HEADER UNKNOWN FUNCTION 06-DEC-06 2O62 TITLE CRYSTAL STRUCTURE OF A PROTEIN WITH UNKNOWN FUNCTION FROM DUF3598 TITLE 2 FAMILY (NPUN_R4044) FROM NOSTOC PUNCTIFORME PCC 73102 AT 1.75 A TITLE 3 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOSTOC PUNCTIFORME; SOURCE 3 ORGANISM_TAXID: 63737; SOURCE 4 STRAIN: PCC 73102; SOURCE 5 GENE: ZP_00105914.2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI-2, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 7 27-DEC-23 2O62 1 REMARK LINK REVDAT 6 25-OCT-17 2O62 1 REMARK REVDAT 5 18-OCT-17 2O62 1 REMARK REVDAT 4 13-JUL-11 2O62 1 VERSN REVDAT 3 28-JUL-10 2O62 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 2O62 1 VERSN REVDAT 1 13-FEB-07 2O62 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN (ZP_00105914.2) JRNL TITL 2 FROM NOSTOC PUNCTIFORME PCC 73102 AT 1.75 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.15 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 3 NUMBER OF REFLECTIONS : 56308 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2834 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2888 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 70.34 REMARK 3 BIN R VALUE (WORKING SET) : 0.2460 REMARK 3 BIN FREE R VALUE SET COUNT : 164 REMARK 3 BIN FREE R VALUE : 0.2710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4225 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 92 REMARK 3 SOLVENT ATOMS : 506 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 24.12 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.08000 REMARK 3 B22 (A**2) : -1.18000 REMARK 3 B33 (A**2) : -0.90000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.114 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.114 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.084 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.280 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4440 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4106 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6004 ; 1.641 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9520 ; 0.828 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 556 ; 6.706 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 214 ;34.783 ;23.832 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 756 ;12.507 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 41 ;18.369 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 668 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4927 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 916 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 626 ; 0.222 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4346 ; 0.204 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2072 ; 0.176 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 3076 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 345 ; 0.182 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 14 ; 0.276 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 88 ; 0.247 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 20 ; 0.158 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2783 ; 1.059 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1118 ; 0.267 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4338 ; 1.636 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1873 ; 2.645 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1656 ; 4.174 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 132 REMARK 3 ORIGIN FOR THE GROUP (A): 15.5430 16.6310 31.5590 REMARK 3 T TENSOR REMARK 3 T11: -0.0674 T22: -0.0759 REMARK 3 T33: -0.0947 T12: 0.0069 REMARK 3 T13: 0.0040 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.6585 L22: 1.4993 REMARK 3 L33: 0.5635 L12: 0.4580 REMARK 3 L13: -0.2283 L23: -0.2022 REMARK 3 S TENSOR REMARK 3 S11: 0.0320 S12: -0.0680 S13: -0.0058 REMARK 3 S21: 0.0363 S22: -0.0325 S23: -0.1670 REMARK 3 S31: -0.0363 S32: 0.1386 S33: 0.0005 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 133 A 269 REMARK 3 ORIGIN FOR THE GROUP (A): 0.0240 4.6230 27.6400 REMARK 3 T TENSOR REMARK 3 T11: -0.0786 T22: -0.1149 REMARK 3 T33: -0.0874 T12: 0.0157 REMARK 3 T13: 0.0015 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.6903 L22: 1.4781 REMARK 3 L33: 1.3507 L12: 0.4863 REMARK 3 L13: -0.0389 L23: 0.0790 REMARK 3 S TENSOR REMARK 3 S11: 0.0010 S12: -0.0022 S13: -0.0571 REMARK 3 S21: 0.0228 S22: -0.0084 S23: 0.1605 REMARK 3 S31: 0.0233 S32: -0.0805 S33: 0.0073 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 132 REMARK 3 ORIGIN FOR THE GROUP (A): 16.7840 -4.0360 59.4270 REMARK 3 T TENSOR REMARK 3 T11: -0.1040 T22: -0.0549 REMARK 3 T33: -0.0723 T12: 0.0052 REMARK 3 T13: -0.0077 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.6658 L22: 2.3142 REMARK 3 L33: 1.4353 L12: 0.1889 REMARK 3 L13: -0.0077 L23: -0.3990 REMARK 3 S TENSOR REMARK 3 S11: 0.0163 S12: 0.0237 S13: -0.1117 REMARK 3 S21: -0.0210 S22: -0.0345 S23: 0.1376 REMARK 3 S31: 0.1425 S32: -0.1046 S33: 0.0182 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 133 B 269 REMARK 3 ORIGIN FOR THE GROUP (A): 31.4260 9.4070 62.1610 REMARK 3 T TENSOR REMARK 3 T11: -0.0847 T22: -0.0236 REMARK 3 T33: -0.0645 T12: -0.0043 REMARK 3 T13: 0.0265 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 1.3429 L22: 1.8692 REMARK 3 L33: 1.0104 L12: 0.3530 REMARK 3 L13: 0.5968 L23: 0.5164 REMARK 3 S TENSOR REMARK 3 S11: 0.0115 S12: 0.1079 S13: 0.0886 REMARK 3 S21: -0.1314 S22: -0.0157 S23: -0.1244 REMARK 3 S31: -0.1049 S32: 0.2255 S33: 0.0042 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORD CONTAINS RESIDUAL B FACTORS REMARK 3 ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE REMARK 3 ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED REMARK 3 SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. CHLORINE REMARK 3 AND GLYCEROL MODELED BASED ON CRYSTALLIZATION CONDITIONS. 5. REMARK 3 RESIDUES B182-186 HAVE VERY POOR DENSITY, AND WERE MODELED BASED REMARK 3 ON THE CORRESPONDING RESDIUES IN CHAIN A. REMARK 4 REMARK 4 2O62 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1000040732. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-NOV-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97939 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56361 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 29.148 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 70.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.46200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP, SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NH4CL, 20.0% PEG-3350, NO BUFFER REMARK 280 PH 6.3, VAPOR DIFFUSION, SITTING DROP, NANODROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.60500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.30500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.94000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.30500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.60500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.94000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1,2 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAIN(S). SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 300 SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT REMARK 300 SCATTERING SUPPORTS THE ASSIGNMENT OF A MONOMER AS A REMARK 300 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 GLY B 0 REMARK 465 LEU B 157 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MSE A 1 CB CG SE CE REMARK 470 ARG A 64 CD NE CZ NH1 NH2 REMARK 470 LYS A 255 CE NZ REMARK 470 MSE B 1 CB CG SE CE REMARK 470 LYS B 56 CE NZ REMARK 470 GLU B 185 CB CG CD OE1 OE2 REMARK 470 ARG B 186 CB CG CD NE CZ NH1 NH2 REMARK 470 LYS B 195 CD CE NZ REMARK 470 LYS B 207 CD CE NZ REMARK 470 LYS B 255 CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ASN B 30 CA CB CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 100 -117.85 56.65 REMARK 500 LEU A 157 18.62 59.50 REMARK 500 ALA A 174 -66.26 59.39 REMARK 500 GLU B 100 -119.83 53.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 270 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 271 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 272 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 273 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 274 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 270 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 271 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 275 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 276 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 277 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 272 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 278 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 273 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 274 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 279 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 275 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 276 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 369000 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 (1) THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV REMARK 999 PROTEASE LEAVING ONLY A GLYCINE, FOLLOWED BY THE REMARK 999 TARGET SEQUENCE. REMARK 999 (2) THE SEQUENCE OF THE PROTEIN WAS NOT AVAILABLE AT UNP REMARK 999 DATABASE AT THE TIME OF PROCESSING. REMARK 999 (3) THE SEQUENCE IS AVAILABLE FROM GENBANK UNDER ACCESSION REMARK 999 ID ZP_00105914.2 AND FROM THE UNIPROT ARCHIVE UNDER REMARK 999 ACCESSION ID UPI000045C1C7. DBREF 2O62 A 0 269 PDB 2O62 2O62 0 269 DBREF 2O62 B 0 269 PDB 2O62 2O62 0 269 SEQRES 1 A 270 GLY MSE LYS SER GLN TRP GLU CYS PHE LEU GLN ASN LEU SEQRES 2 A 270 GLY VAL TRP GLU GLY SER PHE SER ASN PHE SER PRO GLU SEQRES 3 A 270 GLY THR LEU LEU ASN ASP THR SER SER ARG LEU CYS LEU SEQRES 4 A 270 GLU GLY LEU ASN ASN ASN GLN THR VAL ARG LEU THR LEU SEQRES 5 A 270 SER ARG SER GLY LYS ASP ASP VAL ILE ARG GLU PHE ARG SEQRES 6 A 270 SER VAL GLY GLY GLY LEU LEU PHE PHE GLU ASN GLY SER SEQRES 7 A 270 PHE SER GLU GLY LEU ILE GLN LEU GLY PRO PHE SER GLU SEQRES 8 A 270 PHE GLY GLY GLU LEU ALA PHE VAL HIS GLU ASN ARG ARG SEQRES 9 A 270 LEU ARG LEU VAL GLN LEU PHE ASP ARG ASN GLY HIS LEU SEQRES 10 A 270 ASN GLY LEU THR LEU ILE ARG GLU HIS LEU ALA GLY THR SEQRES 11 A 270 PRO VAL ALA GLU ARG PRO LEU LEU GLN ILE ASN ASP LEU SEQRES 12 A 270 LEU GLY GLU TRP ARG GLY GLN ALA VAL THR ILE TYR ARG SEQRES 13 A 270 ASP LEU ARG PRO PRO ASP ILE TYR SER THR THR LEU LYS SEQRES 14 A 270 ILE GLN LEU ASP ASP ALA GLY ARG LEU MSE GLN SER THR SEQRES 15 A 270 SER PHE GLY GLU ARG THR ILE THR SER THR ALA THR ILE SEQRES 16 A 270 LYS GLY SER ILE VAL LEU PHE ASP GLN ASP PRO GLU LYS SEQRES 17 A 270 GLN VAL GLN VAL LEU LEU LEU PRO ASP GLY ALA SER ALA SEQRES 18 A 270 THR SER PRO LEU LYS VAL GLN LEU ARG GLN PRO LEU PHE SEQRES 19 A 270 LEU GLU ALA GLY TRP LEU ILE GLN SER ASP LEU ARG GLN SEQRES 20 A 270 ARG MSE ILE ARG SER TYR ASN ASP LYS GLY GLU TRP VAL SEQRES 21 A 270 SER LEU THR LEU VAL THR GLU GLU ARG VAL SEQRES 1 B 270 GLY MSE LYS SER GLN TRP GLU CYS PHE LEU GLN ASN LEU SEQRES 2 B 270 GLY VAL TRP GLU GLY SER PHE SER ASN PHE SER PRO GLU SEQRES 3 B 270 GLY THR LEU LEU ASN ASP THR SER SER ARG LEU CYS LEU SEQRES 4 B 270 GLU GLY LEU ASN ASN ASN GLN THR VAL ARG LEU THR LEU SEQRES 5 B 270 SER ARG SER GLY LYS ASP ASP VAL ILE ARG GLU PHE ARG SEQRES 6 B 270 SER VAL GLY GLY GLY LEU LEU PHE PHE GLU ASN GLY SER SEQRES 7 B 270 PHE SER GLU GLY LEU ILE GLN LEU GLY PRO PHE SER GLU SEQRES 8 B 270 PHE GLY GLY GLU LEU ALA PHE VAL HIS GLU ASN ARG ARG SEQRES 9 B 270 LEU ARG LEU VAL GLN LEU PHE ASP ARG ASN GLY HIS LEU SEQRES 10 B 270 ASN GLY LEU THR LEU ILE ARG GLU HIS LEU ALA GLY THR SEQRES 11 B 270 PRO VAL ALA GLU ARG PRO LEU LEU GLN ILE ASN ASP LEU SEQRES 12 B 270 LEU GLY GLU TRP ARG GLY GLN ALA VAL THR ILE TYR ARG SEQRES 13 B 270 ASP LEU ARG PRO PRO ASP ILE TYR SER THR THR LEU LYS SEQRES 14 B 270 ILE GLN LEU ASP ASP ALA GLY ARG LEU MSE GLN SER THR SEQRES 15 B 270 SER PHE GLY GLU ARG THR ILE THR SER THR ALA THR ILE SEQRES 16 B 270 LYS GLY SER ILE VAL LEU PHE ASP GLN ASP PRO GLU LYS SEQRES 17 B 270 GLN VAL GLN VAL LEU LEU LEU PRO ASP GLY ALA SER ALA SEQRES 18 B 270 THR SER PRO LEU LYS VAL GLN LEU ARG GLN PRO LEU PHE SEQRES 19 B 270 LEU GLU ALA GLY TRP LEU ILE GLN SER ASP LEU ARG GLN SEQRES 20 B 270 ARG MSE ILE ARG SER TYR ASN ASP LYS GLY GLU TRP VAL SEQRES 21 B 270 SER LEU THR LEU VAL THR GLU GLU ARG VAL MODRES 2O62 MSE A 1 MET SELENOMETHIONINE MODRES 2O62 MSE A 178 MET SELENOMETHIONINE MODRES 2O62 MSE A 248 MET SELENOMETHIONINE MODRES 2O62 MSE B 1 MET SELENOMETHIONINE MODRES 2O62 MSE B 178 MET SELENOMETHIONINE MODRES 2O62 MSE B 248 MET SELENOMETHIONINE HET MSE A 1 4 HET MSE A 178 8 HET MSE A 248 8 HET MSE B 1 4 HET MSE B 178 8 HET MSE B 248 8 HET CL A 270 1 HET CL A 271 1 HET GOL A 272 6 HET GOL A 273 6 HET GOL A 274 6 HET GOL A 275 6 HET GOL A 276 6 HET GOL A 277 6 HET GOL A 278 6 HET GOL A 279 6 HET GOL B 270 6 HET GOL B 271 6 HET GOL B 272 6 HET GOL B 273 6 HET GOL B 274 6 HET GOL B 275 6 HET GOL B 276 6 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 CL 2(CL 1-) FORMUL 5 GOL 15(C3 H8 O3) FORMUL 20 HOH *506(H2 O) HELIX 1 1 SER A 3 GLN A 10 1 8 HELIX 2 2 GLN A 138 LEU A 142 5 5 HELIX 3 3 SER B 3 GLN B 10 1 8 HELIX 4 4 GLN B 138 LEU B 143 1 6 HELIX 5 5 ASP B 204 LYS B 207 5 4 SHEET 1 A 9 VAL A 59 PHE A 63 0 SHEET 2 A 9 THR A 46 ARG A 53 -1 N LEU A 49 O ARG A 61 SHEET 3 A 9 LEU A 28 LEU A 41 -1 N ARG A 35 O SER A 52 SHEET 4 A 9 GLY A 13 PHE A 22 -1 N ASN A 21 O ASN A 30 SHEET 5 A 9 LEU A 116 LEU A 126 -1 O HIS A 125 N GLU A 16 SHEET 6 A 9 ARG A 102 PHE A 110 -1 N LEU A 109 O ASN A 117 SHEET 7 A 9 GLY A 92 HIS A 99 -1 N PHE A 97 O LEU A 104 SHEET 8 A 9 PHE A 78 GLU A 80 -1 N GLU A 80 O GLU A 94 SHEET 9 A 9 LEU A 70 PHE A 72 -1 N LEU A 71 O SER A 79 SHEET 1 B11 GLY A 144 TYR A 154 0 SHEET 2 B11 ASP A 161 LEU A 171 -1 O ILE A 169 N GLY A 144 SHEET 3 B11 LEU A 177 PHE A 183 -1 O MSE A 178 N GLN A 170 SHEET 4 B11 ARG A 186 LYS A 195 -1 O ARG A 186 N PHE A 183 SHEET 5 B11 ILE A 198 PHE A 201 -1 O ILE A 198 N LYS A 195 SHEET 6 B11 VAL A 209 LEU A 213 -1 O VAL A 211 N VAL A 199 SHEET 7 B11 ALA A 218 PRO A 223 -1 O ALA A 220 N LEU A 212 SHEET 8 B11 LEU A 232 GLN A 241 -1 O GLU A 235 N THR A 221 SHEET 9 B11 LEU A 244 TYR A 252 -1 O TYR A 252 N LEU A 232 SHEET 10 B11 TRP A 258 ARG A 268 -1 O VAL A 264 N ARG A 247 SHEET 11 B11 GLY A 144 TYR A 154 -1 N ILE A 153 O LEU A 261 SHEET 1 C 9 VAL B 59 PHE B 63 0 SHEET 2 C 9 THR B 46 ARG B 53 -1 N LEU B 49 O ARG B 61 SHEET 3 C 9 LEU B 28 LEU B 41 -1 N LEU B 41 O THR B 46 SHEET 4 C 9 GLY B 13 PHE B 22 -1 N ASN B 21 O LEU B 29 SHEET 5 C 9 LEU B 116 LEU B 126 -1 O LEU B 121 N SER B 20 SHEET 6 C 9 ARG B 102 PHE B 110 -1 N ARG B 105 O ILE B 122 SHEET 7 C 9 GLY B 92 HIS B 99 -1 N LEU B 95 O LEU B 106 SHEET 8 C 9 PHE B 78 GLY B 81 -1 N GLU B 80 O GLU B 94 SHEET 9 C 9 LEU B 70 PHE B 72 -1 N LEU B 71 O SER B 79 SHEET 1 D11 GLY B 144 TYR B 154 0 SHEET 2 D11 ASP B 161 LEU B 171 -1 O TYR B 163 N ALA B 150 SHEET 3 D11 LEU B 177 SER B 182 -1 O MSE B 178 N GLN B 170 SHEET 4 D11 THR B 187 LYS B 195 -1 O ILE B 188 N THR B 181 SHEET 5 D11 ILE B 198 PHE B 201 -1 O ILE B 198 N LYS B 195 SHEET 6 D11 VAL B 209 LEU B 213 -1 O VAL B 211 N VAL B 199 SHEET 7 D11 ALA B 218 PRO B 223 -1 O SER B 222 N GLN B 210 SHEET 8 D11 LEU B 232 GLN B 241 -1 O GLU B 235 N THR B 221 SHEET 9 D11 LEU B 244 TYR B 252 -1 O ARG B 250 N LEU B 234 SHEET 10 D11 TRP B 258 ARG B 268 -1 O VAL B 264 N ARG B 247 SHEET 11 D11 GLY B 144 TYR B 154 -1 N ILE B 153 O LEU B 261 LINK C MSE A 1 N LYS A 2 1555 1555 1.33 LINK C LEU A 177 N MSE A 178 1555 1555 1.33 LINK C MSE A 178 N GLN A 179 1555 1555 1.33 LINK C ARG A 247 N MSE A 248 1555 1555 1.33 LINK C MSE A 248 N ILE A 249 1555 1555 1.33 LINK C MSE B 1 N LYS B 2 1555 1555 1.33 LINK C LEU B 177 N MSE B 178 1555 1555 1.33 LINK C MSE B 178 N GLN B 179 1555 1555 1.33 LINK C ARG B 247 N MSE B 248 1555 1555 1.32 LINK C MSE B 248 N ILE B 249 1555 1555 1.33 CISPEP 1 ASP A 173 ALA A 174 0 27.59 SITE 1 AC1 2 ASN A 43 TRP B 5 SITE 1 AC2 5 SER A 219 THR A 221 ALA A 236 GLY A 237 SITE 2 AC2 5 HOH A 450 SITE 1 AC3 6 PHE A 183 ARG A 186 SER A 251 THR A 262 SITE 2 AC3 6 HOH A 286 HOH A 356 SITE 1 AC4 7 SER A 33 ARG A 35 ARG A 53 SER A 54 SITE 2 AC4 7 THR A 191 GLN A 203 HOH A 385 SITE 1 AC5 7 LEU A 167 ILE A 169 GLN A 179 VAL A 211 SITE 2 AC5 7 ARG A 245 HOH A 445 HOH A 450 SITE 1 AC6 7 GLY B 86 PRO B 87 SER B 89 ARG B 112 SITE 2 AC6 7 GLY B 114 HOH B 281 HOH B 324 SITE 1 AC7 9 GLY B 17 ARG B 102 ARG B 123 GLU B 124 SITE 2 AC7 9 HIS B 125 VAL B 131 GLU B 133 ASP B 216 SITE 3 AC7 9 HOH B 403 SITE 1 AC8 6 GLU A 16 HIS A 125 ALA A 127 GLY A 128 SITE 2 AC8 6 THR A 129 ASP A 202 SITE 1 AC9 3 GLU A 133 GLN A 241 HOH A 318 SITE 1 BC1 7 HIS A 115 LEU A 116 GLN A 210 PRO A 223 SITE 2 BC1 7 LEU A 224 HOH A 410 HOH A 415 SITE 1 BC2 8 GLU A 90 ASP A 111 ARG A 112 GLU B 90 SITE 2 BC2 8 ASN B 117 ASP B 173 HOH B 299 HOH B 329 SITE 1 BC3 9 GLN A 84 GLY A 86 PRO A 87 PHE A 88 SITE 2 BC3 9 SER A 89 HOH A 504 GLY B 69 GLY B 81 SITE 3 BC3 9 HOH B 376 SITE 1 BC4 6 SER B 164 THR B 165 THR B 166 SER B 182 SITE 2 BC4 6 PHE B 183 GLY B 184 SITE 1 BC5 5 ILE B 169 GLN B 179 ARG B 245 GOL B 275 SITE 2 BC5 5 HOH B 277 SITE 1 BC6 4 PRO A 87 HOH A 431 HOH A 509 HOH B 500 SITE 1 BC7 3 GLN B 179 SER B 190 GOL B 274 SITE 1 BC8 7 PHE B 8 LEU B 38 PHE B 78 GLU B 80 SITE 2 BC8 7 ARG B 103 HOH B 302 HOH B 454 CRYST1 61.210 71.880 132.610 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016340 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013910 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007540 0.00000 HETATM 1 N MSE A 1 21.281 2.410 15.104 1.00 38.81 N HETATM 2 CA MSE A 1 21.752 3.516 14.227 1.00 38.42 C HETATM 3 C MSE A 1 22.819 4.295 14.984 1.00 37.44 C HETATM 4 O MSE A 1 23.912 3.781 15.249 1.00 39.27 O