HEADER TRANSFERASE 28-NOV-06 2O1B TITLE STRUCTURE OF AMINOTRANSFERASE FROM STAPHYLOCOCCUS AUREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINOTRANSFERASE, CLASS I; COMPND 3 CHAIN: A; COMPND 4 EC: 2.6.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 STRAIN: COLA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS AMINOTRASFERASE, CLASS I, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.E.MCGRATH,A.DHARAMSI,D.THAMBIPILLAI,A.M.EDWARDS,E.F.PAI, AUTHOR 2 N.Y.CHIRGADZE REVDAT 4 27-DEC-23 2O1B 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 2O1B 1 VERSN REVDAT 2 24-FEB-09 2O1B 1 VERSN REVDAT 1 12-DEC-06 2O1B 0 JRNL AUTH T.E.MCGRATH,A.DHARAMSI,D.THAMBIPILLAI,A.M.EDWARDS,E.F.PAI, JRNL AUTH 2 N.Y.CHIRGADZE JRNL TITL STRUCTURE OF AMINOTRANSFERASE FROM STAPHYLOCOCCUS AUREUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.2 REMARK 3 NUMBER OF REFLECTIONS : 21132 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1119 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1262 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 74.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.2110 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.2730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2956 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 271 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.99000 REMARK 3 B22 (A**2) : 1.90000 REMARK 3 B33 (A**2) : -1.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.88000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.235 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.184 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.126 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.200 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3085 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4204 ; 1.250 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 386 ; 5.967 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 146 ;37.064 ;25.342 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 498 ;16.351 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;19.086 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 453 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2397 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1587 ; 0.218 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2119 ; 0.311 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 260 ; 0.154 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 87 ; 0.277 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 28 ; 0.147 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1942 ; 0.511 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3059 ; 0.841 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1299 ; 1.355 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1140 ; 2.020 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 15 REMARK 3 ORIGIN FOR THE GROUP (A): 12.6369 -39.8155 3.9740 REMARK 3 T TENSOR REMARK 3 T11: 0.0528 T22: 0.0828 REMARK 3 T33: 0.0287 T12: 0.0778 REMARK 3 T13: -0.0034 T23: -0.0419 REMARK 3 L TENSOR REMARK 3 L11: 13.4994 L22: 25.7706 REMARK 3 L33: 17.1080 L12: 9.0523 REMARK 3 L13: -9.1994 L23: -11.6335 REMARK 3 S TENSOR REMARK 3 S11: 0.5160 S12: -0.3924 S13: -0.9938 REMARK 3 S21: 0.2531 S22: -0.9441 S23: -1.5964 REMARK 3 S31: -0.0736 S32: 0.7327 S33: 0.4281 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 23 A 384 REMARK 3 ORIGIN FOR THE GROUP (A): 12.8316 -27.6412 -13.1210 REMARK 3 T TENSOR REMARK 3 T11: -0.0657 T22: -0.1191 REMARK 3 T33: -0.1085 T12: 0.0057 REMARK 3 T13: -0.0065 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 1.4470 L22: 0.7591 REMARK 3 L33: 0.8202 L12: -0.5930 REMARK 3 L13: -0.4540 L23: -0.0044 REMARK 3 S TENSOR REMARK 3 S11: 0.0162 S12: 0.0355 S13: 0.0693 REMARK 3 S21: -0.0131 S22: -0.0130 S23: -0.1080 REMARK 3 S31: 0.0122 S32: 0.0641 S33: -0.0032 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2O1B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-NOV-06. REMARK 100 THE DEPOSITION ID IS D_1000040561. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 32-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795, 0.9796, 0.9642 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21132 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.19700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 54.65550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.15350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 54.65550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.15350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER GENERATED BY THE REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 5830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 486 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 585 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 LYS A 16 REMARK 465 THR A 17 REMARK 465 MSE A 18 REMARK 465 GLY A 19 REMARK 465 ARG A 20 REMARK 465 LYS A 21 REMARK 465 ILE A 22 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 537 O HOH A 620 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 12 109.62 -56.69 REMARK 500 ILE A 36 121.18 77.51 REMARK 500 PRO A 37 160.44 -43.89 REMARK 500 ALA A 210 140.66 -174.06 REMARK 500 ARG A 241 65.98 70.56 REMARK 500 ASN A 248 118.18 -36.88 REMARK 500 ASP A 365 126.08 -23.02 REMARK 500 ASP A 366 6.61 -63.24 REMARK 500 GLN A 367 -87.23 -103.28 REMARK 500 LYS A 368 -57.79 -11.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP A 400 DBREF 2O1B A 2 384 UNP Q5HCZ0 Q5HCZ0_STAAC 2 384 SEQADV 2O1B MSE A -19 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B GLY A -18 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B SER A -17 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B SER A -16 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B HIS A -15 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B HIS A -14 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B HIS A -13 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B HIS A -12 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B HIS A -11 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B HIS A -10 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B SER A -9 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B SER A -8 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B GLY A -7 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B LEU A -6 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B VAL A -5 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B PRO A -4 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B ARG A -3 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B GLY A -2 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B SER A -1 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B HIS A 0 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B MSE A 1 UNP Q5HCZ0 CLONING ARTIFACT SEQADV 2O1B MSE A 18 UNP Q5HCZ0 MET 18 MODIFIED RESIDUE SEQADV 2O1B MSE A 32 UNP Q5HCZ0 MET 32 MODIFIED RESIDUE SEQADV 2O1B MSE A 237 UNP Q5HCZ0 MET 237 MODIFIED RESIDUE SEQADV 2O1B MSE A 251 UNP Q5HCZ0 MET 251 MODIFIED RESIDUE SEQADV 2O1B MSE A 266 UNP Q5HCZ0 MET 266 MODIFIED RESIDUE SEQADV 2O1B MSE A 302 UNP Q5HCZ0 MET 302 MODIFIED RESIDUE SEQRES 1 A 404 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 404 LEU VAL PRO ARG GLY SER HIS MSE ILE SER ASN LYS LEU SEQRES 3 A 404 ALA ASN ILE PRO ASP SER TYR PHE GLY LYS THR MSE GLY SEQRES 4 A 404 ARG LYS ILE GLU HIS GLY PRO LEU PRO LEU ILE ASN MSE SEQRES 5 A 404 ALA VAL GLY ILE PRO ASP GLY PRO THR PRO GLN GLY ILE SEQRES 6 A 404 ILE ASP HIS PHE GLN LYS ALA LEU THR ILE PRO GLU ASN SEQRES 7 A 404 GLN LYS TYR GLY ALA PHE HIS GLY LYS GLU ALA PHE LYS SEQRES 8 A 404 GLN ALA ILE VAL ASP PHE TYR GLN ARG GLN TYR ASN VAL SEQRES 9 A 404 THR LEU ASP LYS GLU ASP GLU VAL CYS ILE LEU TYR GLY SEQRES 10 A 404 THR LYS ASN GLY LEU VAL ALA VAL PRO THR CYS VAL ILE SEQRES 11 A 404 ASN PRO GLY ASP TYR VAL LEU LEU PRO ASP PRO GLY TYR SEQRES 12 A 404 THR ASP TYR LEU ALA GLY VAL LEU LEU ALA ASP GLY LYS SEQRES 13 A 404 PRO VAL PRO LEU ASN LEU GLU PRO PRO HIS TYR LEU PRO SEQRES 14 A 404 ASP TRP SER LYS VAL ASP SER GLN ILE ILE ASP LYS THR SEQRES 15 A 404 LYS LEU ILE TYR LEU THR TYR PRO ASN ASN PRO THR GLY SEQRES 16 A 404 SER THR ALA THR LYS GLU VAL PHE ASP GLU ALA ILE ALA SEQRES 17 A 404 LYS PHE LYS GLY THR ASP THR LYS ILE VAL HIS ASP PHE SEQRES 18 A 404 ALA TYR GLY ALA PHE GLY PHE ASP ALA LYS ASN PRO SER SEQRES 19 A 404 ILE LEU ALA SER GLU ASN GLY LYS ASP VAL ALA ILE GLU SEQRES 20 A 404 ILE TYR SER LEU SER LYS GLY TYR ASN MSE SER GLY PHE SEQRES 21 A 404 ARG VAL GLY PHE ALA VAL GLY ASN LYS ASP MSE ILE GLN SEQRES 22 A 404 ALA LEU LYS LYS TYR GLN THR HIS THR ASN ALA GLY MSE SEQRES 23 A 404 PHE GLY ALA LEU GLN ASP ALA ALA ILE TYR ALA LEU ASN SEQRES 24 A 404 HIS TYR ASP ASP PHE LEU GLU GLU GLN SER ASN VAL PHE SEQRES 25 A 404 LYS THR ARG ARG ASP ARG PHE GLU ALA MSE LEU ALA LYS SEQRES 26 A 404 ALA ASP LEU PRO PHE VAL HIS ALA LYS GLY GLY ILE TYR SEQRES 27 A 404 VAL TRP LEU GLU THR PRO PRO GLY TYR ASP SER GLU GLN SEQRES 28 A 404 PHE GLU GLN PHE LEU VAL GLN GLU LYS SER ILE LEU VAL SEQRES 29 A 404 ALA PRO GLY LYS PRO PHE GLY GLU ASN GLY ASN ARG TYR SEQRES 30 A 404 VAL ARG ILE SER LEU ALA LEU ASP ASP GLN LYS LEU ASP SEQRES 31 A 404 GLU ALA ALA ILE ARG LEU THR GLU LEU ALA TYR LEU TYR SEQRES 32 A 404 GLU MODRES 2O1B MSE A 32 MET SELENOMETHIONINE MODRES 2O1B MSE A 237 MET SELENOMETHIONINE MODRES 2O1B MSE A 251 MET SELENOMETHIONINE MODRES 2O1B MSE A 266 MET SELENOMETHIONINE MODRES 2O1B MSE A 302 MET SELENOMETHIONINE HET MSE A 32 8 HET MSE A 237 8 HET MSE A 251 8 HET MSE A 266 8 HET MSE A 302 8 HET PLP A 400 15 HETNAM MSE SELENOMETHIONINE HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 PLP C8 H10 N O6 P FORMUL 3 HOH *271(H2 O) HELIX 1 1 SER A 3 ASN A 8 1 6 HELIX 2 2 PRO A 42 LEU A 53 1 12 HELIX 3 3 ILE A 55 LYS A 60 1 6 HELIX 4 4 LYS A 67 ASN A 83 1 17 HELIX 5 5 GLY A 97 ILE A 110 1 14 HELIX 6 6 ASP A 125 ALA A 133 1 9 HELIX 7 7 ASP A 150 VAL A 154 5 5 HELIX 8 8 ASP A 155 LYS A 161 1 7 HELIX 9 9 THR A 179 LYS A 191 1 13 HELIX 10 10 SER A 214 SER A 218 5 5 HELIX 11 11 ASN A 220 VAL A 224 1 5 HELIX 12 12 MSE A 237 ARG A 241 5 5 HELIX 13 13 ASN A 248 ASN A 263 1 16 HELIX 14 14 PHE A 267 TYR A 281 1 15 HELIX 15 15 TYR A 281 ALA A 306 1 26 HELIX 16 16 ASP A 328 SER A 341 1 14 HELIX 17 17 LYS A 348 ASN A 355 5 8 HELIX 18 18 GLN A 367 GLU A 378 1 12 HELIX 19 19 LEU A 379 GLU A 384 5 6 SHEET 1 A 2 ILE A 30 ASN A 31 0 SHEET 2 A 2 ILE A 342 LEU A 343 1 O LEU A 343 N ILE A 30 SHEET 1 B 7 VAL A 92 LEU A 95 0 SHEET 2 B 7 GLY A 243 GLY A 247 -1 O ALA A 245 N CYS A 93 SHEET 3 B 7 ALA A 225 SER A 230 -1 N GLU A 227 O VAL A 246 SHEET 4 B 7 LYS A 196 ASP A 200 1 N HIS A 199 O ILE A 228 SHEET 5 B 7 THR A 162 LEU A 167 1 N LEU A 167 O ASP A 200 SHEET 6 B 7 TYR A 115 ASP A 120 1 N TYR A 115 O LYS A 163 SHEET 7 B 7 LYS A 136 ASN A 141 1 O LEU A 140 N LEU A 118 SHEET 1 C 4 PHE A 310 VAL A 311 0 SHEET 2 C 4 TYR A 318 GLU A 322 -1 O TRP A 320 N VAL A 311 SHEET 3 C 4 TYR A 357 SER A 361 -1 O VAL A 358 N LEU A 321 SHEET 4 C 4 ALA A 345 PRO A 346 -1 N ALA A 345 O ARG A 359 LINK C ASN A 31 N MSE A 32 1555 1555 1.33 LINK C MSE A 32 N ALA A 33 1555 1555 1.33 LINK NZ LYS A 233 C4A PLP A 400 1555 1555 1.79 LINK C ASN A 236 N MSE A 237 1555 1555 1.33 LINK C MSE A 237 N SER A 238 1555 1555 1.34 LINK C ASP A 250 N MSE A 251 1555 1555 1.33 LINK C MSE A 251 N ILE A 252 1555 1555 1.33 LINK C GLY A 265 N MSE A 266 1555 1555 1.33 LINK C MSE A 266 N PHE A 267 1555 1555 1.33 LINK C ALA A 301 N MSE A 302 1555 1555 1.33 LINK C MSE A 302 N LEU A 303 1555 1555 1.33 CISPEP 1 ASP A 120 PRO A 121 0 5.12 CISPEP 2 PRO A 144 PRO A 145 0 2.97 CISPEP 3 TYR A 169 PRO A 170 0 0.17 CISPEP 4 ASN A 172 PRO A 173 0 21.41 SITE 1 AC1 14 TYR A 61 THR A 98 LYS A 99 LEU A 102 SITE 2 AC1 14 TYR A 123 ASN A 172 ASP A 200 ALA A 202 SITE 3 AC1 14 TYR A 203 SER A 230 SER A 232 LYS A 233 SITE 4 AC1 14 ARG A 241 HOH A 606 CRYST1 109.311 56.307 73.401 90.00 130.31 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009148 0.000000 0.007760 0.00000 SCALE2 0.000000 0.017760 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017865 0.00000