data_2O4D # _entry.id 2O4D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2O4D pdb_00002o4d 10.2210/pdb2o4d/pdb RCSB RCSB040671 ? ? WWPDB D_1000040671 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-01-30 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2023-12-27 6 'Structure model' 1 5 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_struct_special_symmetry 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_ref_seq_dif 8 6 'Structure model' pdbx_entry_details 9 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 5 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.entry_id 2O4D _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-12-04 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'McGrath, T.E.' 1 'Battaile, K.' 2 'Kisselman, G.' 3 'Romanov, V.' 4 'Wu-Brown, J.' 5 'Virag, C.' 6 'Ng, I.' 7 'Kimber, M.' 8 'Edwards, A.M.' 9 'Pai, E.F.' 10 'Chirgadze, N.Y.' 11 # _citation.id primary _citation.title 'Crystal Structure of a hypothetical protein from Pseudomonas aeruginosa' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'McGrath, T.E.' 1 ? primary 'Battaile, K.' 2 ? primary 'Kisselman, G.' 3 ? primary 'Romanov, V.' 4 ? primary 'Wu-Brown, J.' 5 ? primary 'Virag, C.' 6 ? primary 'Ng, I.' 7 ? primary 'Kimber, M.' 8 ? primary 'Edwards, A.M.' 9 ? primary 'Pai, E.F.' 10 ? primary 'Chirgadze, N.Y.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical protein PA0269' 18626.340 1 ? ? ? ? 2 water nat water 18.015 108 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSSHHHHHHSSGLVPRGSHMTTRLEWAKASPDAYAA(MSE)LGLEKALAKAGLERPLIELVYLRTSQINGCAYCV N(MSE)HANDARKAGETEQRLQALCVWQETPYFTPRERAALAWTEQLARLSQGALPHGLLDELREHFDDKEIAELTLAVS AINAWNRFGVG(MSE)G(MSE)QPE ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMTTRLEWAKASPDAYAAMLGLEKALAKAGLERPLIELVYLRTSQINGCAYCVNMHANDAR KAGETEQRLQALCVWQETPYFTPRERAALAWTEQLARLSQGALPHGLLDELREHFDDKEIAELTLAVSAINAWNRFGVGM GMQPE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 THR n 1 23 THR n 1 24 ARG n 1 25 LEU n 1 26 GLU n 1 27 TRP n 1 28 ALA n 1 29 LYS n 1 30 ALA n 1 31 SER n 1 32 PRO n 1 33 ASP n 1 34 ALA n 1 35 TYR n 1 36 ALA n 1 37 ALA n 1 38 MSE n 1 39 LEU n 1 40 GLY n 1 41 LEU n 1 42 GLU n 1 43 LYS n 1 44 ALA n 1 45 LEU n 1 46 ALA n 1 47 LYS n 1 48 ALA n 1 49 GLY n 1 50 LEU n 1 51 GLU n 1 52 ARG n 1 53 PRO n 1 54 LEU n 1 55 ILE n 1 56 GLU n 1 57 LEU n 1 58 VAL n 1 59 TYR n 1 60 LEU n 1 61 ARG n 1 62 THR n 1 63 SER n 1 64 GLN n 1 65 ILE n 1 66 ASN n 1 67 GLY n 1 68 CYS n 1 69 ALA n 1 70 TYR n 1 71 CYS n 1 72 VAL n 1 73 ASN n 1 74 MSE n 1 75 HIS n 1 76 ALA n 1 77 ASN n 1 78 ASP n 1 79 ALA n 1 80 ARG n 1 81 LYS n 1 82 ALA n 1 83 GLY n 1 84 GLU n 1 85 THR n 1 86 GLU n 1 87 GLN n 1 88 ARG n 1 89 LEU n 1 90 GLN n 1 91 ALA n 1 92 LEU n 1 93 CYS n 1 94 VAL n 1 95 TRP n 1 96 GLN n 1 97 GLU n 1 98 THR n 1 99 PRO n 1 100 TYR n 1 101 PHE n 1 102 THR n 1 103 PRO n 1 104 ARG n 1 105 GLU n 1 106 ARG n 1 107 ALA n 1 108 ALA n 1 109 LEU n 1 110 ALA n 1 111 TRP n 1 112 THR n 1 113 GLU n 1 114 GLN n 1 115 LEU n 1 116 ALA n 1 117 ARG n 1 118 LEU n 1 119 SER n 1 120 GLN n 1 121 GLY n 1 122 ALA n 1 123 LEU n 1 124 PRO n 1 125 HIS n 1 126 GLY n 1 127 LEU n 1 128 LEU n 1 129 ASP n 1 130 GLU n 1 131 LEU n 1 132 ARG n 1 133 GLU n 1 134 HIS n 1 135 PHE n 1 136 ASP n 1 137 ASP n 1 138 LYS n 1 139 GLU n 1 140 ILE n 1 141 ALA n 1 142 GLU n 1 143 LEU n 1 144 THR n 1 145 LEU n 1 146 ALA n 1 147 VAL n 1 148 SER n 1 149 ALA n 1 150 ILE n 1 151 ASN n 1 152 ALA n 1 153 TRP n 1 154 ASN n 1 155 ARG n 1 156 PHE n 1 157 GLY n 1 158 VAL n 1 159 GLY n 1 160 MSE n 1 161 GLY n 1 162 MSE n 1 163 GLN n 1 164 PRO n 1 165 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Pseudomonas _entity_src_gen.pdbx_gene_src_gene PA0269 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 633 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas aeruginosa' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -19 ? ? ? A . n A 1 2 GLY 2 -18 ? ? ? A . n A 1 3 SER 3 -17 ? ? ? A . n A 1 4 SER 4 -16 ? ? ? A . n A 1 5 HIS 5 -15 ? ? ? A . n A 1 6 HIS 6 -14 ? ? ? A . n A 1 7 HIS 7 -13 ? ? ? A . n A 1 8 HIS 8 -12 ? ? ? A . n A 1 9 HIS 9 -11 ? ? ? A . n A 1 10 HIS 10 -10 ? ? ? A . n A 1 11 SER 11 -9 ? ? ? A . n A 1 12 SER 12 -8 ? ? ? A . n A 1 13 GLY 13 -7 ? ? ? A . n A 1 14 LEU 14 -6 ? ? ? A . n A 1 15 VAL 15 -5 ? ? ? A . n A 1 16 PRO 16 -4 ? ? ? A . n A 1 17 ARG 17 -3 ? ? ? A . n A 1 18 GLY 18 -2 ? ? ? A . n A 1 19 SER 19 -1 ? ? ? A . n A 1 20 HIS 20 0 ? ? ? A . n A 1 21 MET 21 1 ? ? ? A . n A 1 22 THR 22 2 2 THR THR A . n A 1 23 THR 23 3 3 THR THR A . n A 1 24 ARG 24 4 4 ARG ARG A . n A 1 25 LEU 25 5 5 LEU LEU A . n A 1 26 GLU 26 6 6 GLU GLU A . n A 1 27 TRP 27 7 7 TRP TRP A . n A 1 28 ALA 28 8 8 ALA ALA A . n A 1 29 LYS 29 9 9 LYS LYS A . n A 1 30 ALA 30 10 10 ALA ALA A . n A 1 31 SER 31 11 11 SER SER A . n A 1 32 PRO 32 12 12 PRO PRO A . n A 1 33 ASP 33 13 13 ASP ASP A . n A 1 34 ALA 34 14 14 ALA ALA A . n A 1 35 TYR 35 15 15 TYR TYR A . n A 1 36 ALA 36 16 16 ALA ALA A . n A 1 37 ALA 37 17 17 ALA ALA A . n A 1 38 MSE 38 18 18 MSE MSE A . n A 1 39 LEU 39 19 19 LEU LEU A . n A 1 40 GLY 40 20 20 GLY GLY A . n A 1 41 LEU 41 21 21 LEU LEU A . n A 1 42 GLU 42 22 22 GLU GLU A . n A 1 43 LYS 43 23 23 LYS LYS A . n A 1 44 ALA 44 24 24 ALA ALA A . n A 1 45 LEU 45 25 25 LEU LEU A . n A 1 46 ALA 46 26 26 ALA ALA A . n A 1 47 LYS 47 27 27 LYS LYS A . n A 1 48 ALA 48 28 28 ALA ALA A . n A 1 49 GLY 49 29 29 GLY GLY A . n A 1 50 LEU 50 30 30 LEU LEU A . n A 1 51 GLU 51 31 31 GLU GLU A . n A 1 52 ARG 52 32 32 ARG ARG A . n A 1 53 PRO 53 33 33 PRO PRO A . n A 1 54 LEU 54 34 34 LEU LEU A . n A 1 55 ILE 55 35 35 ILE ILE A . n A 1 56 GLU 56 36 36 GLU GLU A . n A 1 57 LEU 57 37 37 LEU LEU A . n A 1 58 VAL 58 38 38 VAL VAL A . n A 1 59 TYR 59 39 39 TYR TYR A . n A 1 60 LEU 60 40 40 LEU LEU A . n A 1 61 ARG 61 41 41 ARG ARG A . n A 1 62 THR 62 42 42 THR THR A . n A 1 63 SER 63 43 43 SER SER A . n A 1 64 GLN 64 44 44 GLN GLN A . n A 1 65 ILE 65 45 45 ILE ILE A . n A 1 66 ASN 66 46 46 ASN ASN A . n A 1 67 GLY 67 47 47 GLY GLY A . n A 1 68 CYS 68 48 48 CYS CYS A . n A 1 69 ALA 69 49 49 ALA ALA A . n A 1 70 TYR 70 50 50 TYR TYR A . n A 1 71 CYS 71 51 51 CYS CYS A . n A 1 72 VAL 72 52 52 VAL VAL A . n A 1 73 ASN 73 53 53 ASN ASN A . n A 1 74 MSE 74 54 54 MSE MSE A . n A 1 75 HIS 75 55 55 HIS HIS A . n A 1 76 ALA 76 56 56 ALA ALA A . n A 1 77 ASN 77 57 57 ASN ASN A . n A 1 78 ASP 78 58 58 ASP ASP A . n A 1 79 ALA 79 59 59 ALA ALA A . n A 1 80 ARG 80 60 60 ARG ARG A . n A 1 81 LYS 81 61 61 LYS LYS A . n A 1 82 ALA 82 62 62 ALA ALA A . n A 1 83 GLY 83 63 63 GLY GLY A . n A 1 84 GLU 84 64 64 GLU GLU A . n A 1 85 THR 85 65 65 THR THR A . n A 1 86 GLU 86 66 66 GLU GLU A . n A 1 87 GLN 87 67 67 GLN GLN A . n A 1 88 ARG 88 68 68 ARG ARG A . n A 1 89 LEU 89 69 69 LEU LEU A . n A 1 90 GLN 90 70 70 GLN GLN A . n A 1 91 ALA 91 71 71 ALA ALA A . n A 1 92 LEU 92 72 72 LEU LEU A . n A 1 93 CYS 93 73 73 CYS CYS A . n A 1 94 VAL 94 74 74 VAL VAL A . n A 1 95 TRP 95 75 75 TRP TRP A . n A 1 96 GLN 96 76 76 GLN GLN A . n A 1 97 GLU 97 77 77 GLU GLU A . n A 1 98 THR 98 78 78 THR THR A . n A 1 99 PRO 99 79 79 PRO PRO A . n A 1 100 TYR 100 80 80 TYR TYR A . n A 1 101 PHE 101 81 81 PHE PHE A . n A 1 102 THR 102 82 82 THR THR A . n A 1 103 PRO 103 83 83 PRO PRO A . n A 1 104 ARG 104 84 84 ARG ARG A . n A 1 105 GLU 105 85 85 GLU GLU A . n A 1 106 ARG 106 86 86 ARG ARG A . n A 1 107 ALA 107 87 87 ALA ALA A . n A 1 108 ALA 108 88 88 ALA ALA A . n A 1 109 LEU 109 89 89 LEU LEU A . n A 1 110 ALA 110 90 90 ALA ALA A . n A 1 111 TRP 111 91 91 TRP TRP A . n A 1 112 THR 112 92 92 THR THR A . n A 1 113 GLU 113 93 93 GLU GLU A . n A 1 114 GLN 114 94 94 GLN GLN A . n A 1 115 LEU 115 95 95 LEU LEU A . n A 1 116 ALA 116 96 96 ALA ALA A . n A 1 117 ARG 117 97 97 ARG ARG A . n A 1 118 LEU 118 98 98 LEU LEU A . n A 1 119 SER 119 99 99 SER SER A . n A 1 120 GLN 120 100 100 GLN GLN A . n A 1 121 GLY 121 101 101 GLY GLY A . n A 1 122 ALA 122 102 102 ALA ALA A . n A 1 123 LEU 123 103 103 LEU LEU A . n A 1 124 PRO 124 104 104 PRO PRO A . n A 1 125 HIS 125 105 105 HIS HIS A . n A 1 126 GLY 126 106 106 GLY GLY A . n A 1 127 LEU 127 107 107 LEU LEU A . n A 1 128 LEU 128 108 108 LEU LEU A . n A 1 129 ASP 129 109 109 ASP ASP A . n A 1 130 GLU 130 110 110 GLU GLU A . n A 1 131 LEU 131 111 111 LEU LEU A . n A 1 132 ARG 132 112 112 ARG ARG A . n A 1 133 GLU 133 113 113 GLU GLU A . n A 1 134 HIS 134 114 114 HIS HIS A . n A 1 135 PHE 135 115 115 PHE PHE A . n A 1 136 ASP 136 116 116 ASP ASP A . n A 1 137 ASP 137 117 117 ASP ASP A . n A 1 138 LYS 138 118 118 LYS LYS A . n A 1 139 GLU 139 119 119 GLU GLU A . n A 1 140 ILE 140 120 120 ILE ILE A . n A 1 141 ALA 141 121 121 ALA ALA A . n A 1 142 GLU 142 122 122 GLU GLU A . n A 1 143 LEU 143 123 123 LEU LEU A . n A 1 144 THR 144 124 124 THR THR A . n A 1 145 LEU 145 125 125 LEU LEU A . n A 1 146 ALA 146 126 126 ALA ALA A . n A 1 147 VAL 147 127 127 VAL VAL A . n A 1 148 SER 148 128 128 SER SER A . n A 1 149 ALA 149 129 129 ALA ALA A . n A 1 150 ILE 150 130 130 ILE ILE A . n A 1 151 ASN 151 131 131 ASN ASN A . n A 1 152 ALA 152 132 132 ALA ALA A . n A 1 153 TRP 153 133 133 TRP TRP A . n A 1 154 ASN 154 134 134 ASN ASN A . n A 1 155 ARG 155 135 135 ARG ARG A . n A 1 156 PHE 156 136 136 PHE PHE A . n A 1 157 GLY 157 137 137 GLY GLY A . n A 1 158 VAL 158 138 138 VAL VAL A . n A 1 159 GLY 159 139 139 GLY GLY A . n A 1 160 MSE 160 140 140 MSE MSE A . n A 1 161 GLY 161 141 141 GLY GLY A . n A 1 162 MSE 162 142 142 MSE MSE A . n A 1 163 GLN 163 143 143 GLN GLN A . n A 1 164 PRO 164 144 144 PRO PRO A . n A 1 165 GLU 165 145 145 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 146 1 HOH HOH A . B 2 HOH 2 147 2 HOH HOH A . B 2 HOH 3 148 3 HOH HOH A . B 2 HOH 4 149 4 HOH HOH A . B 2 HOH 5 150 5 HOH HOH A . B 2 HOH 6 151 6 HOH HOH A . B 2 HOH 7 152 7 HOH HOH A . B 2 HOH 8 153 8 HOH HOH A . B 2 HOH 9 154 9 HOH HOH A . B 2 HOH 10 155 10 HOH HOH A . B 2 HOH 11 156 11 HOH HOH A . B 2 HOH 12 157 12 HOH HOH A . B 2 HOH 13 158 13 HOH HOH A . B 2 HOH 14 159 14 HOH HOH A . B 2 HOH 15 160 15 HOH HOH A . B 2 HOH 16 161 16 HOH HOH A . B 2 HOH 17 162 17 HOH HOH A . B 2 HOH 18 163 18 HOH HOH A . B 2 HOH 19 164 19 HOH HOH A . B 2 HOH 20 165 20 HOH HOH A . B 2 HOH 21 166 21 HOH HOH A . B 2 HOH 22 167 22 HOH HOH A . B 2 HOH 23 168 23 HOH HOH A . B 2 HOH 24 169 24 HOH HOH A . B 2 HOH 25 170 25 HOH HOH A . B 2 HOH 26 171 26 HOH HOH A . B 2 HOH 27 172 27 HOH HOH A . B 2 HOH 28 173 28 HOH HOH A . B 2 HOH 29 174 29 HOH HOH A . B 2 HOH 30 175 30 HOH HOH A . B 2 HOH 31 176 31 HOH HOH A . B 2 HOH 32 177 32 HOH HOH A . B 2 HOH 33 178 33 HOH HOH A . B 2 HOH 34 179 34 HOH HOH A . B 2 HOH 35 180 35 HOH HOH A . B 2 HOH 36 181 36 HOH HOH A . B 2 HOH 37 182 37 HOH HOH A . B 2 HOH 38 183 38 HOH HOH A . B 2 HOH 39 184 39 HOH HOH A . B 2 HOH 40 185 40 HOH HOH A . B 2 HOH 41 186 41 HOH HOH A . B 2 HOH 42 187 42 HOH HOH A . B 2 HOH 43 188 43 HOH HOH A . B 2 HOH 44 189 44 HOH HOH A . B 2 HOH 45 190 45 HOH HOH A . B 2 HOH 46 191 46 HOH HOH A . B 2 HOH 47 192 47 HOH HOH A . B 2 HOH 48 193 48 HOH HOH A . B 2 HOH 49 194 49 HOH HOH A . B 2 HOH 50 195 50 HOH HOH A . B 2 HOH 51 196 51 HOH HOH A . B 2 HOH 52 197 52 HOH HOH A . B 2 HOH 53 198 53 HOH HOH A . B 2 HOH 54 199 54 HOH HOH A . B 2 HOH 55 200 55 HOH HOH A . B 2 HOH 56 201 56 HOH HOH A . B 2 HOH 57 202 57 HOH HOH A . B 2 HOH 58 203 58 HOH HOH A . B 2 HOH 59 204 59 HOH HOH A . B 2 HOH 60 205 60 HOH HOH A . B 2 HOH 61 206 61 HOH HOH A . B 2 HOH 62 207 62 HOH HOH A . B 2 HOH 63 208 63 HOH HOH A . B 2 HOH 64 209 64 HOH HOH A . B 2 HOH 65 210 65 HOH HOH A . B 2 HOH 66 211 66 HOH HOH A . B 2 HOH 67 212 67 HOH HOH A . B 2 HOH 68 213 68 HOH HOH A . B 2 HOH 69 214 69 HOH HOH A . B 2 HOH 70 215 70 HOH HOH A . B 2 HOH 71 216 71 HOH HOH A . B 2 HOH 72 217 72 HOH HOH A . B 2 HOH 73 218 73 HOH HOH A . B 2 HOH 74 219 74 HOH HOH A . B 2 HOH 75 220 75 HOH HOH A . B 2 HOH 76 221 76 HOH HOH A . B 2 HOH 77 222 77 HOH HOH A . B 2 HOH 78 223 78 HOH HOH A . B 2 HOH 79 224 79 HOH HOH A . B 2 HOH 80 225 80 HOH HOH A . B 2 HOH 81 226 81 HOH HOH A . B 2 HOH 82 227 82 HOH HOH A . B 2 HOH 83 228 83 HOH HOH A . B 2 HOH 84 229 84 HOH HOH A . B 2 HOH 85 230 85 HOH HOH A . B 2 HOH 86 231 86 HOH HOH A . B 2 HOH 87 232 87 HOH HOH A . B 2 HOH 88 233 88 HOH HOH A . B 2 HOH 89 234 89 HOH HOH A . B 2 HOH 90 235 90 HOH HOH A . B 2 HOH 91 236 91 HOH HOH A . B 2 HOH 92 237 92 HOH HOH A . B 2 HOH 93 238 93 HOH HOH A . B 2 HOH 94 239 94 HOH HOH A . B 2 HOH 95 240 95 HOH HOH A . B 2 HOH 96 241 96 HOH HOH A . B 2 HOH 97 242 97 HOH HOH A . B 2 HOH 98 243 98 HOH HOH A . B 2 HOH 99 244 99 HOH HOH A . B 2 HOH 100 245 100 HOH HOH A . B 2 HOH 101 246 101 HOH HOH A . B 2 HOH 102 247 102 HOH HOH A . B 2 HOH 103 248 103 HOH HOH A . B 2 HOH 104 249 104 HOH HOH A . B 2 HOH 105 250 105 HOH HOH A . B 2 HOH 106 251 106 HOH HOH A . B 2 HOH 107 252 107 HOH HOH A . B 2 HOH 108 253 108 HOH HOH A . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 2 JDirector . ? ? ? ? 'data collection' ? ? ? 3 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 4 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 5 SHARP . ? ? ? ? phasing ? ? ? 6 # _cell.length_a 92.718 _cell.length_b 92.718 _cell.length_c 65.303 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 2O4D _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 63 2 2' _symmetry.entry_id 2O4D _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 182 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 2O4D _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.17 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 43.43 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.6 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;0.2M NaCl, 0.1M Tris pH7.6, 0.4M sodium dihydrogen phosphate, 1.6M dipotassium hydrogen phosphate, VAPOR DIFFUSION, SITTING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2006-11-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979337962 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.pdbx_wavelength 0.979337962 _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-ID # _reflns.entry_id 2O4D _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.85 _reflns.d_resolution_low 50 _reflns.number_all 14576 _reflns.number_obs 14543 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 28.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 21.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.85 _reflns_shell.d_res_low 1.92 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.446 _reflns_shell.meanI_over_sigI_obs 9.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 20.2 _reflns_shell.number_unique_all 1421 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2O4D _refine.ls_d_res_high 1.850 _refine.ls_d_res_low 30.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.690 _refine.ls_number_reflns_obs 14543 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.176 _refine.ls_R_factor_R_work 0.175 _refine.ls_R_factor_R_free 0.206 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 727 _refine.B_iso_mean 29.679 _refine.aniso_B[1][1] 0.730 _refine.aniso_B[2][2] 0.730 _refine.aniso_B[3][3] -1.100 _refine.aniso_B[1][2] 0.370 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.958 _refine.correlation_coeff_Fo_to_Fc_free 0.952 _refine.pdbx_overall_ESU_R 0.124 _refine.pdbx_overall_ESU_R_Free 0.117 _refine.overall_SU_ML 0.074 _refine.overall_SU_B 4.868 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 14576 _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1128 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 108 _refine_hist.number_atoms_total 1236 _refine_hist.d_res_high 1.850 _refine_hist.d_res_low 30.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1165 0.011 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1583 1.219 1.957 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 147 4.778 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 57 29.779 24.035 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 198 12.866 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 10 16.346 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 173 0.086 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 897 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 531 0.191 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 807 0.299 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 71 0.123 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 70 0.178 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 13 0.123 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 755 0.778 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1147 1.135 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 488 2.022 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 434 2.998 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.852 _refine_ls_shell.d_res_low 1.900 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.270 _refine_ls_shell.number_reflns_R_work 966 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.215 _refine_ls_shell.R_factor_R_free 0.273 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 58 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 1024 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2O4D _struct.title 'Crystal Structure of a hypothetical protein from Pseudomonas aeruginosa' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2O4D _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.text 'hypothetical protein, UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9I6M1_PSEAE _struct_ref.pdbx_db_accession Q9I6M1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTTRLEWAKASPDAYAAMLGLEKALAKAGLERPLIELVYLRTSQINGCAYCVNMHANDARKAGETEQRLQALCVWQETPY FTPRERAALAWTEQLARLSQGALPHGLLDELREHFDDKEIAELTLAVSAINAWNRFGVGMGMQPE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2O4D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 21 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 165 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9I6M1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 145 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 145 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2O4D MSE A 1 ? UNP Q9I6M1 ? ? 'cloning artifact' -19 1 1 2O4D GLY A 2 ? UNP Q9I6M1 ? ? 'cloning artifact' -18 2 1 2O4D SER A 3 ? UNP Q9I6M1 ? ? 'cloning artifact' -17 3 1 2O4D SER A 4 ? UNP Q9I6M1 ? ? 'cloning artifact' -16 4 1 2O4D HIS A 5 ? UNP Q9I6M1 ? ? 'cloning artifact' -15 5 1 2O4D HIS A 6 ? UNP Q9I6M1 ? ? 'cloning artifact' -14 6 1 2O4D HIS A 7 ? UNP Q9I6M1 ? ? 'cloning artifact' -13 7 1 2O4D HIS A 8 ? UNP Q9I6M1 ? ? 'cloning artifact' -12 8 1 2O4D HIS A 9 ? UNP Q9I6M1 ? ? 'cloning artifact' -11 9 1 2O4D HIS A 10 ? UNP Q9I6M1 ? ? 'cloning artifact' -10 10 1 2O4D SER A 11 ? UNP Q9I6M1 ? ? 'cloning artifact' -9 11 1 2O4D SER A 12 ? UNP Q9I6M1 ? ? 'cloning artifact' -8 12 1 2O4D GLY A 13 ? UNP Q9I6M1 ? ? 'cloning artifact' -7 13 1 2O4D LEU A 14 ? UNP Q9I6M1 ? ? 'cloning artifact' -6 14 1 2O4D VAL A 15 ? UNP Q9I6M1 ? ? 'cloning artifact' -5 15 1 2O4D PRO A 16 ? UNP Q9I6M1 ? ? 'cloning artifact' -4 16 1 2O4D ARG A 17 ? UNP Q9I6M1 ? ? 'cloning artifact' -3 17 1 2O4D GLY A 18 ? UNP Q9I6M1 ? ? 'cloning artifact' -2 18 1 2O4D SER A 19 ? UNP Q9I6M1 ? ? 'cloning artifact' -1 19 1 2O4D HIS A 20 ? UNP Q9I6M1 ? ? 'cloning artifact' 0 20 1 2O4D MSE A 38 ? UNP Q9I6M1 MET 18 'modified residue' 18 21 1 2O4D MSE A 74 ? UNP Q9I6M1 MET 54 'modified residue' 54 22 1 2O4D MSE A 160 ? UNP Q9I6M1 MET 140 'modified residue' 140 23 1 2O4D MSE A 162 ? UNP Q9I6M1 MET 142 'modified residue' 142 24 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 16610 ? 1 MORE -90 ? 1 'SSA (A^2)' 31570 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5000000000 -0.8660254038 0.0000000000 46.3590000000 0.8660254038 -0.5000000000 0.0000000000 80.2961433881 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5000000000 0.8660254038 0.0000000000 -46.3590000000 -0.8660254038 -0.5000000000 0.0000000000 80.2961433881 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/2 0.5000000000 -0.8660254038 0.0000000000 46.3590000000 -0.8660254038 -0.5000000000 0.0000000000 80.2961433881 0.0000000000 0.0000000000 -1.0000000000 32.6515000000 5 'crystal symmetry operation' 11_555 -x+y,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 32.6515000000 6 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/2 0.5000000000 0.8660254038 0.0000000000 -46.3590000000 0.8660254038 -0.5000000000 0.0000000000 80.2961433881 0.0000000000 0.0000000000 -1.0000000000 32.6515000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 26 ? SER A 31 ? GLU A 6 SER A 11 1 ? 6 HELX_P HELX_P2 2 SER A 31 ? ALA A 48 ? SER A 11 ALA A 28 1 ? 18 HELX_P HELX_P3 3 GLU A 51 ? GLY A 67 ? GLU A 31 GLY A 47 1 ? 17 HELX_P HELX_P4 4 CYS A 68 ? ALA A 82 ? CYS A 48 ALA A 62 1 ? 15 HELX_P HELX_P5 5 THR A 85 ? LEU A 92 ? THR A 65 LEU A 72 1 ? 8 HELX_P HELX_P6 6 CYS A 93 ? THR A 98 ? CYS A 73 THR A 78 5 ? 6 HELX_P HELX_P7 7 THR A 102 ? ARG A 117 ? THR A 82 ARG A 97 1 ? 16 HELX_P HELX_P8 8 LEU A 118 ? GLY A 121 ? LEU A 98 GLY A 101 5 ? 4 HELX_P HELX_P9 9 GLY A 126 ? ARG A 132 ? GLY A 106 ARG A 112 1 ? 7 HELX_P HELX_P10 10 ASP A 136 ? MSE A 160 ? ASP A 116 MSE A 140 1 ? 25 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ALA 37 C ? ? ? 1_555 A MSE 38 N ? ? A ALA 17 A MSE 18 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale2 covale both ? A MSE 38 C ? ? ? 1_555 A LEU 39 N ? ? A MSE 18 A LEU 19 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A ASN 73 C ? ? ? 1_555 A MSE 74 N ? ? A ASN 53 A MSE 54 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale4 covale both ? A MSE 74 C ? ? ? 1_555 A HIS 75 N ? ? A MSE 54 A HIS 55 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale5 covale both ? A GLY 159 C ? ? ? 1_555 A MSE 160 N ? ? A GLY 139 A MSE 140 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale6 covale both ? A MSE 160 C ? ? ? 1_555 A GLY 161 N ? ? A MSE 140 A GLY 141 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale7 covale both ? A GLY 161 C ? ? ? 1_555 A MSE 162 N ? ? A GLY 141 A MSE 142 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale8 covale both ? A MSE 162 C ? ? ? 1_555 A GLN 163 N ? ? A MSE 142 A GLN 143 1_555 ? ? ? ? ? ? ? 1.329 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 38 ? . . . . MSE A 18 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 74 ? . . . . MSE A 54 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE A 160 ? . . . . MSE A 140 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE A 162 ? . . . . MSE A 142 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # _pdbx_entry_details.entry_id 2O4D _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 38 A MSE 18 ? MET SELENOMETHIONINE 2 A MSE 74 A MSE 54 ? MET SELENOMETHIONINE 3 A MSE 160 A MSE 140 ? MET SELENOMETHIONINE 4 A MSE 162 A MSE 142 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 148 ? B HOH . 2 1 A HOH 155 ? B HOH . 3 1 A HOH 157 ? B HOH . 4 1 A HOH 163 ? B HOH . 5 1 A HOH 172 ? B HOH . # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 9.7137 _pdbx_refine_tls.origin_y 33.0654 _pdbx_refine_tls.origin_z 12.2671 _pdbx_refine_tls.T[1][1] -0.1647 _pdbx_refine_tls.T[2][2] -0.1510 _pdbx_refine_tls.T[3][3] -0.1578 _pdbx_refine_tls.T[1][2] 0.0338 _pdbx_refine_tls.T[1][3] 0.0202 _pdbx_refine_tls.T[2][3] -0.0046 _pdbx_refine_tls.L[1][1] 3.6820 _pdbx_refine_tls.L[2][2] 1.7786 _pdbx_refine_tls.L[3][3] 2.0990 _pdbx_refine_tls.L[1][2] 0.9143 _pdbx_refine_tls.L[1][3] -1.7887 _pdbx_refine_tls.L[2][3] 0.3630 _pdbx_refine_tls.S[1][1] -0.0526 _pdbx_refine_tls.S[2][2] -0.0411 _pdbx_refine_tls.S[3][3] 0.0937 _pdbx_refine_tls.S[1][2] -0.1050 _pdbx_refine_tls.S[1][3] -0.2264 _pdbx_refine_tls.S[2][3] 0.0121 _pdbx_refine_tls.S[2][1] 0.0650 _pdbx_refine_tls.S[3][1] 0.1831 _pdbx_refine_tls.S[3][2] 0.1118 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 22 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 165 _pdbx_refine_tls_group.selection ALL _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 2 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 145 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -19 ? A MSE 1 2 1 Y 1 A GLY -18 ? A GLY 2 3 1 Y 1 A SER -17 ? A SER 3 4 1 Y 1 A SER -16 ? A SER 4 5 1 Y 1 A HIS -15 ? A HIS 5 6 1 Y 1 A HIS -14 ? A HIS 6 7 1 Y 1 A HIS -13 ? A HIS 7 8 1 Y 1 A HIS -12 ? A HIS 8 9 1 Y 1 A HIS -11 ? A HIS 9 10 1 Y 1 A HIS -10 ? A HIS 10 11 1 Y 1 A SER -9 ? A SER 11 12 1 Y 1 A SER -8 ? A SER 12 13 1 Y 1 A GLY -7 ? A GLY 13 14 1 Y 1 A LEU -6 ? A LEU 14 15 1 Y 1 A VAL -5 ? A VAL 15 16 1 Y 1 A PRO -4 ? A PRO 16 17 1 Y 1 A ARG -3 ? A ARG 17 18 1 Y 1 A GLY -2 ? A GLY 18 19 1 Y 1 A SER -1 ? A SER 19 20 1 Y 1 A HIS 0 ? A HIS 20 21 1 Y 1 A MET 1 ? A MET 21 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 MSE N N N N 250 MSE CA C N S 251 MSE C C N N 252 MSE O O N N 253 MSE OXT O N N 254 MSE CB C N N 255 MSE CG C N N 256 MSE SE SE N N 257 MSE CE C N N 258 MSE H H N N 259 MSE H2 H N N 260 MSE HA H N N 261 MSE HXT H N N 262 MSE HB2 H N N 263 MSE HB3 H N N 264 MSE HG2 H N N 265 MSE HG3 H N N 266 MSE HE1 H N N 267 MSE HE2 H N N 268 MSE HE3 H N N 269 PHE N N N N 270 PHE CA C N S 271 PHE C C N N 272 PHE O O N N 273 PHE CB C N N 274 PHE CG C Y N 275 PHE CD1 C Y N 276 PHE CD2 C Y N 277 PHE CE1 C Y N 278 PHE CE2 C Y N 279 PHE CZ C Y N 280 PHE OXT O N N 281 PHE H H N N 282 PHE H2 H N N 283 PHE HA H N N 284 PHE HB2 H N N 285 PHE HB3 H N N 286 PHE HD1 H N N 287 PHE HD2 H N N 288 PHE HE1 H N N 289 PHE HE2 H N N 290 PHE HZ H N N 291 PHE HXT H N N 292 PRO N N N N 293 PRO CA C N S 294 PRO C C N N 295 PRO O O N N 296 PRO CB C N N 297 PRO CG C N N 298 PRO CD C N N 299 PRO OXT O N N 300 PRO H H N N 301 PRO HA H N N 302 PRO HB2 H N N 303 PRO HB3 H N N 304 PRO HG2 H N N 305 PRO HG3 H N N 306 PRO HD2 H N N 307 PRO HD3 H N N 308 PRO HXT H N N 309 SER N N N N 310 SER CA C N S 311 SER C C N N 312 SER O O N N 313 SER CB C N N 314 SER OG O N N 315 SER OXT O N N 316 SER H H N N 317 SER H2 H N N 318 SER HA H N N 319 SER HB2 H N N 320 SER HB3 H N N 321 SER HG H N N 322 SER HXT H N N 323 THR N N N N 324 THR CA C N S 325 THR C C N N 326 THR O O N N 327 THR CB C N R 328 THR OG1 O N N 329 THR CG2 C N N 330 THR OXT O N N 331 THR H H N N 332 THR H2 H N N 333 THR HA H N N 334 THR HB H N N 335 THR HG1 H N N 336 THR HG21 H N N 337 THR HG22 H N N 338 THR HG23 H N N 339 THR HXT H N N 340 TRP N N N N 341 TRP CA C N S 342 TRP C C N N 343 TRP O O N N 344 TRP CB C N N 345 TRP CG C Y N 346 TRP CD1 C Y N 347 TRP CD2 C Y N 348 TRP NE1 N Y N 349 TRP CE2 C Y N 350 TRP CE3 C Y N 351 TRP CZ2 C Y N 352 TRP CZ3 C Y N 353 TRP CH2 C Y N 354 TRP OXT O N N 355 TRP H H N N 356 TRP H2 H N N 357 TRP HA H N N 358 TRP HB2 H N N 359 TRP HB3 H N N 360 TRP HD1 H N N 361 TRP HE1 H N N 362 TRP HE3 H N N 363 TRP HZ2 H N N 364 TRP HZ3 H N N 365 TRP HH2 H N N 366 TRP HXT H N N 367 TYR N N N N 368 TYR CA C N S 369 TYR C C N N 370 TYR O O N N 371 TYR CB C N N 372 TYR CG C Y N 373 TYR CD1 C Y N 374 TYR CD2 C Y N 375 TYR CE1 C Y N 376 TYR CE2 C Y N 377 TYR CZ C Y N 378 TYR OH O N N 379 TYR OXT O N N 380 TYR H H N N 381 TYR H2 H N N 382 TYR HA H N N 383 TYR HB2 H N N 384 TYR HB3 H N N 385 TYR HD1 H N N 386 TYR HD2 H N N 387 TYR HE1 H N N 388 TYR HE2 H N N 389 TYR HH H N N 390 TYR HXT H N N 391 VAL N N N N 392 VAL CA C N S 393 VAL C C N N 394 VAL O O N N 395 VAL CB C N N 396 VAL CG1 C N N 397 VAL CG2 C N N 398 VAL OXT O N N 399 VAL H H N N 400 VAL H2 H N N 401 VAL HA H N N 402 VAL HB H N N 403 VAL HG11 H N N 404 VAL HG12 H N N 405 VAL HG13 H N N 406 VAL HG21 H N N 407 VAL HG22 H N N 408 VAL HG23 H N N 409 VAL HXT H N N 410 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 MSE N CA sing N N 237 MSE N H sing N N 238 MSE N H2 sing N N 239 MSE CA C sing N N 240 MSE CA CB sing N N 241 MSE CA HA sing N N 242 MSE C O doub N N 243 MSE C OXT sing N N 244 MSE OXT HXT sing N N 245 MSE CB CG sing N N 246 MSE CB HB2 sing N N 247 MSE CB HB3 sing N N 248 MSE CG SE sing N N 249 MSE CG HG2 sing N N 250 MSE CG HG3 sing N N 251 MSE SE CE sing N N 252 MSE CE HE1 sing N N 253 MSE CE HE2 sing N N 254 MSE CE HE3 sing N N 255 PHE N CA sing N N 256 PHE N H sing N N 257 PHE N H2 sing N N 258 PHE CA C sing N N 259 PHE CA CB sing N N 260 PHE CA HA sing N N 261 PHE C O doub N N 262 PHE C OXT sing N N 263 PHE CB CG sing N N 264 PHE CB HB2 sing N N 265 PHE CB HB3 sing N N 266 PHE CG CD1 doub Y N 267 PHE CG CD2 sing Y N 268 PHE CD1 CE1 sing Y N 269 PHE CD1 HD1 sing N N 270 PHE CD2 CE2 doub Y N 271 PHE CD2 HD2 sing N N 272 PHE CE1 CZ doub Y N 273 PHE CE1 HE1 sing N N 274 PHE CE2 CZ sing Y N 275 PHE CE2 HE2 sing N N 276 PHE CZ HZ sing N N 277 PHE OXT HXT sing N N 278 PRO N CA sing N N 279 PRO N CD sing N N 280 PRO N H sing N N 281 PRO CA C sing N N 282 PRO CA CB sing N N 283 PRO CA HA sing N N 284 PRO C O doub N N 285 PRO C OXT sing N N 286 PRO CB CG sing N N 287 PRO CB HB2 sing N N 288 PRO CB HB3 sing N N 289 PRO CG CD sing N N 290 PRO CG HG2 sing N N 291 PRO CG HG3 sing N N 292 PRO CD HD2 sing N N 293 PRO CD HD3 sing N N 294 PRO OXT HXT sing N N 295 SER N CA sing N N 296 SER N H sing N N 297 SER N H2 sing N N 298 SER CA C sing N N 299 SER CA CB sing N N 300 SER CA HA sing N N 301 SER C O doub N N 302 SER C OXT sing N N 303 SER CB OG sing N N 304 SER CB HB2 sing N N 305 SER CB HB3 sing N N 306 SER OG HG sing N N 307 SER OXT HXT sing N N 308 THR N CA sing N N 309 THR N H sing N N 310 THR N H2 sing N N 311 THR CA C sing N N 312 THR CA CB sing N N 313 THR CA HA sing N N 314 THR C O doub N N 315 THR C OXT sing N N 316 THR CB OG1 sing N N 317 THR CB CG2 sing N N 318 THR CB HB sing N N 319 THR OG1 HG1 sing N N 320 THR CG2 HG21 sing N N 321 THR CG2 HG22 sing N N 322 THR CG2 HG23 sing N N 323 THR OXT HXT sing N N 324 TRP N CA sing N N 325 TRP N H sing N N 326 TRP N H2 sing N N 327 TRP CA C sing N N 328 TRP CA CB sing N N 329 TRP CA HA sing N N 330 TRP C O doub N N 331 TRP C OXT sing N N 332 TRP CB CG sing N N 333 TRP CB HB2 sing N N 334 TRP CB HB3 sing N N 335 TRP CG CD1 doub Y N 336 TRP CG CD2 sing Y N 337 TRP CD1 NE1 sing Y N 338 TRP CD1 HD1 sing N N 339 TRP CD2 CE2 doub Y N 340 TRP CD2 CE3 sing Y N 341 TRP NE1 CE2 sing Y N 342 TRP NE1 HE1 sing N N 343 TRP CE2 CZ2 sing Y N 344 TRP CE3 CZ3 doub Y N 345 TRP CE3 HE3 sing N N 346 TRP CZ2 CH2 doub Y N 347 TRP CZ2 HZ2 sing N N 348 TRP CZ3 CH2 sing Y N 349 TRP CZ3 HZ3 sing N N 350 TRP CH2 HH2 sing N N 351 TRP OXT HXT sing N N 352 TYR N CA sing N N 353 TYR N H sing N N 354 TYR N H2 sing N N 355 TYR CA C sing N N 356 TYR CA CB sing N N 357 TYR CA HA sing N N 358 TYR C O doub N N 359 TYR C OXT sing N N 360 TYR CB CG sing N N 361 TYR CB HB2 sing N N 362 TYR CB HB3 sing N N 363 TYR CG CD1 doub Y N 364 TYR CG CD2 sing Y N 365 TYR CD1 CE1 sing Y N 366 TYR CD1 HD1 sing N N 367 TYR CD2 CE2 doub Y N 368 TYR CD2 HD2 sing N N 369 TYR CE1 CZ doub Y N 370 TYR CE1 HE1 sing N N 371 TYR CE2 CZ sing Y N 372 TYR CE2 HE2 sing N N 373 TYR CZ OH sing N N 374 TYR OH HH sing N N 375 TYR OXT HXT sing N N 376 VAL N CA sing N N 377 VAL N H sing N N 378 VAL N H2 sing N N 379 VAL CA C sing N N 380 VAL CA CB sing N N 381 VAL CA HA sing N N 382 VAL C O doub N N 383 VAL C OXT sing N N 384 VAL CB CG1 sing N N 385 VAL CB CG2 sing N N 386 VAL CB HB sing N N 387 VAL CG1 HG11 sing N N 388 VAL CG1 HG12 sing N N 389 VAL CG1 HG13 sing N N 390 VAL CG2 HG21 sing N N 391 VAL CG2 HG22 sing N N 392 VAL CG2 HG23 sing N N 393 VAL OXT HXT sing N N 394 # _atom_sites.entry_id 2O4D _atom_sites.fract_transf_matrix[1][1] 0.010785 _atom_sites.fract_transf_matrix[1][2] 0.006227 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012454 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015313 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_