HEADER VIRAL PROTEIN 29-NOV-06 2O1J TITLE STRUCTURE OF THE EXTENDED DIARRHEA-INDUCING DOMAIN OF ROTAVIRUS TITLE 2 ENTEROTOXIGENIC PROTEIN NSP4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NONSTRUCTURAL PROTEIN NSP4; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: DIARRHEA-INDUCING DOMAIN (RESIDUES 95-146); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ROTAVIRUS STR.; SOURCE 3 ORGANISM_TAXID: 12578; SOURCE 4 STRAIN: I321; SOURCE 5 GENE: G10; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B+ KEYWDS ROTAVIRUS ENTEROTOXIN, NON STRUCTURAL PROTEIN, NSP4, TETRAMERIC KEYWDS 2 COILED COIL, VIRULENCE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.SUGUNA,C.DURGA RAO,R.DEEPA REVDAT 6 03-APR-24 2O1J 1 REMARK REVDAT 5 27-DEC-23 2O1J 1 REMARK LINK REVDAT 4 18-OCT-17 2O1J 1 REMARK REVDAT 3 13-JUL-11 2O1J 1 VERSN REVDAT 2 24-FEB-09 2O1J 1 VERSN REVDAT 1 26-DEC-06 2O1J 0 JRNL AUTH R.DEEPA,C.DURGA RAO,K.SUGUNA JRNL TITL STRUCTURE OF THE EXTENDED DIARRHEA-INDUCING DOMAIN OF JRNL TITL 2 ROTAVIRUS ENTEROTOXIGENIC PROTEIN NSP4 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0009 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 3 NUMBER OF REFLECTIONS : 5545 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.251 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.314 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 269 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 385 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.3350 REMARK 3 BIN FREE R VALUE SET COUNT : 11 REMARK 3 BIN FREE R VALUE : 0.4860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1328 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 11 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.73000 REMARK 3 B22 (A**2) : -4.41000 REMARK 3 B33 (A**2) : 3.68000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.863 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.431 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.317 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 33.786 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.890 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1328 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1786 ; 1.991 ; 1.995 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 170 ; 6.860 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 50 ;34.270 ;24.800 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 271 ;25.689 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;19.414 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 234 ; 0.117 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 907 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 730 ; 0.293 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 936 ; 0.320 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 53 ; 0.231 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 2 ; 0.106 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 27 ; 0.266 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.204 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 902 ; 0.701 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1380 ; 1.257 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 481 ; 2.033 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 406 ; 3.640 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 95 A 138 REMARK 3 ORIGIN FOR THE GROUP (A): 39.0150 126.5320 29.9490 REMARK 3 T TENSOR REMARK 3 T11: 0.0538 T22: 0.2625 REMARK 3 T33: 0.0576 T12: -0.0354 REMARK 3 T13: -0.0562 T23: -0.0270 REMARK 3 L TENSOR REMARK 3 L11: 3.1940 L22: 39.8222 REMARK 3 L33: 3.4030 L12: -8.4567 REMARK 3 L13: -0.3657 L23: 6.7769 REMARK 3 S TENSOR REMARK 3 S11: -0.2082 S12: -0.2913 S13: -0.1426 REMARK 3 S21: 0.7524 S22: 0.4128 S23: -0.2181 REMARK 3 S31: 0.1172 S32: 0.2369 S33: -0.2045 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 95 B 137 REMARK 3 ORIGIN FOR THE GROUP (A): 41.1460 125.5640 21.4380 REMARK 3 T TENSOR REMARK 3 T11: 0.0672 T22: 0.1855 REMARK 3 T33: -0.0706 T12: 0.0359 REMARK 3 T13: -0.0954 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 3.3818 L22: 70.2727 REMARK 3 L33: 4.3135 L12: 8.5746 REMARK 3 L13: 2.1395 L23: 14.2989 REMARK 3 S TENSOR REMARK 3 S11: -0.1604 S12: 0.1836 S13: -0.0419 REMARK 3 S21: -0.5455 S22: 0.3780 S23: -0.3940 REMARK 3 S31: 0.0117 S32: 0.2227 S33: -0.2175 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 95 C 138 REMARK 3 ORIGIN FOR THE GROUP (A): 32.6290 126.4810 19.7640 REMARK 3 T TENSOR REMARK 3 T11: 0.1379 T22: 0.2866 REMARK 3 T33: 0.0486 T12: 0.0034 REMARK 3 T13: -0.0740 T23: -0.1222 REMARK 3 L TENSOR REMARK 3 L11: 3.6370 L22: 28.5205 REMARK 3 L33: 2.2097 L12: 5.8179 REMARK 3 L13: -0.0292 L23: -4.3200 REMARK 3 S TENSOR REMARK 3 S11: -0.0222 S12: 0.3527 S13: -0.4012 REMARK 3 S21: -0.2823 S22: 0.4219 S23: -0.2896 REMARK 3 S31: 0.2090 S32: -0.2123 S33: -0.3997 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 95 D 137 REMARK 3 ORIGIN FOR THE GROUP (A): 30.5120 125.6500 28.3320 REMARK 3 T TENSOR REMARK 3 T11: 0.0215 T22: 0.1970 REMARK 3 T33: -0.0030 T12: -0.0554 REMARK 3 T13: 0.0083 T23: -0.0819 REMARK 3 L TENSOR REMARK 3 L11: 3.9178 L22: 43.2512 REMARK 3 L33: 3.8934 L12: -6.5867 REMARK 3 L13: 2.3088 L23: -9.6404 REMARK 3 S TENSOR REMARK 3 S11: -0.3398 S12: -0.2835 S13: -0.2201 REMARK 3 S21: 0.7731 S22: 0.4897 S23: 0.4449 REMARK 3 S31: 0.0849 S32: -0.2914 S33: -0.1499 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2O1J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-NOV-06. REMARK 100 THE DEPOSITION ID IS D_1000040569. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JAN-06 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : CU KALPHA REMARK 200 OPTICS : OSMIC MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5847 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 37.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.43900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 201K REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M POTASSIUM SODIUM TETRA HYDRATE, REMARK 280 0.1M HEPES, KOH, PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 24.34550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 24.34550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 24.30700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 90.21600 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 24.30700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 90.21600 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 24.34550 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 24.30700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 90.21600 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 24.34550 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 24.30700 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 90.21600 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -97.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 139 REMARK 465 ASP A 140 REMARK 465 GLU A 141 REMARK 465 ILE A 142 REMARK 465 ASP A 143 REMARK 465 MET A 144 REMARK 465 THR A 145 REMARK 465 LYS A 146 REMARK 465 THR B 138 REMARK 465 ALA B 139 REMARK 465 ASP B 140 REMARK 465 GLU B 141 REMARK 465 ILE B 142 REMARK 465 ASP B 143 REMARK 465 MET B 144 REMARK 465 THR B 145 REMARK 465 LYS B 146 REMARK 465 ALA C 139 REMARK 465 ASP C 140 REMARK 465 GLU C 141 REMARK 465 ILE C 142 REMARK 465 ASP C 143 REMARK 465 MET C 144 REMARK 465 THR C 145 REMARK 465 LYS C 146 REMARK 465 THR D 138 REMARK 465 ALA D 139 REMARK 465 ASP D 140 REMARK 465 GLU D 141 REMARK 465 ILE D 142 REMARK 465 ASP D 143 REMARK 465 MET D 144 REMARK 465 THR D 145 REMARK 465 LYS D 146 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 95 CG1 CG2 CD1 REMARK 470 GLU A 96 CG CD OE1 OE2 REMARK 470 THR A 97 OG1 CG2 REMARK 470 GLN A 98 CG CD OE1 NE2 REMARK 470 ARG A 101 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 ARG A 107 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 108 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 137 CG CD NE CZ NH1 NH2 REMARK 470 THR A 138 OG1 CG2 REMARK 470 ILE B 95 CG1 CG2 CD1 REMARK 470 GLU B 96 CG CD OE1 OE2 REMARK 470 THR B 97 OG1 CG2 REMARK 470 GLN B 98 CG CD OE1 NE2 REMARK 470 ARG B 101 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 104 CG CD CE NZ REMARK 470 GLU B 105 CG CD OE1 OE2 REMARK 470 GLU B 125 CG CD OE1 OE2 REMARK 470 ARG B 137 CG CD NE CZ NH1 NH2 REMARK 470 ILE C 95 CG1 CG2 CD1 REMARK 470 GLU C 96 CG CD OE1 OE2 REMARK 470 THR C 97 OG1 CG2 REMARK 470 GLN C 98 CG CD OE1 NE2 REMARK 470 ARG C 101 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 104 CG CD CE NZ REMARK 470 GLU C 105 CG CD OE1 OE2 REMARK 470 ARG C 107 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 108 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 125 CG CD OE1 OE2 REMARK 470 ARG C 137 CG CD NE CZ NH1 NH2 REMARK 470 THR C 138 OG1 CG2 REMARK 470 ILE D 95 CG1 CG2 CD1 REMARK 470 GLU D 96 CG CD OE1 OE2 REMARK 470 THR D 97 OG1 CG2 REMARK 470 GLN D 98 CG CD OE1 NE2 REMARK 470 ARG D 101 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 104 CG CD CE NZ REMARK 470 GLU D 105 CG CD OE1 OE2 REMARK 470 ARG D 107 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 137 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE A 113 OG1 THR A 117 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 101 34.60 -62.03 REMARK 500 VAL A 102 -59.31 -144.58 REMARK 500 GLU A 120 -57.16 -26.70 REMARK 500 ARG A 137 28.95 -57.86 REMARK 500 GLU B 111 -51.02 -28.11 REMARK 500 ARG C 101 0.83 -51.31 REMARK 500 GLU C 125 -72.15 -34.65 REMARK 500 LEU C 126 -30.40 -37.62 REMARK 500 ARG C 137 25.28 -65.32 REMARK 500 VAL D 102 -52.13 -28.01 REMARK 500 LYS D 104 -70.30 -54.00 REMARK 500 THR D 135 -10.70 -39.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 123 OE1 REMARK 620 2 GLU B 120 OE1 69.3 REMARK 620 3 GLU B 120 OE2 113.6 44.3 REMARK 620 4 GLN B 123 OE1 99.9 77.2 71.3 REMARK 620 5 GLN C 123 OE1 164.7 123.5 79.9 77.0 REMARK 620 6 GLU D 120 OE1 140.9 92.7 56.7 109.8 52.0 REMARK 620 7 GLU D 120 OE2 96.3 69.0 62.9 134.2 96.4 44.7 REMARK 620 8 GLN D 123 OE1 63.0 131.2 168.6 119.6 105.2 118.2 106.0 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2O1K RELATED DB: PDB REMARK 900 NON-STRUCTURAL GLYCOPROTEIN NSP4(SIMILAR PROTEIN) DBREF 2O1J A 95 146 UNP Q9PYC1 Q9PYC1_9REOV 95 146 DBREF 2O1J B 95 146 UNP Q9PYC1 Q9PYC1_9REOV 95 146 DBREF 2O1J C 95 146 UNP Q9PYC1 Q9PYC1_9REOV 95 146 DBREF 2O1J D 95 146 UNP Q9PYC1 Q9PYC1_9REOV 95 146 SEQADV 2O1J ARG A 129 UNP Q9PYC1 CYS 129 SEE REMARK 999 SEQADV 2O1J THR A 135 UNP Q9PYC1 MET 135 SEE REMARK 999 SEQADV 2O1J ARG B 129 UNP Q9PYC1 CYS 129 SEE REMARK 999 SEQADV 2O1J THR B 135 UNP Q9PYC1 MET 135 SEE REMARK 999 SEQADV 2O1J ARG C 129 UNP Q9PYC1 CYS 129 SEE REMARK 999 SEQADV 2O1J THR C 135 UNP Q9PYC1 MET 135 SEE REMARK 999 SEQADV 2O1J ARG D 129 UNP Q9PYC1 CYS 129 SEE REMARK 999 SEQADV 2O1J THR D 135 UNP Q9PYC1 MET 135 SEE REMARK 999 SEQRES 1 A 52 ILE GLU THR GLN MET ASP ARG VAL VAL LYS GLU MET ARG SEQRES 2 A 52 ARG GLN LEU GLU MET ILE ASP LYS LEU THR THR ARG GLU SEQRES 3 A 52 ILE GLU GLN VAL GLU LEU LEU LYS ARG ILE TYR ASP LYS SEQRES 4 A 52 LEU THR VAL ARG THR ALA ASP GLU ILE ASP MET THR LYS SEQRES 1 B 52 ILE GLU THR GLN MET ASP ARG VAL VAL LYS GLU MET ARG SEQRES 2 B 52 ARG GLN LEU GLU MET ILE ASP LYS LEU THR THR ARG GLU SEQRES 3 B 52 ILE GLU GLN VAL GLU LEU LEU LYS ARG ILE TYR ASP LYS SEQRES 4 B 52 LEU THR VAL ARG THR ALA ASP GLU ILE ASP MET THR LYS SEQRES 1 C 52 ILE GLU THR GLN MET ASP ARG VAL VAL LYS GLU MET ARG SEQRES 2 C 52 ARG GLN LEU GLU MET ILE ASP LYS LEU THR THR ARG GLU SEQRES 3 C 52 ILE GLU GLN VAL GLU LEU LEU LYS ARG ILE TYR ASP LYS SEQRES 4 C 52 LEU THR VAL ARG THR ALA ASP GLU ILE ASP MET THR LYS SEQRES 1 D 52 ILE GLU THR GLN MET ASP ARG VAL VAL LYS GLU MET ARG SEQRES 2 D 52 ARG GLN LEU GLU MET ILE ASP LYS LEU THR THR ARG GLU SEQRES 3 D 52 ILE GLU GLN VAL GLU LEU LEU LYS ARG ILE TYR ASP LYS SEQRES 4 D 52 LEU THR VAL ARG THR ALA ASP GLU ILE ASP MET THR LYS HET CA B 501 1 HETNAM CA CALCIUM ION FORMUL 5 CA CA 2+ FORMUL 6 HOH *11(H2 O) HELIX 1 1 GLU A 96 ARG A 101 1 6 HELIX 2 2 VAL A 102 ARG A 137 1 36 HELIX 3 3 ILE B 95 ARG B 137 1 43 HELIX 4 4 VAL C 102 ARG C 137 1 36 HELIX 5 5 ILE D 95 THR D 135 1 41 LINK OE1 GLN A 123 CA CA B 501 1555 1555 2.74 LINK OE1 GLU B 120 CA CA B 501 1555 1555 2.28 LINK OE2 GLU B 120 CA CA B 501 1555 1555 3.20 LINK OE1 GLN B 123 CA CA B 501 1555 1555 2.36 LINK CA CA B 501 OE1 GLN C 123 1555 1555 2.79 LINK CA CA B 501 OE1 GLU D 120 1555 1555 3.21 LINK CA CA B 501 OE2 GLU D 120 1555 1555 2.51 LINK CA CA B 501 OE1 GLN D 123 1555 1555 2.51 SITE 1 AC1 6 GLN A 123 GLU B 120 GLN B 123 GLN C 123 SITE 2 AC1 6 GLU D 120 GLN D 123 CRYST1 48.614 180.432 48.691 90.00 90.00 90.00 C 2 2 21 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020570 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005542 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020538 0.00000