HEADER VIRAL PROTEIN/IMMUNE SYSTEM 20-NOV-06 2NY7 TITLE HIV-1 GP120 ENVELOPE GLYCOPROTEIN COMPLEXED WITH THE BROADLY TITLE 2 NEUTRALIZING CD4-BINDING-SITE ANTIBODY B12 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENVELOPE GLYCOPROTEIN GP120; COMPND 3 CHAIN: G; COMPND 4 FRAGMENT: CORE; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ANTIBODY B12, HEAVY CHAIN; COMPND 9 CHAIN: H; COMPND 10 FRAGMENT: ANTIGEN-BINDING FRAGMENT, FAB; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: ANTIBODY B12, LIGHT CHAIN; COMPND 14 CHAIN: L; COMPND 15 FRAGMENT: ANTIGEN-BINDING FRAGMENT, FAB; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 3 ORGANISM_TAXID: 11676; SOURCE 4 STRAIN: HXBC2; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: EMBRYONIC CELL LINE 293; SOURCE 9 EXPRESSION_SYSTEM_ORGAN: KIDNEY; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: CMVR; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 17 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 19 EXPRESSION_SYSTEM_STRAIN: CHO-K1; SOURCE 20 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 21 EXPRESSION_SYSTEM_PLASMID: PDR12; SOURCE 22 MOL_ID: 3; SOURCE 23 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 24 ORGANISM_COMMON: HUMAN; SOURCE 25 ORGANISM_TAXID: 9606; SOURCE 26 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 27 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 29 EXPRESSION_SYSTEM_STRAIN: CHO-K1; SOURCE 30 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 31 EXPRESSION_SYSTEM_PLASMID: PDR12 KEYWDS HIV, GP120, BROADLY NEUTRALIZING ANTIBODY, B12, VIRAL PROTEIN-IMMUNE KEYWDS 2 SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.ZHOU,L.XU,B.DEY,A.J.HESSELL,D.VAN RYK,S.H.XIANG,X.YANG,M.Y.ZHANG, AUTHOR 2 M.B.ZWICK,J.ARTHOS,D.R.BURTON,D.S.DIMITROV,J.SODROSKI,R.WYATT, AUTHOR 3 G.J.NABEL,P.D.KWONG REVDAT 8 20-NOV-24 2NY7 1 REMARK REVDAT 7 30-AUG-23 2NY7 1 HETSYN REVDAT 6 29-JUL-20 2NY7 1 COMPND REMARK HETNAM LINK REVDAT 6 2 1 SITE REVDAT 5 18-OCT-17 2NY7 1 REMARK REVDAT 4 13-JUL-11 2NY7 1 VERSN REVDAT 3 24-FEB-09 2NY7 1 VERSN REVDAT 2 27-FEB-07 2NY7 1 JRNL REVDAT 1 06-FEB-07 2NY7 0 JRNL AUTH T.ZHOU,L.XU,B.DEY,A.J.HESSELL,D.VAN RYK,S.H.XIANG,X.YANG, JRNL AUTH 2 M.Y.ZHANG,M.B.ZWICK,J.ARTHOS,D.R.BURTON,D.S.DIMITROV, JRNL AUTH 3 J.SODROSKI,R.WYATT,G.J.NABEL,P.D.KWONG JRNL TITL STRUCTURAL DEFINITION OF A CONSERVED NEUTRALIZATION EPITOPE JRNL TITL 2 ON HIV-1 GP120. JRNL REF NATURE V. 445 732 2007 JRNL REFN ISSN 0028-0836 JRNL PMID 17301785 JRNL DOI 10.1038/NATURE05580 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 3 NUMBER OF REFLECTIONS : 36114 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1890 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1693 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.31 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE SET COUNT : 93 REMARK 3 BIN FREE R VALUE : 0.3010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5687 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 182 REMARK 3 SOLVENT ATOMS : 308 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.04000 REMARK 3 B22 (A**2) : 0.04000 REMARK 3 B33 (A**2) : -0.06000 REMARK 3 B12 (A**2) : 0.02000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.340 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.252 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.197 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.885 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6031 ; 0.004 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8204 ; 0.852 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 730 ; 5.180 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 252 ;29.691 ;24.087 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 952 ;14.657 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;17.829 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 924 ; 0.056 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4485 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2484 ; 0.216 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4103 ; 0.325 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 538 ; 0.238 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 55 ; 0.220 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.205 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3717 ; 2.174 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5922 ; 3.235 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2595 ; 5.296 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2282 ; 7.281 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 83 G 255 REMARK 3 RESIDUE RANGE : G 734 G 741 REMARK 3 ORIGIN FOR THE GROUP (A): 115.1153 156.7278 271.1539 REMARK 3 T TENSOR REMARK 3 T11: 0.0760 T22: 0.0466 REMARK 3 T33: 0.9616 T12: -0.1584 REMARK 3 T13: -0.2936 T23: 0.0787 REMARK 3 L TENSOR REMARK 3 L11: 7.2095 L22: 16.2817 REMARK 3 L33: 6.2778 L12: -2.8599 REMARK 3 L13: -0.0014 L23: -4.5129 REMARK 3 S TENSOR REMARK 3 S11: 0.5191 S12: -0.0981 S13: 1.4794 REMARK 3 S21: 0.1938 S22: -0.3675 S23: -2.3517 REMARK 3 S31: -0.8546 S32: -0.1864 S33: -0.1516 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 256 G 492 REMARK 3 RESIDUE RANGE : G 762 G 963 REMARK 3 ORIGIN FOR THE GROUP (A): 98.3635 147.7646 278.3407 REMARK 3 T TENSOR REMARK 3 T11: 0.0250 T22: -0.2029 REMARK 3 T33: -0.0611 T12: -0.0594 REMARK 3 T13: -0.2434 T23: -0.0890 REMARK 3 L TENSOR REMARK 3 L11: 5.7271 L22: 5.8699 REMARK 3 L33: 2.8943 L12: -0.7853 REMARK 3 L13: 0.0022 L23: -0.3505 REMARK 3 S TENSOR REMARK 3 S11: -0.0348 S12: -0.5428 S13: 0.7045 REMARK 3 S21: 0.9793 S22: -0.0517 S23: -0.5819 REMARK 3 S31: -0.1437 S32: -0.0437 S33: 0.0865 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1 H 127 REMARK 3 ORIGIN FOR THE GROUP (A): 99.1587 132.6909 252.2531 REMARK 3 T TENSOR REMARK 3 T11: -0.2832 T22: -0.2454 REMARK 3 T33: -0.1600 T12: 0.0194 REMARK 3 T13: 0.0038 T23: 0.0539 REMARK 3 L TENSOR REMARK 3 L11: 0.8407 L22: 2.1225 REMARK 3 L33: 5.8192 L12: 0.1153 REMARK 3 L13: 0.3819 L23: 1.2386 REMARK 3 S TENSOR REMARK 3 S11: 0.0448 S12: 0.1439 S13: 0.0890 REMARK 3 S21: -0.0795 S22: 0.0493 S23: -0.5056 REMARK 3 S31: 0.0222 S32: 0.3291 S33: -0.0941 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 128 H 230 REMARK 3 ORIGIN FOR THE GROUP (A): 79.0099 123.2715 221.9189 REMARK 3 T TENSOR REMARK 3 T11: 0.1069 T22: -0.1150 REMARK 3 T33: -0.2835 T12: -0.0631 REMARK 3 T13: 0.1126 T23: -0.0877 REMARK 3 L TENSOR REMARK 3 L11: 8.2350 L22: 4.3679 REMARK 3 L33: 2.8255 L12: 2.9976 REMARK 3 L13: -1.0235 L23: -1.0552 REMARK 3 S TENSOR REMARK 3 S11: -0.3586 S12: 0.7686 S13: -0.5337 REMARK 3 S21: -1.0501 S22: 0.3672 S23: -0.2004 REMARK 3 S31: 0.3286 S32: -0.3679 S33: -0.0086 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 1 L 110 REMARK 3 ORIGIN FOR THE GROUP (A): 88.1068 114.5802 257.3391 REMARK 3 T TENSOR REMARK 3 T11: -0.0914 T22: -0.3070 REMARK 3 T33: -0.3029 T12: 0.0209 REMARK 3 T13: -0.0197 T23: 0.0506 REMARK 3 L TENSOR REMARK 3 L11: 2.3728 L22: 3.6906 REMARK 3 L33: 4.1653 L12: 1.3766 REMARK 3 L13: 0.7975 L23: 0.9315 REMARK 3 S TENSOR REMARK 3 S11: 0.1170 S12: 0.0680 S13: -0.1716 REMARK 3 S21: 0.1877 S22: -0.0536 S23: -0.0911 REMARK 3 S31: 0.6556 S32: -0.0179 S33: -0.0634 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 111 L 214 REMARK 3 ORIGIN FOR THE GROUP (A): 83.8545 108.3587 222.3273 REMARK 3 T TENSOR REMARK 3 T11: 0.1820 T22: -0.1634 REMARK 3 T33: 0.1359 T12: -0.0487 REMARK 3 T13: 0.2634 T23: -0.2219 REMARK 3 L TENSOR REMARK 3 L11: 4.0510 L22: 5.8889 REMARK 3 L33: 9.5326 L12: 1.8023 REMARK 3 L13: -3.2603 L23: -0.6773 REMARK 3 S TENSOR REMARK 3 S11: -0.3258 S12: 0.4531 S13: -0.7371 REMARK 3 S21: -1.2692 S22: 0.2140 S23: -1.1491 REMARK 3 S31: 0.5814 S32: 0.1663 S33: 0.1118 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: AUTHORS STATE THAT BECAUSE CRYSTALS REMARK 3 WERE SMALL AND SUBJECT TO HIGH RADIATION DOSAGES DURING DATA REMARK 3 COLLECTION, DIFFERENCE FOURIERS COMPARING THE INITIAL AND FINAL REMARK 3 SWATCHES OF DATA WERE INSPECTED TO IDENTIFY RADIATION-INDUCED REMARK 3 DISULFIDE BREAKAGE, AND THE REFINED MODELS WERE ADJUSTED TO REMARK 3 REFLECT THE INITIAL, RADIATION-DAMAGE FREE STRUCTURE. HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 4 REMARK 4 2NY7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1000040449. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40798 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 8.800 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.75500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRIES 1HZH, 1GC1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 198.86267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 99.43133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 149.14700 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 49.71567 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 248.57833 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 198.86267 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 99.43133 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 49.71567 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 149.14700 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 248.57833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 69180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 -101.95500 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 176.59124 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 546.87233 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 71870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 -50.97750 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 88.29562 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 546.87233 REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 3 0.500000 0.866025 0.000000 -101.95500 REMARK 350 BIOMT2 3 -0.866025 0.500000 0.000000 176.59124 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 49.71567 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 50.97750 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 -88.29562 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 497.15667 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 70970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 -50.97750 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 88.29562 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 546.87233 REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 3 0.500000 0.866025 0.000000 -50.97750 REMARK 350 BIOMT2 3 -0.866025 0.500000 0.000000 88.29562 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 49.71567 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 497.15667 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 67300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 -50.97750 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 88.29562 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 546.87233 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS G 121 REMARK 465 LEU G 122 REMARK 465 THR G 123 REMARK 465 PRO G 124 REMARK 465 LEU G 125 REMARK 465 CYS G 126 REMARK 465 VAL G 127 REMARK 465 GLY G 128 REMARK 465 ALA G 129 REMARK 465 GLY G 194 REMARK 465 SER G 195 REMARK 465 CYS G 196 REMARK 465 ASN G 197 REMARK 465 THR G 198 REMARK 465 SER G 199 REMARK 465 VAL G 200 REMARK 465 ILE G 201 REMARK 465 THR G 202 REMARK 465 GLN G 203 REMARK 465 THR G 402 REMARK 465 GLU G 403 REMARK 465 GLY G 404 REMARK 465 SER G 405 REMARK 465 ASN G 406 REMARK 465 ASN G 407 REMARK 465 THR G 408 REMARK 465 GLU G 409 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH H 350 O HOH L 215 1.86 REMARK 500 O HOH L 219 O HOH L 266 2.06 REMARK 500 O HOH H 296 O HOH L 246 2.07 REMARK 500 O HOH L 224 O HOH L 308 2.09 REMARK 500 O HOH L 243 O HOH L 308 2.10 REMARK 500 O HOH G 993 O HOH G 994 2.13 REMARK 500 O HOH H 249 O HOH H 268 2.15 REMARK 500 O HOH H 291 O HOH H 326 2.15 REMARK 500 O HOH H 256 O HOH H 340 2.16 REMARK 500 O HOH H 277 O HOH L 291 2.16 REMARK 500 O HOH H 240 O HOH L 260 2.18 REMARK 500 O HOH H 279 O HOH H 290 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH H 342 O HOH L 303 12566 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL G 87 -152.06 -108.62 REMARK 500 ASN G 94 88.85 -156.80 REMARK 500 ASN G 98 52.05 -106.90 REMARK 500 HIS G 105 53.29 -98.40 REMARK 500 PRO G 118 105.46 -52.46 REMARK 500 SER G 256 107.76 -167.57 REMARK 500 GLN G 258 -65.40 -127.13 REMARK 500 GLU G 268 -31.73 64.46 REMARK 500 ASN G 276 100.39 -162.56 REMARK 500 ALA G 299 -7.20 -59.51 REMARK 500 ASN G 392 53.40 -158.15 REMARK 500 ASN G 397 -63.62 -98.10 REMARK 500 SER G 398 -9.24 -156.87 REMARK 500 SER G 411 -144.11 -123.64 REMARK 500 ASN G 425 -179.11 174.76 REMARK 500 ILE G 439 15.31 -67.32 REMARK 500 SER H 127 -159.26 176.32 REMARK 500 ASP H 146 66.56 66.45 REMARK 500 SER H 229 86.55 -34.43 REMARK 500 VAL L 51 -48.06 69.70 REMARK 500 ALA L 84 -179.26 177.42 REMARK 500 LYS L 188 8.91 -67.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1HZH RELATED DB: PDB REMARK 900 STRUCTURE OF IGG B12 DBREF 2NY7 G 83 492 UNP P04578 ENV_HV1H2 176 492 DBREF 2NY7 H 1 230 PDB 2NY7 2NY7 1 230 DBREF 2NY7 L 1 214 PDB 2NY7 2NY7 1 214 SEQRES 1 G 317 GLU VAL VAL LEU VAL ASN VAL THR GLU ASN PHE ASN TRP SEQRES 2 G 317 CYS LYS ASN ASP MET VAL GLU GLN MET HIS GLU ASP ILE SEQRES 3 G 317 CYS SER LEU TRP ASP GLN SER LEU LYS PRO CYS VAL LYS SEQRES 4 G 317 LEU THR PRO LEU CYS VAL GLY ALA GLY SER CYS ASN THR SEQRES 5 G 317 SER VAL ILE THR GLN ALA CYS PRO LYS VAL SER PHE GLU SEQRES 6 G 317 PRO ILE PRO ILE HIS TYR CYS ALA PRO ALA GLY PHE ALA SEQRES 7 G 317 ILE LEU LYS CYS ASN ASN LYS THR PHE ASN GLY THR GLY SEQRES 8 G 317 PRO CYS THR ASN VAL SER THR VAL GLN CYS THR HIS GLY SEQRES 9 G 317 ILE ARG PRO VAL VAL SER SER GLN LEU LEU LEU ASN GLY SEQRES 10 G 317 SER LEU ALA GLU GLU GLU VAL VAL ILE ARG SER CYS ASN SEQRES 11 G 317 PHE THR ASP ASN ALA LYS THR ILE ILE VAL GLN LEU ASN SEQRES 12 G 317 THR SER VAL GLU ILE ASN CYS THR GLY ALA GLY HIS CYS SEQRES 13 G 317 ASN ILE ALA ARG ALA LYS TRP ASN ASN THR LEU LYS GLN SEQRES 14 G 317 ILE ALA SER LYS LEU ARG GLU GLN PHE GLY ASN ASN LYS SEQRES 15 G 317 THR ILE ILE PHE LYS GLN SER SER GLY GLY ASP PRO GLU SEQRES 16 G 317 ILE VAL THR HIS TRP PHE ASN CYS GLY GLY GLU PHE PHE SEQRES 17 G 317 TYR CYS ASN SER THR GLN LEU PHE ASN SER THR TRP PHE SEQRES 18 G 317 ASN SER THR TRP SER THR GLU GLY SER ASN ASN THR GLU SEQRES 19 G 317 GLY SER ASP THR ILE THR LEU PRO CYS ARG ILE LYS GLN SEQRES 20 G 317 ILE ILE ASN MET TRP CYS LYS VAL GLY LYS MET MET TYR SEQRES 21 G 317 ALA PRO PRO ILE SER GLY GLN ILE ARG CYS SER SER ASN SEQRES 22 G 317 ILE THR GLY LEU LEU LEU THR ARG ASP GLY GLY ASN SER SEQRES 23 G 317 ASN ASN GLU SER GLU ILE PHE ARG PRO GLY GLY GLY ASP SEQRES 24 G 317 MET ARG ASP ASN TRP ARG SER GLU LEU TYR LYS TYR LYS SEQRES 25 G 317 VAL VAL LYS ILE GLU SEQRES 1 H 230 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 H 230 PRO GLY ALA SER VAL LYS VAL SER CYS GLN ALA SER GLY SEQRES 3 H 230 TYR ARG PHE SER ASN PHE VAL ILE HIS TRP VAL ARG GLN SEQRES 4 H 230 ALA PRO GLY GLN ARG PHE GLU TRP MET GLY TRP ILE ASN SEQRES 5 H 230 PRO TYR ASN GLY ASN LYS GLU PHE SER ALA LYS PHE GLN SEQRES 6 H 230 ASP ARG VAL THR PHE THR ALA ASP THR SER ALA ASN THR SEQRES 7 H 230 ALA TYR MET GLU LEU ARG SER LEU ARG SER ALA ASP THR SEQRES 8 H 230 ALA VAL TYR TYR CYS ALA ARG VAL GLY PRO TYR SER TRP SEQRES 9 H 230 ASP ASP SER PRO GLN ASP ASN TYR TYR MET ASP VAL TRP SEQRES 10 H 230 GLY LYS GLY THR THR VAL ILE VAL SER SER ALA SER THR SEQRES 11 H 230 LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SEQRES 12 H 230 SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL SEQRES 13 H 230 LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SEQRES 14 H 230 SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA SEQRES 15 H 230 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 16 H 230 VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR SEQRES 17 H 230 ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL SEQRES 18 H 230 ASP LYS LYS ALA GLU PRO LYS SER CYS SEQRES 1 L 215 GLU ILE VAL LEU THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 L 215 SER PRO GLY GLU ARG ALA THR PHE SER CYS ARG SER SER SEQRES 3 L 215 HIS SER ILE ARG SER ARG ARG VAL ALA TRP TYR GLN HIS SEQRES 4 L 215 LYS PRO GLY GLN ALA PRO ARG LEU VAL ILE HIS GLY VAL SEQRES 5 L 215 SER ASN ARG ALA SER GLY ILE SER ASP ARG PHE SER GLY SEQRES 6 L 215 SER GLY SER GLY THR ASP PHE THR LEU THR ILE THR ARG SEQRES 7 L 215 VAL GLU PRO GLU ASP PHE ALA LEU TYR TYR CYS GLN VAL SEQRES 8 L 215 TYR GLY ALA SER SER TYR THR PHE GLY GLN GLY THR LYS SEQRES 9 L 215 LEU GLU ARG LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU ARG SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS MODRES 2NY7 ASN G 234 ASN GLYCOSYLATION SITE MODRES 2NY7 ASN G 241 ASN GLYCOSYLATION SITE MODRES 2NY7 ASN G 262 ASN GLYCOSYLATION SITE MODRES 2NY7 ASN G 276 ASN GLYCOSYLATION SITE MODRES 2NY7 ASN G 289 ASN GLYCOSYLATION SITE MODRES 2NY7 ASN G 295 ASN GLYCOSYLATION SITE MODRES 2NY7 ASN G 339 ASN GLYCOSYLATION SITE MODRES 2NY7 ASN G 356 ASN GLYCOSYLATION SITE MODRES 2NY7 ASN G 386 ASN GLYCOSYLATION SITE MODRES 2NY7 ASN G 392 ASN GLYCOSYLATION SITE MODRES 2NY7 ASN G 397 ASN GLYCOSYLATION SITE MODRES 2NY7 ASN G 448 ASN GLYCOSYLATION SITE MODRES 2NY7 ASN G 463 ASN GLYCOSYLATION SITE HET NAG G 734 14 HET NAG G 741 14 HET NAG G 762 14 HET NAG G 776 14 HET NAG G 789 14 HET NAG G 795 14 HET NAG G 839 14 HET NAG G 856 14 HET NAG G 886 14 HET NAG G 892 14 HET NAG G 897 14 HET NAG G 948 14 HET NAG G 963 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 4 NAG 13(C8 H15 N O6) FORMUL 17 HOH *308(H2 O) HELIX 1 1 ASP G 107 SER G 110 5 4 HELIX 2 2 ARG G 335 GLY G 354 1 20 HELIX 3 3 ASP G 368 THR G 373 1 6 HELIX 4 4 SER G 387 PHE G 391 5 5 HELIX 5 5 ARG G 476 SER G 481 1 6 HELIX 6 6 ARG H 28 PHE H 32 5 5 HELIX 7 7 THR H 73 ALA H 75 5 3 HELIX 8 8 ARG H 83 THR H 87 5 5 HELIX 9 9 SER H 163 ALA H 165 5 3 HELIX 10 10 SER H 196 LEU H 198 5 3 HELIX 11 11 LYS H 213 ASN H 216 5 4 HELIX 12 12 GLU L 79 PHE L 83 5 5 HELIX 13 13 SER L 121 SER L 127 1 7 HELIX 14 14 LYS L 183 LYS L 188 1 6 SHEET 1 A 2 GLU G 91 ASN G 94 0 SHEET 2 A 2 THR G 236 CYS G 239 -1 O GLY G 237 N PHE G 93 SHEET 1 B 2 TRP G 112 GLN G 114 0 SHEET 2 B 2 PHE G 210 PRO G 212 -1 O GLU G 211 N ASP G 113 SHEET 1 C 3 VAL G 242 VAL G 245 0 SHEET 2 C 3 PHE G 223 CYS G 228 -1 N LYS G 227 O SER G 243 SHEET 3 C 3 TYR G 486 LYS G 490 -1 O LYS G 487 N LEU G 226 SHEET 1 D 6 LEU G 259 LEU G 261 0 SHEET 2 D 6 CYS G 445 ARG G 456 -1 O THR G 450 N LEU G 260 SHEET 3 D 6 ILE G 284 THR G 297 -1 N CYS G 296 O CYS G 445 SHEET 4 D 6 HIS G 330 ALA G 334 -1 O ASN G 332 N ASN G 295 SHEET 5 D 6 THR G 413 TRP G 427 -1 O ILE G 414 N ILE G 333 SHEET 6 D 6 LYS G 432 ALA G 436 -1 O LYS G 432 N TRP G 427 SHEET 1 E 6 SER G 393 TRP G 395 0 SHEET 2 E 6 THR G 358 PHE G 361 -1 N PHE G 361 O SER G 393 SHEET 3 E 6 SER G 465 PRO G 470 1 O PHE G 468 N ILE G 360 SHEET 4 E 6 CYS G 445 ARG G 456 -1 N THR G 455 O ARG G 469 SHEET 5 E 6 ILE G 284 THR G 297 -1 N CYS G 296 O CYS G 445 SHEET 6 E 6 VAL G 271 ARG G 273 -1 N VAL G 271 O GLN G 287 SHEET 1 F 6 HIS G 374 CYS G 378 0 SHEET 2 F 6 GLU G 381 CYS G 385 -1 O PHE G 383 N PHE G 376 SHEET 3 F 6 THR G 413 TRP G 427 -1 O LYS G 421 N PHE G 382 SHEET 4 F 6 HIS G 330 ALA G 334 -1 N ILE G 333 O ILE G 414 SHEET 5 F 6 ILE G 284 THR G 297 -1 N ASN G 295 O ASN G 332 SHEET 6 F 6 VAL G 271 ARG G 273 -1 N VAL G 271 O GLN G 287 SHEET 1 G 4 GLN H 3 GLN H 6 0 SHEET 2 G 4 VAL H 18 SER H 25 -1 O GLN H 23 N VAL H 5 SHEET 3 G 4 THR H 77 LEU H 82 -1 O MET H 80 N VAL H 20 SHEET 4 G 4 VAL H 67 ASP H 72 -1 N THR H 70 O TYR H 79 SHEET 1 H 6 GLU H 10 LYS H 12 0 SHEET 2 H 6 THR H 107 VAL H 111 1 O ILE H 110 N LYS H 12 SHEET 3 H 6 ALA H 88 ARG H 94 -1 N ALA H 88 O VAL H 109 SHEET 4 H 6 ILE H 34 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 H 6 PHE H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 H 6 LYS H 57 PHE H 59 -1 O GLU H 58 N TRP H 50 SHEET 1 I 4 GLU H 10 LYS H 12 0 SHEET 2 I 4 THR H 107 VAL H 111 1 O ILE H 110 N LYS H 12 SHEET 3 I 4 ALA H 88 ARG H 94 -1 N ALA H 88 O VAL H 109 SHEET 4 I 4 VAL H 102 TRP H 103 -1 O VAL H 102 N ARG H 94 SHEET 1 J 4 SER H 120 LEU H 124 0 SHEET 2 J 4 THR H 137 TYR H 147 -1 O LEU H 143 N PHE H 122 SHEET 3 J 4 TYR H 185 PRO H 194 -1 O VAL H 193 N ALA H 138 SHEET 4 J 4 VAL H 171 THR H 173 -1 N HIS H 172 O VAL H 190 SHEET 1 K 4 THR H 133 SER H 134 0 SHEET 2 K 4 THR H 137 TYR H 147 -1 O THR H 137 N SER H 134 SHEET 3 K 4 TYR H 185 PRO H 194 -1 O VAL H 193 N ALA H 138 SHEET 4 K 4 VAL H 177 LEU H 178 -1 N VAL H 177 O SER H 186 SHEET 1 L 3 THR H 153 TRP H 157 0 SHEET 2 L 3 TYR H 206 HIS H 212 -1 O ASN H 211 N THR H 153 SHEET 3 L 3 THR H 217 ALA H 225 -1 O VAL H 219 N VAL H 210 SHEET 1 M 4 LEU L 4 SER L 7 0 SHEET 2 M 4 ALA L 19 SER L 25 -1 O ARG L 24 N THR L 5 SHEET 3 M 4 ASP L 70 ILE L 75 -1 O LEU L 73 N PHE L 21 SHEET 4 M 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 N 6 THR L 10 LEU L 13 0 SHEET 2 N 6 THR L 102 ARG L 106 1 O LYS L 103 N LEU L 11 SHEET 3 N 6 ALA L 84 VAL L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 N 6 VAL L 33 HIS L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 N 6 ARG L 45 HIS L 49 -1 O ARG L 45 N GLN L 37 SHEET 6 N 6 ASN L 53 ARG L 54 -1 O ASN L 53 N HIS L 49 SHEET 1 O 4 THR L 10 LEU L 13 0 SHEET 2 O 4 THR L 102 ARG L 106 1 O LYS L 103 N LEU L 11 SHEET 3 O 4 ALA L 84 VAL L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 O 4 THR L 97 PHE L 98 -1 O THR L 97 N VAL L 90 SHEET 1 P 4 SER L 114 PHE L 118 0 SHEET 2 P 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 P 4 TYR L 173 SER L 182 -1 O LEU L 175 N LEU L 136 SHEET 4 P 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 Q 4 ALA L 153 LEU L 154 0 SHEET 2 Q 4 ALA L 144 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 Q 4 VAL L 191 HIS L 198 -1 O GLU L 195 N GLN L 147 SHEET 4 Q 4 VAL L 205 ASN L 210 -1 O LYS L 207 N CYS L 194 SSBOND 1 CYS G 96 CYS G 275 1555 1555 2.04 SSBOND 2 CYS G 109 CYS G 428 1555 1555 2.03 SSBOND 3 CYS G 119 CYS G 205 1555 1555 2.03 SSBOND 4 CYS G 218 CYS G 247 1555 1555 2.03 SSBOND 5 CYS G 228 CYS G 239 1555 1555 2.04 SSBOND 6 CYS G 296 CYS G 331 1555 1555 2.04 SSBOND 7 CYS G 378 CYS G 445 1555 1555 2.03 SSBOND 8 CYS G 385 CYS G 418 1555 1555 2.04 SSBOND 9 CYS H 22 CYS H 92 1555 1555 2.04 SSBOND 10 CYS H 142 CYS H 208 1555 1555 2.03 SSBOND 11 CYS H 230 CYS L 214 1555 1555 2.04 SSBOND 12 CYS L 23 CYS L 88 1555 1555 2.07 SSBOND 13 CYS L 134 CYS L 194 1555 1555 2.04 LINK ND2 ASN G 234 C1 NAG G 734 1555 1555 1.44 LINK ND2 ASN G 241 C1 NAG G 741 1555 1555 1.45 LINK ND2 ASN G 262 C1 NAG G 762 1555 1555 1.46 LINK ND2 ASN G 276 C1 NAG G 776 1555 1555 1.44 LINK ND2 ASN G 289 C1 NAG G 789 1555 1555 1.45 LINK ND2 ASN G 295 C1 NAG G 795 1555 1555 1.44 LINK ND2 ASN G 339 C1 NAG G 839 1555 1555 1.44 LINK ND2 ASN G 356 C1 NAG G 856 1555 1555 1.44 LINK ND2 ASN G 386 C1 NAG G 886 1555 1555 1.46 LINK ND2 ASN G 392 C1 NAG G 892 1555 1555 1.44 LINK ND2 ASN G 397 C1 NAG G 897 1555 1555 1.45 LINK ND2 ASN G 448 C1 NAG G 948 1555 1555 1.44 LINK ND2 ASN G 463 C1 NAG G 963 1555 1555 1.44 CISPEP 1 ARG G 252 PRO G 253 0 4.73 CISPEP 2 PHE H 148 PRO H 149 0 -10.26 CISPEP 3 GLU H 150 PRO H 151 0 -3.07 CISPEP 4 SER L 7 PRO L 8 0 -6.33 CISPEP 5 TYR L 140 PRO L 141 0 0.87 CRYST1 101.955 101.955 298.294 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009808 0.005663 0.000000 0.00000 SCALE2 0.000000 0.011326 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003352 0.00000