data_2O8Q # _entry.id 2O8Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2O8Q pdb_00002o8q 10.2210/pdb2o8q/pdb RCSB RCSB040828 ? ? WWPDB D_1000040828 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 369680 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2O8Q _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-12-12 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of hypothetical protein (YP_555756.1) from Burkholderia xenovorans LB400 at 1.55 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2O8Q _cell.length_a 102.255 _cell.length_b 102.255 _cell.length_c 74.746 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2O8Q _symmetry.Int_Tables_number 94 _symmetry.space_group_name_H-M 'P 42 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical protein' 15090.426 2 ? ? ? ? 2 non-polymer syn 'NICKEL (II) ION' 58.693 2 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 8 ? ? ? ? 4 water nat water 18.015 231 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)KLQTTIQHEPKDGSGFDRGLREFFEYRDTGVNEATGG(MSE)FGAHVIRAIPGKEAKPTWHTHTVGFQLFYVLR GWVEFEYEDIGAV(MSE)LEAGGSAFQPPGVRHRELRHSDDLEVLEIVSPAGFATSVVDLEEARKP ; _entity_poly.pdbx_seq_one_letter_code_can ;GMKLQTTIQHEPKDGSGFDRGLREFFEYRDTGVNEATGGMFGAHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYE DIGAVMLEAGGSAFQPPGVRHRELRHSDDLEVLEIVSPAGFATSVVDLEEARKP ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 369680 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 LYS n 1 4 LEU n 1 5 GLN n 1 6 THR n 1 7 THR n 1 8 ILE n 1 9 GLN n 1 10 HIS n 1 11 GLU n 1 12 PRO n 1 13 LYS n 1 14 ASP n 1 15 GLY n 1 16 SER n 1 17 GLY n 1 18 PHE n 1 19 ASP n 1 20 ARG n 1 21 GLY n 1 22 LEU n 1 23 ARG n 1 24 GLU n 1 25 PHE n 1 26 PHE n 1 27 GLU n 1 28 TYR n 1 29 ARG n 1 30 ASP n 1 31 THR n 1 32 GLY n 1 33 VAL n 1 34 ASN n 1 35 GLU n 1 36 ALA n 1 37 THR n 1 38 GLY n 1 39 GLY n 1 40 MSE n 1 41 PHE n 1 42 GLY n 1 43 ALA n 1 44 HIS n 1 45 VAL n 1 46 ILE n 1 47 ARG n 1 48 ALA n 1 49 ILE n 1 50 PRO n 1 51 GLY n 1 52 LYS n 1 53 GLU n 1 54 ALA n 1 55 LYS n 1 56 PRO n 1 57 THR n 1 58 TRP n 1 59 HIS n 1 60 THR n 1 61 HIS n 1 62 THR n 1 63 VAL n 1 64 GLY n 1 65 PHE n 1 66 GLN n 1 67 LEU n 1 68 PHE n 1 69 TYR n 1 70 VAL n 1 71 LEU n 1 72 ARG n 1 73 GLY n 1 74 TRP n 1 75 VAL n 1 76 GLU n 1 77 PHE n 1 78 GLU n 1 79 TYR n 1 80 GLU n 1 81 ASP n 1 82 ILE n 1 83 GLY n 1 84 ALA n 1 85 VAL n 1 86 MSE n 1 87 LEU n 1 88 GLU n 1 89 ALA n 1 90 GLY n 1 91 GLY n 1 92 SER n 1 93 ALA n 1 94 PHE n 1 95 GLN n 1 96 PRO n 1 97 PRO n 1 98 GLY n 1 99 VAL n 1 100 ARG n 1 101 HIS n 1 102 ARG n 1 103 GLU n 1 104 LEU n 1 105 ARG n 1 106 HIS n 1 107 SER n 1 108 ASP n 1 109 ASP n 1 110 LEU n 1 111 GLU n 1 112 VAL n 1 113 LEU n 1 114 GLU n 1 115 ILE n 1 116 VAL n 1 117 SER n 1 118 PRO n 1 119 ALA n 1 120 GLY n 1 121 PHE n 1 122 ALA n 1 123 THR n 1 124 SER n 1 125 VAL n 1 126 VAL n 1 127 ASP n 1 128 LEU n 1 129 GLU n 1 130 GLU n 1 131 ALA n 1 132 ARG n 1 133 LYS n 1 134 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Burkholderia _entity_src_gen.pdbx_gene_src_gene YP_555756.1 _entity_src_gen.gene_src_species 'Burkholderia xenovorans' _entity_src_gen.gene_src_strain LB400 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Burkholderia xenovorans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 266265 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q13HN3_BURXL _struct_ref.pdbx_db_accession Q13HN3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKLQTTIQHEPKDGSGFDRGLREFFEYRDTGVNEATGGMFGAHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYED IGAVMLEAGGSAFQPPGVRHRELRHSDDLEVLEIVSPAGFATSVVDLEEARKP ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2O8Q A 2 ? 134 ? Q13HN3 1 ? 133 ? 1 133 2 1 2O8Q B 2 ? 134 ? Q13HN3 1 ? 133 ? 1 133 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2O8Q GLY A 1 ? UNP Q13HN3 ? ? 'expression tag' 0 1 1 2O8Q MSE A 2 ? UNP Q13HN3 MET 1 'modified residue' 1 2 1 2O8Q MSE A 40 ? UNP Q13HN3 MET 39 'modified residue' 39 3 1 2O8Q MSE A 86 ? UNP Q13HN3 MET 85 'modified residue' 85 4 2 2O8Q GLY B 1 ? UNP Q13HN3 ? ? 'expression tag' 0 5 2 2O8Q MSE B 2 ? UNP Q13HN3 MET 1 'modified residue' 1 6 2 2O8Q MSE B 40 ? UNP Q13HN3 MET 39 'modified residue' 39 7 2 2O8Q MSE B 86 ? UNP Q13HN3 MET 85 'modified residue' 85 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2O8Q # loop_ _exptl_crystal.id _exptl_crystal.density_Matthews _exptl_crystal.density_meas _exptl_crystal.density_percent_sol _exptl_crystal.description _exptl_crystal.F_000 _exptl_crystal.preparation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loop_ _exptl_crystal_grow.crystal_id _exptl_crystal_grow.method _exptl_crystal_grow.pH _exptl_crystal_grow.temp _exptl_crystal_grow.pdbx_details _exptl_crystal_grow.temp_details _exptl_crystal_grow.pdbx_pH_range 1 'VAPOR DIFFUSION, SITTING DROP, NANODROP' 9.0 277 '2.0% Dioxane, 10.0% PEG-20000, 0.1M Bicine pH 9.0, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K' ? . 2 'VAPOR DIFFUSION, SITTING DROP, NANODROP' 6.6 277 '0.2M (NH4)2Tartrate, 20.0% PEG-3350, No Buffer pH 6.6, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K' ? . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 2 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.details _diffrn_detector.pdbx_collection_date 1 CCD 'ADSC QUANTUM 315' '1m long Rh coated bent cylindrical mirror forhorizontal and vertical focussing' 2006-11-17 2 CCD 'MARMOSAIC 300 mm CCD' 'Adjustable focusing mirrors in K-B geometry' 2006-10-20 # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_scattering_type 1 M 'Si(111) Double Crystal Monochromator' 'SINGLE WAVELENGTH' 1 x-ray 2 M 'Si(111) Double Crystal Monochromator' MAD 2 x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.000017 1.0 2 0.97921 1.0 3 0.97888 1.0 4 0.94645 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.type _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_site 1 SYNCHROTRON BL1-5 'SSRL BEAMLINE BL1-5' ? 1.000017 SSRL 2 SYNCHROTRON 23-ID-D 'APS BEAMLINE 23-ID-D' '0.97921, 0.97888, 0.94645' ? APS # _reflns.entry_id 2O8Q _reflns.d_resolution_high 1.550 _reflns.d_resolution_low 29.683 _reflns.number_obs 57924 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_netI_over_sigmaI 7.500 _reflns.pdbx_Rsym_value 0.067 _reflns.pdbx_redundancy 9.100 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate 21.35 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.55 1.59 ? 29089 ? 0.965 0.8 0.965 ? 7.00 ? 4157 99.70 1 1,2 1.59 1.63 ? 28739 ? 0.74 1.0 0.74 ? 7.00 ? 4108 100.00 2 1,2 1.63 1.68 ? 28037 ? 0.583 1.3 0.583 ? 7.00 ? 4016 100.00 3 1,2 1.68 1.73 ? 27398 ? 0.449 1.7 0.449 ? 7.00 ? 3916 100.00 4 1,2 1.73 1.79 ? 26343 ? 0.333 2.3 0.333 ? 7.00 ? 3767 100.00 5 1,2 1.79 1.85 ? 25473 ? 0.237 3.2 0.237 ? 7.00 ? 3647 100.00 6 1,2 1.85 1.92 ? 24698 ? 0.181 4.1 0.181 ? 6.90 ? 3554 100.00 7 1,2 1.92 2.00 ? 23676 ? 0.149 4.8 0.149 ? 7.00 ? 3404 100.00 8 1,2 2.00 2.09 ? 22678 ? 0.132 5.2 0.132 ? 6.90 ? 3282 100.00 9 1,2 2.09 2.19 ? 21747 ? 0.104 6.4 0.104 ? 7.00 ? 3121 100.00 10 1,2 2.19 2.31 ? 32914 ? 0.145 4.6 0.145 ? 11.00 ? 2996 100.00 11 1,2 2.31 2.45 ? 36734 ? 0.132 5.1 0.132 ? 12.90 ? 2841 100.00 12 1,2 2.45 2.62 ? 37178 ? 0.107 6.4 0.107 ? 13.90 ? 2680 100.00 13 1,2 2.62 2.83 ? 34245 ? 0.083 8.0 0.083 ? 13.70 ? 2497 100.00 14 1,2 2.83 3.10 ? 31368 ? 0.065 10.2 0.065 ? 13.50 ? 2325 100.00 15 1,2 3.10 3.47 ? 26902 ? 0.052 12.1 0.052 ? 12.80 ? 2101 100.00 16 1,2 3.47 4.00 ? 25814 ? 0.04 15.6 0.04 ? 13.80 ? 1874 100.00 17 1,2 4.00 4.90 ? 21169 ? 0.039 14.4 0.039 ? 13.20 ? 1609 100.00 18 1,2 4.90 6.93 ? 15914 ? 0.044 13.1 0.044 ? 12.50 ? 1275 100.00 19 1,2 6.93 29.68 ? 8226 ? 0.032 18.0 0.032 ? 10.90 ? 754 98.60 20 1,2 # _refine.entry_id 2O8Q _refine.ls_d_res_high 1.550 _refine.ls_d_res_low 29.683 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.950 _refine.ls_number_reflns_obs 57868 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;(1). HYDROGENS HAVE BEEN ADDED IN RIDING POSITIONS. (2). ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. (3). A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. (4). A NI ATOM ON EACH OF THE TWO SUBUNITS IN THE ASYMMETRIC UNIT IS COORDINATED TO THE SIDE CHAIN OF HIS 58, HIS 60, HIS 100, AND THREE WATERS. ANOMALOUS DIFFERENCE FOURIERS AND X-RAY FLUORESCENCE EXPERIMENTS SUPPORT THE ASSIGNMENT THE NI IONS. (5). RESIDUES 20-21 AND 50-54 ON THE A SUBUNIT AND 20-22 ON THE B SUBUNIT ARE DISORDERED AND WERE NOT MODELED. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17 _refine.ls_R_factor_R_free 0.191 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 2939 _refine.B_iso_mean 20.305 _refine.aniso_B[1][1] -0.030 _refine.aniso_B[2][2] -0.030 _refine.aniso_B[3][3] 0.050 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.957 _refine.pdbx_overall_ESU_R 0.059 _refine.pdbx_overall_ESU_R_Free 0.061 _refine.overall_SU_ML 0.038 _refine.overall_SU_B 1.898 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.171 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1900 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 231 _refine_hist.number_atoms_total 2165 _refine_hist.d_res_high 1.550 _refine_hist.d_res_low 29.683 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2081 0.017 0.021 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1399 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2820 1.837 1.933 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 3378 1.006 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 262 9.118 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 104 27.541 23.558 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 308 12.652 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14 19.630 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 295 0.114 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2398 0.008 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 460 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 382 0.202 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1486 0.209 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 970 0.183 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 1146 0.087 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 173 0.183 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 20 0.280 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 62 0.373 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 15 0.240 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1305 2.062 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 525 0.516 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2049 3.183 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 878 4.504 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 771 6.464 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.550 _refine_ls_shell.d_res_low 1.590 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.830 _refine_ls_shell.number_reflns_R_work 3968 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.255 _refine_ls_shell.R_factor_R_free 0.289 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 238 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 4206 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2O8Q _struct.title ;CRYSTAL STRUCTURE OF A PROTEIN WITH A CUPIN-LIKE FOLD AND UNKNOWN FUNCTION (BXE_C0505) FROM BURKHOLDERIA XENOVORANS LB400 AT 1.55 A RESOLUTION ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;CPUIN-LIKE FOLD, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, METAL BINDING PROTEIN ; _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' _struct_keywords.entry_id 2O8Q # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 2 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 4 ? N N N 4 ? # _struct_biol.id 1 _struct_biol.details ;SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A TETRAMER AS A BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 32 ? GLY A 38 ? GLY A 31 GLY A 37 1 ? 7 HELX_P HELX_P2 2 GLY B 32 ? GLY B 38 ? GLY B 31 GLY B 37 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 1 C ? ? ? 1_555 A MSE 2 N ? ? A GLY 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale2 covale both ? A MSE 2 C ? ? ? 1_555 A LYS 3 N ? ? A MSE 1 A LYS 2 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale3 covale both ? A GLY 39 C ? ? ? 1_555 A MSE 40 N A ? A GLY 38 A MSE 39 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale4 covale both ? A GLY 39 C ? ? ? 1_555 A MSE 40 N B ? A GLY 38 A MSE 39 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale5 covale both ? A MSE 40 C A ? ? 1_555 A PHE 41 N ? ? A MSE 39 A PHE 40 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale6 covale both ? A MSE 40 C B ? ? 1_555 A PHE 41 N ? ? A MSE 39 A PHE 40 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale7 covale both ? A VAL 85 C ? ? ? 1_555 A MSE 86 N ? ? A VAL 84 A MSE 85 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale8 covale both ? A MSE 86 C ? ? ? 1_555 A LEU 87 N ? ? A MSE 85 A LEU 86 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale9 covale both ? B MSE 2 C ? ? ? 1_555 B LYS 3 N ? ? B MSE 1 B LYS 2 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale10 covale both ? B GLY 39 C ? ? ? 1_555 B MSE 40 N A ? B GLY 38 B MSE 39 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale11 covale both ? B GLY 39 C ? ? ? 1_555 B MSE 40 N B ? B GLY 38 B MSE 39 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale12 covale both ? B MSE 40 C B ? ? 1_555 B PHE 41 N ? ? B MSE 39 B PHE 40 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale13 covale both ? B MSE 40 C A ? ? 1_555 B PHE 41 N ? ? B MSE 39 B PHE 40 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale14 covale both ? B VAL 85 C B ? ? 1_555 B MSE 86 N ? ? B VAL 84 B MSE 85 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale15 covale both ? B VAL 85 C A ? ? 1_555 B MSE 86 N ? ? B VAL 84 B MSE 85 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale16 covale both ? B MSE 86 C ? ? ? 1_555 B LEU 87 N ? ? B MSE 85 B LEU 86 1_555 ? ? ? ? ? ? ? 1.334 ? ? metalc1 metalc ? ? A HIS 59 NE2 ? ? ? 1_555 C NI . NI ? ? A HIS 58 A NI 300 1_555 ? ? ? ? ? ? ? 2.092 ? ? metalc2 metalc ? ? A HIS 61 NE2 ? ? ? 1_555 C NI . NI ? ? A HIS 60 A NI 300 1_555 ? ? ? ? ? ? ? 2.082 ? ? metalc3 metalc ? ? A HIS 101 NE2 ? ? ? 1_555 C NI . NI ? ? A HIS 100 A NI 300 1_555 ? ? ? ? ? ? ? 2.145 ? ? metalc4 metalc ? ? C NI . NI ? ? ? 1_555 M HOH . O ? ? A NI 300 A HOH 340 1_555 ? ? ? ? ? ? ? 2.150 ? ? metalc5 metalc ? ? C NI . NI ? ? ? 1_555 M HOH . O ? ? A NI 300 A HOH 346 1_555 ? ? ? ? ? ? ? 2.150 ? ? metalc6 metalc ? ? C NI . NI ? ? ? 1_555 M HOH . O ? ? A NI 300 A HOH 377 1_555 ? ? ? ? ? ? ? 2.125 ? ? metalc7 metalc ? ? B HIS 59 NE2 ? ? ? 1_555 H NI . NI ? ? B HIS 58 B NI 300 1_555 ? ? ? ? ? ? ? 2.095 ? ? metalc8 metalc ? ? B HIS 61 NE2 ? ? ? 1_555 H NI . NI ? ? B HIS 60 B NI 300 1_555 ? ? ? ? ? ? ? 2.095 ? ? metalc9 metalc ? ? B HIS 101 NE2 ? ? ? 1_555 H NI . NI ? ? B HIS 100 B NI 300 1_555 ? ? ? ? ? ? ? 2.139 ? ? metalc10 metalc ? ? H NI . NI ? ? ? 1_555 N HOH . O ? ? B NI 300 B HOH 362 1_555 ? ? ? ? ? ? ? 2.155 ? ? metalc11 metalc ? ? H NI . NI ? ? ? 1_555 N HOH . O ? ? B NI 300 B HOH 393 1_555 ? ? ? ? ? ? ? 2.204 ? ? metalc12 metalc ? ? H NI . NI ? ? ? 1_555 N HOH . O ? ? B NI 300 B HOH 413 1_555 ? ? ? ? ? ? ? 2.127 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 117 A . ? SER 116 A PRO 118 A ? PRO 117 A 1 -5.61 2 SER 117 B . ? SER 116 B PRO 118 B ? PRO 117 B 1 -7.93 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? C ? 3 ? D ? 6 ? E ? 2 ? F ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel D 5 6 ? anti-parallel E 1 2 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 7 ? GLN A 9 ? THR A 6 GLN A 8 A 2 SER A 92 ? PHE A 94 ? SER A 91 PHE A 93 A 3 GLN A 66 ? ARG A 72 ? GLN A 65 ARG A 71 A 4 GLU A 111 ? VAL A 116 ? GLU A 110 VAL A 115 A 5 GLY A 42 ? ALA A 48 ? GLY A 41 ALA A 47 A 6 PHE A 26 ? ASP A 30 ? PHE A 25 ASP A 29 B 1 HIS A 59 ? HIS A 61 ? HIS A 58 HIS A 60 B 2 THR A 123 ? VAL A 125 ? THR A 122 VAL A 124 C 1 GLY A 83 ? GLU A 88 ? GLY A 82 GLU A 87 C 2 TRP A 74 ? TYR A 79 ? TRP A 73 TYR A 78 C 3 HIS A 101 ? HIS A 106 ? HIS A 100 HIS A 105 D 1 THR B 7 ? GLN B 9 ? THR B 6 GLN B 8 D 2 SER B 92 ? PHE B 94 ? SER B 91 PHE B 93 D 3 GLN B 66 ? ARG B 72 ? GLN B 65 ARG B 71 D 4 GLU B 111 ? VAL B 116 ? GLU B 110 VAL B 115 D 5 GLY B 42 ? ALA B 48 ? GLY B 41 ALA B 47 D 6 PHE B 26 ? ASP B 30 ? PHE B 25 ASP B 29 E 1 HIS B 59 ? HIS B 61 ? HIS B 58 HIS B 60 E 2 THR B 123 ? VAL B 125 ? THR B 122 VAL B 124 F 1 GLY B 83 ? GLU B 88 ? GLY B 82 GLU B 87 F 2 TRP B 74 ? TYR B 79 ? TRP B 73 TYR B 78 F 3 HIS B 101 ? HIS B 106 ? HIS B 100 HIS B 105 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 7 ? N THR A 6 O PHE A 94 ? O PHE A 93 A 2 3 O ALA A 93 ? O ALA A 92 N PHE A 68 ? N PHE A 67 A 3 4 N LEU A 71 ? N LEU A 70 O GLU A 111 ? O GLU A 110 A 4 5 O VAL A 112 ? O VAL A 111 N ILE A 46 ? N ILE A 45 A 5 6 O ARG A 47 ? O ARG A 46 N GLU A 27 ? N GLU A 26 B 1 2 N THR A 60 ? N THR A 59 O SER A 124 ? O SER A 123 C 1 2 O LEU A 87 ? O LEU A 86 N VAL A 75 ? N VAL A 74 C 2 3 N GLU A 76 ? N GLU A 75 O ARG A 105 ? O ARG A 104 D 1 2 N THR B 7 ? N THR B 6 O PHE B 94 ? O PHE B 93 D 2 3 O ALA B 93 ? O ALA B 92 N PHE B 68 ? N PHE B 67 D 3 4 N TYR B 69 ? N TYR B 68 O LEU B 113 ? O LEU B 112 D 4 5 O VAL B 112 ? O VAL B 111 N ILE B 46 ? N ILE B 45 D 5 6 O ARG B 47 ? O ARG B 46 N GLU B 27 ? N GLU B 26 E 1 2 N THR B 60 ? N THR B 59 O SER B 124 ? O SER B 123 F 1 2 O LEU B 87 ? O LEU B 86 N VAL B 75 ? N VAL B 74 F 2 3 N GLU B 76 ? N GLU B 75 O ARG B 105 ? O ARG B 104 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NI 300 ? 6 'BINDING SITE FOR RESIDUE NI A 300' AC2 Software B NI 300 ? 6 'BINDING SITE FOR RESIDUE NI B 300' AC3 Software B EDO 302 ? 2 'BINDING SITE FOR RESIDUE EDO B 302' AC4 Software A EDO 301 ? 1 'BINDING SITE FOR RESIDUE EDO A 301' AC5 Software A EDO 302 ? 6 'BINDING SITE FOR RESIDUE EDO A 302' AC6 Software A EDO 303 ? 5 'BINDING SITE FOR RESIDUE EDO A 303' AC7 Software B EDO 303 ? 4 'BINDING SITE FOR RESIDUE EDO B 303' AC8 Software A EDO 304 ? 4 'BINDING SITE FOR RESIDUE EDO A 304' AC9 Software B EDO 304 ? 5 'BINDING SITE FOR RESIDUE EDO B 304' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HIS A 59 ? HIS A 58 . ? 1_555 ? 2 AC1 6 HIS A 61 ? HIS A 60 . ? 1_555 ? 3 AC1 6 HIS A 101 ? HIS A 100 . ? 1_555 ? 4 AC1 6 HOH M . ? HOH A 340 . ? 1_555 ? 5 AC1 6 HOH M . ? HOH A 346 . ? 1_555 ? 6 AC1 6 HOH M . ? HOH A 377 . ? 1_555 ? 7 AC2 6 HIS B 59 ? HIS B 58 . ? 1_555 ? 8 AC2 6 HIS B 61 ? HIS B 60 . ? 1_555 ? 9 AC2 6 HIS B 101 ? HIS B 100 . ? 1_555 ? 10 AC2 6 HOH N . ? HOH B 362 . ? 1_555 ? 11 AC2 6 HOH N . ? HOH B 393 . ? 1_555 ? 12 AC2 6 HOH N . ? HOH B 413 . ? 1_555 ? 13 AC3 2 PHE B 26 ? PHE B 25 . ? 1_555 ? 14 AC3 2 TYR B 28 ? TYR B 27 . ? 1_555 ? 15 AC4 1 HIS A 59 ? HIS A 58 . ? 1_555 ? 16 AC5 6 GLY A 15 ? GLY A 14 . ? 1_555 ? 17 AC5 6 SER A 16 ? SER A 15 . ? 1_555 ? 18 AC5 6 GLY A 17 ? GLY A 16 . ? 1_555 ? 19 AC5 6 PHE A 18 ? PHE A 17 . ? 1_555 ? 20 AC5 6 GLU B 27 ? GLU B 26 . ? 1_555 ? 21 AC5 6 ARG B 47 ? ARG B 46 . ? 1_555 ? 22 AC6 5 MSE A 40 ? MSE A 39 . ? 1_555 ? 23 AC6 5 SER A 117 ? SER A 116 . ? 1_555 ? 24 AC6 5 GLY B 64 ? GLY B 63 . ? 7_556 ? 25 AC6 5 PHE B 65 ? PHE B 64 . ? 7_556 ? 26 AC6 5 SER B 117 ? SER B 116 . ? 7_556 ? 27 AC7 4 GLY B 17 ? GLY B 16 . ? 1_555 ? 28 AC7 4 PHE B 18 ? PHE B 17 . ? 1_555 ? 29 AC7 4 ASP B 19 ? ASP B 18 . ? 1_555 ? 30 AC7 4 HOH N . ? HOH B 324 . ? 1_555 ? 31 AC8 4 THR A 6 ? THR A 5 . ? 1_555 ? 32 AC8 4 ILE A 8 ? ILE A 7 . ? 1_555 ? 33 AC8 4 ILE A 82 ? ILE A 81 . ? 1_555 ? 34 AC8 4 HOH M . ? HOH A 407 . ? 1_555 ? 35 AC9 5 GLU A 35 ? GLU A 34 . ? 1_555 ? 36 AC9 5 HOH M . ? HOH A 326 . ? 1_555 ? 37 AC9 5 GLN B 5 ? GLN B 4 . ? 1_555 ? 38 AC9 5 THR B 7 ? THR B 6 . ? 1_555 ? 39 AC9 5 HOH N . ? HOH B 391 . ? 1_555 ? # _atom_sites.entry_id 2O8Q _atom_sites.fract_transf_matrix[1][1] 0.00978 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.00978 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.01338 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 LYS 3 2 2 LYS LYS A . n A 1 4 LEU 4 3 3 LEU LEU A . n A 1 5 GLN 5 4 4 GLN GLN A . n A 1 6 THR 6 5 5 THR THR A . n A 1 7 THR 7 6 6 THR THR A . n A 1 8 ILE 8 7 7 ILE ILE A . n A 1 9 GLN 9 8 8 GLN GLN A . n A 1 10 HIS 10 9 9 HIS HIS A . n A 1 11 GLU 11 10 10 GLU GLU A . n A 1 12 PRO 12 11 11 PRO PRO A . n A 1 13 LYS 13 12 12 LYS LYS A . n A 1 14 ASP 14 13 13 ASP ASP A . n A 1 15 GLY 15 14 14 GLY GLY A . n A 1 16 SER 16 15 15 SER SER A . n A 1 17 GLY 17 16 16 GLY GLY A . n A 1 18 PHE 18 17 17 PHE PHE A . n A 1 19 ASP 19 18 18 ASP ASP A . n A 1 20 ARG 20 19 19 ARG ARG A . n A 1 21 GLY 21 20 ? ? ? A . n A 1 22 LEU 22 21 ? ? ? A . n A 1 23 ARG 23 22 22 ARG ARG A . n A 1 24 GLU 24 23 23 GLU GLU A . n A 1 25 PHE 25 24 24 PHE PHE A . n A 1 26 PHE 26 25 25 PHE PHE A . n A 1 27 GLU 27 26 26 GLU GLU A . n A 1 28 TYR 28 27 27 TYR TYR A . n A 1 29 ARG 29 28 28 ARG ARG A . n A 1 30 ASP 30 29 29 ASP ASP A . n A 1 31 THR 31 30 30 THR THR A . n A 1 32 GLY 32 31 31 GLY GLY A . n A 1 33 VAL 33 32 32 VAL VAL A . n A 1 34 ASN 34 33 33 ASN ASN A . n A 1 35 GLU 35 34 34 GLU GLU A . n A 1 36 ALA 36 35 35 ALA ALA A . n A 1 37 THR 37 36 36 THR THR A . n A 1 38 GLY 38 37 37 GLY GLY A . n A 1 39 GLY 39 38 38 GLY GLY A . n A 1 40 MSE 40 39 39 MSE MSE A . n A 1 41 PHE 41 40 40 PHE PHE A . n A 1 42 GLY 42 41 41 GLY GLY A . n A 1 43 ALA 43 42 42 ALA ALA A . n A 1 44 HIS 44 43 43 HIS HIS A . n A 1 45 VAL 45 44 44 VAL VAL A . n A 1 46 ILE 46 45 45 ILE ILE A . n A 1 47 ARG 47 46 46 ARG ARG A . n A 1 48 ALA 48 47 47 ALA ALA A . n A 1 49 ILE 49 48 48 ILE ILE A . n A 1 50 PRO 50 49 49 PRO PRO A . n A 1 51 GLY 51 50 ? ? ? A . n A 1 52 LYS 52 51 ? ? ? A . n A 1 53 GLU 53 52 ? ? ? A . n A 1 54 ALA 54 53 ? ? ? A . n A 1 55 LYS 55 54 ? ? ? A . n A 1 56 PRO 56 55 55 PRO PRO A . n A 1 57 THR 57 56 56 THR THR A . n A 1 58 TRP 58 57 57 TRP TRP A . n A 1 59 HIS 59 58 58 HIS HIS A . n A 1 60 THR 60 59 59 THR THR A . n A 1 61 HIS 61 60 60 HIS HIS A . n A 1 62 THR 62 61 61 THR THR A . n A 1 63 VAL 63 62 62 VAL VAL A . n A 1 64 GLY 64 63 63 GLY GLY A . n A 1 65 PHE 65 64 64 PHE PHE A . n A 1 66 GLN 66 65 65 GLN GLN A . n A 1 67 LEU 67 66 66 LEU LEU A . n A 1 68 PHE 68 67 67 PHE PHE A . n A 1 69 TYR 69 68 68 TYR TYR A . n A 1 70 VAL 70 69 69 VAL VAL A . n A 1 71 LEU 71 70 70 LEU LEU A . n A 1 72 ARG 72 71 71 ARG ARG A . n A 1 73 GLY 73 72 72 GLY GLY A . n A 1 74 TRP 74 73 73 TRP TRP A . n A 1 75 VAL 75 74 74 VAL VAL A . n A 1 76 GLU 76 75 75 GLU GLU A . n A 1 77 PHE 77 76 76 PHE PHE A . n A 1 78 GLU 78 77 77 GLU GLU A . n A 1 79 TYR 79 78 78 TYR TYR A . n A 1 80 GLU 80 79 79 GLU GLU A . n A 1 81 ASP 81 80 80 ASP ASP A . n A 1 82 ILE 82 81 81 ILE ILE A . n A 1 83 GLY 83 82 82 GLY GLY A . n A 1 84 ALA 84 83 83 ALA ALA A . n A 1 85 VAL 85 84 84 VAL VAL A . n A 1 86 MSE 86 85 85 MSE MSE A . n A 1 87 LEU 87 86 86 LEU LEU A . n A 1 88 GLU 88 87 87 GLU GLU A . n A 1 89 ALA 89 88 88 ALA ALA A . n A 1 90 GLY 90 89 89 GLY GLY A . n A 1 91 GLY 91 90 90 GLY GLY A . n A 1 92 SER 92 91 91 SER SER A . n A 1 93 ALA 93 92 92 ALA ALA A . n A 1 94 PHE 94 93 93 PHE PHE A . n A 1 95 GLN 95 94 94 GLN GLN A . n A 1 96 PRO 96 95 95 PRO PRO A . n A 1 97 PRO 97 96 96 PRO PRO A . n A 1 98 GLY 98 97 97 GLY GLY A . n A 1 99 VAL 99 98 98 VAL VAL A . n A 1 100 ARG 100 99 99 ARG ARG A . n A 1 101 HIS 101 100 100 HIS HIS A . n A 1 102 ARG 102 101 101 ARG ARG A . n A 1 103 GLU 103 102 102 GLU GLU A . n A 1 104 LEU 104 103 103 LEU LEU A . n A 1 105 ARG 105 104 104 ARG ARG A . n A 1 106 HIS 106 105 105 HIS HIS A . n A 1 107 SER 107 106 106 SER SER A . n A 1 108 ASP 108 107 107 ASP ASP A . n A 1 109 ASP 109 108 108 ASP ASP A . n A 1 110 LEU 110 109 109 LEU LEU A . n A 1 111 GLU 111 110 110 GLU GLU A . n A 1 112 VAL 112 111 111 VAL VAL A . n A 1 113 LEU 113 112 112 LEU LEU A . n A 1 114 GLU 114 113 113 GLU GLU A . n A 1 115 ILE 115 114 114 ILE ILE A . n A 1 116 VAL 116 115 115 VAL VAL A . n A 1 117 SER 117 116 116 SER SER A . n A 1 118 PRO 118 117 117 PRO PRO A . n A 1 119 ALA 119 118 118 ALA ALA A . n A 1 120 GLY 120 119 119 GLY GLY A . n A 1 121 PHE 121 120 120 PHE PHE A . n A 1 122 ALA 122 121 121 ALA ALA A . n A 1 123 THR 123 122 122 THR THR A . n A 1 124 SER 124 123 123 SER SER A . n A 1 125 VAL 125 124 124 VAL VAL A . n A 1 126 VAL 126 125 125 VAL VAL A . n A 1 127 ASP 127 126 126 ASP ASP A . n A 1 128 LEU 128 127 127 LEU LEU A . n A 1 129 GLU 129 128 128 GLU GLU A . n A 1 130 GLU 130 129 ? ? ? A . n A 1 131 ALA 131 130 ? ? ? A . n A 1 132 ARG 132 131 ? ? ? A . n A 1 133 LYS 133 132 ? ? ? A . n A 1 134 PRO 134 133 ? ? ? A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 MSE 2 1 1 MSE MSE B . n B 1 3 LYS 3 2 2 LYS LYS B . n B 1 4 LEU 4 3 3 LEU LEU B . n B 1 5 GLN 5 4 4 GLN GLN B . n B 1 6 THR 6 5 5 THR THR B . n B 1 7 THR 7 6 6 THR THR B . n B 1 8 ILE 8 7 7 ILE ILE B . n B 1 9 GLN 9 8 8 GLN GLN B . n B 1 10 HIS 10 9 9 HIS HIS B . n B 1 11 GLU 11 10 10 GLU GLU B . n B 1 12 PRO 12 11 11 PRO PRO B . n B 1 13 LYS 13 12 12 LYS LYS B . n B 1 14 ASP 14 13 13 ASP ASP B . n B 1 15 GLY 15 14 14 GLY GLY B . n B 1 16 SER 16 15 15 SER SER B . n B 1 17 GLY 17 16 16 GLY GLY B . n B 1 18 PHE 18 17 17 PHE PHE B . n B 1 19 ASP 19 18 18 ASP ASP B . n B 1 20 ARG 20 19 19 ARG ARG B . n B 1 21 GLY 21 20 ? ? ? B . n B 1 22 LEU 22 21 ? ? ? B . n B 1 23 ARG 23 22 ? ? ? B . n B 1 24 GLU 24 23 23 GLU GLU B . n B 1 25 PHE 25 24 24 PHE PHE B . n B 1 26 PHE 26 25 25 PHE PHE B . n B 1 27 GLU 27 26 26 GLU GLU B . n B 1 28 TYR 28 27 27 TYR TYR B . n B 1 29 ARG 29 28 28 ARG ARG B . n B 1 30 ASP 30 29 29 ASP ASP B . n B 1 31 THR 31 30 30 THR THR B . n B 1 32 GLY 32 31 31 GLY GLY B . n B 1 33 VAL 33 32 32 VAL VAL B . n B 1 34 ASN 34 33 33 ASN ASN B . n B 1 35 GLU 35 34 34 GLU GLU B . n B 1 36 ALA 36 35 35 ALA ALA B . n B 1 37 THR 37 36 36 THR THR B . n B 1 38 GLY 38 37 37 GLY GLY B . n B 1 39 GLY 39 38 38 GLY GLY B . n B 1 40 MSE 40 39 39 MSE MSE B . n B 1 41 PHE 41 40 40 PHE PHE B . n B 1 42 GLY 42 41 41 GLY GLY B . n B 1 43 ALA 43 42 42 ALA ALA B . n B 1 44 HIS 44 43 43 HIS HIS B . n B 1 45 VAL 45 44 44 VAL VAL B . n B 1 46 ILE 46 45 45 ILE ILE B . n B 1 47 ARG 47 46 46 ARG ARG B . n B 1 48 ALA 48 47 47 ALA ALA B . n B 1 49 ILE 49 48 48 ILE ILE B . n B 1 50 PRO 50 49 49 PRO PRO B . n B 1 51 GLY 51 50 ? ? ? B . n B 1 52 LYS 52 51 ? ? ? B . n B 1 53 GLU 53 52 52 GLU GLU B . n B 1 54 ALA 54 53 53 ALA ALA B . n B 1 55 LYS 55 54 54 LYS LYS B . n B 1 56 PRO 56 55 55 PRO PRO B . n B 1 57 THR 57 56 56 THR THR B . n B 1 58 TRP 58 57 57 TRP TRP B . n B 1 59 HIS 59 58 58 HIS HIS B . n B 1 60 THR 60 59 59 THR THR B . n B 1 61 HIS 61 60 60 HIS HIS B . n B 1 62 THR 62 61 61 THR THR B . n B 1 63 VAL 63 62 62 VAL VAL B . n B 1 64 GLY 64 63 63 GLY GLY B . n B 1 65 PHE 65 64 64 PHE PHE B . n B 1 66 GLN 66 65 65 GLN GLN B . n B 1 67 LEU 67 66 66 LEU LEU B . n B 1 68 PHE 68 67 67 PHE PHE B . n B 1 69 TYR 69 68 68 TYR TYR B . n B 1 70 VAL 70 69 69 VAL VAL B . n B 1 71 LEU 71 70 70 LEU LEU B . n B 1 72 ARG 72 71 71 ARG ARG B . n B 1 73 GLY 73 72 72 GLY GLY B . n B 1 74 TRP 74 73 73 TRP TRP B . n B 1 75 VAL 75 74 74 VAL VAL B . n B 1 76 GLU 76 75 75 GLU GLU B . n B 1 77 PHE 77 76 76 PHE PHE B . n B 1 78 GLU 78 77 77 GLU GLU B . n B 1 79 TYR 79 78 78 TYR TYR B . n B 1 80 GLU 80 79 79 GLU GLU B . n B 1 81 ASP 81 80 80 ASP ASP B . n B 1 82 ILE 82 81 81 ILE ILE B . n B 1 83 GLY 83 82 82 GLY GLY B . n B 1 84 ALA 84 83 83 ALA ALA B . n B 1 85 VAL 85 84 84 VAL VAL B . n B 1 86 MSE 86 85 85 MSE MSE B . n B 1 87 LEU 87 86 86 LEU LEU B . n B 1 88 GLU 88 87 87 GLU GLU B . n B 1 89 ALA 89 88 88 ALA ALA B . n B 1 90 GLY 90 89 89 GLY GLY B . n B 1 91 GLY 91 90 90 GLY GLY B . n B 1 92 SER 92 91 91 SER SER B . n B 1 93 ALA 93 92 92 ALA ALA B . n B 1 94 PHE 94 93 93 PHE PHE B . n B 1 95 GLN 95 94 94 GLN GLN B . n B 1 96 PRO 96 95 95 PRO PRO B . n B 1 97 PRO 97 96 96 PRO PRO B . n B 1 98 GLY 98 97 97 GLY GLY B . n B 1 99 VAL 99 98 98 VAL VAL B . n B 1 100 ARG 100 99 99 ARG ARG B . n B 1 101 HIS 101 100 100 HIS HIS B . n B 1 102 ARG 102 101 101 ARG ARG B . n B 1 103 GLU 103 102 102 GLU GLU B . n B 1 104 LEU 104 103 103 LEU LEU B . n B 1 105 ARG 105 104 104 ARG ARG B . n B 1 106 HIS 106 105 105 HIS HIS B . n B 1 107 SER 107 106 106 SER SER B . n B 1 108 ASP 108 107 107 ASP ASP B . n B 1 109 ASP 109 108 108 ASP ASP B . n B 1 110 LEU 110 109 109 LEU LEU B . n B 1 111 GLU 111 110 110 GLU GLU B . n B 1 112 VAL 112 111 111 VAL VAL B . n B 1 113 LEU 113 112 112 LEU LEU B . n B 1 114 GLU 114 113 113 GLU GLU B . n B 1 115 ILE 115 114 114 ILE ILE B . n B 1 116 VAL 116 115 115 VAL VAL B . n B 1 117 SER 117 116 116 SER SER B . n B 1 118 PRO 118 117 117 PRO PRO B . n B 1 119 ALA 119 118 118 ALA ALA B . n B 1 120 GLY 120 119 119 GLY GLY B . n B 1 121 PHE 121 120 120 PHE PHE B . n B 1 122 ALA 122 121 121 ALA ALA B . n B 1 123 THR 123 122 122 THR THR B . n B 1 124 SER 124 123 123 SER SER B . n B 1 125 VAL 125 124 124 VAL VAL B . n B 1 126 VAL 126 125 125 VAL VAL B . n B 1 127 ASP 127 126 126 ASP ASP B . n B 1 128 LEU 128 127 127 LEU LEU B . n B 1 129 GLU 129 128 ? ? ? B . n B 1 130 GLU 130 129 ? ? ? B . n B 1 131 ALA 131 130 ? ? ? B . n B 1 132 ARG 132 131 ? ? ? B . n B 1 133 LYS 133 132 ? ? ? B . n B 1 134 PRO 134 133 ? ? ? B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NI 1 300 300 NI NI A . D 3 EDO 1 301 3 EDO EDO A . E 3 EDO 1 302 4 EDO EDO A . F 3 EDO 1 303 5 EDO EDO A . G 3 EDO 1 304 7 EDO EDO A . H 2 NI 1 300 300 NI NI B . I 3 EDO 1 301 1 EDO EDO B . J 3 EDO 1 302 2 EDO EDO B . K 3 EDO 1 303 6 EDO EDO B . L 3 EDO 1 304 8 EDO EDO B . M 4 HOH 1 305 24 HOH HOH A . M 4 HOH 2 306 25 HOH HOH A . M 4 HOH 3 307 26 HOH HOH A . M 4 HOH 4 308 27 HOH HOH A . M 4 HOH 5 309 31 HOH HOH A . M 4 HOH 6 310 33 HOH HOH A . M 4 HOH 7 311 34 HOH HOH A . M 4 HOH 8 312 35 HOH HOH A . M 4 HOH 9 313 37 HOH HOH A . M 4 HOH 10 314 39 HOH HOH A . M 4 HOH 11 315 42 HOH HOH A . M 4 HOH 12 316 45 HOH HOH A . M 4 HOH 13 317 49 HOH HOH A . M 4 HOH 14 318 50 HOH HOH A . M 4 HOH 15 319 51 HOH HOH A . M 4 HOH 16 320 55 HOH HOH A . M 4 HOH 17 321 56 HOH HOH A . M 4 HOH 18 322 57 HOH HOH A . M 4 HOH 19 323 58 HOH HOH A . M 4 HOH 20 324 60 HOH HOH A . M 4 HOH 21 325 61 HOH HOH A . M 4 HOH 22 326 62 HOH HOH A . M 4 HOH 23 327 63 HOH HOH A . M 4 HOH 24 328 65 HOH HOH A . M 4 HOH 25 329 66 HOH HOH A . M 4 HOH 26 330 67 HOH HOH A . M 4 HOH 27 331 69 HOH HOH A . M 4 HOH 28 332 71 HOH HOH A . M 4 HOH 29 333 72 HOH HOH A . M 4 HOH 30 334 77 HOH HOH A . M 4 HOH 31 335 78 HOH HOH A . M 4 HOH 32 336 80 HOH HOH A . M 4 HOH 33 337 86 HOH HOH A . M 4 HOH 34 338 87 HOH HOH A . M 4 HOH 35 339 88 HOH HOH A . M 4 HOH 36 340 89 HOH HOH A . M 4 HOH 37 341 90 HOH HOH A . M 4 HOH 38 342 93 HOH HOH A . M 4 HOH 39 343 94 HOH HOH A . M 4 HOH 40 344 95 HOH HOH A . M 4 HOH 41 345 97 HOH HOH A . M 4 HOH 42 346 100 HOH HOH A . M 4 HOH 43 347 103 HOH HOH A . M 4 HOH 44 348 106 HOH HOH A . M 4 HOH 45 349 107 HOH HOH A . M 4 HOH 46 350 110 HOH HOH A . M 4 HOH 47 351 112 HOH HOH A . M 4 HOH 48 352 113 HOH HOH A . M 4 HOH 49 353 115 HOH HOH A . M 4 HOH 50 354 116 HOH HOH A . M 4 HOH 51 355 119 HOH HOH A . M 4 HOH 52 356 120 HOH HOH A . M 4 HOH 53 357 121 HOH HOH A . M 4 HOH 54 358 122 HOH HOH A . M 4 HOH 55 359 124 HOH HOH A . M 4 HOH 56 360 130 HOH HOH A . M 4 HOH 57 361 132 HOH HOH A . M 4 HOH 58 362 133 HOH HOH A . M 4 HOH 59 363 134 HOH HOH A . M 4 HOH 60 364 137 HOH HOH A . M 4 HOH 61 365 139 HOH HOH A . M 4 HOH 62 366 141 HOH HOH A . M 4 HOH 63 367 142 HOH HOH A . M 4 HOH 64 368 144 HOH HOH A . M 4 HOH 65 369 150 HOH HOH A . M 4 HOH 66 370 152 HOH HOH A . M 4 HOH 67 371 159 HOH HOH A . M 4 HOH 68 372 160 HOH HOH A . M 4 HOH 69 373 161 HOH HOH A . M 4 HOH 70 374 162 HOH HOH A . M 4 HOH 71 375 163 HOH HOH A . M 4 HOH 72 376 164 HOH HOH A . M 4 HOH 73 377 169 HOH HOH A . M 4 HOH 74 378 171 HOH HOH A . M 4 HOH 75 379 173 HOH HOH A . M 4 HOH 76 380 178 HOH HOH A . M 4 HOH 77 381 180 HOH HOH A . M 4 HOH 78 382 181 HOH HOH A . M 4 HOH 79 383 182 HOH HOH A . M 4 HOH 80 384 183 HOH HOH A . M 4 HOH 81 385 184 HOH HOH A . M 4 HOH 82 386 185 HOH HOH A . M 4 HOH 83 387 186 HOH HOH A . M 4 HOH 84 388 188 HOH HOH A . M 4 HOH 85 389 191 HOH HOH A . M 4 HOH 86 390 194 HOH HOH A . M 4 HOH 87 391 195 HOH HOH A . M 4 HOH 88 392 196 HOH HOH A . M 4 HOH 89 393 197 HOH HOH A . M 4 HOH 90 394 198 HOH HOH A . M 4 HOH 91 395 200 HOH HOH A . M 4 HOH 92 396 203 HOH HOH A . M 4 HOH 93 397 206 HOH HOH A . M 4 HOH 94 398 207 HOH HOH A . M 4 HOH 95 399 211 HOH HOH A . M 4 HOH 96 400 213 HOH HOH A . M 4 HOH 97 401 215 HOH HOH A . M 4 HOH 98 402 216 HOH HOH A . M 4 HOH 99 403 217 HOH HOH A . M 4 HOH 100 404 219 HOH HOH A . M 4 HOH 101 405 220 HOH HOH A . M 4 HOH 102 406 221 HOH HOH A . M 4 HOH 103 407 225 HOH HOH A . M 4 HOH 104 408 226 HOH HOH A . M 4 HOH 105 409 227 HOH HOH A . M 4 HOH 106 410 228 HOH HOH A . M 4 HOH 107 411 230 HOH HOH A . M 4 HOH 108 412 231 HOH HOH A . M 4 HOH 109 413 232 HOH HOH A . M 4 HOH 110 414 233 HOH HOH A . M 4 HOH 111 415 234 HOH HOH A . M 4 HOH 112 416 237 HOH HOH A . N 4 HOH 1 305 9 HOH HOH B . N 4 HOH 2 306 10 HOH HOH B . N 4 HOH 3 307 11 HOH HOH B . N 4 HOH 4 308 12 HOH HOH B . N 4 HOH 5 309 13 HOH HOH B . N 4 HOH 6 310 14 HOH HOH B . N 4 HOH 7 311 15 HOH HOH B . N 4 HOH 8 312 16 HOH HOH B . N 4 HOH 9 313 17 HOH HOH B . N 4 HOH 10 314 18 HOH HOH B . N 4 HOH 11 315 19 HOH HOH B . N 4 HOH 12 316 20 HOH HOH B . N 4 HOH 13 317 21 HOH HOH B . N 4 HOH 14 318 22 HOH HOH B . N 4 HOH 15 319 23 HOH HOH B . N 4 HOH 16 320 28 HOH HOH B . N 4 HOH 17 321 29 HOH HOH B . N 4 HOH 18 322 30 HOH HOH B . N 4 HOH 19 323 32 HOH HOH B . N 4 HOH 20 324 36 HOH HOH B . N 4 HOH 21 325 38 HOH HOH B . N 4 HOH 22 326 40 HOH HOH B . N 4 HOH 23 327 41 HOH HOH B . N 4 HOH 24 328 43 HOH HOH B . N 4 HOH 25 329 44 HOH HOH B . N 4 HOH 26 330 46 HOH HOH B . N 4 HOH 27 331 47 HOH HOH B . N 4 HOH 28 332 48 HOH HOH B . N 4 HOH 29 333 52 HOH HOH B . N 4 HOH 30 334 53 HOH HOH B . N 4 HOH 31 335 54 HOH HOH B . N 4 HOH 32 336 59 HOH HOH B . N 4 HOH 33 337 64 HOH HOH B . N 4 HOH 34 338 68 HOH HOH B . N 4 HOH 35 339 70 HOH HOH B . N 4 HOH 36 340 73 HOH HOH B . N 4 HOH 37 341 74 HOH HOH B . N 4 HOH 38 342 75 HOH HOH B . N 4 HOH 39 343 76 HOH HOH B . N 4 HOH 40 344 79 HOH HOH B . N 4 HOH 41 345 81 HOH HOH B . N 4 HOH 42 346 82 HOH HOH B . N 4 HOH 43 347 83 HOH HOH B . N 4 HOH 44 348 84 HOH HOH B . N 4 HOH 45 349 85 HOH HOH B . N 4 HOH 46 350 91 HOH HOH B . N 4 HOH 47 351 92 HOH HOH B . N 4 HOH 48 352 96 HOH HOH B . N 4 HOH 49 353 98 HOH HOH B . N 4 HOH 50 354 99 HOH HOH B . N 4 HOH 51 355 101 HOH HOH B . N 4 HOH 52 356 102 HOH HOH B . N 4 HOH 53 357 104 HOH HOH B . N 4 HOH 54 358 105 HOH HOH B . N 4 HOH 55 359 108 HOH HOH B . N 4 HOH 56 360 109 HOH HOH B . N 4 HOH 57 361 111 HOH HOH B . N 4 HOH 58 362 114 HOH HOH B . N 4 HOH 59 363 117 HOH HOH B . N 4 HOH 60 364 118 HOH HOH B . N 4 HOH 61 365 123 HOH HOH B . N 4 HOH 62 366 125 HOH HOH B . N 4 HOH 63 367 126 HOH HOH B . N 4 HOH 64 368 127 HOH HOH B . N 4 HOH 65 369 128 HOH HOH B . N 4 HOH 66 370 129 HOH HOH B . N 4 HOH 67 371 131 HOH HOH B . N 4 HOH 68 372 135 HOH HOH B . N 4 HOH 69 373 136 HOH HOH B . N 4 HOH 70 374 138 HOH HOH B . N 4 HOH 71 375 140 HOH HOH B . N 4 HOH 72 376 143 HOH HOH B . N 4 HOH 73 377 145 HOH HOH B . N 4 HOH 74 378 146 HOH HOH B . N 4 HOH 75 379 147 HOH HOH B . N 4 HOH 76 380 148 HOH HOH B . N 4 HOH 77 381 149 HOH HOH B . N 4 HOH 78 382 151 HOH HOH B . N 4 HOH 79 383 153 HOH HOH B . N 4 HOH 80 384 154 HOH HOH B . N 4 HOH 81 385 155 HOH HOH B . N 4 HOH 82 386 156 HOH HOH B . N 4 HOH 83 387 157 HOH HOH B . N 4 HOH 84 388 158 HOH HOH B . N 4 HOH 85 389 165 HOH HOH B . N 4 HOH 86 390 166 HOH HOH B . N 4 HOH 87 391 167 HOH HOH B . N 4 HOH 88 392 168 HOH HOH B . N 4 HOH 89 393 170 HOH HOH B . N 4 HOH 90 394 172 HOH HOH B . N 4 HOH 91 395 174 HOH HOH B . N 4 HOH 92 396 175 HOH HOH B . N 4 HOH 93 397 176 HOH HOH B . N 4 HOH 94 398 177 HOH HOH B . N 4 HOH 95 399 179 HOH HOH B . N 4 HOH 96 400 187 HOH HOH B . N 4 HOH 97 401 189 HOH HOH B . N 4 HOH 98 402 190 HOH HOH B . N 4 HOH 99 403 192 HOH HOH B . N 4 HOH 100 404 193 HOH HOH B . N 4 HOH 101 405 199 HOH HOH B . N 4 HOH 102 406 201 HOH HOH B . N 4 HOH 103 407 202 HOH HOH B . N 4 HOH 104 408 204 HOH HOH B . N 4 HOH 105 409 205 HOH HOH B . N 4 HOH 106 410 208 HOH HOH B . N 4 HOH 107 411 209 HOH HOH B . N 4 HOH 108 412 210 HOH HOH B . N 4 HOH 109 413 212 HOH HOH B . N 4 HOH 110 414 214 HOH HOH B . N 4 HOH 111 415 218 HOH HOH B . N 4 HOH 112 416 222 HOH HOH B . N 4 HOH 113 417 223 HOH HOH B . N 4 HOH 114 418 224 HOH HOH B . N 4 HOH 115 419 229 HOH HOH B . N 4 HOH 116 420 235 HOH HOH B . N 4 HOH 117 421 236 HOH HOH B . N 4 HOH 118 422 238 HOH HOH B . N 4 HOH 119 423 239 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 40 A MSE 39 ? MET SELENOMETHIONINE 3 A MSE 86 A MSE 85 ? MET SELENOMETHIONINE 4 B MSE 2 B MSE 1 ? MET SELENOMETHIONINE 5 B MSE 40 B MSE 39 ? MET SELENOMETHIONINE 6 B MSE 86 B MSE 85 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 13120 ? 1 MORE -83 ? 1 'SSA (A^2)' 21260 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_556 y,x,-z+1 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 74.7460000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 59 ? A HIS 58 ? 1_555 NI ? C NI . ? A NI 300 ? 1_555 NE2 ? A HIS 61 ? A HIS 60 ? 1_555 94.7 ? 2 NE2 ? A HIS 59 ? A HIS 58 ? 1_555 NI ? C NI . ? A NI 300 ? 1_555 NE2 ? A HIS 101 ? A HIS 100 ? 1_555 87.4 ? 3 NE2 ? A HIS 61 ? A HIS 60 ? 1_555 NI ? C NI . ? A NI 300 ? 1_555 NE2 ? A HIS 101 ? A HIS 100 ? 1_555 96.1 ? 4 NE2 ? A HIS 59 ? A HIS 58 ? 1_555 NI ? C NI . ? A NI 300 ? 1_555 O ? M HOH . ? A HOH 340 ? 1_555 89.7 ? 5 NE2 ? A HIS 61 ? A HIS 60 ? 1_555 NI ? C NI . ? A NI 300 ? 1_555 O ? M HOH . ? A HOH 340 ? 1_555 90.7 ? 6 NE2 ? A HIS 101 ? A HIS 100 ? 1_555 NI ? C NI . ? A NI 300 ? 1_555 O ? M HOH . ? A HOH 340 ? 1_555 172.8 ? 7 NE2 ? A HIS 59 ? A HIS 58 ? 1_555 NI ? C NI . ? A NI 300 ? 1_555 O ? M HOH . ? A HOH 346 ? 1_555 91.6 ? 8 NE2 ? A HIS 61 ? A HIS 60 ? 1_555 NI ? C NI . ? A NI 300 ? 1_555 O ? M HOH . ? A HOH 346 ? 1_555 171.6 ? 9 NE2 ? A HIS 101 ? A HIS 100 ? 1_555 NI ? C NI . ? A NI 300 ? 1_555 O ? M HOH . ? A HOH 346 ? 1_555 89.7 ? 10 O ? M HOH . ? A HOH 340 ? 1_555 NI ? C NI . ? A NI 300 ? 1_555 O ? M HOH . ? A HOH 346 ? 1_555 83.8 ? 11 NE2 ? A HIS 59 ? A HIS 58 ? 1_555 NI ? C NI . ? A NI 300 ? 1_555 O ? M HOH . ? A HOH 377 ? 1_555 178.7 ? 12 NE2 ? A HIS 61 ? A HIS 60 ? 1_555 NI ? C NI . ? A NI 300 ? 1_555 O ? M HOH . ? A HOH 377 ? 1_555 86.2 ? 13 NE2 ? A HIS 101 ? A HIS 100 ? 1_555 NI ? C NI . ? A NI 300 ? 1_555 O ? M HOH . ? A HOH 377 ? 1_555 91.6 ? 14 O ? M HOH . ? A HOH 340 ? 1_555 NI ? C NI . ? A NI 300 ? 1_555 O ? M HOH . ? A HOH 377 ? 1_555 91.2 ? 15 O ? M HOH . ? A HOH 346 ? 1_555 NI ? C NI . ? A NI 300 ? 1_555 O ? M HOH . ? A HOH 377 ? 1_555 87.6 ? 16 NE2 ? B HIS 59 ? B HIS 58 ? 1_555 NI ? H NI . ? B NI 300 ? 1_555 NE2 ? B HIS 61 ? B HIS 60 ? 1_555 96.1 ? 17 NE2 ? B HIS 59 ? B HIS 58 ? 1_555 NI ? H NI . ? B NI 300 ? 1_555 NE2 ? B HIS 101 ? B HIS 100 ? 1_555 87.7 ? 18 NE2 ? B HIS 61 ? B HIS 60 ? 1_555 NI ? H NI . ? B NI 300 ? 1_555 NE2 ? B HIS 101 ? B HIS 100 ? 1_555 96.5 ? 19 NE2 ? B HIS 59 ? B HIS 58 ? 1_555 NI ? H NI . ? B NI 300 ? 1_555 O ? N HOH . ? B HOH 362 ? 1_555 89.3 ? 20 NE2 ? B HIS 61 ? B HIS 60 ? 1_555 NI ? H NI . ? B NI 300 ? 1_555 O ? N HOH . ? B HOH 362 ? 1_555 89.1 ? 21 NE2 ? B HIS 101 ? B HIS 100 ? 1_555 NI ? H NI . ? B NI 300 ? 1_555 O ? N HOH . ? B HOH 362 ? 1_555 173.9 ? 22 NE2 ? B HIS 59 ? B HIS 58 ? 1_555 NI ? H NI . ? B NI 300 ? 1_555 O ? N HOH . ? B HOH 393 ? 1_555 177.8 ? 23 NE2 ? B HIS 61 ? B HIS 60 ? 1_555 NI ? H NI . ? B NI 300 ? 1_555 O ? N HOH . ? B HOH 393 ? 1_555 86.0 ? 24 NE2 ? B HIS 101 ? B HIS 100 ? 1_555 NI ? H NI . ? B NI 300 ? 1_555 O ? N HOH . ? B HOH 393 ? 1_555 91.5 ? 25 O ? N HOH . ? B HOH 362 ? 1_555 NI ? H NI . ? B NI 300 ? 1_555 O ? N HOH . ? B HOH 393 ? 1_555 91.4 ? 26 NE2 ? B HIS 59 ? B HIS 58 ? 1_555 NI ? H NI . ? B NI 300 ? 1_555 O ? N HOH . ? B HOH 413 ? 1_555 90.9 ? 27 NE2 ? B HIS 61 ? B HIS 60 ? 1_555 NI ? H NI . ? B NI 300 ? 1_555 O ? N HOH . ? B HOH 413 ? 1_555 170.4 ? 28 NE2 ? B HIS 101 ? B HIS 100 ? 1_555 NI ? H NI . ? B NI 300 ? 1_555 O ? N HOH . ? B HOH 413 ? 1_555 90.4 ? 29 O ? N HOH . ? B HOH 362 ? 1_555 NI ? H NI . ? B NI 300 ? 1_555 O ? N HOH . ? B HOH 413 ? 1_555 84.3 ? 30 O ? N HOH . ? B HOH 393 ? 1_555 NI ? H NI . ? B NI 300 ? 1_555 O ? N HOH . ? B HOH 413 ? 1_555 87.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-12-26 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2017-10-25 6 'Structure model' 1 5 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Source and taxonomy' 5 3 'Structure model' 'Version format compliance' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Author supporting evidence' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' pdbx_struct_assembly_auth_evidence 3 6 'Structure model' database_2 4 6 'Structure model' pdbx_struct_conn_angle 5 6 'Structure model' struct_conn 6 6 'Structure model' struct_ref_seq_dif 7 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 6 'Structure model' '_pdbx_struct_conn_angle.value' 18 6 'Structure model' '_struct_conn.conn_type_id' 19 6 'Structure model' '_struct_conn.id' 20 6 'Structure model' '_struct_conn.pdbx_dist_value' 21 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 22 6 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 23 6 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 24 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 25 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 32 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 38 6 'Structure model' '_struct_ref_seq_dif.details' 39 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 40 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 41 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 34.6380 19.8428 23.6197 -0.0417 -0.0378 -0.0431 0.0007 0.0366 0.0026 1.8629 1.2727 1.3598 0.2744 -0.9599 -0.2704 -0.0071 0.0188 -0.0117 0.1220 0.0451 -0.1713 -0.1551 -0.0548 0.0596 'X-RAY DIFFRACTION' 2 ? refined 32.0135 7.4884 40.5619 -0.0496 -0.0396 -0.0395 0.0409 -0.0009 0.0255 1.2046 2.0120 1.2570 0.3174 -0.3619 -0.2264 -0.0521 0.0268 0.0253 -0.1354 -0.1365 -0.1265 0.0670 0.1877 0.1167 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 1 A 129 ALL A 0 A 128 'X-RAY DIFFRACTION' ? 2 2 B 2 B 128 ALL B 1 B 127 'X-RAY DIFFRACTION' ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 1 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 2 REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 SCALA . ? other 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/INDEX.html Fortran_77 ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 6 CCP4 '(SCALA)' ? ? ? ? 'data scaling' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 SOLVE . ? ? ? ? phasing ? ? ? 9 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 300 ;BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 2 CHAIN(S). SEE REMARK 350 FOR INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A TETRAMER AS A BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE. ; 999 ;SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A LYS 12 ? ? CA A LYS 12 ? ? C A LYS 12 ? ? 132.53 111.00 21.53 2.70 N 2 1 N A GLY 63 ? ? CA A GLY 63 ? ? C A GLY 63 ? ? 96.14 113.10 -16.96 2.50 N 3 1 CB B MSE 1 ? ? CG B MSE 1 ? ? SE B MSE 1 ? ? 130.85 112.70 18.15 3.00 N 4 1 N B GLY 63 ? ? CA B GLY 63 ? ? C B GLY 63 ? ? 96.72 113.10 -16.38 2.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 13 ? A 75.66 -73.68 2 1 ASP A 13 ? B 76.93 -65.30 3 1 SER A 15 ? ? -72.81 -169.08 4 1 LYS B 2 ? ? 174.27 136.46 5 1 ALA B 53 ? ? 174.00 164.25 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 LYS A 12 ? ? ASP A 13 ? A 43.39 2 1 LYS A 12 ? ? ASP A 13 ? B 39.73 3 1 MSE B 1 ? ? LYS B 2 ? ? 124.47 4 1 ALA B 53 ? ? LYS B 54 ? ? -70.58 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 2 ? CD ? A LYS 3 CD 2 1 Y 1 A LYS 2 ? CE ? A LYS 3 CE 3 1 Y 1 A LYS 2 ? NZ ? A LYS 3 NZ 4 1 Y 1 A GLN 4 ? CD ? A GLN 5 CD 5 1 Y 1 A GLN 4 ? OE1 ? A GLN 5 OE1 6 1 Y 1 A GLN 4 ? NE2 ? A GLN 5 NE2 7 1 Y 1 A PHE 24 ? CG ? A PHE 25 CG 8 1 Y 1 A PHE 24 ? CD1 ? A PHE 25 CD1 9 1 Y 1 A PHE 24 ? CD2 ? A PHE 25 CD2 10 1 Y 1 A PHE 24 ? CE1 ? A PHE 25 CE1 11 1 Y 1 A PHE 24 ? CE2 ? A PHE 25 CE2 12 1 Y 1 A PHE 24 ? CZ ? A PHE 25 CZ 13 1 Y 1 A ASP 126 ? CG ? A ASP 127 CG 14 1 Y 1 A ASP 126 ? OD1 ? A ASP 127 OD1 15 1 Y 1 A ASP 126 ? OD2 ? A ASP 127 OD2 16 1 Y 1 A LEU 127 ? CG ? A LEU 128 CG 17 1 Y 1 A LEU 127 ? CD1 ? A LEU 128 CD1 18 1 Y 1 A LEU 127 ? CD2 ? A LEU 128 CD2 19 1 Y 1 B LYS 12 ? CD ? B LYS 13 CD 20 1 Y 1 B LYS 12 ? CE ? B LYS 13 CE 21 1 Y 1 B LYS 12 ? NZ ? B LYS 13 NZ 22 1 Y 1 B ARG 19 ? CG ? B ARG 20 CG 23 1 Y 1 B ARG 19 ? CD ? B ARG 20 CD 24 1 Y 1 B ARG 19 ? NE ? B ARG 20 NE 25 1 Y 1 B ARG 19 ? CZ ? B ARG 20 CZ 26 1 Y 1 B ARG 19 ? NH1 ? B ARG 20 NH1 27 1 Y 1 B ARG 19 ? NH2 ? B ARG 20 NH2 28 1 Y 1 B GLU 52 ? CG ? B GLU 53 CG 29 1 Y 1 B GLU 52 ? CD ? B GLU 53 CD 30 1 Y 1 B GLU 52 ? OE1 ? B GLU 53 OE1 31 1 Y 1 B GLU 52 ? OE2 ? B GLU 53 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 20 ? A GLY 21 2 1 Y 1 A LEU 21 ? A LEU 22 3 1 Y 1 A GLY 50 ? A GLY 51 4 1 Y 1 A LYS 51 ? A LYS 52 5 1 Y 1 A GLU 52 ? A GLU 53 6 1 Y 1 A ALA 53 ? A ALA 54 7 1 Y 1 A LYS 54 ? A LYS 55 8 1 Y 1 A GLU 129 ? A GLU 130 9 1 Y 1 A ALA 130 ? A ALA 131 10 1 Y 1 A ARG 131 ? A ARG 132 11 1 Y 1 A LYS 132 ? A LYS 133 12 1 Y 1 A PRO 133 ? A PRO 134 13 1 Y 1 B GLY 0 ? B GLY 1 14 1 Y 1 B GLY 20 ? B GLY 21 15 1 Y 1 B LEU 21 ? B LEU 22 16 1 Y 1 B ARG 22 ? B ARG 23 17 1 Y 1 B GLY 50 ? B GLY 51 18 1 Y 1 B LYS 51 ? B LYS 52 19 1 Y 1 B GLU 128 ? B GLU 129 20 1 Y 1 B GLU 129 ? B GLU 130 21 1 Y 1 B ALA 130 ? B ALA 131 22 1 Y 1 B ARG 131 ? B ARG 132 23 1 Y 1 B LYS 132 ? B LYS 133 24 1 Y 1 B PRO 133 ? B PRO 134 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NICKEL (II) ION' NI 3 1,2-ETHANEDIOL EDO 4 water HOH # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' ? 2 1 'light scattering' ? #