data_2OBS # _entry.id 2OBS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2OBS pdb_00002obs 10.2210/pdb2obs/pdb RCSB RCSB040937 ? ? WWPDB D_1000040937 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2OBR . unspecified PDB 2OBT . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2OBS _pdbx_database_status.recvd_initial_deposition_date 2006-12-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cao, S.' 1 'Li, X.' 2 'Rao, Z.' 3 # _citation.id primary _citation.title 'Structural Basis for the Recognition of Blood Group Trisaccharides by Norovirus' _citation.journal_abbrev J.Virol. _citation.journal_volume 81 _citation.page_first 5949 _citation.page_last 5957 _citation.year 2007 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17392366 _citation.pdbx_database_id_DOI 10.1128/JVI.00219-07 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cao, S.' 1 ? primary 'Lou, Z.' 2 ? primary 'Tan, M.' 3 ? primary 'Chen, Y.' 4 ? primary 'Liu, Y.' 5 ? primary 'Zhang, Z.' 6 ? primary 'Zhang, X.C.' 7 ? primary 'Jiang, X.' 8 ? primary 'Li, X.' 9 ? primary 'Rao, Z.' 10 ? # _cell.entry_id 2OBS _cell.length_a 55.609 _cell.length_b 96.495 _cell.length_c 118.438 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2OBS _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Capsid protein' 35982.207 1 ? T355S,F375L 'P Domain' ? 2 branched man 'alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-gulopyranose' 529.490 1 ? ? ? ? 3 water nat water 18.015 209 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GFLVPPTVESRTKPFTVPILTVEEMSNSRFPIPLEKLYTGPSSAFVVQPQNGRCTTDGVLLGTTQLSAVNICTFRGDVTH IAGSHDYIMNLASQNWNNYDPTEEIPAPLGTPDFVGKIQGMLTQTTREDGSTRAHKATVSTGSVHFTPKLGSVQYTTDTN NDLQTGQNTKFTPVGVIQDGNNHQNEPQQWVLPNYSGRTGHNVHLAPAVAPTFPGEQLLFFRSTMPGCSGYPNMNLDCLL PQEWVQHFYQEAAPAQSDVALLRFVNPDTGRVLFECKLHKSGYVTVAHTGPHDLVIPPNGYFRFDSWVNQFYTLAPMGNG AGRRRAL ; _entity_poly.pdbx_seq_one_letter_code_can ;GFLVPPTVESRTKPFTVPILTVEEMSNSRFPIPLEKLYTGPSSAFVVQPQNGRCTTDGVLLGTTQLSAVNICTFRGDVTH IAGSHDYIMNLASQNWNNYDPTEEIPAPLGTPDFVGKIQGMLTQTTREDGSTRAHKATVSTGSVHFTPKLGSVQYTTDTN NDLQTGQNTKFTPVGVIQDGNNHQNEPQQWVLPNYSGRTGHNVHLAPAVAPTFPGEQLLFFRSTMPGCSGYPNMNLDCLL PQEWVQHFYQEAAPAQSDVALLRFVNPDTGRVLFECKLHKSGYVTVAHTGPHDLVIPPNGYFRFDSWVNQFYTLAPMGNG AGRRRAL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PHE n 1 3 LEU n 1 4 VAL n 1 5 PRO n 1 6 PRO n 1 7 THR n 1 8 VAL n 1 9 GLU n 1 10 SER n 1 11 ARG n 1 12 THR n 1 13 LYS n 1 14 PRO n 1 15 PHE n 1 16 THR n 1 17 VAL n 1 18 PRO n 1 19 ILE n 1 20 LEU n 1 21 THR n 1 22 VAL n 1 23 GLU n 1 24 GLU n 1 25 MET n 1 26 SER n 1 27 ASN n 1 28 SER n 1 29 ARG n 1 30 PHE n 1 31 PRO n 1 32 ILE n 1 33 PRO n 1 34 LEU n 1 35 GLU n 1 36 LYS n 1 37 LEU n 1 38 TYR n 1 39 THR n 1 40 GLY n 1 41 PRO n 1 42 SER n 1 43 SER n 1 44 ALA n 1 45 PHE n 1 46 VAL n 1 47 VAL n 1 48 GLN n 1 49 PRO n 1 50 GLN n 1 51 ASN n 1 52 GLY n 1 53 ARG n 1 54 CYS n 1 55 THR n 1 56 THR n 1 57 ASP n 1 58 GLY n 1 59 VAL n 1 60 LEU n 1 61 LEU n 1 62 GLY n 1 63 THR n 1 64 THR n 1 65 GLN n 1 66 LEU n 1 67 SER n 1 68 ALA n 1 69 VAL n 1 70 ASN n 1 71 ILE n 1 72 CYS n 1 73 THR n 1 74 PHE n 1 75 ARG n 1 76 GLY n 1 77 ASP n 1 78 VAL n 1 79 THR n 1 80 HIS n 1 81 ILE n 1 82 ALA n 1 83 GLY n 1 84 SER n 1 85 HIS n 1 86 ASP n 1 87 TYR n 1 88 ILE n 1 89 MET n 1 90 ASN n 1 91 LEU n 1 92 ALA n 1 93 SER n 1 94 GLN n 1 95 ASN n 1 96 TRP n 1 97 ASN n 1 98 ASN n 1 99 TYR n 1 100 ASP n 1 101 PRO n 1 102 THR n 1 103 GLU n 1 104 GLU n 1 105 ILE n 1 106 PRO n 1 107 ALA n 1 108 PRO n 1 109 LEU n 1 110 GLY n 1 111 THR n 1 112 PRO n 1 113 ASP n 1 114 PHE n 1 115 VAL n 1 116 GLY n 1 117 LYS n 1 118 ILE n 1 119 GLN n 1 120 GLY n 1 121 MET n 1 122 LEU n 1 123 THR n 1 124 GLN n 1 125 THR n 1 126 THR n 1 127 ARG n 1 128 GLU n 1 129 ASP n 1 130 GLY n 1 131 SER n 1 132 THR n 1 133 ARG n 1 134 ALA n 1 135 HIS n 1 136 LYS n 1 137 ALA n 1 138 THR n 1 139 VAL n 1 140 SER n 1 141 THR n 1 142 GLY n 1 143 SER n 1 144 VAL n 1 145 HIS n 1 146 PHE n 1 147 THR n 1 148 PRO n 1 149 LYS n 1 150 LEU n 1 151 GLY n 1 152 SER n 1 153 VAL n 1 154 GLN n 1 155 TYR n 1 156 THR n 1 157 THR n 1 158 ASP n 1 159 THR n 1 160 ASN n 1 161 ASN n 1 162 ASP n 1 163 LEU n 1 164 GLN n 1 165 THR n 1 166 GLY n 1 167 GLN n 1 168 ASN n 1 169 THR n 1 170 LYS n 1 171 PHE n 1 172 THR n 1 173 PRO n 1 174 VAL n 1 175 GLY n 1 176 VAL n 1 177 ILE n 1 178 GLN n 1 179 ASP n 1 180 GLY n 1 181 ASN n 1 182 ASN n 1 183 HIS n 1 184 GLN n 1 185 ASN n 1 186 GLU n 1 187 PRO n 1 188 GLN n 1 189 GLN n 1 190 TRP n 1 191 VAL n 1 192 LEU n 1 193 PRO n 1 194 ASN n 1 195 TYR n 1 196 SER n 1 197 GLY n 1 198 ARG n 1 199 THR n 1 200 GLY n 1 201 HIS n 1 202 ASN n 1 203 VAL n 1 204 HIS n 1 205 LEU n 1 206 ALA n 1 207 PRO n 1 208 ALA n 1 209 VAL n 1 210 ALA n 1 211 PRO n 1 212 THR n 1 213 PHE n 1 214 PRO n 1 215 GLY n 1 216 GLU n 1 217 GLN n 1 218 LEU n 1 219 LEU n 1 220 PHE n 1 221 PHE n 1 222 ARG n 1 223 SER n 1 224 THR n 1 225 MET n 1 226 PRO n 1 227 GLY n 1 228 CYS n 1 229 SER n 1 230 GLY n 1 231 TYR n 1 232 PRO n 1 233 ASN n 1 234 MET n 1 235 ASN n 1 236 LEU n 1 237 ASP n 1 238 CYS n 1 239 LEU n 1 240 LEU n 1 241 PRO n 1 242 GLN n 1 243 GLU n 1 244 TRP n 1 245 VAL n 1 246 GLN n 1 247 HIS n 1 248 PHE n 1 249 TYR n 1 250 GLN n 1 251 GLU n 1 252 ALA n 1 253 ALA n 1 254 PRO n 1 255 ALA n 1 256 GLN n 1 257 SER n 1 258 ASP n 1 259 VAL n 1 260 ALA n 1 261 LEU n 1 262 LEU n 1 263 ARG n 1 264 PHE n 1 265 VAL n 1 266 ASN n 1 267 PRO n 1 268 ASP n 1 269 THR n 1 270 GLY n 1 271 ARG n 1 272 VAL n 1 273 LEU n 1 274 PHE n 1 275 GLU n 1 276 CYS n 1 277 LYS n 1 278 LEU n 1 279 HIS n 1 280 LYS n 1 281 SER n 1 282 GLY n 1 283 TYR n 1 284 VAL n 1 285 THR n 1 286 VAL n 1 287 ALA n 1 288 HIS n 1 289 THR n 1 290 GLY n 1 291 PRO n 1 292 HIS n 1 293 ASP n 1 294 LEU n 1 295 VAL n 1 296 ILE n 1 297 PRO n 1 298 PRO n 1 299 ASN n 1 300 GLY n 1 301 TYR n 1 302 PHE n 1 303 ARG n 1 304 PHE n 1 305 ASP n 1 306 SER n 1 307 TRP n 1 308 VAL n 1 309 ASN n 1 310 GLN n 1 311 PHE n 1 312 TYR n 1 313 THR n 1 314 LEU n 1 315 ALA n 1 316 PRO n 1 317 MET n 1 318 GLY n 1 319 ASN n 1 320 GLY n 1 321 ALA n 1 322 GLY n 1 323 ARG n 1 324 ARG n 1 325 ARG n 1 326 ALA n 1 327 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Norovirus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain VA387 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name Norovirus _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 142786 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pgex-4t-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q913Z3_9CALI _struct_ref.pdbx_db_accession Q913Z3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;FLVPPTVESRTKPFTVPILTVEEMSNSRFPIPLEKLYTGPSSAFVVQPQNGRCTTDGVLLGTTQLSAVNICTFRGDVTHI AGSHDYIMNLASQNWNNYDPTEEIPAPLGTPDFVGKIQGMLTQTTREDGSTRAHKATVSTGTVHFTPKLGSVQYTTDTNN DFQTGQNTKFTPVGVIQDGNNHQNEPQQWVLPNYSGRTGHNVHLAPAVAPTFPGEQLLFFRSTMPGCSGYPNMNLDCLLP QEWVQHFYQEAAPAQSDVALLRFVNPDTGRVLFECKLHKSGYVTVAHTGPHDLVIPPNGYFRFDSWVNQFYTLAPMGNGA GRRRAL ; _struct_ref.pdbx_align_begin 214 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2OBS _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 327 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q913Z3 _struct_ref_seq.db_align_beg 214 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 539 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 214 _struct_ref_seq.pdbx_auth_seq_align_end 539 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2OBS GLY A 1 ? UNP Q913Z3 ? ? 'expression tag' 213 1 1 2OBS SER A 143 ? UNP Q913Z3 THR 355 'engineered mutation' 355 2 1 2OBS LEU A 163 ? UNP Q913Z3 PHE 375 'engineered mutation' 375 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A2G 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-galactopyranose ;N-acetyl-alpha-D-galactosamine; 2-acetamido-2-deoxy-alpha-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE ; 'C8 H15 N O6' 221.208 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GL0 'D-saccharide, beta linking' . beta-D-gulopyranose 'beta-D-gulose; D-gulose; gulose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2OBS _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.21 _exptl_crystal.density_percent_sol 44.24 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details '0.2M MgAc, 8% PEG3350, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2006-08-10 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'osmic mirror' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 2OBS _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.0 _reflns.d_resolution_low 50.0 _reflns.number_all 20565 _reflns.number_obs 19840 _reflns.percent_possible_obs 96 _reflns.pdbx_Rmerge_I_obs 0.074 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.1 _reflns_shell.percent_possible_all 95 _reflns_shell.Rmerge_I_obs 0.567 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.8 _reflns_shell.pdbx_redundancy 2.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1529 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2OBS _refine.ls_d_res_high 2.0 _refine.ls_d_res_low 50.0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 21955 _refine.ls_number_reflns_obs 19834 _refine.ls_number_reflns_R_free 970 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all 0.224 _refine.ls_R_factor_obs 0.219 _refine.ls_R_factor_R_work 0.214 _refine.ls_R_factor_R_free 0.264 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2OBR _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2384 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 209 _refine_hist.number_atoms_total 2629 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_angle_deg 0.008 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d 1.494 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 2OBS _struct.title 'Crystal Structures of P Domain of Norovirus VA387 in Complex with Blood Group Trisaccharides type A' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2OBS _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'Crystal Structures, P Domain, Norovirus VA387, Blood Group Trisaccharides type A, VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 21 ? MET A 25 ? THR A 233 MET A 237 5 ? 5 HELX_P HELX_P2 2 SER A 196 ? GLY A 200 ? SER A 408 GLY A 412 5 ? 5 HELX_P HELX_P3 3 PRO A 241 ? ALA A 252 ? PRO A 453 ALA A 464 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B GL0 . O2 ? ? ? 1_555 B FUC . C1 ? ? B GL0 1 B FUC 2 1_555 ? ? ? ? ? ? ? 1.495 sing ? covale2 covale both ? B GL0 . O3 ? ? ? 1_555 B A2G . C1 ? ? B GL0 1 B A2G 3 1_555 ? ? ? ? ? ? ? 1.419 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 186 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 398 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 187 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 399 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.16 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? C ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASN A 235 ? CYS A 238 ? ASN A 447 CYS A 450 A 2 GLU A 216 ? THR A 224 ? GLU A 428 THR A 436 A 3 LYS A 36 ? THR A 39 ? LYS A 248 THR A 251 A 4 HIS A 292 ? ASP A 293 ? HIS A 504 ASP A 505 B 1 ASN A 235 ? CYS A 238 ? ASN A 447 CYS A 450 B 2 GLU A 216 ? THR A 224 ? GLU A 428 THR A 436 B 3 TYR A 283 ? ALA A 287 ? TYR A 495 ALA A 499 B 4 VAL A 272 ? HIS A 279 ? VAL A 484 HIS A 491 B 5 VAL A 259 ? VAL A 265 ? VAL A 471 VAL A 477 B 6 TYR A 301 ? VAL A 308 ? TYR A 513 VAL A 520 C 1 GLY A 227 ? SER A 229 ? GLY A 439 SER A 441 C 2 THR A 169 ? ILE A 177 ? THR A 381 ILE A 389 C 3 LYS A 117 ? THR A 126 ? LYS A 329 THR A 338 C 4 SER A 131 ? SER A 140 ? SER A 343 SER A 352 C 5 SER A 152 ? THR A 157 ? SER A 364 THR A 369 C 6 ASP A 86 ? LEU A 91 ? ASP A 298 LEU A 303 C 7 PHE A 74 ? HIS A 80 ? PHE A 286 HIS A 292 C 8 THR A 169 ? ILE A 177 ? THR A 381 ILE A 389 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O CYS A 238 ? O CYS A 450 N PHE A 221 ? N PHE A 433 A 2 3 O PHE A 220 ? O PHE A 432 N TYR A 38 ? N TYR A 250 A 3 4 N THR A 39 ? N THR A 251 O HIS A 292 ? O HIS A 504 B 1 2 O CYS A 238 ? O CYS A 450 N PHE A 221 ? N PHE A 433 B 2 3 N LEU A 219 ? N LEU A 431 O VAL A 284 ? O VAL A 496 B 3 4 O THR A 285 ? O THR A 497 N LYS A 277 ? N LYS A 489 B 4 5 O LEU A 278 ? O LEU A 490 N ALA A 260 ? N ALA A 472 B 5 6 N LEU A 261 ? N LEU A 473 O SER A 306 ? O SER A 518 C 1 2 O CYS A 228 ? O CYS A 440 N VAL A 176 ? N VAL A 388 C 2 3 O GLY A 175 ? O GLY A 387 N GLN A 119 ? N GLN A 331 C 3 4 N THR A 126 ? N THR A 338 O SER A 131 ? O SER A 343 C 4 5 N THR A 138 ? N THR A 350 O THR A 156 ? O THR A 368 C 5 6 O VAL A 153 ? O VAL A 365 N MET A 89 ? N MET A 301 C 6 7 O ILE A 88 ? O ILE A 300 N THR A 79 ? N THR A 291 C 7 8 N GLY A 76 ? N GLY A 288 O THR A 169 ? O THR A 381 # _database_PDB_matrix.entry_id 2OBS _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2OBS _atom_sites.fract_transf_matrix[1][1] 0.017983 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010363 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008443 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'GL0 B 1 HAS WRONG CHIRALITY AT ATOM C3' 2 'A2G B 3 HAS WRONG CHIRALITY AT ATOM C1' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 213 ? ? ? A . n A 1 2 PHE 2 214 ? ? ? A . n A 1 3 LEU 3 215 ? ? ? A . n A 1 4 VAL 4 216 ? ? ? A . n A 1 5 PRO 5 217 ? ? ? A . n A 1 6 PRO 6 218 ? ? ? A . n A 1 7 THR 7 219 ? ? ? A . n A 1 8 VAL 8 220 ? ? ? A . n A 1 9 GLU 9 221 ? ? ? A . n A 1 10 SER 10 222 ? ? ? A . n A 1 11 ARG 11 223 ? ? ? A . n A 1 12 THR 12 224 224 THR THR A . n A 1 13 LYS 13 225 225 LYS LYS A . n A 1 14 PRO 14 226 226 PRO PRO A . n A 1 15 PHE 15 227 227 PHE PHE A . n A 1 16 THR 16 228 228 THR THR A . n A 1 17 VAL 17 229 229 VAL VAL A . n A 1 18 PRO 18 230 230 PRO PRO A . n A 1 19 ILE 19 231 231 ILE ILE A . n A 1 20 LEU 20 232 232 LEU LEU A . n A 1 21 THR 21 233 233 THR THR A . n A 1 22 VAL 22 234 234 VAL VAL A . n A 1 23 GLU 23 235 235 GLU GLU A . n A 1 24 GLU 24 236 236 GLU GLU A . n A 1 25 MET 25 237 237 MET MET A . n A 1 26 SER 26 238 238 SER SER A . n A 1 27 ASN 27 239 239 ASN ASN A . n A 1 28 SER 28 240 240 SER SER A . n A 1 29 ARG 29 241 241 ARG ARG A . n A 1 30 PHE 30 242 242 PHE PHE A . n A 1 31 PRO 31 243 243 PRO PRO A . n A 1 32 ILE 32 244 244 ILE ILE A . n A 1 33 PRO 33 245 245 PRO PRO A . n A 1 34 LEU 34 246 246 LEU LEU A . n A 1 35 GLU 35 247 247 GLU GLU A . n A 1 36 LYS 36 248 248 LYS LYS A . n A 1 37 LEU 37 249 249 LEU LEU A . n A 1 38 TYR 38 250 250 TYR TYR A . n A 1 39 THR 39 251 251 THR THR A . n A 1 40 GLY 40 252 252 GLY GLY A . n A 1 41 PRO 41 253 253 PRO PRO A . n A 1 42 SER 42 254 254 SER SER A . n A 1 43 SER 43 255 255 SER SER A . n A 1 44 ALA 44 256 256 ALA ALA A . n A 1 45 PHE 45 257 257 PHE PHE A . n A 1 46 VAL 46 258 258 VAL VAL A . n A 1 47 VAL 47 259 259 VAL VAL A . n A 1 48 GLN 48 260 260 GLN GLN A . n A 1 49 PRO 49 261 261 PRO PRO A . n A 1 50 GLN 50 262 262 GLN GLN A . n A 1 51 ASN 51 263 263 ASN ASN A . n A 1 52 GLY 52 264 264 GLY GLY A . n A 1 53 ARG 53 265 265 ARG ARG A . n A 1 54 CYS 54 266 266 CYS CYS A . n A 1 55 THR 55 267 267 THR THR A . n A 1 56 THR 56 268 268 THR THR A . n A 1 57 ASP 57 269 269 ASP ASP A . n A 1 58 GLY 58 270 270 GLY GLY A . n A 1 59 VAL 59 271 271 VAL VAL A . n A 1 60 LEU 60 272 272 LEU LEU A . n A 1 61 LEU 61 273 273 LEU LEU A . n A 1 62 GLY 62 274 274 GLY GLY A . n A 1 63 THR 63 275 275 THR THR A . n A 1 64 THR 64 276 276 THR THR A . n A 1 65 GLN 65 277 277 GLN GLN A . n A 1 66 LEU 66 278 278 LEU LEU A . n A 1 67 SER 67 279 279 SER SER A . n A 1 68 ALA 68 280 280 ALA ALA A . n A 1 69 VAL 69 281 281 VAL VAL A . n A 1 70 ASN 70 282 282 ASN ASN A . n A 1 71 ILE 71 283 283 ILE ILE A . n A 1 72 CYS 72 284 284 CYS CYS A . n A 1 73 THR 73 285 285 THR THR A . n A 1 74 PHE 74 286 286 PHE PHE A . n A 1 75 ARG 75 287 287 ARG ARG A . n A 1 76 GLY 76 288 288 GLY GLY A . n A 1 77 ASP 77 289 289 ASP ASP A . n A 1 78 VAL 78 290 290 VAL VAL A . n A 1 79 THR 79 291 291 THR THR A . n A 1 80 HIS 80 292 292 HIS HIS A . n A 1 81 ILE 81 293 293 ILE ILE A . n A 1 82 ALA 82 294 294 ALA ALA A . n A 1 83 GLY 83 295 295 GLY GLY A . n A 1 84 SER 84 296 296 SER SER A . n A 1 85 HIS 85 297 297 HIS HIS A . n A 1 86 ASP 86 298 298 ASP ASP A . n A 1 87 TYR 87 299 299 TYR TYR A . n A 1 88 ILE 88 300 300 ILE ILE A . n A 1 89 MET 89 301 301 MET MET A . n A 1 90 ASN 90 302 302 ASN ASN A . n A 1 91 LEU 91 303 303 LEU LEU A . n A 1 92 ALA 92 304 304 ALA ALA A . n A 1 93 SER 93 305 305 SER SER A . n A 1 94 GLN 94 306 306 GLN GLN A . n A 1 95 ASN 95 307 307 ASN ASN A . n A 1 96 TRP 96 308 308 TRP TRP A . n A 1 97 ASN 97 309 309 ASN ASN A . n A 1 98 ASN 98 310 310 ASN ASN A . n A 1 99 TYR 99 311 311 TYR TYR A . n A 1 100 ASP 100 312 312 ASP ASP A . n A 1 101 PRO 101 313 313 PRO PRO A . n A 1 102 THR 102 314 314 THR THR A . n A 1 103 GLU 103 315 315 GLU GLU A . n A 1 104 GLU 104 316 316 GLU GLU A . n A 1 105 ILE 105 317 317 ILE ILE A . n A 1 106 PRO 106 318 318 PRO PRO A . n A 1 107 ALA 107 319 319 ALA ALA A . n A 1 108 PRO 108 320 320 PRO PRO A . n A 1 109 LEU 109 321 321 LEU LEU A . n A 1 110 GLY 110 322 322 GLY GLY A . n A 1 111 THR 111 323 323 THR THR A . n A 1 112 PRO 112 324 324 PRO PRO A . n A 1 113 ASP 113 325 325 ASP ASP A . n A 1 114 PHE 114 326 326 PHE PHE A . n A 1 115 VAL 115 327 327 VAL VAL A . n A 1 116 GLY 116 328 328 GLY GLY A . n A 1 117 LYS 117 329 329 LYS LYS A . n A 1 118 ILE 118 330 330 ILE ILE A . n A 1 119 GLN 119 331 331 GLN GLN A . n A 1 120 GLY 120 332 332 GLY GLY A . n A 1 121 MET 121 333 333 MET MET A . n A 1 122 LEU 122 334 334 LEU LEU A . n A 1 123 THR 123 335 335 THR THR A . n A 1 124 GLN 124 336 336 GLN GLN A . n A 1 125 THR 125 337 337 THR THR A . n A 1 126 THR 126 338 338 THR THR A . n A 1 127 ARG 127 339 339 ARG ARG A . n A 1 128 GLU 128 340 340 GLU GLU A . n A 1 129 ASP 129 341 341 ASP ASP A . n A 1 130 GLY 130 342 342 GLY GLY A . n A 1 131 SER 131 343 343 SER SER A . n A 1 132 THR 132 344 344 THR THR A . n A 1 133 ARG 133 345 345 ARG ARG A . n A 1 134 ALA 134 346 346 ALA ALA A . n A 1 135 HIS 135 347 347 HIS HIS A . n A 1 136 LYS 136 348 348 LYS LYS A . n A 1 137 ALA 137 349 349 ALA ALA A . n A 1 138 THR 138 350 350 THR THR A . n A 1 139 VAL 139 351 351 VAL VAL A . n A 1 140 SER 140 352 352 SER SER A . n A 1 141 THR 141 353 353 THR THR A . n A 1 142 GLY 142 354 354 GLY GLY A . n A 1 143 SER 143 355 355 SER SER A . n A 1 144 VAL 144 356 356 VAL VAL A . n A 1 145 HIS 145 357 357 HIS HIS A . n A 1 146 PHE 146 358 358 PHE PHE A . n A 1 147 THR 147 359 359 THR THR A . n A 1 148 PRO 148 360 360 PRO PRO A . n A 1 149 LYS 149 361 361 LYS LYS A . n A 1 150 LEU 150 362 362 LEU LEU A . n A 1 151 GLY 151 363 363 GLY GLY A . n A 1 152 SER 152 364 364 SER SER A . n A 1 153 VAL 153 365 365 VAL VAL A . n A 1 154 GLN 154 366 366 GLN GLN A . n A 1 155 TYR 155 367 367 TYR TYR A . n A 1 156 THR 156 368 368 THR THR A . n A 1 157 THR 157 369 369 THR THR A . n A 1 158 ASP 158 370 370 ASP ASP A . n A 1 159 THR 159 371 371 THR THR A . n A 1 160 ASN 160 372 372 ASN ASN A . n A 1 161 ASN 161 373 373 ASN ASN A . n A 1 162 ASP 162 374 374 ASP ASP A . n A 1 163 LEU 163 375 375 LEU LEU A . n A 1 164 GLN 164 376 376 GLN GLN A . n A 1 165 THR 165 377 377 THR THR A . n A 1 166 GLY 166 378 378 GLY GLY A . n A 1 167 GLN 167 379 379 GLN GLN A . n A 1 168 ASN 168 380 380 ASN ASN A . n A 1 169 THR 169 381 381 THR THR A . n A 1 170 LYS 170 382 382 LYS LYS A . n A 1 171 PHE 171 383 383 PHE PHE A . n A 1 172 THR 172 384 384 THR THR A . n A 1 173 PRO 173 385 385 PRO PRO A . n A 1 174 VAL 174 386 386 VAL VAL A . n A 1 175 GLY 175 387 387 GLY GLY A . n A 1 176 VAL 176 388 388 VAL VAL A . n A 1 177 ILE 177 389 389 ILE ILE A . n A 1 178 GLN 178 390 390 GLN GLN A . n A 1 179 ASP 179 391 391 ASP ASP A . n A 1 180 GLY 180 392 392 GLY GLY A . n A 1 181 ASN 181 393 393 ASN ASN A . n A 1 182 ASN 182 394 394 ASN ASN A . n A 1 183 HIS 183 395 395 HIS HIS A . n A 1 184 GLN 184 396 396 GLN GLN A . n A 1 185 ASN 185 397 397 ASN ASN A . n A 1 186 GLU 186 398 398 GLU GLU A . n A 1 187 PRO 187 399 399 PRO PRO A . n A 1 188 GLN 188 400 400 GLN GLN A . n A 1 189 GLN 189 401 401 GLN GLN A . n A 1 190 TRP 190 402 402 TRP TRP A . n A 1 191 VAL 191 403 403 VAL VAL A . n A 1 192 LEU 192 404 404 LEU LEU A . n A 1 193 PRO 193 405 405 PRO PRO A . n A 1 194 ASN 194 406 406 ASN ASN A . n A 1 195 TYR 195 407 407 TYR TYR A . n A 1 196 SER 196 408 408 SER SER A . n A 1 197 GLY 197 409 409 GLY GLY A . n A 1 198 ARG 198 410 410 ARG ARG A . n A 1 199 THR 199 411 411 THR THR A . n A 1 200 GLY 200 412 412 GLY GLY A . n A 1 201 HIS 201 413 413 HIS HIS A . n A 1 202 ASN 202 414 414 ASN ASN A . n A 1 203 VAL 203 415 415 VAL VAL A . n A 1 204 HIS 204 416 416 HIS HIS A . n A 1 205 LEU 205 417 417 LEU LEU A . n A 1 206 ALA 206 418 418 ALA ALA A . n A 1 207 PRO 207 419 419 PRO PRO A . n A 1 208 ALA 208 420 420 ALA ALA A . n A 1 209 VAL 209 421 421 VAL VAL A . n A 1 210 ALA 210 422 422 ALA ALA A . n A 1 211 PRO 211 423 423 PRO PRO A . n A 1 212 THR 212 424 424 THR THR A . n A 1 213 PHE 213 425 425 PHE PHE A . n A 1 214 PRO 214 426 426 PRO PRO A . n A 1 215 GLY 215 427 427 GLY GLY A . n A 1 216 GLU 216 428 428 GLU GLU A . n A 1 217 GLN 217 429 429 GLN GLN A . n A 1 218 LEU 218 430 430 LEU LEU A . n A 1 219 LEU 219 431 431 LEU LEU A . n A 1 220 PHE 220 432 432 PHE PHE A . n A 1 221 PHE 221 433 433 PHE PHE A . n A 1 222 ARG 222 434 434 ARG ARG A . n A 1 223 SER 223 435 435 SER SER A . n A 1 224 THR 224 436 436 THR THR A . n A 1 225 MET 225 437 437 MET MET A . n A 1 226 PRO 226 438 438 PRO PRO A . n A 1 227 GLY 227 439 439 GLY GLY A . n A 1 228 CYS 228 440 440 CYS CYS A . n A 1 229 SER 229 441 441 SER SER A . n A 1 230 GLY 230 442 442 GLY GLY A . n A 1 231 TYR 231 443 443 TYR TYR A . n A 1 232 PRO 232 444 444 PRO PRO A . n A 1 233 ASN 233 445 445 ASN ASN A . n A 1 234 MET 234 446 446 MET MET A . n A 1 235 ASN 235 447 447 ASN ASN A . n A 1 236 LEU 236 448 448 LEU LEU A . n A 1 237 ASP 237 449 449 ASP ASP A . n A 1 238 CYS 238 450 450 CYS CYS A . n A 1 239 LEU 239 451 451 LEU LEU A . n A 1 240 LEU 240 452 452 LEU LEU A . n A 1 241 PRO 241 453 453 PRO PRO A . n A 1 242 GLN 242 454 454 GLN GLN A . n A 1 243 GLU 243 455 455 GLU GLU A . n A 1 244 TRP 244 456 456 TRP TRP A . n A 1 245 VAL 245 457 457 VAL VAL A . n A 1 246 GLN 246 458 458 GLN GLN A . n A 1 247 HIS 247 459 459 HIS HIS A . n A 1 248 PHE 248 460 460 PHE PHE A . n A 1 249 TYR 249 461 461 TYR TYR A . n A 1 250 GLN 250 462 462 GLN GLN A . n A 1 251 GLU 251 463 463 GLU GLU A . n A 1 252 ALA 252 464 464 ALA ALA A . n A 1 253 ALA 253 465 465 ALA ALA A . n A 1 254 PRO 254 466 466 PRO PRO A . n A 1 255 ALA 255 467 467 ALA ALA A . n A 1 256 GLN 256 468 468 GLN GLN A . n A 1 257 SER 257 469 469 SER SER A . n A 1 258 ASP 258 470 470 ASP ASP A . n A 1 259 VAL 259 471 471 VAL VAL A . n A 1 260 ALA 260 472 472 ALA ALA A . n A 1 261 LEU 261 473 473 LEU LEU A . n A 1 262 LEU 262 474 474 LEU LEU A . n A 1 263 ARG 263 475 475 ARG ARG A . n A 1 264 PHE 264 476 476 PHE PHE A . n A 1 265 VAL 265 477 477 VAL VAL A . n A 1 266 ASN 266 478 478 ASN ASN A . n A 1 267 PRO 267 479 479 PRO PRO A . n A 1 268 ASP 268 480 480 ASP ASP A . n A 1 269 THR 269 481 481 THR THR A . n A 1 270 GLY 270 482 482 GLY GLY A . n A 1 271 ARG 271 483 483 ARG ARG A . n A 1 272 VAL 272 484 484 VAL VAL A . n A 1 273 LEU 273 485 485 LEU LEU A . n A 1 274 PHE 274 486 486 PHE PHE A . n A 1 275 GLU 275 487 487 GLU GLU A . n A 1 276 CYS 276 488 488 CYS CYS A . n A 1 277 LYS 277 489 489 LYS LYS A . n A 1 278 LEU 278 490 490 LEU LEU A . n A 1 279 HIS 279 491 491 HIS HIS A . n A 1 280 LYS 280 492 492 LYS LYS A . n A 1 281 SER 281 493 493 SER SER A . n A 1 282 GLY 282 494 494 GLY GLY A . n A 1 283 TYR 283 495 495 TYR TYR A . n A 1 284 VAL 284 496 496 VAL VAL A . n A 1 285 THR 285 497 497 THR THR A . n A 1 286 VAL 286 498 498 VAL VAL A . n A 1 287 ALA 287 499 499 ALA ALA A . n A 1 288 HIS 288 500 500 HIS HIS A . n A 1 289 THR 289 501 501 THR THR A . n A 1 290 GLY 290 502 502 GLY GLY A . n A 1 291 PRO 291 503 503 PRO PRO A . n A 1 292 HIS 292 504 504 HIS HIS A . n A 1 293 ASP 293 505 505 ASP ASP A . n A 1 294 LEU 294 506 506 LEU LEU A . n A 1 295 VAL 295 507 507 VAL VAL A . n A 1 296 ILE 296 508 508 ILE ILE A . n A 1 297 PRO 297 509 509 PRO PRO A . n A 1 298 PRO 298 510 510 PRO PRO A . n A 1 299 ASN 299 511 511 ASN ASN A . n A 1 300 GLY 300 512 512 GLY GLY A . n A 1 301 TYR 301 513 513 TYR TYR A . n A 1 302 PHE 302 514 514 PHE PHE A . n A 1 303 ARG 303 515 515 ARG ARG A . n A 1 304 PHE 304 516 516 PHE PHE A . n A 1 305 ASP 305 517 517 ASP ASP A . n A 1 306 SER 306 518 518 SER SER A . n A 1 307 TRP 307 519 519 TRP TRP A . n A 1 308 VAL 308 520 520 VAL VAL A . n A 1 309 ASN 309 521 521 ASN ASN A . n A 1 310 GLN 310 522 522 GLN GLN A . n A 1 311 PHE 311 523 523 PHE PHE A . n A 1 312 TYR 312 524 524 TYR TYR A . n A 1 313 THR 313 525 525 THR THR A . n A 1 314 LEU 314 526 526 LEU LEU A . n A 1 315 ALA 315 527 527 ALA ALA A . n A 1 316 PRO 316 528 528 PRO PRO A . n A 1 317 MET 317 529 529 MET MET A . n A 1 318 GLY 318 530 530 GLY GLY A . n A 1 319 ASN 319 531 ? ? ? A . n A 1 320 GLY 320 532 ? ? ? A . n A 1 321 ALA 321 533 ? ? ? A . n A 1 322 GLY 322 534 ? ? ? A . n A 1 323 ARG 323 535 ? ? ? A . n A 1 324 ARG 324 536 ? ? ? A . n A 1 325 ARG 325 537 ? ? ? A . n A 1 326 ALA 326 538 ? ? ? A . n A 1 327 LEU 327 539 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 540 540 HOH HOH A . C 3 HOH 2 541 541 HOH HOH A . C 3 HOH 3 542 542 HOH HOH A . C 3 HOH 4 543 543 HOH HOH A . C 3 HOH 5 544 544 HOH HOH A . C 3 HOH 6 545 545 HOH HOH A . C 3 HOH 7 546 546 HOH HOH A . C 3 HOH 8 547 547 HOH HOH A . C 3 HOH 9 548 548 HOH HOH A . C 3 HOH 10 549 549 HOH HOH A . C 3 HOH 11 550 550 HOH HOH A . C 3 HOH 12 551 551 HOH HOH A . C 3 HOH 13 552 552 HOH HOH A . C 3 HOH 14 553 553 HOH HOH A . C 3 HOH 15 554 554 HOH HOH A . C 3 HOH 16 555 555 HOH HOH A . C 3 HOH 17 556 556 HOH HOH A . C 3 HOH 18 557 557 HOH HOH A . C 3 HOH 19 558 558 HOH HOH A . C 3 HOH 20 559 559 HOH HOH A . C 3 HOH 21 560 560 HOH HOH A . C 3 HOH 22 561 561 HOH HOH A . C 3 HOH 23 562 562 HOH HOH A . C 3 HOH 24 563 563 HOH HOH A . C 3 HOH 25 564 564 HOH HOH A . C 3 HOH 26 565 565 HOH HOH A . C 3 HOH 27 566 566 HOH HOH A . C 3 HOH 28 567 567 HOH HOH A . C 3 HOH 29 568 568 HOH HOH A . C 3 HOH 30 569 569 HOH HOH A . C 3 HOH 31 570 570 HOH HOH A . C 3 HOH 32 571 571 HOH HOH A . C 3 HOH 33 572 572 HOH HOH A . C 3 HOH 34 573 573 HOH HOH A . C 3 HOH 35 574 574 HOH HOH A . C 3 HOH 36 575 575 HOH HOH A . C 3 HOH 37 576 576 HOH HOH A . C 3 HOH 38 577 577 HOH HOH A . C 3 HOH 39 578 578 HOH HOH A . C 3 HOH 40 579 579 HOH HOH A . C 3 HOH 41 580 580 HOH HOH A . C 3 HOH 42 581 581 HOH HOH A . C 3 HOH 43 582 582 HOH HOH A . C 3 HOH 44 583 583 HOH HOH A . C 3 HOH 45 584 584 HOH HOH A . C 3 HOH 46 585 585 HOH HOH A . C 3 HOH 47 586 586 HOH HOH A . C 3 HOH 48 587 587 HOH HOH A . C 3 HOH 49 588 588 HOH HOH A . C 3 HOH 50 589 589 HOH HOH A . C 3 HOH 51 590 590 HOH HOH A . C 3 HOH 52 591 591 HOH HOH A . C 3 HOH 53 592 592 HOH HOH A . C 3 HOH 54 593 593 HOH HOH A . C 3 HOH 55 594 594 HOH HOH A . C 3 HOH 56 595 595 HOH HOH A . C 3 HOH 57 596 596 HOH HOH A . C 3 HOH 58 597 597 HOH HOH A . C 3 HOH 59 598 598 HOH HOH A . C 3 HOH 60 599 599 HOH HOH A . C 3 HOH 61 600 600 HOH HOH A . C 3 HOH 62 601 601 HOH HOH A . C 3 HOH 63 602 602 HOH HOH A . C 3 HOH 64 603 603 HOH HOH A . C 3 HOH 65 604 604 HOH HOH A . C 3 HOH 66 605 605 HOH HOH A . C 3 HOH 67 606 606 HOH HOH A . C 3 HOH 68 607 607 HOH HOH A . C 3 HOH 69 608 608 HOH HOH A . C 3 HOH 70 609 609 HOH HOH A . C 3 HOH 71 610 610 HOH HOH A . C 3 HOH 72 611 611 HOH HOH A . C 3 HOH 73 612 612 HOH HOH A . C 3 HOH 74 613 613 HOH HOH A . C 3 HOH 75 614 614 HOH HOH A . C 3 HOH 76 615 615 HOH HOH A . C 3 HOH 77 616 616 HOH HOH A . C 3 HOH 78 617 617 HOH HOH A . C 3 HOH 79 618 618 HOH HOH A . C 3 HOH 80 619 619 HOH HOH A . C 3 HOH 81 620 620 HOH HOH A . C 3 HOH 82 621 621 HOH HOH A . C 3 HOH 83 622 622 HOH HOH A . C 3 HOH 84 623 623 HOH HOH A . C 3 HOH 85 624 624 HOH HOH A . C 3 HOH 86 625 625 HOH HOH A . C 3 HOH 87 626 626 HOH HOH A . C 3 HOH 88 627 627 HOH HOH A . C 3 HOH 89 628 628 HOH HOH A . C 3 HOH 90 629 629 HOH HOH A . C 3 HOH 91 630 630 HOH HOH A . C 3 HOH 92 631 631 HOH HOH A . C 3 HOH 93 632 632 HOH HOH A . C 3 HOH 94 633 633 HOH HOH A . C 3 HOH 95 634 634 HOH HOH A . C 3 HOH 96 635 635 HOH HOH A . C 3 HOH 97 636 636 HOH HOH A . C 3 HOH 98 637 637 HOH HOH A . C 3 HOH 99 638 638 HOH HOH A . C 3 HOH 100 639 639 HOH HOH A . C 3 HOH 101 640 640 HOH HOH A . C 3 HOH 102 641 641 HOH HOH A . C 3 HOH 103 642 642 HOH HOH A . C 3 HOH 104 643 643 HOH HOH A . C 3 HOH 105 644 644 HOH HOH A . C 3 HOH 106 645 645 HOH HOH A . C 3 HOH 107 646 646 HOH HOH A . C 3 HOH 108 647 647 HOH HOH A . C 3 HOH 109 648 648 HOH HOH A . C 3 HOH 110 649 649 HOH HOH A . C 3 HOH 111 650 650 HOH HOH A . C 3 HOH 112 651 651 HOH HOH A . C 3 HOH 113 652 652 HOH HOH A . C 3 HOH 114 653 653 HOH HOH A . C 3 HOH 115 654 654 HOH HOH A . C 3 HOH 116 655 655 HOH HOH A . C 3 HOH 117 656 656 HOH HOH A . C 3 HOH 118 657 657 HOH HOH A . C 3 HOH 119 658 658 HOH HOH A . C 3 HOH 120 659 659 HOH HOH A . C 3 HOH 121 660 660 HOH HOH A . C 3 HOH 122 661 661 HOH HOH A . C 3 HOH 123 662 662 HOH HOH A . C 3 HOH 124 663 663 HOH HOH A . C 3 HOH 125 664 664 HOH HOH A . C 3 HOH 126 665 665 HOH HOH A . C 3 HOH 127 666 666 HOH HOH A . C 3 HOH 128 667 667 HOH HOH A . C 3 HOH 129 668 668 HOH HOH A . C 3 HOH 130 669 669 HOH HOH A . C 3 HOH 131 670 670 HOH HOH A . C 3 HOH 132 671 671 HOH HOH A . C 3 HOH 133 672 672 HOH HOH A . C 3 HOH 134 673 673 HOH HOH A . C 3 HOH 135 674 674 HOH HOH A . C 3 HOH 136 675 675 HOH HOH A . C 3 HOH 137 676 676 HOH HOH A . C 3 HOH 138 677 677 HOH HOH A . C 3 HOH 139 678 678 HOH HOH A . C 3 HOH 140 679 679 HOH HOH A . C 3 HOH 141 680 680 HOH HOH A . C 3 HOH 142 681 681 HOH HOH A . C 3 HOH 143 682 682 HOH HOH A . C 3 HOH 144 683 683 HOH HOH A . C 3 HOH 145 684 684 HOH HOH A . C 3 HOH 146 685 685 HOH HOH A . C 3 HOH 147 686 686 HOH HOH A . C 3 HOH 148 687 687 HOH HOH A . C 3 HOH 149 688 688 HOH HOH A . C 3 HOH 150 689 689 HOH HOH A . C 3 HOH 151 690 690 HOH HOH A . C 3 HOH 152 691 691 HOH HOH A . C 3 HOH 153 692 692 HOH HOH A . C 3 HOH 154 693 693 HOH HOH A . C 3 HOH 155 694 694 HOH HOH A . C 3 HOH 156 695 695 HOH HOH A . C 3 HOH 157 696 696 HOH HOH A . C 3 HOH 158 697 697 HOH HOH A . C 3 HOH 159 698 698 HOH HOH A . C 3 HOH 160 699 699 HOH HOH A . C 3 HOH 161 700 700 HOH HOH A . C 3 HOH 162 701 701 HOH HOH A . C 3 HOH 163 702 702 HOH HOH A . C 3 HOH 164 703 703 HOH HOH A . C 3 HOH 165 704 704 HOH HOH A . C 3 HOH 166 705 705 HOH HOH A . C 3 HOH 167 706 706 HOH HOH A . C 3 HOH 168 707 707 HOH HOH A . C 3 HOH 169 708 708 HOH HOH A . C 3 HOH 170 709 709 HOH HOH A . C 3 HOH 171 710 710 HOH HOH A . C 3 HOH 172 711 711 HOH HOH A . C 3 HOH 173 712 712 HOH HOH A . C 3 HOH 174 713 713 HOH HOH A . C 3 HOH 175 714 714 HOH HOH A . C 3 HOH 176 715 715 HOH HOH A . C 3 HOH 177 716 716 HOH HOH A . C 3 HOH 178 717 717 HOH HOH A . C 3 HOH 179 718 718 HOH HOH A . C 3 HOH 180 719 719 HOH HOH A . C 3 HOH 181 720 720 HOH HOH A . C 3 HOH 182 721 721 HOH HOH A . C 3 HOH 183 722 722 HOH HOH A . C 3 HOH 184 723 723 HOH HOH A . C 3 HOH 185 724 724 HOH HOH A . C 3 HOH 186 725 725 HOH HOH A . C 3 HOH 187 726 726 HOH HOH A . C 3 HOH 188 727 727 HOH HOH A . C 3 HOH 189 728 728 HOH HOH A . C 3 HOH 190 729 729 HOH HOH A . C 3 HOH 191 730 730 HOH HOH A . C 3 HOH 192 731 731 HOH HOH A . C 3 HOH 193 732 732 HOH HOH A . C 3 HOH 194 733 733 HOH HOH A . C 3 HOH 195 734 734 HOH HOH A . C 3 HOH 196 735 735 HOH HOH A . C 3 HOH 197 736 736 HOH HOH A . C 3 HOH 198 737 737 HOH HOH A . C 3 HOH 199 738 738 HOH HOH A . C 3 HOH 200 739 739 HOH HOH A . C 3 HOH 201 740 740 HOH HOH A . C 3 HOH 202 741 741 HOH HOH A . C 3 HOH 203 742 742 HOH HOH A . C 3 HOH 204 743 743 HOH HOH A . C 3 HOH 205 744 744 HOH HOH A . C 3 HOH 206 745 745 HOH HOH A . C 3 HOH 207 746 746 HOH HOH A . C 3 HOH 208 747 747 HOH HOH A . C 3 HOH 209 748 748 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5190 ? 1 MORE 5 ? 1 'SSA (A^2)' 24070 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 609 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-04-24 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-08-24 5 'Structure model' 1 4 2017-10-18 6 'Structure model' 2 0 2020-07-29 7 'Structure model' 2 1 2023-10-25 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 6 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Non-polymer description' 4 5 'Structure model' 'Refinement description' 5 6 'Structure model' Advisory 6 6 'Structure model' 'Atomic model' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Derived calculations' 10 6 'Structure model' 'Structure summary' 11 7 'Structure model' 'Data collection' 12 7 'Structure model' 'Database references' 13 7 'Structure model' 'Refinement description' 14 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' software 2 6 'Structure model' atom_site 3 6 'Structure model' chem_comp 4 6 'Structure model' database_PDB_caveat 5 6 'Structure model' entity 6 6 'Structure model' pdbx_branch_scheme 7 6 'Structure model' pdbx_chem_comp_identifier 8 6 'Structure model' pdbx_entity_branch 9 6 'Structure model' pdbx_entity_branch_descriptor 10 6 'Structure model' pdbx_entity_branch_link 11 6 'Structure model' pdbx_entity_branch_list 12 6 'Structure model' pdbx_entity_nonpoly 13 6 'Structure model' pdbx_nonpoly_scheme 14 6 'Structure model' pdbx_struct_assembly_gen 15 6 'Structure model' pdbx_struct_special_symmetry 16 6 'Structure model' pdbx_validate_chiral 17 6 'Structure model' pdbx_validate_symm_contact 18 6 'Structure model' struct_asym 19 6 'Structure model' struct_conn 20 6 'Structure model' struct_ref_seq_dif 21 6 'Structure model' struct_site 22 6 'Structure model' struct_site_gen 23 7 'Structure model' chem_comp 24 7 'Structure model' chem_comp_atom 25 7 'Structure model' chem_comp_bond 26 7 'Structure model' database_2 27 7 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_software.name' 2 6 'Structure model' '_atom_site.B_iso_or_equiv' 3 6 'Structure model' '_atom_site.Cartn_x' 4 6 'Structure model' '_atom_site.Cartn_y' 5 6 'Structure model' '_atom_site.Cartn_z' 6 6 'Structure model' '_atom_site.auth_asym_id' 7 6 'Structure model' '_atom_site.auth_atom_id' 8 6 'Structure model' '_atom_site.auth_comp_id' 9 6 'Structure model' '_atom_site.auth_seq_id' 10 6 'Structure model' '_atom_site.label_asym_id' 11 6 'Structure model' '_atom_site.label_atom_id' 12 6 'Structure model' '_atom_site.label_comp_id' 13 6 'Structure model' '_atom_site.label_entity_id' 14 6 'Structure model' '_atom_site.occupancy' 15 6 'Structure model' '_atom_site.type_symbol' 16 6 'Structure model' '_chem_comp.name' 17 6 'Structure model' '_chem_comp.type' 18 6 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 19 6 'Structure model' '_pdbx_validate_chiral.auth_asym_id' 20 6 'Structure model' '_pdbx_validate_chiral.auth_seq_id' 21 6 'Structure model' '_struct_conn.pdbx_dist_value' 22 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 23 6 'Structure model' '_struct_conn.pdbx_value_order' 24 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 25 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 31 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 32 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 6 'Structure model' '_struct_ref_seq_dif.details' 36 7 'Structure model' '_chem_comp.pdbx_synonyms' 37 7 'Structure model' '_database_2.pdbx_DOI' 38 7 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 PHASER phasing . ? 2 CNS refinement 1.1 ? 3 MAR345 'data collection' 345DTB ? 4 HKL-2000 'data reduction' . ? 5 SCALEPACK 'data scaling' . ? 6 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 560 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 560 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_555 _pdbx_validate_symm_contact.dist 2.07 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 254 ? ? -141.75 16.20 2 1 ALA A 294 ? ? -38.48 136.44 3 1 ASN A 373 ? ? 64.45 -55.89 4 1 LEU A 375 ? ? 170.16 99.56 5 1 VAL A 386 ? ? -127.66 -53.08 6 1 ASN A 393 ? ? -64.87 -166.98 7 1 SER A 441 ? ? 174.32 148.73 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C3 ? B GL0 1 ? PLANAR . 2 1 C1 ? B A2G 3 ? PLANAR . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 213 ? A GLY 1 2 1 Y 1 A PHE 214 ? A PHE 2 3 1 Y 1 A LEU 215 ? A LEU 3 4 1 Y 1 A VAL 216 ? A VAL 4 5 1 Y 1 A PRO 217 ? A PRO 5 6 1 Y 1 A PRO 218 ? A PRO 6 7 1 Y 1 A THR 219 ? A THR 7 8 1 Y 1 A VAL 220 ? A VAL 8 9 1 Y 1 A GLU 221 ? A GLU 9 10 1 Y 1 A SER 222 ? A SER 10 11 1 Y 1 A ARG 223 ? A ARG 11 12 1 Y 1 A ASN 531 ? A ASN 319 13 1 Y 1 A GLY 532 ? A GLY 320 14 1 Y 1 A ALA 533 ? A ALA 321 15 1 Y 1 A GLY 534 ? A GLY 322 16 1 Y 1 A ARG 535 ? A ARG 323 17 1 Y 1 A ARG 536 ? A ARG 324 18 1 Y 1 A ARG 537 ? A ARG 325 19 1 Y 1 A ALA 538 ? A ALA 326 20 1 Y 1 A LEU 539 ? A LEU 327 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A2G O5 O N N 1 A2G C1 C N S 2 A2G O1 O N N 3 A2G C2 C N R 4 A2G N2 N N N 5 A2G C3 C N R 6 A2G O3 O N N 7 A2G C4 C N R 8 A2G O4 O N N 9 A2G C5 C N R 10 A2G C6 C N N 11 A2G O6 O N N 12 A2G C7 C N N 13 A2G O7 O N N 14 A2G C8 C N N 15 A2G H1 H N N 16 A2G HO1 H N N 17 A2G H2 H N N 18 A2G HN2 H N N 19 A2G H3 H N N 20 A2G HO3 H N N 21 A2G H4 H N N 22 A2G HO4 H N N 23 A2G H5 H N N 24 A2G H61 H N N 25 A2G H81 H N N 26 A2G H82 H N N 27 A2G H83 H N N 28 A2G H62 H N N 29 A2G HO6 H N N 30 ALA N N N N 31 ALA CA C N S 32 ALA C C N N 33 ALA O O N N 34 ALA CB C N N 35 ALA OXT O N N 36 ALA H H N N 37 ALA H2 H N N 38 ALA HA H N N 39 ALA HB1 H N N 40 ALA HB2 H N N 41 ALA HB3 H N N 42 ALA HXT H N N 43 ARG N N N N 44 ARG CA C N S 45 ARG C C N N 46 ARG O O N N 47 ARG CB C N N 48 ARG CG C N N 49 ARG CD C N N 50 ARG NE N N N 51 ARG CZ C N N 52 ARG NH1 N N N 53 ARG NH2 N N N 54 ARG OXT O N N 55 ARG H H N N 56 ARG H2 H N N 57 ARG HA H N N 58 ARG HB2 H N N 59 ARG HB3 H N N 60 ARG HG2 H N N 61 ARG HG3 H N N 62 ARG HD2 H N N 63 ARG HD3 H N N 64 ARG HE H N N 65 ARG HH11 H N N 66 ARG HH12 H N N 67 ARG HH21 H N N 68 ARG HH22 H N N 69 ARG HXT H N N 70 ASN N N N N 71 ASN CA C N S 72 ASN C C N N 73 ASN O O N N 74 ASN CB C N N 75 ASN CG C N N 76 ASN OD1 O N N 77 ASN ND2 N N N 78 ASN OXT O N N 79 ASN H H N N 80 ASN H2 H N N 81 ASN HA H N N 82 ASN HB2 H N N 83 ASN HB3 H N N 84 ASN HD21 H N N 85 ASN HD22 H N N 86 ASN HXT H N N 87 ASP N N N N 88 ASP CA C N S 89 ASP C C N N 90 ASP O O N N 91 ASP CB C N N 92 ASP CG C N N 93 ASP OD1 O N N 94 ASP OD2 O N N 95 ASP OXT O N N 96 ASP H H N N 97 ASP H2 H N N 98 ASP HA H N N 99 ASP HB2 H N N 100 ASP HB3 H N N 101 ASP HD2 H N N 102 ASP HXT H N N 103 CYS N N N N 104 CYS CA C N R 105 CYS C C N N 106 CYS O O N N 107 CYS CB C N N 108 CYS SG S N N 109 CYS OXT O N N 110 CYS H H N N 111 CYS H2 H N N 112 CYS HA H N N 113 CYS HB2 H N N 114 CYS HB3 H N N 115 CYS HG H N N 116 CYS HXT H N N 117 FUC C1 C N R 118 FUC C2 C N S 119 FUC C3 C N R 120 FUC C4 C N S 121 FUC C5 C N S 122 FUC C6 C N N 123 FUC O1 O N N 124 FUC O2 O N N 125 FUC O3 O N N 126 FUC O4 O N N 127 FUC O5 O N N 128 FUC H1 H N N 129 FUC H2 H N N 130 FUC H3 H N N 131 FUC H4 H N N 132 FUC H5 H N N 133 FUC H61 H N N 134 FUC H62 H N N 135 FUC H63 H N N 136 FUC HO1 H N N 137 FUC HO2 H N N 138 FUC HO3 H N N 139 FUC HO4 H N N 140 GL0 O2 O N N 141 GL0 C1 C N R 142 GL0 C2 C N R 143 GL0 C3 C N R 144 GL0 C4 C N R 145 GL0 C5 C N R 146 GL0 C6 C N N 147 GL0 O1 O N N 148 GL0 O4 O N N 149 GL0 O5 O N N 150 GL0 O6 O N N 151 GL0 HO2 H N N 152 GL0 H1 H N N 153 GL0 H2 H N N 154 GL0 H4 H N N 155 GL0 H5 H N N 156 GL0 H61 H N N 157 GL0 H62 H N N 158 GL0 HO4 H N N 159 GL0 HO6 H N N 160 GL0 H3 H N N 161 GL0 O3 O N N 162 GL0 HO3 H N N 163 GL0 HO1 H N N 164 GLN N N N N 165 GLN CA C N S 166 GLN C C N N 167 GLN O O N N 168 GLN CB C N N 169 GLN CG C N N 170 GLN CD C N N 171 GLN OE1 O N N 172 GLN NE2 N N N 173 GLN OXT O N N 174 GLN H H N N 175 GLN H2 H N N 176 GLN HA H N N 177 GLN HB2 H N N 178 GLN HB3 H N N 179 GLN HG2 H N N 180 GLN HG3 H N N 181 GLN HE21 H N N 182 GLN HE22 H N N 183 GLN HXT H N N 184 GLU N N N N 185 GLU CA C N S 186 GLU C C N N 187 GLU O O N N 188 GLU CB C N N 189 GLU CG C N N 190 GLU CD C N N 191 GLU OE1 O N N 192 GLU OE2 O N N 193 GLU OXT O N N 194 GLU H H N N 195 GLU H2 H N N 196 GLU HA H N N 197 GLU HB2 H N N 198 GLU HB3 H N N 199 GLU HG2 H N N 200 GLU HG3 H N N 201 GLU HE2 H N N 202 GLU HXT H N N 203 GLY N N N N 204 GLY CA C N N 205 GLY C C N N 206 GLY O O N N 207 GLY OXT O N N 208 GLY H H N N 209 GLY H2 H N N 210 GLY HA2 H N N 211 GLY HA3 H N N 212 GLY HXT H N N 213 HIS N N N N 214 HIS CA C N S 215 HIS C C N N 216 HIS O O N N 217 HIS CB C N N 218 HIS CG C Y N 219 HIS ND1 N Y N 220 HIS CD2 C Y N 221 HIS CE1 C Y N 222 HIS NE2 N Y N 223 HIS OXT O N N 224 HIS H H N N 225 HIS H2 H N N 226 HIS HA H N N 227 HIS HB2 H N N 228 HIS HB3 H N N 229 HIS HD1 H N N 230 HIS HD2 H N N 231 HIS HE1 H N N 232 HIS HE2 H N N 233 HIS HXT H N N 234 HOH O O N N 235 HOH H1 H N N 236 HOH H2 H N N 237 ILE N N N N 238 ILE CA C N S 239 ILE C C N N 240 ILE O O N N 241 ILE CB C N S 242 ILE CG1 C N N 243 ILE CG2 C N N 244 ILE CD1 C N N 245 ILE OXT O N N 246 ILE H H N N 247 ILE H2 H N N 248 ILE HA H N N 249 ILE HB H N N 250 ILE HG12 H N N 251 ILE HG13 H N N 252 ILE HG21 H N N 253 ILE HG22 H N N 254 ILE HG23 H N N 255 ILE HD11 H N N 256 ILE HD12 H N N 257 ILE HD13 H N N 258 ILE HXT H N N 259 LEU N N N N 260 LEU CA C N S 261 LEU C C N N 262 LEU O O N N 263 LEU CB C N N 264 LEU CG C N N 265 LEU CD1 C N N 266 LEU CD2 C N N 267 LEU OXT O N N 268 LEU H H N N 269 LEU H2 H N N 270 LEU HA H N N 271 LEU HB2 H N N 272 LEU HB3 H N N 273 LEU HG H N N 274 LEU HD11 H N N 275 LEU HD12 H N N 276 LEU HD13 H N N 277 LEU HD21 H N N 278 LEU HD22 H N N 279 LEU HD23 H N N 280 LEU HXT H N N 281 LYS N N N N 282 LYS CA C N S 283 LYS C C N N 284 LYS O O N N 285 LYS CB C N N 286 LYS CG C N N 287 LYS CD C N N 288 LYS CE C N N 289 LYS NZ N N N 290 LYS OXT O N N 291 LYS H H N N 292 LYS H2 H N N 293 LYS HA H N N 294 LYS HB2 H N N 295 LYS HB3 H N N 296 LYS HG2 H N N 297 LYS HG3 H N N 298 LYS HD2 H N N 299 LYS HD3 H N N 300 LYS HE2 H N N 301 LYS HE3 H N N 302 LYS HZ1 H N N 303 LYS HZ2 H N N 304 LYS HZ3 H N N 305 LYS HXT H N N 306 MET N N N N 307 MET CA C N S 308 MET C C N N 309 MET O O N N 310 MET CB C N N 311 MET CG C N N 312 MET SD S N N 313 MET CE C N N 314 MET OXT O N N 315 MET H H N N 316 MET H2 H N N 317 MET HA H N N 318 MET HB2 H N N 319 MET HB3 H N N 320 MET HG2 H N N 321 MET HG3 H N N 322 MET HE1 H N N 323 MET HE2 H N N 324 MET HE3 H N N 325 MET HXT H N N 326 PHE N N N N 327 PHE CA C N S 328 PHE C C N N 329 PHE O O N N 330 PHE CB C N N 331 PHE CG C Y N 332 PHE CD1 C Y N 333 PHE CD2 C Y N 334 PHE CE1 C Y N 335 PHE CE2 C Y N 336 PHE CZ C Y N 337 PHE OXT O N N 338 PHE H H N N 339 PHE H2 H N N 340 PHE HA H N N 341 PHE HB2 H N N 342 PHE HB3 H N N 343 PHE HD1 H N N 344 PHE HD2 H N N 345 PHE HE1 H N N 346 PHE HE2 H N N 347 PHE HZ H N N 348 PHE HXT H N N 349 PRO N N N N 350 PRO CA C N S 351 PRO C C N N 352 PRO O O N N 353 PRO CB C N N 354 PRO CG C N N 355 PRO CD C N N 356 PRO OXT O N N 357 PRO H H N N 358 PRO HA H N N 359 PRO HB2 H N N 360 PRO HB3 H N N 361 PRO HG2 H N N 362 PRO HG3 H N N 363 PRO HD2 H N N 364 PRO HD3 H N N 365 PRO HXT H N N 366 SER N N N N 367 SER CA C N S 368 SER C C N N 369 SER O O N N 370 SER CB C N N 371 SER OG O N N 372 SER OXT O N N 373 SER H H N N 374 SER H2 H N N 375 SER HA H N N 376 SER HB2 H N N 377 SER HB3 H N N 378 SER HG H N N 379 SER HXT H N N 380 THR N N N N 381 THR CA C N S 382 THR C C N N 383 THR O O N N 384 THR CB C N R 385 THR OG1 O N N 386 THR CG2 C N N 387 THR OXT O N N 388 THR H H N N 389 THR H2 H N N 390 THR HA H N N 391 THR HB H N N 392 THR HG1 H N N 393 THR HG21 H N N 394 THR HG22 H N N 395 THR HG23 H N N 396 THR HXT H N N 397 TRP N N N N 398 TRP CA C N S 399 TRP C C N N 400 TRP O O N N 401 TRP CB C N N 402 TRP CG C Y N 403 TRP CD1 C Y N 404 TRP CD2 C Y N 405 TRP NE1 N Y N 406 TRP CE2 C Y N 407 TRP CE3 C Y N 408 TRP CZ2 C Y N 409 TRP CZ3 C Y N 410 TRP CH2 C Y N 411 TRP OXT O N N 412 TRP H H N N 413 TRP H2 H N N 414 TRP HA H N N 415 TRP HB2 H N N 416 TRP HB3 H N N 417 TRP HD1 H N N 418 TRP HE1 H N N 419 TRP HE3 H N N 420 TRP HZ2 H N N 421 TRP HZ3 H N N 422 TRP HH2 H N N 423 TRP HXT H N N 424 TYR N N N N 425 TYR CA C N S 426 TYR C C N N 427 TYR O O N N 428 TYR CB C N N 429 TYR CG C Y N 430 TYR CD1 C Y N 431 TYR CD2 C Y N 432 TYR CE1 C Y N 433 TYR CE2 C Y N 434 TYR CZ C Y N 435 TYR OH O N N 436 TYR OXT O N N 437 TYR H H N N 438 TYR H2 H N N 439 TYR HA H N N 440 TYR HB2 H N N 441 TYR HB3 H N N 442 TYR HD1 H N N 443 TYR HD2 H N N 444 TYR HE1 H N N 445 TYR HE2 H N N 446 TYR HH H N N 447 TYR HXT H N N 448 VAL N N N N 449 VAL CA C N S 450 VAL C C N N 451 VAL O O N N 452 VAL CB C N N 453 VAL CG1 C N N 454 VAL CG2 C N N 455 VAL OXT O N N 456 VAL H H N N 457 VAL H2 H N N 458 VAL HA H N N 459 VAL HB H N N 460 VAL HG11 H N N 461 VAL HG12 H N N 462 VAL HG13 H N N 463 VAL HG21 H N N 464 VAL HG22 H N N 465 VAL HG23 H N N 466 VAL HXT H N N 467 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A2G O5 C5 sing N N 1 A2G C1 O5 sing N N 2 A2G C1 C2 sing N N 3 A2G C1 H1 sing N N 4 A2G O1 C1 sing N N 5 A2G O1 HO1 sing N N 6 A2G C2 C3 sing N N 7 A2G C2 H2 sing N N 8 A2G N2 C2 sing N N 9 A2G N2 HN2 sing N N 10 A2G C3 C4 sing N N 11 A2G C3 O3 sing N N 12 A2G C3 H3 sing N N 13 A2G O3 HO3 sing N N 14 A2G C4 O4 sing N N 15 A2G C4 H4 sing N N 16 A2G O4 HO4 sing N N 17 A2G C5 C4 sing N N 18 A2G C5 C6 sing N N 19 A2G C5 H5 sing N N 20 A2G C6 O6 sing N N 21 A2G C6 H61 sing N N 22 A2G C7 N2 sing N N 23 A2G O7 C7 doub N N 24 A2G C8 C7 sing N N 25 A2G C8 H81 sing N N 26 A2G C8 H82 sing N N 27 A2G C8 H83 sing N N 28 A2G C6 H62 sing N N 29 A2G O6 HO6 sing N N 30 ALA N CA sing N N 31 ALA N H sing N N 32 ALA N H2 sing N N 33 ALA CA C sing N N 34 ALA CA CB sing N N 35 ALA CA HA sing N N 36 ALA C O doub N N 37 ALA C OXT sing N N 38 ALA CB HB1 sing N N 39 ALA CB HB2 sing N N 40 ALA CB HB3 sing N N 41 ALA OXT HXT sing N N 42 ARG N CA sing N N 43 ARG N H sing N N 44 ARG N H2 sing N N 45 ARG CA C sing N N 46 ARG CA CB sing N N 47 ARG CA HA sing N N 48 ARG C O doub N N 49 ARG C OXT sing N N 50 ARG CB CG sing N N 51 ARG CB HB2 sing N N 52 ARG CB HB3 sing N N 53 ARG CG CD sing N N 54 ARG CG HG2 sing N N 55 ARG CG HG3 sing N N 56 ARG CD NE sing N N 57 ARG CD HD2 sing N N 58 ARG CD HD3 sing N N 59 ARG NE CZ sing N N 60 ARG NE HE sing N N 61 ARG CZ NH1 sing N N 62 ARG CZ NH2 doub N N 63 ARG NH1 HH11 sing N N 64 ARG NH1 HH12 sing N N 65 ARG NH2 HH21 sing N N 66 ARG NH2 HH22 sing N N 67 ARG OXT HXT sing N N 68 ASN N CA sing N N 69 ASN N H sing N N 70 ASN N H2 sing N N 71 ASN CA C sing N N 72 ASN CA CB sing N N 73 ASN CA HA sing N N 74 ASN C O doub N N 75 ASN C OXT sing N N 76 ASN CB CG sing N N 77 ASN CB HB2 sing N N 78 ASN CB HB3 sing N N 79 ASN CG OD1 doub N N 80 ASN CG ND2 sing N N 81 ASN ND2 HD21 sing N N 82 ASN ND2 HD22 sing N N 83 ASN OXT HXT sing N N 84 ASP N CA sing N N 85 ASP N H sing N N 86 ASP N H2 sing N N 87 ASP CA C sing N N 88 ASP CA CB sing N N 89 ASP CA HA sing N N 90 ASP C O doub N N 91 ASP C OXT sing N N 92 ASP CB CG sing N N 93 ASP CB HB2 sing N N 94 ASP CB HB3 sing N N 95 ASP CG OD1 doub N N 96 ASP CG OD2 sing N N 97 ASP OD2 HD2 sing N N 98 ASP OXT HXT sing N N 99 CYS N CA sing N N 100 CYS N H sing N N 101 CYS N H2 sing N N 102 CYS CA C sing N N 103 CYS CA CB sing N N 104 CYS CA HA sing N N 105 CYS C O doub N N 106 CYS C OXT sing N N 107 CYS CB SG sing N N 108 CYS CB HB2 sing N N 109 CYS CB HB3 sing N N 110 CYS SG HG sing N N 111 CYS OXT HXT sing N N 112 FUC C1 C2 sing N N 113 FUC C1 O1 sing N N 114 FUC C1 O5 sing N N 115 FUC C1 H1 sing N N 116 FUC C2 C3 sing N N 117 FUC C2 O2 sing N N 118 FUC C2 H2 sing N N 119 FUC C3 C4 sing N N 120 FUC C3 O3 sing N N 121 FUC C3 H3 sing N N 122 FUC C4 C5 sing N N 123 FUC C4 O4 sing N N 124 FUC C4 H4 sing N N 125 FUC C5 C6 sing N N 126 FUC C5 O5 sing N N 127 FUC C5 H5 sing N N 128 FUC C6 H61 sing N N 129 FUC C6 H62 sing N N 130 FUC C6 H63 sing N N 131 FUC O1 HO1 sing N N 132 FUC O2 HO2 sing N N 133 FUC O3 HO3 sing N N 134 FUC O4 HO4 sing N N 135 GL0 O2 C2 sing N N 136 GL0 O2 HO2 sing N N 137 GL0 C1 C2 sing N N 138 GL0 C1 O1 sing N N 139 GL0 C1 O5 sing N N 140 GL0 C1 H1 sing N N 141 GL0 C2 C3 sing N N 142 GL0 C2 H2 sing N N 143 GL0 C3 C4 sing N N 144 GL0 C3 H3 sing N N 145 GL0 C3 O3 sing N N 146 GL0 C4 C5 sing N N 147 GL0 C4 O4 sing N N 148 GL0 C4 H4 sing N N 149 GL0 C5 C6 sing N N 150 GL0 C5 O5 sing N N 151 GL0 C5 H5 sing N N 152 GL0 C6 O6 sing N N 153 GL0 C6 H61 sing N N 154 GL0 C6 H62 sing N N 155 GL0 O4 HO4 sing N N 156 GL0 O6 HO6 sing N N 157 GL0 O3 HO3 sing N N 158 GL0 O1 HO1 sing N N 159 GLN N CA sing N N 160 GLN N H sing N N 161 GLN N H2 sing N N 162 GLN CA C sing N N 163 GLN CA CB sing N N 164 GLN CA HA sing N N 165 GLN C O doub N N 166 GLN C OXT sing N N 167 GLN CB CG sing N N 168 GLN CB HB2 sing N N 169 GLN CB HB3 sing N N 170 GLN CG CD sing N N 171 GLN CG HG2 sing N N 172 GLN CG HG3 sing N N 173 GLN CD OE1 doub N N 174 GLN CD NE2 sing N N 175 GLN NE2 HE21 sing N N 176 GLN NE2 HE22 sing N N 177 GLN OXT HXT sing N N 178 GLU N CA sing N N 179 GLU N H sing N N 180 GLU N H2 sing N N 181 GLU CA C sing N N 182 GLU CA CB sing N N 183 GLU CA HA sing N N 184 GLU C O doub N N 185 GLU C OXT sing N N 186 GLU CB CG sing N N 187 GLU CB HB2 sing N N 188 GLU CB HB3 sing N N 189 GLU CG CD sing N N 190 GLU CG HG2 sing N N 191 GLU CG HG3 sing N N 192 GLU CD OE1 doub N N 193 GLU CD OE2 sing N N 194 GLU OE2 HE2 sing N N 195 GLU OXT HXT sing N N 196 GLY N CA sing N N 197 GLY N H sing N N 198 GLY N H2 sing N N 199 GLY CA C sing N N 200 GLY CA HA2 sing N N 201 GLY CA HA3 sing N N 202 GLY C O doub N N 203 GLY C OXT sing N N 204 GLY OXT HXT sing N N 205 HIS N CA sing N N 206 HIS N H sing N N 207 HIS N H2 sing N N 208 HIS CA C sing N N 209 HIS CA CB sing N N 210 HIS CA HA sing N N 211 HIS C O doub N N 212 HIS C OXT sing N N 213 HIS CB CG sing N N 214 HIS CB HB2 sing N N 215 HIS CB HB3 sing N N 216 HIS CG ND1 sing Y N 217 HIS CG CD2 doub Y N 218 HIS ND1 CE1 doub Y N 219 HIS ND1 HD1 sing N N 220 HIS CD2 NE2 sing Y N 221 HIS CD2 HD2 sing N N 222 HIS CE1 NE2 sing Y N 223 HIS CE1 HE1 sing N N 224 HIS NE2 HE2 sing N N 225 HIS OXT HXT sing N N 226 HOH O H1 sing N N 227 HOH O H2 sing N N 228 ILE N CA sing N N 229 ILE N H sing N N 230 ILE N H2 sing N N 231 ILE CA C sing N N 232 ILE CA CB sing N N 233 ILE CA HA sing N N 234 ILE C O doub N N 235 ILE C OXT sing N N 236 ILE CB CG1 sing N N 237 ILE CB CG2 sing N N 238 ILE CB HB sing N N 239 ILE CG1 CD1 sing N N 240 ILE CG1 HG12 sing N N 241 ILE CG1 HG13 sing N N 242 ILE CG2 HG21 sing N N 243 ILE CG2 HG22 sing N N 244 ILE CG2 HG23 sing N N 245 ILE CD1 HD11 sing N N 246 ILE CD1 HD12 sing N N 247 ILE CD1 HD13 sing N N 248 ILE OXT HXT sing N N 249 LEU N CA sing N N 250 LEU N H sing N N 251 LEU N H2 sing N N 252 LEU CA C sing N N 253 LEU CA CB sing N N 254 LEU CA HA sing N N 255 LEU C O doub N N 256 LEU C OXT sing N N 257 LEU CB CG sing N N 258 LEU CB HB2 sing N N 259 LEU CB HB3 sing N N 260 LEU CG CD1 sing N N 261 LEU CG CD2 sing N N 262 LEU CG HG sing N N 263 LEU CD1 HD11 sing N N 264 LEU CD1 HD12 sing N N 265 LEU CD1 HD13 sing N N 266 LEU CD2 HD21 sing N N 267 LEU CD2 HD22 sing N N 268 LEU CD2 HD23 sing N N 269 LEU OXT HXT sing N N 270 LYS N CA sing N N 271 LYS N H sing N N 272 LYS N H2 sing N N 273 LYS CA C sing N N 274 LYS CA CB sing N N 275 LYS CA HA sing N N 276 LYS C O doub N N 277 LYS C OXT sing N N 278 LYS CB CG sing N N 279 LYS CB HB2 sing N N 280 LYS CB HB3 sing N N 281 LYS CG CD sing N N 282 LYS CG HG2 sing N N 283 LYS CG HG3 sing N N 284 LYS CD CE sing N N 285 LYS CD HD2 sing N N 286 LYS CD HD3 sing N N 287 LYS CE NZ sing N N 288 LYS CE HE2 sing N N 289 LYS CE HE3 sing N N 290 LYS NZ HZ1 sing N N 291 LYS NZ HZ2 sing N N 292 LYS NZ HZ3 sing N N 293 LYS OXT HXT sing N N 294 MET N CA sing N N 295 MET N H sing N N 296 MET N H2 sing N N 297 MET CA C sing N N 298 MET CA CB sing N N 299 MET CA HA sing N N 300 MET C O doub N N 301 MET C OXT sing N N 302 MET CB CG sing N N 303 MET CB HB2 sing N N 304 MET CB HB3 sing N N 305 MET CG SD sing N N 306 MET CG HG2 sing N N 307 MET CG HG3 sing N N 308 MET SD CE sing N N 309 MET CE HE1 sing N N 310 MET CE HE2 sing N N 311 MET CE HE3 sing N N 312 MET OXT HXT sing N N 313 PHE N CA sing N N 314 PHE N H sing N N 315 PHE N H2 sing N N 316 PHE CA C sing N N 317 PHE CA CB sing N N 318 PHE CA HA sing N N 319 PHE C O doub N N 320 PHE C OXT sing N N 321 PHE CB CG sing N N 322 PHE CB HB2 sing N N 323 PHE CB HB3 sing N N 324 PHE CG CD1 doub Y N 325 PHE CG CD2 sing Y N 326 PHE CD1 CE1 sing Y N 327 PHE CD1 HD1 sing N N 328 PHE CD2 CE2 doub Y N 329 PHE CD2 HD2 sing N N 330 PHE CE1 CZ doub Y N 331 PHE CE1 HE1 sing N N 332 PHE CE2 CZ sing Y N 333 PHE CE2 HE2 sing N N 334 PHE CZ HZ sing N N 335 PHE OXT HXT sing N N 336 PRO N CA sing N N 337 PRO N CD sing N N 338 PRO N H sing N N 339 PRO CA C sing N N 340 PRO CA CB sing N N 341 PRO CA HA sing N N 342 PRO C O doub N N 343 PRO C OXT sing N N 344 PRO CB CG sing N N 345 PRO CB HB2 sing N N 346 PRO CB HB3 sing N N 347 PRO CG CD sing N N 348 PRO CG HG2 sing N N 349 PRO CG HG3 sing N N 350 PRO CD HD2 sing N N 351 PRO CD HD3 sing N N 352 PRO OXT HXT sing N N 353 SER N CA sing N N 354 SER N H sing N N 355 SER N H2 sing N N 356 SER CA C sing N N 357 SER CA CB sing N N 358 SER CA HA sing N N 359 SER C O doub N N 360 SER C OXT sing N N 361 SER CB OG sing N N 362 SER CB HB2 sing N N 363 SER CB HB3 sing N N 364 SER OG HG sing N N 365 SER OXT HXT sing N N 366 THR N CA sing N N 367 THR N H sing N N 368 THR N H2 sing N N 369 THR CA C sing N N 370 THR CA CB sing N N 371 THR CA HA sing N N 372 THR C O doub N N 373 THR C OXT sing N N 374 THR CB OG1 sing N N 375 THR CB CG2 sing N N 376 THR CB HB sing N N 377 THR OG1 HG1 sing N N 378 THR CG2 HG21 sing N N 379 THR CG2 HG22 sing N N 380 THR CG2 HG23 sing N N 381 THR OXT HXT sing N N 382 TRP N CA sing N N 383 TRP N H sing N N 384 TRP N H2 sing N N 385 TRP CA C sing N N 386 TRP CA CB sing N N 387 TRP CA HA sing N N 388 TRP C O doub N N 389 TRP C OXT sing N N 390 TRP CB CG sing N N 391 TRP CB HB2 sing N N 392 TRP CB HB3 sing N N 393 TRP CG CD1 doub Y N 394 TRP CG CD2 sing Y N 395 TRP CD1 NE1 sing Y N 396 TRP CD1 HD1 sing N N 397 TRP CD2 CE2 doub Y N 398 TRP CD2 CE3 sing Y N 399 TRP NE1 CE2 sing Y N 400 TRP NE1 HE1 sing N N 401 TRP CE2 CZ2 sing Y N 402 TRP CE3 CZ3 doub Y N 403 TRP CE3 HE3 sing N N 404 TRP CZ2 CH2 doub Y N 405 TRP CZ2 HZ2 sing N N 406 TRP CZ3 CH2 sing Y N 407 TRP CZ3 HZ3 sing N N 408 TRP CH2 HH2 sing N N 409 TRP OXT HXT sing N N 410 TYR N CA sing N N 411 TYR N H sing N N 412 TYR N H2 sing N N 413 TYR CA C sing N N 414 TYR CA CB sing N N 415 TYR CA HA sing N N 416 TYR C O doub N N 417 TYR C OXT sing N N 418 TYR CB CG sing N N 419 TYR CB HB2 sing N N 420 TYR CB HB3 sing N N 421 TYR CG CD1 doub Y N 422 TYR CG CD2 sing Y N 423 TYR CD1 CE1 sing Y N 424 TYR CD1 HD1 sing N N 425 TYR CD2 CE2 doub Y N 426 TYR CD2 HD2 sing N N 427 TYR CE1 CZ doub Y N 428 TYR CE1 HE1 sing N N 429 TYR CE2 CZ sing Y N 430 TYR CE2 HE2 sing N N 431 TYR CZ OH sing N N 432 TYR OH HH sing N N 433 TYR OXT HXT sing N N 434 VAL N CA sing N N 435 VAL N H sing N N 436 VAL N H2 sing N N 437 VAL CA C sing N N 438 VAL CA CB sing N N 439 VAL CA HA sing N N 440 VAL C O doub N N 441 VAL C OXT sing N N 442 VAL CB CG1 sing N N 443 VAL CB CG2 sing N N 444 VAL CB HB sing N N 445 VAL CG1 HG11 sing N N 446 VAL CG1 HG12 sing N N 447 VAL CG1 HG13 sing N N 448 VAL CG2 HG21 sing N N 449 VAL CG2 HG22 sing N N 450 VAL CG2 HG23 sing N N 451 VAL OXT HXT sing N N 452 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 GL0 1 B GL0 1 A FUC 1 n B 2 FUC 2 B FUC 2 A FUC 1 n B 2 A2G 3 B A2G 3 A A2G 3 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A2G 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpNAca A2G 'COMMON NAME' GMML 1.0 N-acetyl-a-D-galactopyranosamine A2G 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GalpNAc A2G 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalNAc FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc GL0 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGulpb GL0 'COMMON NAME' GMML 1.0 b-D-gulopyranose GL0 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Gulp GL0 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gul # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'LFucpa1-2[DGalpNAca1-3]DGulpb1-ROH' 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,3,2/[a2212h-1b_1-5][a1221m-1a_1-5][a2112h-1a_1-5_2*NCC/3=O]/1-2-3/a2-b1_a3-c1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-Gulp]{[(2+1)][a-L-Fucp]{}[(3+1)][a-D-GalpNAc]{}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 FUC C1 O1 1 GL0 O2 HO2 sing ? 2 2 3 A2G C1 O1 1 GL0 O3 HO3 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 GL0 1 n 2 FUC 2 n 2 A2G 3 n # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2OBR _pdbx_initial_refinement_model.details ? #