HEADER TRANSCRIPTION 01-DEC-06 2O3F TITLE STRUCTURAL GENOMICS, THE CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF TITLE 2 THE PUTATIVE TRANSCRIPTIONAL REGULATOR YBBH FROM BACILLUS SUBTILIS TITLE 3 SUBSP. SUBTILIS STR. 168. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE HTH-TYPE TRANSCRIPTIONAL REGULATOR YBBH; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: RESIDUES 1-108; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 STRAIN: 168; SOURCE 5 VARIANT: BACILLUS SUBTILIS SUBSP. SUBTILIS; SOURCE 6 GENE: YBBH; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG19 KEYWDS APC85504, PUTATIVE TRANSCRIPTIONAL REGULATOR YBBH, BACILLUS SUBTILIS KEYWDS 2 SUBSP. SUBTILIS STR. 168, STRUCTURAL GENOMICS, PSI-2, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 4 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,L.BIGELOW,J.ABDULLAH,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 3 27-DEC-23 2O3F 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 2O3F 1 VERSN REVDAT 1 02-JAN-07 2O3F 0 JRNL AUTH K.TAN,L.BIGELOW,J.ABDULLAH,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF THE JRNL TITL 2 PUTATIVE TRANSCRIPTIONAL REGULATOR YBBH FROM BACILLUS JRNL TITL 3 SUBTILIS SUBSP. SUBTILIS STR. 168. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 26813 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1400 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1604 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 79.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.3060 REMARK 3 BIN FREE R VALUE SET COUNT : 78 REMARK 3 BIN FREE R VALUE : 0.3380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1882 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 75 REMARK 3 SOLVENT ATOMS : 137 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.111 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.109 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.079 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.481 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2017 ; 0.018 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2732 ; 1.725 ; 2.068 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 257 ; 5.202 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 69 ;19.794 ;23.913 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 312 ;15.373 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;16.373 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 302 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1448 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1036 ; 0.212 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1361 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 132 ; 0.179 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 77 ; 0.223 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.135 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1280 ; 1.309 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1996 ; 2.145 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 788 ; 2.796 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 730 ; 4.450 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2O3F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1000040637. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-OCT-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97904 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-3 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28223 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 25.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 40.3500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 0.47800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.420 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE, 2M AMMONIUM REMARK 280 SULFATE, PH 4.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 3 CHAIN(S). AUTHORS STATE THAT THE REMARK 300 BIOLOGICAL UNIT OF THIS PROTEIN IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 TYR A 84 REMARK 465 ARG A 85 REMARK 465 ASP A 86 REMARK 465 ILE A 87 REMARK 465 VAL A 88 REMARK 465 PRO A 89 REMARK 465 HIS A 90 REMARK 465 GLU A 91 REMARK 465 PRO A 92 REMARK 465 LEU A 93 REMARK 465 PRO A 94 REMARK 465 SER A 95 REMARK 465 ILE A 96 REMARK 465 SER A 97 REMARK 465 GLU A 98 REMARK 465 LYS A 99 REMARK 465 THR A 100 REMARK 465 ALA A 101 REMARK 465 GLY A 102 REMARK 465 ASN A 103 REMARK 465 ALA A 104 REMARK 465 ILE A 105 REMARK 465 GLN A 106 REMARK 465 ALA A 107 REMARK 465 ILE A 108 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 TYR B 84 REMARK 465 ARG B 85 REMARK 465 ASP B 86 REMARK 465 ILE B 87 REMARK 465 VAL B 88 REMARK 465 PRO B 89 REMARK 465 HIS B 90 REMARK 465 GLU B 91 REMARK 465 PRO B 92 REMARK 465 LEU B 93 REMARK 465 PRO B 94 REMARK 465 SER B 95 REMARK 465 ILE B 96 REMARK 465 SER B 97 REMARK 465 GLU B 98 REMARK 465 LYS B 99 REMARK 465 THR B 100 REMARK 465 ALA B 101 REMARK 465 GLY B 102 REMARK 465 ASN B 103 REMARK 465 ALA B 104 REMARK 465 ILE B 105 REMARK 465 GLN B 106 REMARK 465 ALA B 107 REMARK 465 ILE B 108 REMARK 465 SER C -2 REMARK 465 ASN C -1 REMARK 465 ALA C 0 REMARK 465 TYR C 84 REMARK 465 ARG C 85 REMARK 465 ASP C 86 REMARK 465 ILE C 87 REMARK 465 VAL C 88 REMARK 465 PRO C 89 REMARK 465 HIS C 90 REMARK 465 GLU C 91 REMARK 465 PRO C 92 REMARK 465 LEU C 93 REMARK 465 PRO C 94 REMARK 465 SER C 95 REMARK 465 ILE C 96 REMARK 465 SER C 97 REMARK 465 GLU C 98 REMARK 465 LYS C 99 REMARK 465 THR C 100 REMARK 465 ALA C 101 REMARK 465 GLY C 102 REMARK 465 ASN C 103 REMARK 465 ALA C 104 REMARK 465 ILE C 105 REMARK 465 GLN C 106 REMARK 465 ALA C 107 REMARK 465 ILE C 108 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 2 18.61 -142.50 REMARK 500 SER A 48 -156.37 -132.76 REMARK 500 SER B 48 -155.15 -134.86 REMARK 500 SER C 48 -153.49 -127.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 215 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC85504 RELATED DB: TARGETDB DBREF 2O3F A 1 108 UNP Q45581 YBBH_BACSU 1 108 DBREF 2O3F B 1 108 UNP Q45581 YBBH_BACSU 1 108 DBREF 2O3F C 1 108 UNP Q45581 YBBH_BACSU 1 108 SEQADV 2O3F SER A -2 UNP Q45581 CLONING ARTIFACT SEQADV 2O3F ASN A -1 UNP Q45581 CLONING ARTIFACT SEQADV 2O3F ALA A 0 UNP Q45581 CLONING ARTIFACT SEQADV 2O3F MSE A 1 UNP Q45581 MET 1 MODIFIED RESIDUE SEQADV 2O3F MSE A 12 UNP Q45581 MET 12 MODIFIED RESIDUE SEQADV 2O3F MLY A 13 UNP Q45581 LYS 13 MODIFIED RESIDUE SEQADV 2O3F MLY A 15 UNP Q45581 LYS 15 MODIFIED RESIDUE SEQADV 2O3F MLY A 33 UNP Q45581 LYS 33 MODIFIED RESIDUE SEQADV 2O3F MLY A 58 UNP Q45581 LYS 58 MODIFIED RESIDUE SEQADV 2O3F MLY A 69 UNP Q45581 LYS 69 MODIFIED RESIDUE SEQADV 2O3F MSE A 70 UNP Q45581 MET 70 MODIFIED RESIDUE SEQADV 2O3F SER B -2 UNP Q45581 CLONING ARTIFACT SEQADV 2O3F ASN B -1 UNP Q45581 CLONING ARTIFACT SEQADV 2O3F ALA B 0 UNP Q45581 CLONING ARTIFACT SEQADV 2O3F MSE B 1 UNP Q45581 MET 1 MODIFIED RESIDUE SEQADV 2O3F MSE B 12 UNP Q45581 MET 12 MODIFIED RESIDUE SEQADV 2O3F MLY B 13 UNP Q45581 LYS 13 MODIFIED RESIDUE SEQADV 2O3F MLY B 15 UNP Q45581 LYS 15 MODIFIED RESIDUE SEQADV 2O3F MLY B 33 UNP Q45581 LYS 33 MODIFIED RESIDUE SEQADV 2O3F MLY B 58 UNP Q45581 LYS 58 MODIFIED RESIDUE SEQADV 2O3F MLY B 69 UNP Q45581 LYS 69 MODIFIED RESIDUE SEQADV 2O3F MSE B 70 UNP Q45581 MET 70 MODIFIED RESIDUE SEQADV 2O3F SER C -2 UNP Q45581 CLONING ARTIFACT SEQADV 2O3F ASN C -1 UNP Q45581 CLONING ARTIFACT SEQADV 2O3F ALA C 0 UNP Q45581 CLONING ARTIFACT SEQADV 2O3F MSE C 1 UNP Q45581 MET 1 MODIFIED RESIDUE SEQADV 2O3F MSE C 12 UNP Q45581 MET 12 MODIFIED RESIDUE SEQADV 2O3F MLY C 13 UNP Q45581 LYS 13 MODIFIED RESIDUE SEQADV 2O3F MLY C 15 UNP Q45581 LYS 15 MODIFIED RESIDUE SEQADV 2O3F MLY C 33 UNP Q45581 LYS 33 MODIFIED RESIDUE SEQADV 2O3F MLY C 58 UNP Q45581 LYS 58 MODIFIED RESIDUE SEQADV 2O3F MLY C 69 UNP Q45581 LYS 69 MODIFIED RESIDUE SEQADV 2O3F MSE C 70 UNP Q45581 MET 70 MODIFIED RESIDUE SEQRES 1 A 111 SER ASN ALA MSE ALA THR GLY GLY LEU ALA ILE ILE GLN SEQRES 2 A 111 SER MSE MLY HIS MLY LEU PRO PRO SER GLU ARG LYS LEU SEQRES 3 A 111 ALA ASP TYR ILE LEU ALA HIS PRO HIS MLY ALA ILE GLU SEQRES 4 A 111 SER THR VAL ASN GLU ILE SER ALA LEU ALA ASN SER SER SEQRES 5 A 111 ASP ALA ALA VAL ILE ARG LEU CYS MLY SER LEU GLY LEU SEQRES 6 A 111 LYS GLY PHE GLN ASP LEU MLY MSE ARG VAL ALA GLY ASP SEQRES 7 A 111 LEU ALA LYS PRO THR PHE GLN GLY TYR ARG ASP ILE VAL SEQRES 8 A 111 PRO HIS GLU PRO LEU PRO SER ILE SER GLU LYS THR ALA SEQRES 9 A 111 GLY ASN ALA ILE GLN ALA ILE SEQRES 1 B 111 SER ASN ALA MSE ALA THR GLY GLY LEU ALA ILE ILE GLN SEQRES 2 B 111 SER MSE MLY HIS MLY LEU PRO PRO SER GLU ARG LYS LEU SEQRES 3 B 111 ALA ASP TYR ILE LEU ALA HIS PRO HIS MLY ALA ILE GLU SEQRES 4 B 111 SER THR VAL ASN GLU ILE SER ALA LEU ALA ASN SER SER SEQRES 5 B 111 ASP ALA ALA VAL ILE ARG LEU CYS MLY SER LEU GLY LEU SEQRES 6 B 111 LYS GLY PHE GLN ASP LEU MLY MSE ARG VAL ALA GLY ASP SEQRES 7 B 111 LEU ALA LYS PRO THR PHE GLN GLY TYR ARG ASP ILE VAL SEQRES 8 B 111 PRO HIS GLU PRO LEU PRO SER ILE SER GLU LYS THR ALA SEQRES 9 B 111 GLY ASN ALA ILE GLN ALA ILE SEQRES 1 C 111 SER ASN ALA MSE ALA THR GLY GLY LEU ALA ILE ILE GLN SEQRES 2 C 111 SER MSE MLY HIS MLY LEU PRO PRO SER GLU ARG LYS LEU SEQRES 3 C 111 ALA ASP TYR ILE LEU ALA HIS PRO HIS MLY ALA ILE GLU SEQRES 4 C 111 SER THR VAL ASN GLU ILE SER ALA LEU ALA ASN SER SER SEQRES 5 C 111 ASP ALA ALA VAL ILE ARG LEU CYS MLY SER LEU GLY LEU SEQRES 6 C 111 LYS GLY PHE GLN ASP LEU MLY MSE ARG VAL ALA GLY ASP SEQRES 7 C 111 LEU ALA LYS PRO THR PHE GLN GLY TYR ARG ASP ILE VAL SEQRES 8 C 111 PRO HIS GLU PRO LEU PRO SER ILE SER GLU LYS THR ALA SEQRES 9 C 111 GLY ASN ALA ILE GLN ALA ILE MODRES 2O3F MSE A 1 MET SELENOMETHIONINE MODRES 2O3F MSE A 12 MET SELENOMETHIONINE MODRES 2O3F MLY A 13 LYS N-DIMETHYL-LYSINE MODRES 2O3F MLY A 15 LYS N-DIMETHYL-LYSINE MODRES 2O3F MLY A 33 LYS N-DIMETHYL-LYSINE MODRES 2O3F MLY A 58 LYS N-DIMETHYL-LYSINE MODRES 2O3F MLY A 69 LYS N-DIMETHYL-LYSINE MODRES 2O3F MSE A 70 MET SELENOMETHIONINE MODRES 2O3F MSE B 12 MET SELENOMETHIONINE MODRES 2O3F MLY B 13 LYS N-DIMETHYL-LYSINE MODRES 2O3F MLY B 15 LYS N-DIMETHYL-LYSINE MODRES 2O3F MLY B 33 LYS N-DIMETHYL-LYSINE MODRES 2O3F MLY B 58 LYS N-DIMETHYL-LYSINE MODRES 2O3F MLY B 69 LYS N-DIMETHYL-LYSINE MODRES 2O3F MSE B 70 MET SELENOMETHIONINE MODRES 2O3F MSE C 1 MET SELENOMETHIONINE MODRES 2O3F MSE C 12 MET SELENOMETHIONINE MODRES 2O3F MLY C 13 LYS N-DIMETHYL-LYSINE MODRES 2O3F MLY C 15 LYS N-DIMETHYL-LYSINE MODRES 2O3F MLY C 33 LYS N-DIMETHYL-LYSINE MODRES 2O3F MLY C 58 LYS N-DIMETHYL-LYSINE MODRES 2O3F MLY C 69 LYS N-DIMETHYL-LYSINE MODRES 2O3F MSE C 70 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 12 8 HET MLY A 13 11 HET MLY A 15 11 HET MLY A 33 11 HET MLY A 58 11 HET MLY A 69 11 HET MSE A 70 8 HET MSE B 12 8 HET MLY B 13 11 HET MLY B 15 11 HET MLY B 33 11 HET MLY B 58 11 HET MLY B 69 11 HET MSE B 70 8 HET MSE C 1 8 HET MSE C 12 8 HET MLY C 13 11 HET MLY C 15 11 HET MLY C 33 11 HET MLY C 58 11 HET MLY C 69 11 HET MSE C 70 8 HET SO4 A 203 5 HET SO4 A 206 5 HET SO4 A 209 5 HET SO4 A 210 5 HET SO4 A 214 5 HET SO4 B 202 5 HET SO4 B 204 5 HET SO4 B 207 5 HET SO4 B 211 5 HET SO4 B 215 5 HET SO4 C 201 5 HET SO4 C 205 5 HET SO4 C 208 5 HET SO4 C 212 5 HET SO4 C 213 5 HETNAM MSE SELENOMETHIONINE HETNAM MLY N-DIMETHYL-LYSINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 1 MLY 15(C8 H18 N2 O2) FORMUL 4 SO4 15(O4 S 2-) FORMUL 19 HOH *137(H2 O) HELIX 1 1 GLY A 4 MLY A 13 1 10 HELIX 2 2 HIS A 14 LEU A 16 5 3 HELIX 3 3 PRO A 17 HIS A 30 1 14 HELIX 4 4 HIS A 30 GLU A 36 1 7 HELIX 5 5 THR A 38 ALA A 46 1 9 HELIX 6 6 SER A 49 LEU A 60 1 12 HELIX 7 7 GLY A 64 LYS A 78 1 15 HELIX 8 8 PRO A 79 GLN A 82 5 4 HELIX 9 9 GLY B 4 MLY B 13 1 10 HELIX 10 10 PRO B 17 HIS B 30 1 14 HELIX 11 11 HIS B 30 ILE B 35 1 6 HELIX 12 12 THR B 38 ALA B 46 1 9 HELIX 13 13 SER B 49 LEU B 60 1 12 HELIX 14 14 GLY B 64 LYS B 78 1 15 HELIX 15 15 PRO B 79 GLN B 82 5 4 HELIX 16 16 GLY C 4 MLY C 13 1 10 HELIX 17 17 HIS C 14 LEU C 16 5 3 HELIX 18 18 PRO C 17 HIS C 30 1 14 HELIX 19 19 HIS C 30 ILE C 35 1 6 HELIX 20 20 THR C 38 ASN C 47 1 10 HELIX 21 21 SER C 49 LEU C 60 1 12 HELIX 22 22 GLY C 64 LYS C 78 1 15 HELIX 23 23 PRO C 79 GLN C 82 5 4 LINK C MSE A 1 N ALA A 2 1555 1555 1.33 LINK C SER A 11 N MSE A 12 1555 1555 1.32 LINK C MSE A 12 N MLY A 13 1555 1555 1.33 LINK C MLY A 13 N HIS A 14 1555 1555 1.34 LINK C HIS A 14 N MLY A 15 1555 1555 1.33 LINK C MLY A 15 N LEU A 16 1555 1555 1.33 LINK C HIS A 32 N MLY A 33 1555 1555 1.34 LINK C MLY A 33 N ALA A 34 1555 1555 1.32 LINK C CYS A 57 N MLY A 58 1555 1555 1.33 LINK C MLY A 58 N SER A 59 1555 1555 1.34 LINK C LEU A 68 N MLY A 69 1555 1555 1.33 LINK C MLY A 69 N MSE A 70 1555 1555 1.35 LINK C MSE A 70 N ARG A 71 1555 1555 1.35 LINK C SER B 11 N MSE B 12 1555 1555 1.32 LINK C MSE B 12 N MLY B 13 1555 1555 1.34 LINK C MLY B 13 N HIS B 14 1555 1555 1.34 LINK C HIS B 14 N MLY B 15 1555 1555 1.34 LINK C MLY B 15 N LEU B 16 1555 1555 1.33 LINK C HIS B 32 N MLY B 33 1555 1555 1.34 LINK C MLY B 33 N ALA B 34 1555 1555 1.33 LINK C CYS B 57 N MLY B 58 1555 1555 1.32 LINK C MLY B 58 N SER B 59 1555 1555 1.34 LINK C LEU B 68 N MLY B 69 1555 1555 1.33 LINK C MLY B 69 N MSE B 70 1555 1555 1.35 LINK C MSE B 70 N ARG B 71 1555 1555 1.34 LINK C MSE C 1 N ALA C 2 1555 1555 1.34 LINK C SER C 11 N MSE C 12 1555 1555 1.33 LINK C MSE C 12 N MLY C 13 1555 1555 1.34 LINK C MLY C 13 N HIS C 14 1555 1555 1.34 LINK C HIS C 14 N MLY C 15 1555 1555 1.33 LINK C MLY C 15 N LEU C 16 1555 1555 1.33 LINK C HIS C 32 N MLY C 33 1555 1555 1.33 LINK C MLY C 33 N ALA C 34 1555 1555 1.32 LINK C CYS C 57 N MLY C 58 1555 1555 1.33 LINK C MLY C 58 N SER C 59 1555 1555 1.34 LINK C LEU C 68 N MLY C 69 1555 1555 1.33 LINK C MLY C 69 N MSE C 70 1555 1555 1.35 LINK C MSE C 70 N ARG C 71 1555 1555 1.34 CISPEP 1 GLN C 82 GLY C 83 0 4.23 SITE 1 AC1 5 ALA C 29 HIS C 30 PRO C 31 HIS C 32 SITE 2 AC1 5 MLY C 33 SITE 1 AC2 7 HIS B 30 PRO B 31 HIS B 32 MLY B 33 SITE 2 AC2 7 HOH B 228 HOH B 247 MLY C 15 SITE 1 AC3 6 ALA A 29 HIS A 30 PRO A 31 HIS A 32 SITE 2 AC3 6 MLY A 33 MLY B 15 SITE 1 AC4 4 SER B 49 ARG B 55 HOH B 244 HOH B 249 SITE 1 AC5 7 SER C 49 ALA C 51 ALA C 52 ARG C 55 SITE 2 AC5 7 SO4 C 212 HOH C 244 HOH C 256 SITE 1 AC6 5 SER A 49 ALA A 51 ALA A 52 ARG A 55 SITE 2 AC6 5 HOH A 256 SITE 1 AC7 3 GLN B 10 MLY B 13 HIS B 14 SITE 1 AC8 3 GLN C 10 MLY C 13 HIS C 14 SITE 1 AC9 3 GLN A 10 MLY A 13 HIS A 14 SITE 1 BC1 5 PRO A 17 PRO A 18 SER A 19 GLU A 20 SITE 2 BC1 5 ARG A 55 SITE 1 BC2 5 PRO B 17 PRO B 18 SER B 19 GLU B 20 SITE 2 BC2 5 ARG B 55 SITE 1 BC3 6 PRO C 17 PRO C 18 SER C 19 GLU C 20 SITE 2 BC3 6 ARG C 55 SO4 C 205 SITE 1 BC4 6 ILE C 54 GLY C 64 PHE C 65 GLN C 66 SITE 2 BC4 6 HOH C 225 HOH C 240 SITE 1 BC5 5 GLY A 64 PHE A 65 GLN A 66 HOH A 220 SITE 2 BC5 5 HOH A 221 SITE 1 BC6 5 GLY B 64 PHE B 65 GLN B 66 HOH B 238 SITE 2 BC6 5 HOH B 250 CRYST1 58.898 48.060 58.854 90.00 119.92 90.00 P 1 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016979 0.000000 0.009771 0.00000 SCALE2 0.000000 0.020807 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019604 0.00000 HETATM 1 N MSE A 1 24.630 9.956 32.903 1.00 58.33 N HETATM 2 CA MSE A 1 23.723 8.994 32.186 1.00 57.96 C HETATM 3 C MSE A 1 22.571 9.693 31.455 1.00 56.44 C HETATM 4 O MSE A 1 21.916 9.090 30.595 1.00 57.66 O HETATM 5 CB MSE A 1 23.144 7.959 33.162 1.00 58.85 C HETATM 6 CG MSE A 1 22.566 6.704 32.470 1.00 60.81 C HETATM 7 SE MSE A 1 23.940 5.677 31.494 0.20 63.55 SE HETATM 8 CE MSE A 1 22.820 4.234 30.796 1.00 62.28 C