HEADER VIRAL PROTEIN 29-NOV-06 2O1K TITLE STRUCTURE OF THE EXTENDED DIARRHEA-INDUCING DOMAIN OF ROTAVIRUS TITLE 2 ENTEROTOXIGENIC PROTEIN NSP4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-STRUCTURAL GLYCOPROTEIN NSP4; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: DIARRHEA-INDUCING DOMAIN (RESIDUES 95-146); COMPND 5 SYNONYM: NS28; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SIMIAN ROTAVIRUS A/SA11; SOURCE 3 ORGANISM_TAXID: 10923; SOURCE 4 STRAIN: SA11; SOURCE 5 GENE: G10; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22(B)+ KEYWDS ROTAVIRUS ENTEROTOXIN, NONSTRUCTURAL PROTEIN, NSP4, TETRAMERIC KEYWDS 2 COILED-COIL, VIRULENCE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.DEEPA,K.SUGUNA,C.DURGA RAO REVDAT 5 25-OCT-23 2O1K 1 REMARK LINK REVDAT 4 18-OCT-17 2O1K 1 REMARK REVDAT 3 13-JUL-11 2O1K 1 VERSN REVDAT 2 24-FEB-09 2O1K 1 VERSN REVDAT 1 26-DEC-06 2O1K 0 JRNL AUTH R.DEEPA,C.DURGA RAO,K.SUGUNA JRNL TITL STRUCTURE OF THE EXTENDED DIARRHEA-INDUCING DOMAIN OF JRNL TITL 2 ROTAVIRUS ENTEROTOXIGENIC PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0009 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 12178 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 623 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.67 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.71 REMARK 3 REFLECTION IN BIN (WORKING SET) : 812 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.99 REMARK 3 BIN R VALUE (WORKING SET) : 0.1810 REMARK 3 BIN FREE R VALUE SET COUNT : 46 REMARK 3 BIN FREE R VALUE : 0.2200 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 700 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 61 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : 0.22000 REMARK 3 B33 (A**2) : -0.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.095 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.101 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.044 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.540 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 734 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 759 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 985 ; 1.117 ; 1.998 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1756 ; 0.765 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 92 ; 3.403 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 36 ;30.028 ;23.889 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 171 ;14.499 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;11.405 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 123 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 776 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 138 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 196 ; 0.199 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 760 ; 0.148 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 359 ; 0.168 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 473 ; 0.081 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 24 ; 0.137 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 24 ; 0.159 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 72 ; 0.232 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.208 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 468 ; 0.987 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 180 ; 0.239 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 722 ; 1.446 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 300 ; 2.278 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 259 ; 3.459 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 95 A 137 REMARK 3 ORIGIN FOR THE GROUP (A): 14.7668 13.1891 125.5035 REMARK 3 T TENSOR REMARK 3 T11: -0.0323 T22: -0.0245 REMARK 3 T33: -0.0268 T12: 0.0045 REMARK 3 T13: 0.0177 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 2.2375 L22: 1.6383 REMARK 3 L33: 11.9687 L12: 0.3563 REMARK 3 L13: -2.6829 L23: 0.9163 REMARK 3 S TENSOR REMARK 3 S11: -0.0332 S12: 0.2073 S13: -0.0943 REMARK 3 S21: -0.2396 S22: 0.0309 S23: -0.0790 REMARK 3 S31: -0.0100 S32: 0.1498 S33: 0.0023 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 95 B 137 REMARK 3 ORIGIN FOR THE GROUP (A): 21.5581 17.9673 126.2008 REMARK 3 T TENSOR REMARK 3 T11: -0.0451 T22: -0.0261 REMARK 3 T33: -0.0182 T12: -0.0004 REMARK 3 T13: 0.0321 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 1.8962 L22: 2.5731 REMARK 3 L33: 12.5148 L12: 0.5906 REMARK 3 L13: -0.5832 L23: -3.7031 REMARK 3 S TENSOR REMARK 3 S11: -0.1019 S12: 0.3390 S13: 0.0371 REMARK 3 S21: -0.2138 S22: 0.0282 S23: -0.1932 REMARK 3 S31: 0.2377 S32: 0.0782 S33: 0.0737 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2O1K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1000040570. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : CU K ALPHA REMARK 200 OPTICS : OSMIC MIRROR SYSTEM REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12801 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.670 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.14200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 12.50 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB CODE 1G1J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5M LITHIUM SULPHATE MONOHYDRATE, 0.1 REMARK 280 HEPES, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 15.34600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 19.04500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 91.17700 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 15.34600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 19.04500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 91.17700 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 15.34600 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 19.04500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 91.17700 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 15.34600 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 19.04500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 91.17700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -110.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 30.69200 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 38.09000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CA CA B 501 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 138 REMARK 465 THR A 139 REMARK 465 GLY A 140 REMARK 465 GLU A 141 REMARK 465 ILE A 142 REMARK 465 ASP A 143 REMARK 465 MET A 144 REMARK 465 THR A 145 REMARK 465 LYS A 146 REMARK 465 THR B 138 REMARK 465 THR B 139 REMARK 465 GLY B 140 REMARK 465 GLU B 141 REMARK 465 ILE B 142 REMARK 465 ASP B 143 REMARK 465 MET B 144 REMARK 465 THR B 145 REMARK 465 LYS B 146 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 97 CG CD CE NZ REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 ARG A 107 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 131 OH REMARK 470 GLN A 137 CG CD OE1 NE2 REMARK 470 GLU B 96 CG CD OE1 OE2 REMARK 470 LYS B 97 CG CD CE NZ REMARK 470 GLN B 98 CG CD OE1 NE2 REMARK 470 ARG B 101 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 104 CG CD CE NZ REMARK 470 TYR B 131 OH REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 123 OE1 REMARK 620 2 GLN A 123 OE1 167.5 REMARK 620 3 GLU B 120 OE1 60.8 108.2 REMARK 620 4 GLU B 120 OE2 100.7 68.5 39.9 REMARK 620 5 GLU B 120 OE2 68.9 101.2 62.1 74.6 REMARK 620 6 GLU B 120 OE1 108.9 61.0 78.4 62.1 40.2 REMARK 620 7 GLN B 123 OE1 108.9 78.5 103.2 91.4 164.8 137.0 REMARK 620 8 GLN B 123 OE1 79.1 109.7 137.7 166.0 92.5 104.5 102.0 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2O1J RELATED DB: PDB REMARK 900 NONSTRUCTURAL PROTEIN NSP4(SIMILAR PROTEIN) DBREF 2O1K A 95 146 UNP O92323 O92323_9REOV 95 146 DBREF 2O1K B 95 146 UNP O92323 O92323_9REOV 95 146 SEQRES 1 A 52 ILE GLU LYS GLN MET ASP ARG VAL VAL LYS GLU MET ARG SEQRES 2 A 52 ARG GLN LEU GLU MET ILE ASP LYS LEU THR THR ARG GLU SEQRES 3 A 52 ILE GLU GLN VAL GLU LEU LEU LYS ARG ILE TYR ASP LYS SEQRES 4 A 52 LEU THR VAL GLN THR THR GLY GLU ILE ASP MET THR LYS SEQRES 1 B 52 ILE GLU LYS GLN MET ASP ARG VAL VAL LYS GLU MET ARG SEQRES 2 B 52 ARG GLN LEU GLU MET ILE ASP LYS LEU THR THR ARG GLU SEQRES 3 B 52 ILE GLU GLN VAL GLU LEU LEU LYS ARG ILE TYR ASP LYS SEQRES 4 B 52 LEU THR VAL GLN THR THR GLY GLU ILE ASP MET THR LYS HET CA B 501 1 HETNAM CA CALCIUM ION FORMUL 3 CA CA 2+ FORMUL 4 HOH *61(H2 O) HELIX 1 1 ILE A 95 GLN A 137 1 43 HELIX 2 2 ILE B 95 GLN B 137 1 43 LINK OE1 GLN A 123 CA CA B 501 1555 1555 2.97 LINK OE1 GLN A 123 CA CA B 501 2665 1555 2.98 LINK OE1 GLU B 120 CA CA B 501 1555 1555 3.15 LINK OE2 GLU B 120 CA CA B 501 1555 1555 3.25 LINK OE2 GLU B 120 CA CA B 501 2665 1555 3.22 LINK OE1 GLU B 120 CA CA B 501 2665 1555 3.13 LINK OE1 GLN B 123 CA CA B 501 1555 1555 2.83 LINK OE1 GLN B 123 CA CA B 501 2665 1555 2.79 SITE 1 AC1 3 GLN A 123 GLU B 120 GLN B 123 CRYST1 30.692 38.090 182.354 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.032582 0.000000 0.000000 0.00000 SCALE2 0.000000 0.026254 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005484 0.00000