 ? ? C DT 214 D DA 226 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 24 N6 ? ? C DT 214 D DA 226 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DA 13 N1 ? ? ? 1_555 B DT 23 N3 ? ? C DA 215 D DT 225 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DA 13 N6 ? ? ? 1_555 B DT 23 O4 ? ? C DA 215 D DT 225 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DT 14 N3 ? ? ? 1_555 B DA 22 N1 ? ? C DT 216 D DA 224 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 14 O4 ? ? ? 1_555 B DA 22 N6 ? ? C DT 216 D DA 224 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DA 15 N1 ? ? ? 1_555 B DT 21 N3 ? ? C DA 217 D DT 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DA 15 N6 ? ? ? 1_555 B DT 21 O4 ? ? C DA 217 D DT 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DT 16 N3 ? ? ? 1_555 B DA 20 N1 ? ? C DT 218 D DA 222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DT 16 O4 ? ? ? 1_555 B DA 20 N6 ? ? C DT 218 D DA 222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DG 17 N1 ? ? ? 1_555 B DC 19 N3 ? ? C DG 219 D DC 221 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DG 17 N2 ? ? ? 1_555 B DC 19 O2 ? ? C DG 219 D DC 221 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DG 17 O6 ? ? ? 1_555 B DC 19 N4 ? ? C DG 219 D DC 221 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 19 N3 ? ? ? 1_555 B DG 17 N1 ? ? C DC 221 D DG 219 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DC 19 N4 ? ? ? 1_555 B DG 17 O6 ? ? C DC 221 D DG 219 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DC 19 O2 ? ? ? 1_555 B DG 17 N2 ? ? C DC 221 D DG 219 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DA 20 N1 ? ? ? 1_555 B DT 16 N3 ? ? C DA 222 D DT 218 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DA 20 N6 ? ? ? 1_555 B DT 16 O4 ? ? C DA 222 D DT 218 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DT 21 N3 ? ? ? 1_555 B DA 15 N1 ? ? C DT 223 D DA 217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DT 21 O4 ? ? ? 1_555 B DA 15 N6 ? ? C DT 223 D DA 217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DA 22 N1 ? ? ? 1_555 B DT 14 N3 ? ? C DA 224 D DT 216 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DA 22 N6 ? ? ? 1_555 B DT 14 O4 ? ? C DA 224 D DT 216 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DT 23 N3 ? ? ? 1_555 B DA 13 N1 ? ? C DT 225 D DA 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A DT 23 O4 ? ? ? 1_555 B DA 13 N6 ? ? C DT 225 D DA 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A DA 24 N1 ? ? ? 1_555 B DT 12 N3 ? ? C DA 226 D DT 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A DA 24 N6 ? ? ? 1_555 B DT 12 O4 ? ? C DA 226 D DT 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A DG 25 N1 ? ? ? 1_555 B DC 11 N3 ? ? C DG 227 D DC 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A DG 25 N2 ? ? ? 1_555 B DC 11 O2 ? ? C DG 227 D DC 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A DG 25 O6 ? ? ? 1_555 B DC 11 N4 ? ? C DG 227 D DC 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A DT 26 N3 ? ? ? 1_555 B DA 10 N1 ? ? C DT 228 D DA 212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A DT 26 O4 ? ? ? 1_555 B DA 10 N6 ? ? C DT 228 D DA 212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A DA 27 N1 ? ? ? 1_555 B DT 9 N3 ? ? C DA 229 D DT 211 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A DA 27 N6 ? ? ? 1_555 B DT 9 O4 ? ? C DA 229 D DT 211 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A DT 28 N3 ? ? ? 1_555 B DA 8 N1 ? ? C DT 230 D DA 210 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A DT 28 O4 ? ? ? 1_555 B DA 8 N6 ? ? C DT 230 D DA 210 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A DT 29 N3 ? ? ? 1_555 B DA 7 N1 ? ? C DT 231 D DA 209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A DT 29 O4 ? ? ? 1_555 B DA 7 N6 ? ? C DT 231 D DA 209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A DA 30 N1 ? ? ? 1_555 B DT 6 N3 ? ? C DA 232 D DT 208 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A DA 30 N6 ? ? ? 1_555 B DT 6 O4 ? ? C DA 232 D DT 208 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A DA 31 N1 ? ? ? 1_555 B DT 5 N3 ? ? C DA 233 D DT 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A DA 31 N6 ? ? ? 1_555 B DT 5 O4 ? ? C DA 233 D DT 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A DA 32 N1 ? ? ? 1_555 B DT 4 N3 ? ? C DA 234 D DT 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A DA 32 N6 ? ? ? 1_555 B DT 4 O4 ? ? C DA 234 D DT 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A DT 33 N3 ? ? ? 1_555 B DA 3 N1 ? ? C DT 235 D DA 205 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A DT 33 O4 ? ? ? 1_555 B DA 3 N6 ? ? C DT 235 D DA 205 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A DA 34 N1 ? ? ? 1_555 B DT 2 N3 ? ? C DA 236 D DT 204 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A DA 34 N6 ? ? ? 1_555 B DT 2 O4 ? ? C DA 236 D DT 204 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A DC 35 N3 ? ? ? 1_555 B DG 1 N1 ? ? C DC 237 D DG 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A DC 35 N4 ? ? ? 1_555 B DG 1 O6 ? ? C DC 237 D DG 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A DC 35 O2 ? ? ? 1_555 B DG 1 N2 ? ? C DC 237 D DG 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS C 8 ? THR C 10 ? LYS A 8 THR A 10 A 2 VAL D 54 ? PHE D 57 ? VAL B 54 PHE B 57 A 3 GLY D 61 ? ARG D 68 ? GLY B 61 ARG B 68 A 4 HIS D 88 ? PRO D 95 ? HIS B 88 PRO B 95 B 1 HIS C 88 ? PRO C 95 ? HIS A 88 PRO A 95 B 2 GLY C 61 ? ARG C 68 ? GLY A 61 ARG A 68 B 3 VAL C 54 ? PHE C 57 ? VAL A 54 PHE A 57 B 4 LYS D 8 ? THR D 10 ? LYS B 8 THR B 10 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL C 9 ? N VAL A 9 O VAL D 54 ? O VAL B 54 A 2 3 N ILE D 55 ? N ILE B 55 O PHE D 63 ? O PHE B 63 A 3 4 N THR D 62 ? N THR B 62 O ARG D 94 ? O ARG B 94 B 1 2 O ARG C 94 ? O ARG A 94 N THR C 62 ? N THR A 62 B 2 3 O PHE C 63 ? O PHE A 63 N ILE C 55 ? N ILE A 55 B 3 4 N VAL C 54 ? N VAL A 54 O VAL D 9 ? O VAL B 9 # _database_PDB_matrix.entry_id 2NP2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 2NP2 _atom_sites.fract_transf_matrix[1][1] 0.016872 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011322 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010355 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 203 203 DG G C . n A 1 2 DT 2 204 204 DT T C . n A 1 3 DA 3 205 205 DA A C . n A 1 4 DT 4 206 206 DT T C . n A 1 5 DT 5 207 207 DT T C . n A 1 6 DT 6 208 208 DT T C . n A 1 7 DA 7 209 209 DA A C . n A 1 8 DA 8 210 210 DA A C . n A 1 9 DT 9 211 211 DT T C . n A 1 10 DA 10 212 212 DA A C . n A 1 11 DC 11 213 213 DC C C . n A 1 12 DT 12 214 214 DT T C . n A 1 13 DA 13 215 215 DA A C . n A 1 14 DT 14 216 216 DT T C . n A 1 15 DA 15 217 217 DA A C . n A 1 16 DT 16 218 218 DT T C . n A 1 17 DG 17 219 219 DG G C . n A 1 18 DT 18 220 220 DT T C . n A 1 19 DC 19 221 221 DC C C . n A 1 20 DA 20 222 222 DA A C . n A 1 21 DT 21 223 223 DT T C . n A 1 22 DA 22 224 224 DA A C . n A 1 23 DT 23 225 225 DT T C . n A 1 24 DA 24 226 226 DA A C . n A 1 25 DG 25 227 227 DG G C . n A 1 26 DT 26 228 228 DT T C . n A 1 27 DA 27 229 229 DA A C . n A 1 28 DT 28 230 230 DT T C . n A 1 29 DT 29 231 231 DT T C . n A 1 30 DA 30 232 232 DA A C . n A 1 31 DA 31 233 233 DA A C . n A 1 32 DA 32 234 234 DA A C . n A 1 33 DT 33 235 235 DT T C . n A 1 34 DA 34 236 236 DA A C . n A 1 35 DC 35 237 237 DC C C . n A 1 36 DT 36 238 238 DT T C . n B 1 1 DG 1 203 203 DG G D . n B 1 2 DT 2 204 204 DT T D . n B 1 3 DA 3 205 205 DA A D . n B 1 4 DT 4 206 206 DT T D . n B 1 5 DT 5 207 207 DT T D . n B 1 6 DT 6 208 208 DT T D . n B 1 7 DA 7 209 209 DA A D . n B 1 8 DA 8 210 210 DA A D . n B 1 9 DT 9 211 211 DT T D . n B 1 10 DA 10 212 212 DA A D . n B 1 11 DC 11 213 213 DC C D . n B 1 12 DT 12 214 214 DT T D . n B 1 13 DA 13 215 215 DA A D . n B 1 14 DT 14 216 216 DT T D . n B 1 15 DA 15 217 217 DA A D . n B 1 16 DT 16 218 218 DT T D . n B 1 17 DG 17 219 219 DG G D . n B 1 18 DT 18 220 220 DT T D . n B 1 19 DC 19 221 221 DC C D . n B 1 20 DA 20 222 222 DA A D . n B 1 21 DT 21 223 223 DT T D . n B 1 22 DA 22 224 224 DA A D . n B 1 23 DT 23 225 225 DT T D . n B 1 24 DA 24 226 226 DA A D . n B 1 25 DG 25 227 227 DG G D . n B 1 26 DT 26 228 228 DT T D . n B 1 27 DA 27 229 229 DA A D . n B 1 28 DT 28 230 230 DT T D . n B 1 29 DT 29 231 231 DT T D . n B 1 30 DA 30 232 232 DA A D . n B 1 31 DA 31 233 233 DA A D . n B 1 32 DA 32 234 234 DA A D . n B 1 33 DT 33 235 235 DT T D . n B 1 34 DA 34 236 236 DA A D . n B 1 35 DC 35 237 237 DC C D . n B 1 36 DT 36 238 238 DT T D . n C 2 1 MET 1 1 ? ? ? A . n C 2 2 SER 2 2 ? ? ? A . n C 2 3 PHE 3 3 ? ? ? A . n C 2 4 SER 4 4 ? ? ? A . n C 2 5 ARG 5 5 ? ? ? A . n C 2 6 ARG 6 6 6 ARG ARG A . n C 2 7 PRO 7 7 7 PRO PRO A . n C 2 8 LYS 8 8 8 LYS LYS A . n C 2 9 VAL 9 9 9 VAL VAL A . n C 2 10 THR 10 10 10 THR THR A . n C 2 11 LYS 11 11 11 LYS LYS A . n C 2 12 SER 12 12 12 SER SER A . n C 2 13 ASP 13 13 13 ASP ASP A . n C 2 14 ILE 14 14 14 ILE ILE A . n C 2 15 VAL 15 15 15 VAL VAL A . n C 2 16 ASP 16 16 16 ASP ASP A . n C 2 17 GLN 17 17 17 GLN GLN A . n C 2 18 ILE 18 18 18 ILE ILE A . n C 2 19 ALA 19 19 19 ALA ALA A . n C 2 20 LEU 20 20 20 LEU LEU A . n C 2 21 ASN 21 21 21 ASN ASN A . n C 2 22 ILE 22 22 22 ILE ILE A . n C 2 23 LYS 23 23 23 LYS LYS A . n C 2 24 ASN 24 24 24 ASN ASN A . n C 2 25 ASN 25 25 25 ASN ASN A . n C 2 26 ASN 26 26 26 ASN ASN A . n C 2 27 LEU 27 27 27 LEU LEU A . n C 2 28 LYS 28 28 28 LYS LYS A . n C 2 29 LEU 29 29 29 LEU LEU A . n C 2 30 GLU 30 30 30 GLU GLU A . n C 2 31 LYS 31 31 31 LYS LYS A . n C 2 32 LYS 32 32 32 LYS LYS A . n C 2 33 TYR 33 33 33 TYR TYR A . n C 2 34 ILE 34 34 34 ILE ILE A . n C 2 35 ARG 35 35 35 ARG ARG A . n C 2 36 LEU 36 36 36 LEU LEU A . n C 2 37 VAL 37 37 37 VAL VAL A . n C 2 38 ILE 38 38 38 ILE ILE A . n C 2 39 ASP 39 39 39 ASP ASP A . n C 2 40 ALA 40 40 40 ALA ALA A . n C 2 41 PHE 41 41 41 PHE PHE A . n C 2 42 PHE 42 42 42 PHE PHE A . n C 2 43 GLU 43 43 43 GLU GLU A . n C 2 44 GLU 44 44 44 GLU GLU A . n C 2 45 LEU 45 45 45 LEU LEU A . n C 2 46 LYS 46 46 46 LYS LYS A . n C 2 47 SER 47 47 47 SER SER A . n C 2 48 ASN 48 48 48 ASN ASN A . n C 2 49 LEU 49 49 49 LEU LEU A . n C 2 50 CYS 50 50 50 CYS CYS A . n C 2 51 SER 51 51 51 SER SER A . n C 2 52 ASN 52 52 52 ASN ASN A . n C 2 53 ASN 53 53 53 ASN ASN A . n C 2 54 VAL 54 54 54 VAL VAL A . n C 2 55 ILE 55 55 55 ILE ILE A . n C 2 56 GLU 56 56 56 GLU GLU A . n C 2 57 PHE 57 57 57 PHE PHE A . n C 2 58 ARG 58 58 58 ARG ARG A . n C 2 59 SER 59 59 59 SER SER A . n C 2 60 PHE 60 60 60 PHE PHE A . n C 2 61 GLY 61 61 61 GLY GLY A . n C 2 62 THR 62 62 62 THR THR A . n C 2 63 PHE 63 63 63 PHE PHE A . n C 2 64 GLU 64 64 64 GLU GLU A . n C 2 65 VAL 65 65 65 VAL VAL A . n C 2 66 ARG 66 66 66 ARG ARG A . n C 2 67 LYS 67 67 67 LYS LYS A . n C 2 68 ARG 68 68 68 ARG ARG A . n C 2 69 LYS 69 69 69 LYS LYS A . n C 2 70 GLY 70 70 70 GLY GLY A . n C 2 71 ARG 71 71 71 ARG ARG A . n C 2 72 LEU 72 72 72 LEU LEU A . n C 2 73 ASN 73 73 73 ASN ASN A . n C 2 74 ALA 74 74 74 ALA ALA A . n C 2 75 ARG 75 75 75 ARG ARG A . n C 2 76 ASN 76 76 76 ASN ASN A . n C 2 77 PRO 77 77 77 PRO PRO A . n C 2 78 GLN 78 78 78 GLN GLN A . n C 2 79 THR 79 79 79 THR THR A . n C 2 80 GLY 80 80 80 GLY GLY A . n C 2 81 GLU 81 81 81 GLU GLU A . n C 2 82 TYR 82 82 82 TYR TYR A . n C 2 83 VAL 83 83 83 VAL VAL A . n C 2 84 LYS 84 84 84 LYS LYS A . n C 2 85 VAL 85 85 85 VAL VAL A . n C 2 86 LEU 86 86 86 LEU LEU A . n C 2 87 ASP 87 87 87 ASP ASP A . n C 2 88 HIS 88 88 88 HIS HIS A . n C 2 89 HIS 89 89 89 HIS HIS A . n C 2 90 VAL 90 90 90 VAL VAL A . n C 2 91 ALA 91 91 91 ALA ALA A . n C 2 92 TYR 92 92 92 TYR TYR A . n C 2 93 PHE 93 93 93 PHE PHE A . n C 2 94 ARG 94 94 94 ARG ARG A . n C 2 95 PRO 95 95 95 PRO PRO A . n C 2 96 GLY 96 96 96 GLY GLY A . n C 2 97 LYS 97 97 97 LYS LYS A . n C 2 98 ASP 98 98 98 ASP ASP A . n C 2 99 LEU 99 99 99 LEU LEU A . n C 2 100 LYS 100 100 100 LYS LYS A . n C 2 101 GLU 101 101 101 GLU GLU A . n C 2 102 ARG 102 102 102 ARG ARG A . n C 2 103 VAL 103 103 103 VAL VAL A . n C 2 104 TRP 104 104 104 TRP TRP A . n C 2 105 GLY 105 105 105 GLY GLY A . n C 2 106 ILE 106 106 106 ILE ILE A . n C 2 107 LYS 107 107 107 LYS LYS A . n C 2 108 GLY 108 108 ? ? ? A . n D 2 1 MET 1 1 ? ? ? B . n D 2 2 SER 2 2 ? ? ? B . n D 2 3 PHE 3 3 ? ? ? B . n D 2 4 SER 4 4 ? ? ? B . n D 2 5 ARG 5 5 ? ? ? B . n D 2 6 ARG 6 6 6 ARG ARG B . n D 2 7 PRO 7 7 7 PRO PRO B . n D 2 8 LYS 8 8 8 LYS LYS B . n D 2 9 VAL 9 9 9 VAL VAL B . n D 2 10 THR 10 10 10 THR THR B . n D 2 11 LYS 11 11 11 LYS LYS B . n D 2 12 SER 12 12 12 SER SER B . n D 2 13 ASP 13 13 13 ASP ASP B . n D 2 14 ILE 14 14 14 ILE ILE B . n D 2 15 VAL 15 15 15 VAL VAL B . n D 2 16 ASP 16 16 16 ASP ASP B . n D 2 17 GLN 17 17 17 GLN GLN B . n D 2 18 ILE 18 18 18 ILE ILE B . n D 2 19 ALA 19 19 19 ALA ALA B . n D 2 20 LEU 20 20 20 LEU LEU B . n D 2 21 ASN 21 21 21 ASN ASN B . n D 2 22 ILE 22 22 22 ILE ILE B . n D 2 23 LYS 23 23 23 LYS LYS B . n D 2 24 ASN 24 24 24 ASN ASN B . n D 2 25 ASN 25 25 25 ASN ASN B . n D 2 26 ASN 26 26 26 ASN ASN B . n D 2 27 LEU 27 27 27 LEU LEU B . n D 2 28 LYS 28 28 28 LYS LYS B . n D 2 29 LEU 29 29 29 LEU LEU B . n D 2 30 GLU 30 30 30 GLU GLU B . n D 2 31 LYS 31 31 31 LYS LYS B . n D 2 32 LYS 32 32 32 LYS LYS B . n D 2 33 TYR 33 33 33 TYR TYR B . n D 2 34 ILE 34 34 34 ILE ILE B . n D 2 35 ARG 35 35 35 ARG ARG B . n D 2 36 LEU 36 36 36 LEU LEU B . n D 2 37 VAL 37 37 37 VAL VAL B . n D 2 38 ILE 38 38 38 ILE ILE B . n D 2 39 ASP 39 39 39 ASP ASP B . n D 2 40 ALA 40 40 40 ALA ALA B . n D 2 41 PHE 41 41 41 PHE PHE B . n D 2 42 PHE 42 42 42 PHE PHE B . n D 2 43 GLU 43 43 43 GLU GLU B . n D 2 44 GLU 44 44 44 GLU GLU B . n D 2 45 LEU 45 45 45 LEU LEU B . n D 2 46 LYS 46 46 46 LYS LYS B . n D 2 47 SER 47 47 47 SER SER B . n D 2 48 ASN 48 48 48 ASN ASN B . n D 2 49 LEU 49 49 49 LEU LEU B . n D 2 50 CYS 50 50 50 CYS CYS B . n D 2 51 SER 51 51 51 SER SER B . n D 2 52 ASN 52 52 52 ASN ASN B . n D 2 53 ASN 53 53 53 ASN ASN B . n D 2 54 VAL 54 54 54 VAL VAL B . n D 2 55 ILE 55 55 55 ILE ILE B . n D 2 56 GLU 56 56 56 GLU GLU B . n D 2 57 PHE 57 57 57 PHE PHE B . n D 2 58 ARG 58 58 58 ARG ARG B . n D 2 59 SER 59 59 59 SER SER B . n D 2 60 PHE 60 60 60 PHE PHE B . n D 2 61 GLY 61 61 61 GLY GLY B . n D 2 62 THR 62 62 62 THR THR B . n D 2 63 PHE 63 63 63 PHE PHE B . n D 2 64 GLU 64 64 64 GLU GLU B . n D 2 65 VAL 65 65 65 VAL VAL B . n D 2 66 ARG 66 66 66 ARG ARG B . n D 2 67 LYS 67 67 67 LYS LYS B . n D 2 68 ARG 68 68 68 ARG ARG B . n D 2 69 LYS 69 69 69 LYS LYS B . n D 2 70 GLY 70 70 70 GLY GLY B . n D 2 71 ARG 71 71 71 ARG ARG B . n D 2 72 LEU 72 72 72 LEU LEU B . n D 2 73 ASN 73 73 73 ASN ASN B . n D 2 74 ALA 74 74 74 ALA ALA B . n D 2 75 ARG 75 75 75 ARG ARG B . n D 2 76 ASN 76 76 76 ASN ASN B . n D 2 77 PRO 77 77 77 PRO PRO B . n D 2 78 GLN 78 78 78 GLN GLN B . n D 2 79 THR 79 79 79 THR THR B . n D 2 80 GLY 80 80 80 GLY GLY B . n D 2 81 GLU 81 81 81 GLU GLU B . n D 2 82 TYR 82 82 82 TYR TYR B . n D 2 83 VAL 83 83 83 VAL VAL B . n D 2 84 LYS 84 84 84 LYS LYS B . n D 2 85 VAL 85 85 85 VAL VAL B . n D 2 86 LEU 86 86 86 LEU LEU B . n D 2 87 ASP 87 87 87 ASP ASP B . n D 2 88 HIS 88 88 88 HIS HIS B . n D 2 89 HIS 89 89 89 HIS HIS B . n D 2 90 VAL 90 90 90 VAL VAL B . n D 2 91 ALA 91 91 91 ALA ALA B . n D 2 92 TYR 92 92 92 TYR TYR B . n D 2 93 PHE 93 93 93 PHE PHE B . n D 2 94 ARG 94 94 94 ARG ARG B . n D 2 95 PRO 95 95 95 PRO PRO B . n D 2 96 GLY 96 96 96 GLY GLY B . n D 2 97 LYS 97 97 97 LYS LYS B . n D 2 98 ASP 98 98 98 ASP ASP B . n D 2 99 LEU 99 99 99 LEU LEU B . n D 2 100 LYS 100 100 100 LYS LYS B . n D 2 101 GLU 101 101 101 GLU GLU B . n D 2 102 ARG 102 102 102 ARG ARG B . n D 2 103 VAL 103 103 103 VAL VAL B . n D 2 104 TRP 104 104 104 TRP TRP B . n D 2 105 GLY 105 105 105 GLY GLY B . n D 2 106 ILE 106 106 106 ILE ILE B . n D 2 107 LYS 107 107 107 LYS LYS B . n D 2 108 GLY 108 108 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 2 2 HOH TIP C . E 3 HOH 2 3 3 HOH TIP C . E 3 HOH 3 7 7 HOH TIP C . E 3 HOH 4 8 8 HOH TIP C . E 3 HOH 5 14 14 HOH TIP C . E 3 HOH 6 18 18 HOH TIP C . E 3 HOH 7 21 21 HOH TIP C . E 3 HOH 8 22 22 HOH TIP C . E 3 HOH 9 24 24 HOH TIP C . E 3 HOH 10 25 25 HOH TIP C . E 3 HOH 11 28 28 HOH TIP C . F 3 HOH 1 6 6 HOH TIP D . F 3 HOH 2 11 11 HOH TIP D . F 3 HOH 3 13 13 HOH TIP D . F 3 HOH 4 17 17 HOH TIP D . F 3 HOH 5 26 26 HOH TIP D . F 3 HOH 6 30 30 HOH TIP D . G 3 HOH 1 109 1 HOH TIP A . G 3 HOH 2 110 10 HOH TIP A . G 3 HOH 3 111 15 HOH TIP A . G 3 HOH 4 112 16 HOH TIP A . G 3 HOH 5 113 20 HOH TIP A . G 3 HOH 6 114 23 HOH TIP A . G 3 HOH 7 115 29 HOH TIP A . H 3 HOH 1 109 4 HOH TIP B . H 3 HOH 2 110 5 HOH TIP B . H 3 HOH 3 111 9 HOH TIP B . H 3 HOH 4 112 12 HOH TIP B . H 3 HOH 5 113 19 HOH TIP B . H 3 HOH 6 114 27 HOH TIP B . H 3 HOH 7 115 31 HOH TIP B . H 3 HOH 8 116 32 HOH TIP B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-02-27 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal CNS 1.1 ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 1 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 2 ADSC QUANTUM ? ? ? ? 'data collection' ? ? ? 3 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 4 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" D DA 209 ? ? "C1'" D DA 209 ? ? N9 D DA 209 ? ? 110.22 108.30 1.92 0.30 N 2 1 C A ARG 94 ? ? N A PRO 95 ? ? CA A PRO 95 ? ? 129.34 119.30 10.04 1.50 Y 3 1 C B ARG 94 ? ? N B PRO 95 ? ? CA B PRO 95 ? ? 129.41 119.30 10.11 1.50 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 25 ? ? -109.40 46.06 2 1 ASN A 26 ? ? 37.26 54.71 3 1 PHE A 60 ? ? -141.17 -55.80 4 1 PRO A 77 ? ? -36.44 -39.38 5 1 PRO A 95 ? ? -39.15 136.12 6 1 ASN B 25 ? ? -108.94 46.62 7 1 ASN B 26 ? ? 36.82 55.03 8 1 ARG B 58 ? ? -26.41 124.16 9 1 SER B 59 ? ? 49.39 72.91 10 1 PHE B 60 ? ? -175.87 -56.57 11 1 PRO B 77 ? ? -36.75 -39.08 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C DT 238 ? "C5'" ? A DT 36 "C5'" 2 1 Y 1 C DT 238 ? "C4'" ? A DT 36 "C4'" 3 1 Y 1 C DT 238 ? "O4'" ? A DT 36 "O4'" 4 1 Y 1 C DT 238 ? "C3'" ? A DT 36 "C3'" 5 1 Y 1 C DT 238 ? "O3'" ? A DT 36 "O3'" 6 1 Y 1 C DT 238 ? "C2'" ? A DT 36 "C2'" 7 1 Y 1 C DT 238 ? "C1'" ? A DT 36 "C1'" 8 1 Y 1 C DT 238 ? N1 ? A DT 36 N1 9 1 Y 1 C DT 238 ? C2 ? A DT 36 C2 10 1 Y 1 C DT 238 ? O2 ? A DT 36 O2 11 1 Y 1 C DT 238 ? N3 ? A DT 36 N3 12 1 Y 1 C DT 238 ? C4 ? A DT 36 C4 13 1 Y 1 C DT 238 ? O4 ? A DT 36 O4 14 1 Y 1 C DT 238 ? C5 ? A DT 36 C5 15 1 Y 1 C DT 238 ? C7 ? A DT 36 C7 16 1 Y 1 C DT 238 ? C6 ? A DT 36 C6 17 1 Y 1 D DT 238 ? "C5'" ? B DT 36 "C5'" 18 1 Y 1 D DT 238 ? "C4'" ? B DT 36 "C4'" 19 1 Y 1 D DT 238 ? "O4'" ? B DT 36 "O4'" 20 1 Y 1 D DT 238 ? "C3'" ? B DT 36 "C3'" 21 1 Y 1 D DT 238 ? "O3'" ? B DT 36 "O3'" 22 1 Y 1 D DT 238 ? "C2'" ? B DT 36 "C2'" 23 1 Y 1 D DT 238 ? "C1'" ? B DT 36 "C1'" 24 1 Y 1 D DT 238 ? N1 ? B DT 36 N1 25 1 Y 1 D DT 238 ? C2 ? B DT 36 C2 26 1 Y 1 D DT 238 ? O2 ? B DT 36 O2 27 1 Y 1 D DT 238 ? N3 ? B DT 36 N3 28 1 Y 1 D DT 238 ? C4 ? B DT 36 C4 29 1 Y 1 D DT 238 ? O4 ? B DT 36 O4 30 1 Y 1 D DT 238 ? C5 ? B DT 36 C5 31 1 Y 1 D DT 238 ? C7 ? B DT 36 C7 32 1 Y 1 D DT 238 ? C6 ? B DT 36 C6 33 1 Y 1 A LYS 107 ? CB ? C LYS 107 CB 34 1 Y 1 A LYS 107 ? CG ? C LYS 107 CG 35 1 Y 1 A LYS 107 ? CD ? C LYS 107 CD 36 1 Y 1 A LYS 107 ? CE ? C LYS 107 CE 37 1 Y 1 A LYS 107 ? NZ ? C LYS 107 NZ 38 1 Y 1 B LYS 107 ? CB ? D LYS 107 CB 39 1 Y 1 B LYS 107 ? CG ? D LYS 107 CG 40 1 Y 1 B LYS 107 ? CD ? D LYS 107 CD 41 1 Y 1 B LYS 107 ? CE ? D LYS 107 CE 42 1 Y 1 B LYS 107 ? NZ ? D LYS 107 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? C MET 1 2 1 Y 1 A SER 2 ? C SER 2 3 1 Y 1 A PHE 3 ? C PHE 3 4 1 Y 1 A SER 4 ? C SER 4 5 1 Y 1 A ARG 5 ? C ARG 5 6 1 Y 1 A GLY 108 ? C GLY 108 7 1 Y 1 B MET 1 ? D MET 1 8 1 Y 1 B SER 2 ? D SER 2 9 1 Y 1 B PHE 3 ? D PHE 3 10 1 Y 1 B SER 4 ? D SER 4 11 1 Y 1 B ARG 5 ? D ARG 5 12 1 Y 1 B GLY 108 ? D GLY 108 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 SER N N N N 433 SER CA C N S 434 SER C C N N 435 SER O O N N 436 SER CB C N N 437 SER OG O N N 438 SER OXT O N N 439 SER H H N N 440 SER H2 H N N 441 SER HA H N N 442 SER HB2 H N N 443 SER HB3 H N N 444 SER HG H N N 445 SER HXT H N N 446 THR N N N N 447 THR CA C N S 448 THR C C N N 449 THR O O N N 450 THR CB C N R 451 THR OG1 O N N 452 THR CG2 C N N 453 THR OXT O N N 454 THR H H N N 455 THR H2 H N N 456 THR HA H N N 457 THR HB H N N 458 THR HG1 H N N 459 THR HG21 H N N 460 THR HG22 H N N 461 THR HG23 H N N 462 THR HXT H N N 463 TRP N N N N 464 TRP CA C N S 465 TRP C C N N 466 TRP O O N N 467 TRP CB C N N 468 TRP CG C Y N 469 TRP CD1 C Y N 470 TRP CD2 C Y N 471 TRP NE1 N Y N 472 TRP CE2 C Y N 473 TRP CE3 C Y N 474 TRP CZ2 C Y N 475 TRP CZ3 C Y N 476 TRP CH2 C Y N 477 TRP OXT O N N 478 TRP H H N N 479 TRP H2 H N N 480 TRP HA H N N 481 TRP HB2 H N N 482 TRP HB3 H N N 483 TRP HD1 H N N 484 TRP HE1 H N N 485 TRP HE3 H N N 486 TRP HZ2 H N N 487 TRP HZ3 H N N 488 TRP HH2 H N N 489 TRP HXT H N N 490 TYR N N N N 491 TYR CA C N S 492 TYR C C N N 493 TYR O O N N 494 TYR CB C N N 495 TYR CG C Y N 496 TYR CD1 C Y N 497 TYR CD2 C Y N 498 TYR CE1 C Y N 499 TYR CE2 C Y N 500 TYR CZ C Y N 501 TYR OH O N N 502 TYR OXT O N N 503 TYR H H N N 504 TYR H2 H N N 505 TYR HA H N N 506 TYR HB2 H N N 507 TYR HB3 H N N 508 TYR HD1 H N N 509 TYR HD2 H N N 510 TYR HE1 H N N 511 TYR HE2 H N N 512 TYR HH H N N 513 TYR HXT H N N 514 VAL N N N N 515 VAL CA C N S 516 VAL C C N N 517 VAL O O N N 518 VAL CB C N N 519 VAL CG1 C N N 520 VAL CG2 C N N 521 VAL OXT O N N 522 VAL H H N N 523 VAL H2 H N N 524 VAL HA H N N 525 VAL HB H N N 526 VAL HG11 H N N 527 VAL HG12 H N N 528 VAL HG13 H N N 529 VAL HG21 H N N 530 VAL HG22 H N N 531 VAL HG23 H N N 532 VAL HXT H N N 533 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2NP2 'double helix' 2NP2 'b-form double helix' 2NP2 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 35 1_555 -0.310 -0.045 -0.016 -16.991 -12.749 1.510 1 C_DG203:DC237_D C 203 ? D 237 ? 19 1 1 A DT 2 1_555 B DA 34 1_555 -0.190 -0.278 -0.391 -9.250 -4.783 -5.187 2 C_DT204:DA236_D C 204 ? D 236 ? 20 1 1 A DA 3 1_555 B DT 33 1_555 -0.703 -0.038 0.082 -3.289 -4.423 4.049 3 C_DA205:DT235_D C 205 ? D 235 ? 20 1 1 A DT 4 1_555 B DA 32 1_555 -0.255 -0.063 0.174 -1.828 -7.137 -5.186 4 C_DT206:DA234_D C 206 ? D 234 ? 20 1 1 A DT 5 1_555 B DA 31 1_555 -0.544 0.107 0.292 -7.579 -0.238 -0.291 5 C_DT207:DA233_D C 207 ? D 233 ? 20 1 1 A DT 6 1_555 B DA 30 1_555 -0.144 0.132 0.254 -0.005 -3.419 2.913 6 C_DT208:DA232_D C 208 ? D 232 ? 20 1 1 A DA 7 1_555 B DT 29 1_555 0.396 -0.344 -0.179 0.670 -0.939 -0.525 7 C_DA209:DT231_D C 209 ? D 231 ? 20 1 1 A DA 8 1_555 B DT 28 1_555 -0.168 -0.484 0.304 -0.458 -7.831 4.756 8 C_DA210:DT230_D C 210 ? D 230 ? 20 1 1 A DT 9 1_555 B DA 27 1_555 0.096 -0.378 0.272 -2.040 -8.203 2.833 9 C_DT211:DA229_D C 211 ? D 229 ? 20 1 1 A DA 10 1_555 B DT 26 1_555 0.091 -0.267 0.220 -4.798 -10.997 4.825 10 C_DA212:DT228_D C 212 ? D 228 ? 20 1 1 A DC 11 1_555 B DG 25 1_555 0.736 -0.045 0.122 1.329 -2.103 8.515 11 C_DC213:DG227_D C 213 ? D 227 ? 19 1 1 A DT 12 1_555 B DA 24 1_555 0.868 -0.222 -0.433 17.870 7.895 4.241 12 C_DT214:DA226_D C 214 ? D 226 ? 20 1 1 A DA 13 1_555 B DT 23 1_555 0.327 -0.052 0.098 48.176 -13.882 9.626 13 C_DA215:DT225_D C 215 ? D 225 ? 20 1 1 A DT 14 1_555 B DA 22 1_555 0.345 -0.067 -0.015 -29.153 -14.552 -0.112 14 C_DT216:DA224_D C 216 ? D 224 ? 20 1 1 A DA 15 1_555 B DT 21 1_555 -0.187 -0.126 0.063 -15.590 -11.250 5.746 15 C_DA217:DT223_D C 217 ? D 223 ? 20 1 1 A DT 16 1_555 B DA 20 1_555 0.515 0.208 0.061 -7.237 -12.580 -3.601 16 C_DT218:DA222_D C 218 ? D 222 ? 20 1 1 A DG 17 1_555 B DC 19 1_555 0.007 -0.212 -0.104 9.080 -6.481 -11.283 17 C_DG219:DC221_D C 219 ? D 221 ? 19 1 1 A DC 19 1_555 B DG 17 1_555 0.131 -0.147 -0.142 -8.060 -7.450 -11.846 18 C_DC221:DG219_D C 221 ? D 219 ? 19 1 1 A DA 20 1_555 B DT 16 1_555 -0.459 0.145 -0.019 8.043 -14.936 -4.023 19 C_DA222:DT218_D C 222 ? D 218 ? 20 1 1 A DT 21 1_555 B DA 15 1_555 0.108 -0.180 -0.004 15.136 -12.983 5.228 20 C_DT223:DA217_D C 223 ? D 217 ? 20 1 1 A DA 22 1_555 B DT 14 1_555 -0.407 -0.399 0.093 26.045 -12.460 -0.401 21 C_DA224:DT216_D C 224 ? D 216 ? 20 1 1 A DT 23 1_555 B DA 13 1_555 0.415 0.042 0.024 -46.754 -14.468 20.289 22 C_DT225:DA215_D C 225 ? D 215 ? 20 1 1 A DA 24 1_555 B DT 12 1_555 -1.066 -0.354 -0.516 -18.080 8.732 1.438 23 C_DA226:DT214_D C 226 ? D 214 ? 20 1 1 A DG 25 1_555 B DC 11 1_555 -0.891 -0.068 0.007 -0.530 -2.018 6.012 24 C_DG227:DC213_D C 227 ? D 213 ? 19 1 1 A DT 26 1_555 B DA 10 1_555 -0.182 -0.200 0.083 6.407 -10.528 2.470 25 C_DT228:DA212_D C 228 ? D 212 ? 20 1 1 A DA 27 1_555 B DT 9 1_555 -0.175 -0.324 0.126 2.698 -8.944 0.763 26 C_DA229:DT211_D C 229 ? D 211 ? 20 1 1 A DT 28 1_555 B DA 8 1_555 0.066 -0.424 0.108 1.208 -8.624 2.763 27 C_DT230:DA210_D C 230 ? D 210 ? 20 1 1 A DT 29 1_555 B DA 7 1_555 -0.110 -0.459 -0.207 0.750 -1.714 -2.939 28 C_DT231:DA209_D C 231 ? D 209 ? 20 1 1 A DA 30 1_555 B DT 6 1_555 0.320 -0.174 0.198 -0.059 -4.899 0.506 29 C_DA232:DT208_D C 232 ? D 208 ? 20 1 1 A DA 31 1_555 B DT 5 1_555 0.470 -0.262 0.370 7.890 -1.018 -2.494 30 C_DA233:DT207_D C 233 ? D 207 ? 20 1 1 A DA 32 1_555 B DT 4 1_555 -0.045 -0.281 0.202 1.409 -8.732 -7.499 31 C_DA234:DT206_D C 234 ? D 206 ? 20 1 1 A DT 33 1_555 B DA 3 1_555 0.214 -0.027 0.063 2.681 -4.418 1.156 32 C_DT235:DA205_D C 235 ? D 205 ? 20 1 1 A DA 34 1_555 B DT 2 1_555 -0.166 0.002 -0.349 7.436 -5.442 -7.737 33 C_DA236:DT204_D C 236 ? D 204 ? 20 1 1 A DC 35 1_555 B DG 1 1_555 0.653 -0.275 -0.077 10.258 -9.797 -2.120 34 C_DC237:DG203_D C 237 ? D 203 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 35 1_555 A DT 2 1_555 B DA 34 1_555 -0.853 -0.819 2.971 4.912 4.137 38.003 -1.692 1.828 2.743 6.297 -7.477 38.522 1 CC_DG203DT204:DA236DC237_DD C 203 ? D 237 ? C 204 ? D 236 ? 1 A DT 2 1_555 B DA 34 1_555 A DA 3 1_555 B DT 33 1_555 -0.113 0.436 3.189 -6.967 4.723 32.648 -0.008 -0.927 3.176 8.233 12.143 33.687 2 CC_DT204DA205:DT235DA236_DD C 204 ? D 236 ? C 205 ? D 235 ? 1 A DA 3 1_555 B DT 33 1_555 A DT 4 1_555 B DA 32 1_555 -0.700 -0.730 3.231 -0.139 -1.300 35.000 -1.020 1.142 3.258 -2.160 0.231 35.023 3 CC_DA205DT206:DA234DT235_DD C 205 ? D 235 ? C 206 ? D 234 ? 1 A DT 4 1_555 B DA 32 1_555 A DT 5 1_555 B DA 31 1_555 0.989 0.173 3.451 2.611 0.920 37.259 0.140 -1.177 3.513 1.438 -4.079 37.358 4 CC_DT206DT207:DA233DA234_DD C 206 ? D 234 ? C 207 ? D 233 ? 1 A DT 5 1_555 B DA 31 1_555 A DT 6 1_555 B DA 30 1_555 -0.495 -0.161 3.157 0.452 3.908 29.177 -1.120 1.068 3.102 7.713 -0.891 29.436 5 CC_DT207DT208:DA232DA233_DD C 207 ? D 233 ? C 208 ? D 232 ? 1 A DT 6 1_555 B DA 30 1_555 A DA 7 1_555 B DT 29 1_555 0.799 0.862 3.330 4.268 -1.528 39.994 1.431 -0.666 3.361 -2.226 -6.216 40.240 6 CC_DT208DA209:DT231DA232_DD C 208 ? D 232 ? C 209 ? D 231 ? 1 A DA 7 1_555 B DT 29 1_555 A DA 8 1_555 B DT 28 1_555 -0.844 0.230 3.336 -7.358 0.022 35.538 0.367 0.277 3.437 0.035 11.897 36.267 7 CC_DA209DA210:DT230DT231_DD C 209 ? D 231 ? C 210 ? D 230 ? 1 A DA 8 1_555 B DT 28 1_555 A DT 9 1_555 B DA 27 1_555 -0.495 -0.784 3.331 -0.859 -1.981 37.237 -0.957 0.658 3.377 -3.099 1.344 37.297 8 CC_DA210DT211:DA229DT230_DD C 210 ? D 230 ? C 211 ? D 229 ? 1 A DT 9 1_555 B DA 27 1_555 A DA 10 1_555 B DT 26 1_555 -0.289 0.461 3.331 -2.318 0.890 39.082 0.578 0.147 3.351 1.329 3.460 39.158 9 CC_DT211DA212:DT228DA229_DD C 211 ? D 229 ? C 212 ? D 228 ? 1 A DA 10 1_555 B DT 26 1_555 A DC 11 1_555 B DG 25 1_555 0.797 -0.143 3.182 -0.940 3.769 35.074 -0.776 -1.450 3.129 6.231 1.554 35.282 10 CC_DA212DC213:DG227DT228_DD C 212 ? D 228 ? C 213 ? D 227 ? 1 A DC 11 1_555 B DG 25 1_555 A DT 12 1_555 B DA 24 1_555 0.795 0.921 2.985 9.113 11.888 28.731 -0.464 0.196 3.211 22.158 -16.985 32.328 11 CC_DC213DT214:DA226DG227_DD C 213 ? D 227 ? C 214 ? D 226 ? 1 A DT 12 1_555 B DA 24 1_555 A DA 13 1_555 B DT 23 1_555 0.209 1.777 2.760 7.282 12.956 17.772 -0.215 2.092 3.179 35.024 -19.687 23.129 12 CC_DT214DA215:DT225DA226_DD C 214 ? D 226 ? C 215 ? D 225 ? 1 A DA 13 1_555 B DT 23 1_555 A DT 14 1_555 B DA 22 1_555 -0.250 1.194 6.301 0.435 64.945 8.667 -5.614 0.276 2.061 83.227 -0.557 65.460 13 CC_DA215DT216:DA224DT225_DD C 215 ? D 225 ? C 216 ? D 224 ? 1 A DT 14 1_555 B DA 22 1_555 A DA 15 1_555 B DT 21 1_555 -0.976 1.776 3.028 -10.540 -3.185 36.965 3.066 0.243 3.027 -4.892 16.188 38.515 14 CC_DT216DA217:DT223DA224_DD C 216 ? D 224 ? C 217 ? D 223 ? 1 A DA 15 1_555 B DT 21 1_555 A DT 16 1_555 B DA 20 1_555 -0.609 -0.342 3.085 1.819 0.708 36.319 -0.640 1.213 3.045 1.134 -2.916 36.370 15 CC_DA217DT218:DA222DT223_DD C 217 ? D 223 ? C 218 ? D 222 ? 1 A DT 16 1_555 B DA 20 1_555 A DG 17 1_555 B DC 19 1_555 0.281 1.072 3.115 2.241 4.985 28.117 1.058 -0.069 3.264 10.140 -4.557 28.633 16 CC_DT218DG219:DC221DA222_DD C 218 ? D 222 ? C 219 ? D 221 ? 1 A DC 19 1_555 B DG 17 1_555 A DA 20 1_555 B DT 16 1_555 -0.278 1.073 3.096 -1.764 4.637 28.044 1.147 0.171 3.239 9.475 3.604 28.471 17 CC_DC221DA222:DT218DG219_DD C 221 ? D 219 ? C 222 ? D 218 ? 1 A DA 20 1_555 B DT 16 1_555 A DT 21 1_555 B DA 15 1_555 0.613 -0.330 3.078 -1.742 0.857 36.593 -0.634 -1.199 3.038 1.363 2.772 36.643 18 CC_DA222DT223:DA217DT218_DD C 222 ? D 218 ? C 223 ? D 217 ? 1 A DT 21 1_555 B DA 15 1_555 A DA 22 1_555 B DT 14 1_555 1.043 1.551 3.134 8.958 -1.494 36.904 2.572 -0.474 3.228 -2.317 -13.894 37.967 19 CC_DT223DA224:DT216DA217_DD C 223 ? D 217 ? C 224 ? D 216 ? 1 A DA 22 1_555 B DT 14 1_555 A DT 23 1_555 B DA 13 1_555 0.653 1.426 6.033 4.533 60.928 13.973 -5.343 -0.129 2.843 78.139 -5.813 62.523 20 CC_DA224DT225:DA215DT216_DD C 224 ? D 216 ? C 225 ? D 215 ? 1 A DT 23 1_555 B DA 13 1_555 A DA 24 1_555 B DT 12 1_555 -0.602 1.710 2.760 -7.724 16.903 11.830 -3.035 -1.856 3.011 52.567 24.021 22.002 21 CC_DT225DA226:DT214DA215_DD C 225 ? D 215 ? C 226 ? D 214 ? 1 A DA 24 1_555 B DT 12 1_555 A DG 25 1_555 B DC 11 1_555 -0.841 0.906 2.984 -9.198 10.974 28.615 -0.354 -0.147 3.223 20.650 17.308 31.931 22 CC_DA226DG227:DC213DT214_DD C 226 ? D 214 ? C 227 ? D 213 ? 1 A DG 25 1_555 B DC 11 1_555 A DT 26 1_555 B DA 10 1_555 -0.804 -0.149 3.160 0.665 3.590 35.249 -0.752 1.415 3.115 5.909 -1.094 35.432 23 CC_DG227DT228:DA212DC213_DD C 227 ? D 213 ? C 228 ? D 212 ? 1 A DT 26 1_555 B DA 10 1_555 A DA 27 1_555 B DT 9 1_555 0.292 0.444 3.355 2.498 0.632 39.024 0.585 -0.128 3.374 0.945 -3.735 39.105 24 CC_DT228DA229:DT211DA212_DD C 228 ? D 212 ? C 229 ? D 211 ? 1 A DA 27 1_555 B DT 9 1_555 A DT 28 1_555 B DA 8 1_555 0.505 -0.772 3.312 1.257 -1.742 37.358 -0.969 -0.619 3.358 -2.716 -1.960 37.417 25 CC_DA229DT230:DA210DT211_DD C 229 ? D 211 ? C 230 ? D 210 ? 1 A DT 28 1_555 B DA 8 1_555 A DT 29 1_555 B DA 7 1_555 0.815 0.451 3.222 5.576 0.647 37.861 0.607 -0.541 3.312 0.991 -8.536 38.260 26 CC_DT230DT231:DA209DA210_DD C 230 ? D 210 ? C 231 ? D 209 ? 1 A DT 29 1_555 B DA 7 1_555 A DA 30 1_555 B DT 6 1_555 -0.809 0.906 3.376 -3.968 -1.564 40.072 1.500 0.708 3.401 -2.275 5.770 40.289 27 CC_DT231DA232:DT208DA209_DD C 231 ? D 209 ? C 232 ? D 208 ? 1 A DA 30 1_555 B DT 6 1_555 A DA 31 1_555 B DT 5 1_555 0.518 -0.168 3.112 -1.621 3.787 29.130 -1.097 -1.348 3.034 7.483 3.203 29.414 28 CC_DA232DA233:DT207DT208_DD C 232 ? D 208 ? C 233 ? D 207 ? 1 A DA 31 1_555 B DT 5 1_555 A DA 32 1_555 B DT 4 1_555 -0.966 0.169 3.483 -2.150 0.276 37.461 0.223 1.200 3.532 0.429 3.344 37.522 29 CC_DA233DA234:DT206DT207_DD C 233 ? D 207 ? C 234 ? D 206 ? 1 A DA 32 1_555 B DT 4 1_555 A DT 33 1_555 B DA 3 1_555 0.696 -0.763 3.217 0.703 -1.238 34.623 -1.093 -1.062 3.254 -2.079 -1.181 34.651 30 CC_DA234DT235:DA205DT206_DD C 234 ? D 206 ? C 235 ? D 205 ? 1 A DT 33 1_555 B DA 3 1_555 A DA 34 1_555 B DT 2 1_555 0.162 0.415 3.197 6.208 4.899 32.897 -0.072 0.717 3.200 8.498 -10.769 33.808 31 CC_DT235DA236:DT204DA205_DD C 235 ? D 205 ? C 236 ? D 204 ? 1 A DA 34 1_555 B DT 2 1_555 A DC 35 1_555 B DG 1 1_555 0.833 -0.929 3.252 -4.996 2.900 42.320 -1.558 -1.631 3.071 3.994 6.881 42.695 32 CC_DA236DC237:DG203DT204_DD C 236 ? D 204 ? C 237 ? D 203 ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1IHF _pdbx_initial_refinement_model.details 'PDB entry: 1IHF' #