HEADER TRANSFERASE 27-NOV-06 2O0B TITLE MYCOBACTERIUM TUBERCULOSIS EPSP SYNTHASE IN COMPLEX WITH S3P TITLE 2 (PARTIALLY PHOTOLYZED) COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE SYNTHASE, EPSP SYNTHASE, COMPND 5 EPSPS; COMPND 6 EC: 2.5.1.19; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: AROA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET24B, P7B KEYWDS SHIKIMATE PATHWAY, EPSP SYNTHASE, M.TUBERCULOSIS, TRANSFERASE, KEYWDS 2 STRUCTURAL GENOMICS, MYCOBACTERIUM TUBERCULOSIS STRUCTURAL KEYWDS 3 PROTEOMICS PROJECT, XMTB EXPDTA X-RAY DIFFRACTION AUTHOR G.P.BURENKOV,G.S.KACHALOVA,H.D.BARTUNIK,MYCOBACTERIUM TUBERCULOSIS AUTHOR 2 STRUCTURAL PROTEOMICS PROJECT (XMTB) REVDAT 5 03-APR-24 2O0B 1 REMARK REVDAT 4 27-DEC-23 2O0B 1 REMARK REVDAT 3 18-OCT-17 2O0B 1 REMARK REVDAT 2 24-FEB-09 2O0B 1 VERSN REVDAT 1 08-APR-08 2O0B 0 JRNL AUTH G.S.KACHALOVA,G.P.BURENKOV,N.I.STRIZHOV,M.G.BRUNNING, JRNL AUTH 2 H.D.BARTUNIK JRNL TITL COMPLEX OF 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE WITH JRNL TITL 2 S3P JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 126181 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.128 REMARK 3 R VALUE (WORKING SET) : 0.127 REMARK 3 FREE R VALUE : 0.154 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6661 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.18 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7853 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.81 REMARK 3 BIN R VALUE (WORKING SET) : 0.2450 REMARK 3 BIN FREE R VALUE SET COUNT : 385 REMARK 3 BIN FREE R VALUE : 0.2780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3078 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 606 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.20000 REMARK 3 B22 (A**2) : 0.07000 REMARK 3 B33 (A**2) : 0.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.030 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.032 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.021 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.901 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.983 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.978 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3398 ; 0.022 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3254 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4666 ; 1.997 ; 1.986 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7504 ; 1.705 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 456 ; 5.695 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 123 ;29.828 ;21.626 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 517 ;12.277 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 39 ;16.798 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 564 ; 0.136 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3840 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 682 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 704 ; 0.240 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3342 ; 0.199 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1661 ; 0.173 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2099 ; 0.094 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 410 ; 0.247 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.034 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 13 ; 0.186 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 73 ; 0.314 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 75 ; 0.231 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2837 ; 2.332 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 917 ; 1.233 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3617 ; 2.797 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1260 ; 3.728 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1048 ; 5.034 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3708 ; 2.363 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3025 ; 4.987 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2O0B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1000040525. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MPG/DESY, HAMBURG REMARK 200 BEAMLINE : BW6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.05 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : AU-COATED PLANAR; TOROIDAL REMARK 200 MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 133042 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.150 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.49700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1G6LT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE ; 30%PEG 6000; REMARK 280 5MM S3P, PH 7.2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.29600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.83950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.39700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.83950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.29600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.39700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 425 REMARK 465 GLY A 426 REMARK 465 GLN A 427 REMARK 465 GLY A 428 REMARK 465 TRP A 429 REMARK 465 GLY A 430 REMARK 465 TYR A 431 REMARK 465 PRO A 432 REMARK 465 GLN A 433 REMARK 465 PRO A 434 REMARK 465 ARG A 435 REMARK 465 SER A 436 REMARK 465 GLY A 437 REMARK 465 GLN A 438 REMARK 465 ARG A 439 REMARK 465 ALA A 440 REMARK 465 ARG A 441 REMARK 465 ARG A 442 REMARK 465 ALA A 443 REMARK 465 THR A 444 REMARK 465 GLY A 445 REMARK 465 GLN A 446 REMARK 465 GLY A 447 REMARK 465 SER A 448 REMARK 465 GLY A 449 REMARK 465 GLY A 450 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 81 CD NE CZ NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER A 154 O HOH A 1220 1.07 REMARK 500 OD1 ASN A 152 O HOH A 1138 1.50 REMARK 500 O HOH A 804 O HOH A 805 1.52 REMARK 500 O HOH A 959 O HOH A 1365 1.86 REMARK 500 C SER A 154 O HOH A 1220 1.86 REMARK 500 O HOH A 1296 O HOH A 1357 1.89 REMARK 500 O HOH A 1188 O HOH A 1296 1.94 REMARK 500 O HOH A 1148 O HOH A 1374 2.02 REMARK 500 O HOH A 1181 O HOH A 1283 2.03 REMARK 500 O HOH A 1143 O HOH A 1277 2.07 REMARK 500 O HOH A 1016 O HOH A 1394 2.08 REMARK 500 O ARG A 150 O HOH A 1224 2.11 REMARK 500 O HOH A 1058 O HOH A 1282 2.14 REMARK 500 O PRO A 86 O HOH A 1054 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1028 O HOH A 1097 3555 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 154 C LEU A 155 N 0.144 REMARK 500 GLY A 157 N GLY A 157 CA 0.119 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 134 NE - CZ - NH1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG A 134 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 SER A 154 CA - C - N ANGL. DEV. = -13.6 DEGREES REMARK 500 GLY A 157 N - CA - C ANGL. DEV. = -15.3 DEGREES REMARK 500 PHE A 181 CB - CG - CD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 PHE A 181 CB - CG - CD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ASP A 215 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG A 233 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG A 264 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG A 264 NE - CZ - NH2 ANGL. DEV. = -4.9 DEGREES REMARK 500 ASP A 305 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 83 66.89 -150.95 REMARK 500 ILE A 126 -31.43 -152.39 REMARK 500 ARG A 150 72.45 -107.94 REMARK 500 ASN A 152 59.59 -113.91 REMARK 500 SER A 192 -131.69 -89.87 REMARK 500 SER A 289 11.17 59.73 REMARK 500 ASP A 300 -168.75 -100.75 REMARK 500 VAL A 309 51.27 -140.90 REMARK 500 HIS A 340 -168.78 -79.70 REMARK 500 ASP A 343 96.41 -67.08 REMARK 500 LEU A 412 70.08 -158.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE S3P A 702 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: RV3227 RELATED DB: TARGETDB REMARK 900 RELATED ID: 1G6T RELATED DB: PDB REMARK 900 EPSP SYNTHASE REMARK 900 RELATED ID: 2BJB RELATED DB: PDB REMARK 900 EPSP SYNTHASE REMARK 900 RELATED ID: 2O0D RELATED DB: PDB REMARK 900 RELATED ID: 2O0E RELATED DB: PDB REMARK 900 RELATED ID: 2O0X RELATED DB: PDB REMARK 900 RELATED ID: 2O0Z RELATED DB: PDB REMARK 900 RELATED ID: 2O15 RELATED DB: PDB DBREF 2O0B A 1 450 UNP P22487 AROA_MYCTU 1 450 SEQRES 1 A 450 MET LYS THR TRP PRO ALA PRO THR ALA PRO THR PRO VAL SEQRES 2 A 450 ARG ALA THR VAL THR VAL PRO GLY SER LYS SER GLN THR SEQRES 3 A 450 ASN ARG ALA LEU VAL LEU ALA ALA LEU ALA ALA ALA GLN SEQRES 4 A 450 GLY ARG GLY ALA SER THR ILE SER GLY ALA LEU ARG SER SEQRES 5 A 450 ARG ASP THR GLU LEU MET LEU ASP ALA LEU GLN THR LEU SEQRES 6 A 450 GLY LEU ARG VAL ASP GLY VAL GLY SER GLU LEU THR VAL SEQRES 7 A 450 SER GLY ARG ILE GLU PRO GLY PRO GLY ALA ARG VAL ASP SEQRES 8 A 450 CYS GLY LEU ALA GLY THR VAL LEU ARG PHE VAL PRO PRO SEQRES 9 A 450 LEU ALA ALA LEU GLY SER VAL PRO VAL THR PHE ASP GLY SEQRES 10 A 450 ASP GLN GLN ALA ARG GLY ARG PRO ILE ALA PRO LEU LEU SEQRES 11 A 450 ASP ALA LEU ARG GLU LEU GLY VAL ALA VAL ASP GLY THR SEQRES 12 A 450 GLY LEU PRO PHE ARG VAL ARG GLY ASN GLY SER LEU ALA SEQRES 13 A 450 GLY GLY THR VAL ALA ILE ASP ALA SER ALA SER SER GLN SEQRES 14 A 450 PHE VAL SER GLY LEU LEU LEU SER ALA ALA SER PHE THR SEQRES 15 A 450 ASP GLY LEU THR VAL GLN HIS THR GLY SER SER LEU PRO SEQRES 16 A 450 SER ALA PRO HIS ILE ALA MET THR ALA ALA MET LEU ARG SEQRES 17 A 450 GLN ALA GLY VAL ASP ILE ASP ASP SER THR PRO ASN ARG SEQRES 18 A 450 TRP GLN VAL ARG PRO GLY PRO VAL ALA ALA ARG ARG TRP SEQRES 19 A 450 ASP ILE GLU PRO ASP LEU THR ASN ALA VAL ALA PHE LEU SEQRES 20 A 450 SER ALA ALA VAL VAL SER GLY GLY THR VAL ARG ILE THR SEQRES 21 A 450 GLY TRP PRO ARG VAL SER VAL GLN PRO ALA ASP HIS ILE SEQRES 22 A 450 LEU ALA ILE LEU ARG GLN LEU ASN ALA VAL VAL ILE HIS SEQRES 23 A 450 ALA ASP SER SER LEU GLU VAL ARG GLY PRO THR GLY TYR SEQRES 24 A 450 ASP GLY PHE ASP VAL ASP LEU ARG ALA VAL GLY GLU LEU SEQRES 25 A 450 THR PRO SER VAL ALA ALA LEU ALA ALA LEU ALA SER PRO SEQRES 26 A 450 GLY SER VAL SER ARG LEU SER GLY ILE ALA HIS LEU ARG SEQRES 27 A 450 GLY HIS GLU THR ASP ARG LEU ALA ALA LEU SER THR GLU SEQRES 28 A 450 ILE ASN ARG LEU GLY GLY THR CYS ARG GLU THR PRO ASP SEQRES 29 A 450 GLY LEU VAL ILE THR ALA THR PRO LEU ARG PRO GLY ILE SEQRES 30 A 450 TRP ARG ALA TYR ALA ASP HIS ARG MET ALA MET ALA GLY SEQRES 31 A 450 ALA ILE ILE GLY LEU ARG VAL ALA GLY VAL GLU VAL ASP SEQRES 32 A 450 ASP ILE ALA ALA THR THR LYS THR LEU PRO GLU PHE PRO SEQRES 33 A 450 ARG LEU TRP ALA GLU MET VAL GLY PRO GLY GLN GLY TRP SEQRES 34 A 450 GLY TYR PRO GLN PRO ARG SER GLY GLN ARG ALA ARG ARG SEQRES 35 A 450 ALA THR GLY GLN GLY SER GLY GLY HET PO4 A 701 5 HET SO4 A 801 5 HET SO4 A 802 5 HET SO4 A 803 5 HET S3P A 702 16 HETNAM PO4 PHOSPHATE ION HETNAM SO4 SULFATE ION HETNAM S3P SHIKIMATE-3-PHOSPHATE FORMUL 2 PO4 O4 P 3- FORMUL 3 SO4 3(O4 S 2-) FORMUL 6 S3P C7 H11 O8 P FORMUL 7 HOH *606(H2 O) HELIX 1 1 SER A 22 GLN A 39 1 18 HELIX 2 2 SER A 52 LEU A 65 1 14 HELIX 3 3 ALA A 95 ALA A 107 1 13 HELIX 4 4 ASP A 118 ARG A 124 5 7 HELIX 5 5 ILE A 126 LEU A 136 1 11 HELIX 6 6 SER A 168 ALA A 178 1 11 HELIX 7 7 ALA A 179 PHE A 181 5 3 HELIX 8 8 SER A 196 ALA A 210 1 15 HELIX 9 9 ASP A 239 GLY A 254 1 16 HELIX 10 10 PRO A 269 LEU A 280 1 12 HELIX 11 11 VAL A 309 GLU A 311 5 3 HELIX 12 12 LEU A 312 LEU A 322 1 11 HELIX 13 13 ILE A 334 HIS A 340 5 7 HELIX 14 14 ASP A 343 LEU A 355 1 13 HELIX 15 15 ASP A 383 LEU A 395 1 13 HELIX 16 16 ASP A 404 THR A 411 5 8 HELIX 17 17 GLU A 414 GLY A 424 1 11 SHEET 1 A 3 TRP A 4 PRO A 5 0 SHEET 2 A 3 VAL A 400 VAL A 402 -1 O VAL A 402 N TRP A 4 SHEET 3 A 3 GLY A 376 TRP A 378 1 N TRP A 378 O GLU A 401 SHEET 1 B 4 ARG A 14 VAL A 17 0 SHEET 2 B 4 THR A 256 ILE A 259 1 O ARG A 258 N VAL A 17 SHEET 3 B 4 SER A 290 ARG A 294 -1 O VAL A 293 N VAL A 257 SHEET 4 B 4 VAL A 283 ALA A 287 -1 N ILE A 285 O GLU A 292 SHEET 1 C 4 ARG A 68 ASP A 70 0 SHEET 2 C 4 LEU A 76 SER A 79 -1 O SER A 79 N ARG A 68 SHEET 3 C 4 SER A 44 SER A 47 -1 N ILE A 46 O LEU A 76 SHEET 4 C 4 TRP A 234 ASP A 235 1 O TRP A 234 N SER A 47 SHEET 1 D 4 ARG A 89 ASP A 91 0 SHEET 2 D 4 PRO A 112 ASP A 116 1 O THR A 114 N VAL A 90 SHEET 3 D 4 PHE A 147 ARG A 150 -1 O PHE A 147 N PHE A 115 SHEET 4 D 4 ALA A 139 ASP A 141 -1 N ALA A 139 O ARG A 150 SHEET 1 E 4 GLY A 158 ILE A 162 0 SHEET 2 E 4 LEU A 185 HIS A 189 1 O GLN A 188 N ILE A 162 SHEET 3 E 4 ARG A 221 VAL A 224 -1 O VAL A 224 N LEU A 185 SHEET 4 E 4 ILE A 214 ASP A 215 -1 N ASP A 215 O GLN A 223 SHEET 1 F 4 ASP A 303 ASP A 305 0 SHEET 2 F 4 VAL A 328 SER A 332 1 O ARG A 330 N VAL A 304 SHEET 3 F 4 GLY A 365 THR A 369 -1 O LEU A 366 N LEU A 331 SHEET 4 F 4 THR A 358 THR A 362 -1 N ARG A 360 O VAL A 367 CISPEP 1 LEU A 145 PRO A 146 0 -10.14 SITE 1 AC1 10 ALA A 166 SER A 167 SER A 168 PRO A 195 SITE 2 AC1 10 SER A 196 HIS A 336 HIS A 340 HOH A 898 SITE 3 AC1 10 HOH A 916 HOH A 986 SITE 1 AC2 11 LYS A 23 LEU A 94 GLY A 96 THR A 97 SITE 2 AC2 11 ARG A 124 GLN A 169 GLU A 341 LYS A 410 SITE 3 AC2 11 HOH A 832 HOH A 898 HOH A 985 SITE 1 AC3 9 ARG A 68 GLY A 142 THR A 143 GLY A 144 SITE 2 AC3 9 HOH A 874 HOH A 954 HOH A 957 HOH A1052 SITE 3 AC3 9 HOH A1236 SITE 1 AC4 10 ARG A 264 LEU A 274 ARG A 278 HIS A 286 SITE 2 AC4 10 ARG A 354 ARG A 379 HOH A 842 HOH A 946 SITE 3 AC4 10 HOH A1226 HOH A1254 SITE 1 AC5 18 LYS A 23 SER A 24 ARG A 28 SER A 167 SITE 2 AC5 18 SER A 168 GLN A 169 SER A 196 HIS A 199 SITE 3 AC5 18 GLU A 311 HIS A 336 HIS A 340 HOH A 805 SITE 4 AC5 18 HOH A 810 HOH A 886 HOH A 898 HOH A 916 SITE 5 AC5 18 HOH A 985 HOH A 986 CRYST1 40.592 72.794 127.679 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024635 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013737 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007832 0.00000