data_2OFI # _entry.id 2OFI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2OFI pdb_00002ofi 10.2210/pdb2ofi/pdb NDB PD0960 ? ? RCSB RCSB041070 ? ? WWPDB D_1000041070 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-05-15 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-12-27 5 'Structure model' 1 4 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site 8 5 'Structure model' pdbx_entry_details 9 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.value' 21 4 'Structure model' '_struct_conn.conn_type_id' 22 4 'Structure model' '_struct_conn.id' 23 4 'Structure model' '_struct_conn.pdbx_dist_value' 24 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 25 4 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 26 4 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 27 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 28 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 29 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 32 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 33 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 35 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 36 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 39 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 40 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 41 4 'Structure model' '_struct_ref_seq_dif.details' 42 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 43 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 44 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2OFI _pdbx_database_status.recvd_initial_deposition_date 2007-01-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Metz, A.H.' 1 'Hollis, T.' 2 'Eichman, B.F.' 3 # _citation.id primary _citation.title 'DNA damage recognition and repair by 3-methyladenine DNA glycosylase I (TAG).' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 26 _citation.page_first 2411 _citation.page_last 2420 _citation.year 2007 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17410210 _citation.pdbx_database_id_DOI 10.1038/sj.emboj.7601649 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Metz, A.H.' 1 ? primary 'Hollis, T.' 2 ? primary 'Eichman, B.F.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*GP*GP*AP*CP*TP*(3DR)P*AP*CP*GP*GP*G)-3'" 3614.354 1 ? ? ? ? 2 polymer syn "5'-D(*CP*CP*GP*TP*TP*AP*GP*TP*CP*CP*GP*C)-3'" 3579.319 1 ? ? ? ? 3 polymer man '3-methyladenine DNA glycosylase I, constitutive' 21107.266 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 5 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 6 non-polymer syn 3-METHYL-3H-PURIN-6-YLAMINE 149.153 1 ? ? ? ? 7 water nat water 18.015 159 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name '3-methyladenine DNA glycosylase I' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DC)(DG)(DT)(DT)(DA)(DG)(DT)(DC)(DC)(DG)(DC)' CCGTTAGTCCGC C ? 2 polydeoxyribonucleotide no yes '(DC)(DG)(DG)(DA)(DC)(DT)(3DR)(DA)(DC)(DG)(DG)(DG)' CGGACTNACGGG B ? 3 'polypeptide(L)' no yes ;(MSE)QRCDWVSQDPLYIAYHDNEWGVPETDSRKLFE(MSE)ICLEGQQAGLSWITVLKKRENYRACFHQFDPIRIAA (MSE)QEEDVERLLQNTGIIRHRGKIQAIISNARAWLA(MSE)EQNGESFADFVWSFVDGQPQITQAASLDKIPTSTPAS DALAKALKKRGFKFVGTTICYSF(MSE)QACGLVNDHITGCFCHPG ; ;MQRCDWVSQDPLYIAYHDNEWGVPETDSRKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPIRIAAMQEEDVERLL QNTGIIRHRGKIQAIISNARAWLAMEQNGESFADFVWSFVDGQPQITQAASLDKIPTSTPASDALAKALKKRGFKFVGTT ICYSFMQACGLVNDHITGCFCHPG ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 'SODIUM ION' NA 6 3-METHYL-3H-PURIN-6-YLAMINE ADK 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DG n 1 4 DT n 1 5 DT n 1 6 DA n 1 7 DG n 1 8 DT n 1 9 DC n 1 10 DC n 1 11 DG n 1 12 DC n 2 1 DC n 2 2 DG n 2 3 DG n 2 4 DA n 2 5 DC n 2 6 DT n 2 7 3DR n 2 8 DA n 2 9 DC n 2 10 DG n 2 11 DG n 2 12 DG n 3 1 MSE n 3 2 GLN n 3 3 ARG n 3 4 CYS n 3 5 ASP n 3 6 TRP n 3 7 VAL n 3 8 SER n 3 9 GLN n 3 10 ASP n 3 11 PRO n 3 12 LEU n 3 13 TYR n 3 14 ILE n 3 15 ALA n 3 16 TYR n 3 17 HIS n 3 18 ASP n 3 19 ASN n 3 20 GLU n 3 21 TRP n 3 22 GLY n 3 23 VAL n 3 24 PRO n 3 25 GLU n 3 26 THR n 3 27 ASP n 3 28 SER n 3 29 ARG n 3 30 LYS n 3 31 LEU n 3 32 PHE n 3 33 GLU n 3 34 MSE n 3 35 ILE n 3 36 CYS n 3 37 LEU n 3 38 GLU n 3 39 GLY n 3 40 GLN n 3 41 GLN n 3 42 ALA n 3 43 GLY n 3 44 LEU n 3 45 SER n 3 46 TRP n 3 47 ILE n 3 48 THR n 3 49 VAL n 3 50 LEU n 3 51 LYS n 3 52 LYS n 3 53 ARG n 3 54 GLU n 3 55 ASN n 3 56 TYR n 3 57 ARG n 3 58 ALA n 3 59 CYS n 3 60 PHE n 3 61 HIS n 3 62 GLN n 3 63 PHE n 3 64 ASP n 3 65 PRO n 3 66 ILE n 3 67 ARG n 3 68 ILE n 3 69 ALA n 3 70 ALA n 3 71 MSE n 3 72 GLN n 3 73 GLU n 3 74 GLU n 3 75 ASP n 3 76 VAL n 3 77 GLU n 3 78 ARG n 3 79 LEU n 3 80 LEU n 3 81 GLN n 3 82 ASN n 3 83 THR n 3 84 GLY n 3 85 ILE n 3 86 ILE n 3 87 ARG n 3 88 HIS n 3 89 ARG n 3 90 GLY n 3 91 LYS n 3 92 ILE n 3 93 GLN n 3 94 ALA n 3 95 ILE n 3 96 ILE n 3 97 SER n 3 98 ASN n 3 99 ALA n 3 100 ARG n 3 101 ALA n 3 102 TRP n 3 103 LEU n 3 104 ALA n 3 105 MSE n 3 106 GLU n 3 107 GLN n 3 108 ASN n 3 109 GLY n 3 110 GLU n 3 111 SER n 3 112 PHE n 3 113 ALA n 3 114 ASP n 3 115 PHE n 3 116 VAL n 3 117 TRP n 3 118 SER n 3 119 PHE n 3 120 VAL n 3 121 ASP n 3 122 GLY n 3 123 GLN n 3 124 PRO n 3 125 GLN n 3 126 ILE n 3 127 THR n 3 128 GLN n 3 129 ALA n 3 130 ALA n 3 131 SER n 3 132 LEU n 3 133 ASP n 3 134 LYS n 3 135 ILE n 3 136 PRO n 3 137 THR n 3 138 SER n 3 139 THR n 3 140 PRO n 3 141 ALA n 3 142 SER n 3 143 ASP n 3 144 ALA n 3 145 LEU n 3 146 ALA n 3 147 LYS n 3 148 ALA n 3 149 LEU n 3 150 LYS n 3 151 LYS n 3 152 ARG n 3 153 GLY n 3 154 PHE n 3 155 LYS n 3 156 PHE n 3 157 VAL n 3 158 GLY n 3 159 THR n 3 160 THR n 3 161 ILE n 3 162 CYS n 3 163 TYR n 3 164 SER n 3 165 PHE n 3 166 MSE n 3 167 GLN n 3 168 ALA n 3 169 CYS n 3 170 GLY n 3 171 LEU n 3 172 VAL n 3 173 ASN n 3 174 ASP n 3 175 HIS n 3 176 ILE n 3 177 THR n 3 178 GLY n 3 179 CYS n 3 180 PHE n 3 181 CYS n 3 182 HIS n 3 183 PRO n 3 184 GLY n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Salmonella _entity_src_gen.pdbx_gene_src_gene tag _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Salmonella typhi' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 601 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET19b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 3DR 'DNA linking' . "1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE" 'ABASIC DIDEOXYRIBOSE' 'C5 H11 O6 P' 198.111 ADK non-polymer . 3-METHYL-3H-PURIN-6-YLAMINE 3-METHYLADENINE 'C6 H7 N5' 149.153 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C C . n A 1 2 DC 2 2 2 DC C C . n A 1 3 DG 3 3 3 DG G C . n A 1 4 DT 4 4 4 DT T C . n A 1 5 DT 5 5 5 DT T C . n A 1 6 DA 6 6 6 DA A C . n A 1 7 DG 7 7 7 DG G C . n A 1 8 DT 8 8 8 DT T C . n A 1 9 DC 9 9 9 DC C C . n A 1 10 DC 10 10 10 DC C C . n A 1 11 DG 11 11 11 DG G C . n A 1 12 DC 12 12 12 DC C C . n B 2 1 DC 1 1 1 DC C B . n B 2 2 DG 2 2 2 DG G B . n B 2 3 DG 3 3 3 DG G B . n B 2 4 DA 4 4 4 DA A B . n B 2 5 DC 5 5 5 DC C B . n B 2 6 DT 6 6 6 DT T B . n B 2 7 3DR 7 7 7 3DR 3DR B . n B 2 8 DA 8 8 8 DA A B . n B 2 9 DC 9 9 9 DC C B . n B 2 10 DG 10 10 10 DG G B . n B 2 11 DG 11 11 11 DG G B . n B 2 12 DG 12 12 12 DG G B . n C 3 1 MSE 1 1 1 MSE MSE A . n C 3 2 GLN 2 2 2 GLN GLN A . n C 3 3 ARG 3 3 3 ARG ARG A . n C 3 4 CYS 4 4 4 CYS CYS A . n C 3 5 ASP 5 5 5 ASP ASP A . n C 3 6 TRP 6 6 6 TRP TRP A . n C 3 7 VAL 7 7 7 VAL VAL A . n C 3 8 SER 8 8 8 SER SER A . n C 3 9 GLN 9 9 9 GLN GLN A . n C 3 10 ASP 10 10 10 ASP ASP A . n C 3 11 PRO 11 11 11 PRO PRO A . n C 3 12 LEU 12 12 12 LEU LEU A . n C 3 13 TYR 13 13 13 TYR TYR A . n C 3 14 ILE 14 14 14 ILE ILE A . n C 3 15 ALA 15 15 15 ALA ALA A . n C 3 16 TYR 16 16 16 TYR TYR A . n C 3 17 HIS 17 17 17 HIS HIS A . n C 3 18 ASP 18 18 18 ASP ASP A . n C 3 19 ASN 19 19 19 ASN ASN A . n C 3 20 GLU 20 20 20 GLU GLU A . n C 3 21 TRP 21 21 21 TRP TRP A . n C 3 22 GLY 22 22 22 GLY GLY A . n C 3 23 VAL 23 23 23 VAL VAL A . n C 3 24 PRO 24 24 24 PRO PRO A . n C 3 25 GLU 25 25 25 GLU GLU A . n C 3 26 THR 26 26 26 THR THR A . n C 3 27 ASP 27 27 27 ASP ASP A . n C 3 28 SER 28 28 28 SER SER A . n C 3 29 ARG 29 29 29 ARG ARG A . n C 3 30 LYS 30 30 30 LYS LYS A . n C 3 31 LEU 31 31 31 LEU LEU A . n C 3 32 PHE 32 32 32 PHE PHE A . n C 3 33 GLU 33 33 33 GLU GLU A . n C 3 34 MSE 34 34 34 MSE MSE A . n C 3 35 ILE 35 35 35 ILE ILE A . n C 3 36 CYS 36 36 36 CYS CYS A . n C 3 37 LEU 37 37 37 LEU LEU A . n C 3 38 GLU 38 38 38 GLU GLU A . n C 3 39 GLY 39 39 39 GLY GLY A . n C 3 40 GLN 40 40 40 GLN GLN A . n C 3 41 GLN 41 41 41 GLN GLN A . n C 3 42 ALA 42 42 42 ALA ALA A . n C 3 43 GLY 43 43 43 GLY GLY A . n C 3 44 LEU 44 44 44 LEU LEU A . n C 3 45 SER 45 45 45 SER SER A . n C 3 46 TRP 46 46 46 TRP TRP A . n C 3 47 ILE 47 47 47 ILE ILE A . n C 3 48 THR 48 48 48 THR THR A . n C 3 49 VAL 49 49 49 VAL VAL A . n C 3 50 LEU 50 50 50 LEU LEU A . n C 3 51 LYS 51 51 51 LYS LYS A . n C 3 52 LYS 52 52 52 LYS LYS A . n C 3 53 ARG 53 53 53 ARG ARG A . n C 3 54 GLU 54 54 54 GLU GLU A . n C 3 55 ASN 55 55 55 ASN ASN A . n C 3 56 TYR 56 56 56 TYR TYR A . n C 3 57 ARG 57 57 57 ARG ARG A . n C 3 58 ALA 58 58 58 ALA ALA A . n C 3 59 CYS 59 59 59 CYS CYS A . n C 3 60 PHE 60 60 60 PHE PHE A . n C 3 61 HIS 61 61 61 HIS HIS A . n C 3 62 GLN 62 62 62 GLN GLN A . n C 3 63 PHE 63 63 63 PHE PHE A . n C 3 64 ASP 64 64 64 ASP ASP A . n C 3 65 PRO 65 65 65 PRO PRO A . n C 3 66 ILE 66 66 66 ILE ILE A . n C 3 67 ARG 67 67 67 ARG ARG A . n C 3 68 ILE 68 68 68 ILE ILE A . n C 3 69 ALA 69 69 69 ALA ALA A . n C 3 70 ALA 70 70 70 ALA ALA A . n C 3 71 MSE 71 71 71 MSE MSE A . n C 3 72 GLN 72 72 72 GLN GLN A . n C 3 73 GLU 73 73 73 GLU GLU A . n C 3 74 GLU 74 74 74 GLU GLU A . n C 3 75 ASP 75 75 75 ASP ASP A . n C 3 76 VAL 76 76 76 VAL VAL A . n C 3 77 GLU 77 77 77 GLU GLU A . n C 3 78 ARG 78 78 78 ARG ARG A . n C 3 79 LEU 79 79 79 LEU LEU A . n C 3 80 LEU 80 80 80 LEU LEU A . n C 3 81 GLN 81 81 81 GLN GLN A . n C 3 82 ASN 82 82 82 ASN ASN A . n C 3 83 THR 83 83 83 THR THR A . n C 3 84 GLY 84 84 84 GLY GLY A . n C 3 85 ILE 85 85 85 ILE ILE A . n C 3 86 ILE 86 86 86 ILE ILE A . n C 3 87 ARG 87 87 87 ARG ARG A . n C 3 88 HIS 88 88 88 HIS HIS A . n C 3 89 ARG 89 89 89 ARG ARG A . n C 3 90 GLY 90 90 90 GLY GLY A . n C 3 91 LYS 91 91 91 LYS LYS A . n C 3 92 ILE 92 92 92 ILE ILE A . n C 3 93 GLN 93 93 93 GLN GLN A . n C 3 94 ALA 94 94 94 ALA ALA A . n C 3 95 ILE 95 95 95 ILE ILE A . n C 3 96 ILE 96 96 96 ILE ILE A . n C 3 97 SER 97 97 97 SER SER A . n C 3 98 ASN 98 98 98 ASN ASN A . n C 3 99 ALA 99 99 99 ALA ALA A . n C 3 100 ARG 100 100 100 ARG ARG A . n C 3 101 ALA 101 101 101 ALA ALA A . n C 3 102 TRP 102 102 102 TRP TRP A . n C 3 103 LEU 103 103 103 LEU LEU A . n C 3 104 ALA 104 104 104 ALA ALA A . n C 3 105 MSE 105 105 105 MSE MSE A . n C 3 106 GLU 106 106 106 GLU GLU A . n C 3 107 GLN 107 107 107 GLN GLN A . n C 3 108 ASN 108 108 108 ASN ASN A . n C 3 109 GLY 109 109 109 GLY GLY A . n C 3 110 GLU 110 110 110 GLU GLU A . n C 3 111 SER 111 111 111 SER SER A . n C 3 112 PHE 112 112 112 PHE PHE A . n C 3 113 ALA 113 113 113 ALA ALA A . n C 3 114 ASP 114 114 114 ASP ASP A . n C 3 115 PHE 115 115 115 PHE PHE A . n C 3 116 VAL 116 116 116 VAL VAL A . n C 3 117 TRP 117 117 117 TRP TRP A . n C 3 118 SER 118 118 118 SER SER A . n C 3 119 PHE 119 119 119 PHE PHE A . n C 3 120 VAL 120 120 120 VAL VAL A . n C 3 121 ASP 121 121 121 ASP ASP A . n C 3 122 GLY 122 122 122 GLY GLY A . n C 3 123 GLN 123 123 123 GLN GLN A . n C 3 124 PRO 124 124 124 PRO PRO A . n C 3 125 GLN 125 125 125 GLN GLN A . n C 3 126 ILE 126 126 126 ILE ILE A . n C 3 127 THR 127 127 127 THR THR A . n C 3 128 GLN 128 128 128 GLN GLN A . n C 3 129 ALA 129 129 129 ALA ALA A . n C 3 130 ALA 130 130 130 ALA ALA A . n C 3 131 SER 131 131 131 SER SER A . n C 3 132 LEU 132 132 132 LEU LEU A . n C 3 133 ASP 133 133 133 ASP ASP A . n C 3 134 LYS 134 134 134 LYS LYS A . n C 3 135 ILE 135 135 135 ILE ILE A . n C 3 136 PRO 136 136 136 PRO PRO A . n C 3 137 THR 137 137 137 THR THR A . n C 3 138 SER 138 138 138 SER SER A . n C 3 139 THR 139 139 139 THR THR A . n C 3 140 PRO 140 140 140 PRO PRO A . n C 3 141 ALA 141 141 141 ALA ALA A . n C 3 142 SER 142 142 142 SER SER A . n C 3 143 ASP 143 143 143 ASP ASP A . n C 3 144 ALA 144 144 144 ALA ALA A . n C 3 145 LEU 145 145 145 LEU LEU A . n C 3 146 ALA 146 146 146 ALA ALA A . n C 3 147 LYS 147 147 147 LYS LYS A . n C 3 148 ALA 148 148 148 ALA ALA A . n C 3 149 LEU 149 149 149 LEU LEU A . n C 3 150 LYS 150 150 150 LYS LYS A . n C 3 151 LYS 151 151 151 LYS LYS A . n C 3 152 ARG 152 152 152 ARG ARG A . n C 3 153 GLY 153 153 153 GLY GLY A . n C 3 154 PHE 154 154 154 PHE PHE A . n C 3 155 LYS 155 155 155 LYS LYS A . n C 3 156 PHE 156 156 156 PHE PHE A . n C 3 157 VAL 157 157 157 VAL VAL A . n C 3 158 GLY 158 158 158 GLY GLY A . n C 3 159 THR 159 159 159 THR THR A . n C 3 160 THR 160 160 160 THR THR A . n C 3 161 ILE 161 161 161 ILE ILE A . n C 3 162 CYS 162 162 162 CYS CYS A . n C 3 163 TYR 163 163 163 TYR TYR A . n C 3 164 SER 164 164 164 SER SER A . n C 3 165 PHE 165 165 165 PHE PHE A . n C 3 166 MSE 166 166 166 MSE MSE A . n C 3 167 GLN 167 167 167 GLN GLN A . n C 3 168 ALA 168 168 168 ALA ALA A . n C 3 169 CYS 169 169 169 CYS CYS A . n C 3 170 GLY 170 170 170 GLY GLY A . n C 3 171 LEU 171 171 171 LEU LEU A . n C 3 172 VAL 172 172 172 VAL VAL A . n C 3 173 ASN 173 173 173 ASN ASN A . n C 3 174 ASP 174 174 174 ASP ASP A . n C 3 175 HIS 175 175 175 HIS HIS A . n C 3 176 ILE 176 176 176 ILE ILE A . n C 3 177 THR 177 177 177 THR THR A . n C 3 178 GLY 178 178 178 GLY GLY A . n C 3 179 CYS 179 179 179 CYS CYS A . n C 3 180 PHE 180 180 180 PHE PHE A . n C 3 181 CYS 181 181 181 CYS CYS A . n C 3 182 HIS 182 182 182 HIS HIS A . n C 3 183 PRO 183 183 183 PRO PRO A . n C 3 184 GLY 184 184 184 GLY GLY A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN 1 302 302 ZN ZN A . E 5 NA 1 206 206 NA NA A . F 6 ADK 1 301 301 ADK ADK A . G 7 HOH 1 13 9 HOH HOH C . G 7 HOH 2 14 89 HOH HOH C . G 7 HOH 3 15 99 HOH HOH C . G 7 HOH 4 16 116 HOH HOH C . G 7 HOH 5 17 124 HOH HOH C . G 7 HOH 6 18 159 HOH HOH C . G 7 HOH 7 19 184 HOH HOH C . G 7 HOH 8 20 186 HOH HOH C . G 7 HOH 9 21 222 HOH HOH C . H 7 HOH 1 29 29 HOH HOH B . H 7 HOH 2 37 37 HOH HOH B . H 7 HOH 3 46 46 HOH HOH B . H 7 HOH 4 48 48 HOH HOH B . H 7 HOH 5 64 64 HOH HOH B . H 7 HOH 6 71 71 HOH HOH B . H 7 HOH 7 88 88 HOH HOH B . H 7 HOH 8 105 105 HOH HOH B . H 7 HOH 9 134 134 HOH HOH B . H 7 HOH 10 138 138 HOH HOH B . H 7 HOH 11 153 153 HOH HOH B . H 7 HOH 12 166 166 HOH HOH B . H 7 HOH 13 180 180 HOH HOH B . H 7 HOH 14 194 194 HOH HOH B . H 7 HOH 15 197 197 HOH HOH B . H 7 HOH 16 201 201 HOH HOH B . H 7 HOH 17 220 220 HOH HOH B . H 7 HOH 18 221 221 HOH HOH B . H 7 HOH 19 224 224 HOH HOH B . I 7 HOH 1 303 1 HOH HOH A . I 7 HOH 2 304 2 HOH HOH A . I 7 HOH 3 305 3 HOH HOH A . I 7 HOH 4 306 6 HOH HOH A . I 7 HOH 5 307 7 HOH HOH A . I 7 HOH 6 308 8 HOH HOH A . I 7 HOH 7 309 10 HOH HOH A . I 7 HOH 8 310 11 HOH HOH A . I 7 HOH 9 311 12 HOH HOH A . I 7 HOH 10 312 13 HOH HOH A . I 7 HOH 11 313 16 HOH HOH A . I 7 HOH 12 314 17 HOH HOH A . I 7 HOH 13 315 18 HOH HOH A . I 7 HOH 14 316 19 HOH HOH A . I 7 HOH 15 317 14 HOH HOH A . I 7 HOH 16 318 20 HOH HOH A . I 7 HOH 17 319 22 HOH HOH A . I 7 HOH 18 320 23 HOH HOH A . I 7 HOH 19 321 24 HOH HOH A . I 7 HOH 20 322 25 HOH HOH A . I 7 HOH 21 323 26 HOH HOH A . I 7 HOH 22 324 27 HOH HOH A . I 7 HOH 23 325 30 HOH HOH A . I 7 HOH 24 326 33 HOH HOH A . I 7 HOH 25 327 34 HOH HOH A . I 7 HOH 26 328 35 HOH HOH A . I 7 HOH 27 329 39 HOH HOH A . I 7 HOH 28 330 40 HOH HOH A . I 7 HOH 29 331 42 HOH HOH A . I 7 HOH 30 332 43 HOH HOH A . I 7 HOH 31 333 45 HOH HOH A . I 7 HOH 32 334 47 HOH HOH A . I 7 HOH 33 335 49 HOH HOH A . I 7 HOH 34 336 50 HOH HOH A . I 7 HOH 35 337 51 HOH HOH A . I 7 HOH 36 338 52 HOH HOH A . I 7 HOH 37 339 53 HOH HOH A . I 7 HOH 38 340 54 HOH HOH A . I 7 HOH 39 341 55 HOH HOH A . I 7 HOH 40 342 56 HOH HOH A . I 7 HOH 41 343 57 HOH HOH A . I 7 HOH 42 344 59 HOH HOH A . I 7 HOH 43 345 60 HOH HOH A . I 7 HOH 44 346 62 HOH HOH A . I 7 HOH 45 347 63 HOH HOH A . I 7 HOH 46 348 66 HOH HOH A . I 7 HOH 47 349 68 HOH HOH A . I 7 HOH 48 350 69 HOH HOH A . I 7 HOH 49 351 72 HOH HOH A . I 7 HOH 50 352 74 HOH HOH A . I 7 HOH 51 353 76 HOH HOH A . I 7 HOH 52 354 77 HOH HOH A . I 7 HOH 53 355 78 HOH HOH A . I 7 HOH 54 356 79 HOH HOH A . I 7 HOH 55 357 81 HOH HOH A . I 7 HOH 56 358 82 HOH HOH A . I 7 HOH 57 359 83 HOH HOH A . I 7 HOH 58 360 84 HOH HOH A . I 7 HOH 59 361 85 HOH HOH A . I 7 HOH 60 362 90 HOH HOH A . I 7 HOH 61 363 92 HOH HOH A . I 7 HOH 62 364 93 HOH HOH A . I 7 HOH 63 365 94 HOH HOH A . I 7 HOH 64 366 95 HOH HOH A . I 7 HOH 65 367 96 HOH HOH A . I 7 HOH 66 368 101 HOH HOH A . I 7 HOH 67 369 102 HOH HOH A . I 7 HOH 68 370 103 HOH HOH A . I 7 HOH 69 371 104 HOH HOH A . I 7 HOH 70 372 108 HOH HOH A . I 7 HOH 71 373 109 HOH HOH A . I 7 HOH 72 374 111 HOH HOH A . I 7 HOH 73 375 112 HOH HOH A . I 7 HOH 74 376 113 HOH HOH A . I 7 HOH 75 377 118 HOH HOH A . I 7 HOH 76 378 120 HOH HOH A . I 7 HOH 77 379 123 HOH HOH A . I 7 HOH 78 380 126 HOH HOH A . I 7 HOH 79 381 127 HOH HOH A . I 7 HOH 80 382 129 HOH HOH A . I 7 HOH 81 383 136 HOH HOH A . I 7 HOH 82 384 140 HOH HOH A . I 7 HOH 83 385 143 HOH HOH A . I 7 HOH 84 386 146 HOH HOH A . I 7 HOH 85 387 147 HOH HOH A . I 7 HOH 86 388 149 HOH HOH A . I 7 HOH 87 389 150 HOH HOH A . I 7 HOH 88 390 151 HOH HOH A . I 7 HOH 89 391 154 HOH HOH A . I 7 HOH 90 392 158 HOH HOH A . I 7 HOH 91 393 160 HOH HOH A . I 7 HOH 92 394 162 HOH HOH A . I 7 HOH 93 395 168 HOH HOH A . I 7 HOH 94 396 169 HOH HOH A . I 7 HOH 95 397 179 HOH HOH A . I 7 HOH 96 398 181 HOH HOH A . I 7 HOH 97 399 182 HOH HOH A . I 7 HOH 98 400 183 HOH HOH A . I 7 HOH 99 401 185 HOH HOH A . I 7 HOH 100 402 187 HOH HOH A . I 7 HOH 101 403 188 HOH HOH A . I 7 HOH 102 404 189 HOH HOH A . I 7 HOH 103 405 190 HOH HOH A . I 7 HOH 104 406 191 HOH HOH A . I 7 HOH 105 407 192 HOH HOH A . I 7 HOH 106 408 193 HOH HOH A . I 7 HOH 107 409 195 HOH HOH A . I 7 HOH 108 410 196 HOH HOH A . I 7 HOH 109 411 198 HOH HOH A . I 7 HOH 110 412 199 HOH HOH A . I 7 HOH 111 413 200 HOH HOH A . I 7 HOH 112 414 202 HOH HOH A . I 7 HOH 113 415 203 HOH HOH A . I 7 HOH 114 416 204 HOH HOH A . I 7 HOH 115 417 205 HOH HOH A . I 7 HOH 116 418 207 HOH HOH A . I 7 HOH 117 419 208 HOH HOH A . I 7 HOH 118 420 209 HOH HOH A . I 7 HOH 119 421 210 HOH HOH A . I 7 HOH 120 422 211 HOH HOH A . I 7 HOH 121 423 212 HOH HOH A . I 7 HOH 122 424 213 HOH HOH A . I 7 HOH 123 425 214 HOH HOH A . I 7 HOH 124 426 215 HOH HOH A . I 7 HOH 125 427 216 HOH HOH A . I 7 HOH 126 428 217 HOH HOH A . I 7 HOH 127 429 218 HOH HOH A . I 7 HOH 128 430 219 HOH HOH A . I 7 HOH 129 431 223 HOH HOH A . I 7 HOH 130 432 225 HOH HOH A . I 7 HOH 131 433 226 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 2 ? CG ? C GLN 2 CG 2 1 Y 1 A GLN 2 ? CD ? C GLN 2 CD 3 1 Y 1 A GLN 2 ? OE1 ? C GLN 2 OE1 4 1 Y 1 A GLN 2 ? NE2 ? C GLN 2 NE2 5 1 Y 1 A GLU 73 ? CG ? C GLU 73 CG 6 1 Y 1 A GLU 73 ? CD ? C GLU 73 CD 7 1 Y 1 A GLU 73 ? OE1 ? C GLU 73 OE1 8 1 Y 1 A GLU 73 ? OE2 ? C GLU 73 OE2 9 1 Y 1 A GLU 74 ? CG ? C GLU 74 CG 10 1 Y 1 A GLU 74 ? CD ? C GLU 74 CD 11 1 Y 1 A GLU 74 ? OE1 ? C GLU 74 OE1 12 1 Y 1 A GLU 74 ? OE2 ? C GLU 74 OE2 13 1 Y 1 A ASN 108 ? CG ? C ASN 108 CG 14 1 Y 1 A ASN 108 ? OD1 ? C ASN 108 OD1 15 1 Y 1 A ASN 108 ? ND2 ? C ASN 108 ND2 16 1 Y 1 A ASP 121 ? CG ? C ASP 121 CG 17 1 Y 1 A ASP 121 ? OD1 ? C ASP 121 OD1 18 1 Y 1 A ASP 121 ? OD2 ? C ASP 121 OD2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 SERGUI 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 SOLVE phasing . ? 5 # _cell.entry_id 2OFI _cell.length_a 101.963 _cell.length_b 101.963 _cell.length_c 55.461 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2OFI _symmetry.space_group_name_H-M 'P 63' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2OFI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.91 _exptl_crystal.density_percent_sol 57.71 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '2M ammonium sulfate, 2% PEG 400, 100 mM HEPES pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 294K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'ammonium sulfate' ? ? ? 1 2 1 PEG ? ? ? 1 3 1 HEPES ? ? ? 1 4 1 H2O ? ? ? 1 5 2 'ammonium sulfate' ? ? ? 1 6 2 PEG ? ? ? 1 7 2 HEPES ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2005-12-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9793 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9793 # _reflns.entry_id 2OFI _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 1.85 _reflns.d_resolution_low 50 _reflns.number_all ? _reflns.number_obs 28261 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.053 _reflns.pdbx_netI_over_sigmaI 27.2 _reflns.B_iso_Wilson_estimate 28.1 _reflns.pdbx_redundancy 6.4 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.85 _reflns_shell.d_res_low 1.92 _reflns_shell.percent_possible_all 97.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.433 _reflns_shell.meanI_over_sigI_obs 3.4 _reflns_shell.pdbx_redundancy 5.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 5415 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2OFI _refine.ls_number_reflns_obs 26778 _refine.ls_number_reflns_all 28215 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 1.85 _refine.ls_percent_reflns_obs 99.93 _refine.ls_R_factor_obs 0.17666 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17555 _refine.ls_R_factor_R_free 0.19784 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1420 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.963 _refine.correlation_coeff_Fo_to_Fc_free 0.955 _refine.B_iso_mean 34.364 _refine.aniso_B[1][1] 0.01 _refine.aniso_B[2][2] 0.01 _refine.aniso_B[3][3] -0.01 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.113 _refine.pdbx_overall_ESU_R_Free 0.105 _refine.overall_SU_ML 0.069 _refine.overall_SU_B 4.423 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1445 _refine_hist.pdbx_number_atoms_nucleic_acid 476 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 159 _refine_hist.number_atoms_total 2093 _refine_hist.d_res_high 1.85 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.018 0.021 ? 2068 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.868 2.257 ? 2898 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.194 5.000 ? 183 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.463 23.623 ? 69 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.802 15.000 ? 249 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.152 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.113 0.200 ? 313 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.020 ? 1399 'X-RAY DIFFRACTION' ? r_nbd_refined 0.200 0.200 ? 890 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.309 0.200 ? 1356 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.134 0.200 ? 139 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.266 0.200 ? 1 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.129 0.200 ? 30 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.110 0.200 ? 23 'X-RAY DIFFRACTION' ? r_mcbond_it 1.027 1.500 ? 916 'X-RAY DIFFRACTION' ? r_mcangle_it 1.781 2.000 ? 1464 'X-RAY DIFFRACTION' ? r_scbond_it 2.662 3.000 ? 1294 'X-RAY DIFFRACTION' ? r_scangle_it 3.735 4.500 ? 1434 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 1.850 _refine_ls_shell.d_res_low 1.950 _refine_ls_shell.number_reflns_R_work 3856 _refine_ls_shell.R_factor_R_work 0.2 _refine_ls_shell.percent_reflns_obs 99.75 _refine_ls_shell.R_factor_R_free 0.239 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 199 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2OFI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2OFI _struct.title 'Crystal Structure of 3-methyladenine DNA Glycosylase I (TAG) bound to DNA/3mA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2OFI _struct_keywords.pdbx_keywords '3-METHYLADENINE DNA GLYCOSYLASE I/DNA' _struct_keywords.text '3-Methyladenine, DNA repair, Glycosylase, Base Excision, Helix-hairpin-Helix, 3-METHYLADENINE DNA GLYCOSYLASE I-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 7 ? I N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q8Z2A5_SALTI Q8Z2A5 3 ;MQRCDWVSQDPLYIAYHDNEWGVPETDSRKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPIRIAAMQEEDVERLL QNTGIIRHRGKIQAIISNARAWLAMEQNGESFADFVWSFVDGQPQITQAASLDKIPTSTPASDALAKALKKRGFKFVGTT ICYSFMQACGLVNDHITGCFCHPG ; 1 ? 2 PDB 2OFI 2OFI 1 ? ? ? 3 PDB 2OFI 2OFI 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2OFI A 1 ? 184 ? Q8Z2A5 1 ? 184 ? 1 184 2 2 2OFI C 1 ? 12 ? 2OFI 1 ? 12 ? 1 12 3 3 2OFI B 1 ? 12 ? 2OFI 1 ? 12 ? 1 12 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2OFI MSE A 1 ? UNP Q8Z2A5 MET 1 'modified residue' 1 1 1 2OFI MSE A 34 ? UNP Q8Z2A5 MET 34 'modified residue' 34 2 1 2OFI MSE A 71 ? UNP Q8Z2A5 MET 71 'modified residue' 71 3 1 2OFI MSE A 105 ? UNP Q8Z2A5 MET 105 'modified residue' 105 4 1 2OFI MSE A 166 ? UNP Q8Z2A5 MET 166 'modified residue' 166 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP C 10 ? GLU C 20 ? ASP A 10 GLU A 20 1 ? 11 HELX_P HELX_P2 2 ASP C 27 ? GLN C 41 ? ASP A 27 GLN A 41 1 ? 15 HELX_P HELX_P3 3 SER C 45 ? LYS C 52 ? SER A 45 LYS A 52 1 ? 8 HELX_P HELX_P4 4 LYS C 52 ? PHE C 60 ? LYS A 52 PHE A 60 1 ? 9 HELX_P HELX_P5 5 HIS C 61 ? PHE C 63 ? HIS A 61 PHE A 63 5 ? 3 HELX_P HELX_P6 6 ASP C 64 ? ALA C 70 ? ASP A 64 ALA A 70 1 ? 7 HELX_P HELX_P7 7 GLN C 72 ? LEU C 80 ? GLN A 72 LEU A 80 1 ? 9 HELX_P HELX_P8 8 HIS C 88 ? GLN C 107 ? HIS A 88 GLN A 107 1 ? 20 HELX_P HELX_P9 9 SER C 111 ? SER C 118 ? SER A 111 SER A 118 1 ? 8 HELX_P HELX_P10 10 SER C 131 ? ILE C 135 ? SER A 131 ILE A 135 5 ? 5 HELX_P HELX_P11 11 THR C 139 ? ARG C 152 ? THR A 139 ARG A 152 1 ? 14 HELX_P HELX_P12 12 GLY C 158 ? CYS C 169 ? GLY A 158 CYS A 169 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DT 6 "O3'" B ? ? 1_555 B 3DR 7 P B ? B DT 6 B 3DR 7 1_555 ? ? ? ? ? ? ? 1.613 ? ? covale2 covale both ? B DT 6 "O3'" A ? ? 1_555 B 3DR 7 P A ? B DT 6 B 3DR 7 1_555 ? ? ? ? ? ? ? 1.600 ? ? covale3 covale both ? B 3DR 7 "O3'" B ? ? 1_555 B DA 8 P ? ? B 3DR 7 B DA 8 1_555 ? ? ? ? ? ? ? 1.594 ? ? covale4 covale both ? B 3DR 7 "O3'" A ? ? 1_555 B DA 8 P ? ? B 3DR 7 B DA 8 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale5 covale both ? C MSE 1 C ? ? ? 1_555 C GLN 2 N ? ? A MSE 1 A GLN 2 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale6 covale both ? C GLU 33 C ? ? ? 1_555 C MSE 34 N ? ? A GLU 33 A MSE 34 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale7 covale both ? C MSE 34 C ? ? ? 1_555 C ILE 35 N ? ? A MSE 34 A ILE 35 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale8 covale both ? C ALA 70 C ? ? ? 1_555 C MSE 71 N ? ? A ALA 70 A MSE 71 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale9 covale both ? C MSE 71 C ? ? ? 1_555 C GLN 72 N ? ? A MSE 71 A GLN 72 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale10 covale both ? C ALA 104 C ? ? ? 1_555 C MSE 105 N ? ? A ALA 104 A MSE 105 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale11 covale both ? C MSE 105 C ? ? ? 1_555 C GLU 106 N ? ? A MSE 105 A GLU 106 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale12 covale both ? C PHE 165 C ? ? ? 1_555 C MSE 166 N ? ? A PHE 165 A MSE 166 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale13 covale both ? C MSE 166 C ? ? ? 1_555 C GLN 167 N ? ? A MSE 166 A GLN 167 1_555 ? ? ? ? ? ? ? 1.342 ? ? metalc1 metalc ? ? C CYS 4 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 4 A ZN 302 1_555 ? ? ? ? ? ? ? 2.275 ? ? metalc2 metalc ? ? C HIS 17 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 17 A ZN 302 1_555 ? ? ? ? ? ? ? 2.093 ? ? metalc3 metalc ? ? C TRP 117 O ? ? ? 1_555 E NA . NA ? ? A TRP 117 A NA 206 1_555 ? ? ? ? ? ? ? 2.255 ? ? metalc4 metalc ? ? C VAL 120 O ? ? ? 1_555 E NA . NA ? ? A VAL 120 A NA 206 1_555 ? ? ? ? ? ? ? 2.248 ? ? metalc5 metalc ? ? C HIS 175 ND1 ? ? ? 1_555 D ZN . ZN ? ? A HIS 175 A ZN 302 1_555 ? ? ? ? ? ? ? 2.084 ? ? metalc6 metalc ? ? C CYS 179 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 179 A ZN 302 1_555 ? ? ? ? ? ? ? 2.277 ? ? metalc7 metalc ? ? E NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 206 A HOH 417 1_555 ? ? ? ? ? ? ? 2.827 ? ? metalc8 metalc ? ? E NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 206 A HOH 418 1_555 ? ? ? ? ? ? ? 2.144 ? ? metalc9 metalc ? ? E NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 206 A HOH 419 1_555 ? ? ? ? ? ? ? 2.572 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 11 N1 ? ? C DC 1 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 11 O6 ? ? C DC 1 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 11 N2 ? ? C DC 1 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 10 N1 ? ? C DC 2 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 10 O6 ? ? C DC 2 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 10 N2 ? ? C DC 2 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 9 N3 ? ? C DG 3 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 9 O2 ? ? C DG 3 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 9 N4 ? ? C DG 3 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 8 N1 ? ? C DT 4 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 8 N6 ? ? C DT 4 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 6 N3 A ? C DA 6 B DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 6 O4 A ? C DA 6 B DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 5 N3 ? ? C DG 7 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 5 O2 ? ? C DG 7 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 5 N4 ? ? C DG 7 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 4 N1 ? ? C DT 8 B DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 4 N6 ? ? C DT 8 B DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 3 N1 ? ? C DC 9 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 3 O6 ? ? C DC 9 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 3 N2 ? ? C DC 9 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 2 N1 ? ? C DC 10 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 2 O6 ? ? C DC 10 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 2 N2 ? ? C DC 10 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 1 N3 ? ? C DG 11 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DC 1 O2 ? ? C DG 11 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DC 1 N4 ? ? C DG 11 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? C CYS 4 ? A CYS 4 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 NE2 ? C HIS 17 ? A HIS 17 ? 1_555 116.0 ? 2 SG ? C CYS 4 ? A CYS 4 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 ND1 ? C HIS 175 ? A HIS 175 ? 1_555 107.8 ? 3 NE2 ? C HIS 17 ? A HIS 17 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 ND1 ? C HIS 175 ? A HIS 175 ? 1_555 102.5 ? 4 SG ? C CYS 4 ? A CYS 4 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 SG ? C CYS 179 ? A CYS 179 ? 1_555 118.9 ? 5 NE2 ? C HIS 17 ? A HIS 17 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 SG ? C CYS 179 ? A CYS 179 ? 1_555 98.5 ? 6 ND1 ? C HIS 175 ? A HIS 175 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 SG ? C CYS 179 ? A CYS 179 ? 1_555 111.8 ? 7 O ? C TRP 117 ? A TRP 117 ? 1_555 NA ? E NA . ? A NA 206 ? 1_555 O ? C VAL 120 ? A VAL 120 ? 1_555 91.7 ? 8 O ? C TRP 117 ? A TRP 117 ? 1_555 NA ? E NA . ? A NA 206 ? 1_555 O ? I HOH . ? A HOH 417 ? 1_555 87.9 ? 9 O ? C VAL 120 ? A VAL 120 ? 1_555 NA ? E NA . ? A NA 206 ? 1_555 O ? I HOH . ? A HOH 417 ? 1_555 171.4 ? 10 O ? C TRP 117 ? A TRP 117 ? 1_555 NA ? E NA . ? A NA 206 ? 1_555 O ? I HOH . ? A HOH 418 ? 1_555 112.9 ? 11 O ? C VAL 120 ? A VAL 120 ? 1_555 NA ? E NA . ? A NA 206 ? 1_555 O ? I HOH . ? A HOH 418 ? 1_555 100.2 ? 12 O ? I HOH . ? A HOH 417 ? 1_555 NA ? E NA . ? A NA 206 ? 1_555 O ? I HOH . ? A HOH 418 ? 1_555 87.8 ? 13 O ? C TRP 117 ? A TRP 117 ? 1_555 NA ? E NA . ? A NA 206 ? 1_555 O ? I HOH . ? A HOH 419 ? 1_555 164.3 ? 14 O ? C VAL 120 ? A VAL 120 ? 1_555 NA ? E NA . ? A NA 206 ? 1_555 O ? I HOH . ? A HOH 419 ? 1_555 81.0 ? 15 O ? I HOH . ? A HOH 417 ? 1_555 NA ? E NA . ? A NA 206 ? 1_555 O ? I HOH . ? A HOH 419 ? 1_555 97.3 ? 16 O ? I HOH . ? A HOH 418 ? 1_555 NA ? E NA . ? A NA 206 ? 1_555 O ? I HOH . ? A HOH 419 ? 1_555 82.2 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE C 1 ? . . . . MSE A 1 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE C 34 ? . . . . MSE A 34 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE C 71 ? . . . . MSE A 71 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE C 105 ? . . . . MSE A 105 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 5 MSE C 166 ? . . . . MSE A 166 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN C 125 ? ILE C 126 ? GLN A 125 ILE A 126 A 2 VAL C 172 ? ASN C 173 ? VAL A 172 ASN A 173 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id GLN _pdbx_struct_sheet_hbond.range_1_label_asym_id C _pdbx_struct_sheet_hbond.range_1_label_seq_id 125 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id GLN _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 125 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ASN _pdbx_struct_sheet_hbond.range_2_label_asym_id C _pdbx_struct_sheet_hbond.range_2_label_seq_id 173 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ASN _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 173 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 302 ? 4 'BINDING SITE FOR RESIDUE ZN A 302' AC2 Software A NA 206 ? 5 'BINDING SITE FOR RESIDUE NA A 206' AC3 Software A ADK 301 ? 7 'BINDING SITE FOR RESIDUE ADK A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS C 4 ? CYS A 4 . ? 1_555 ? 2 AC1 4 HIS C 17 ? HIS A 17 . ? 1_555 ? 3 AC1 4 HIS C 175 ? HIS A 175 . ? 1_555 ? 4 AC1 4 CYS C 179 ? CYS A 179 . ? 1_555 ? 5 AC2 5 TRP C 117 ? TRP A 117 . ? 1_555 ? 6 AC2 5 VAL C 120 ? VAL A 120 . ? 1_555 ? 7 AC2 5 HOH I . ? HOH A 417 . ? 1_555 ? 8 AC2 5 HOH I . ? HOH A 418 . ? 1_555 ? 9 AC2 5 HOH I . ? HOH A 419 . ? 1_555 ? 10 AC3 7 TYR C 13 ? TYR A 13 . ? 1_555 ? 11 AC3 7 TYR C 16 ? TYR A 16 . ? 1_555 ? 12 AC3 7 TRP C 21 ? TRP A 21 . ? 1_555 ? 13 AC3 7 GLU C 38 ? GLU A 38 . ? 1_555 ? 14 AC3 7 TRP C 46 ? TRP A 46 . ? 1_555 ? 15 AC3 7 ALA C 168 ? ALA A 168 . ? 1_555 ? 16 AC3 7 HOH I . ? HOH A 309 . ? 1_555 ? # _pdbx_entry_details.entry_id 2OFI _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" C DC 2 ? ? "C3'" C DC 2 ? ? 1.358 1.419 -0.061 0.006 N 2 1 N1 B DT 6 ? A C2 B DT 6 ? A 1.511 1.376 0.135 0.008 N 3 1 N1 B DT 6 ? B C2 B DT 6 ? B 1.436 1.376 0.060 0.008 N 4 1 N3 B DT 6 ? A C4 B DT 6 ? A 1.475 1.382 0.093 0.008 N 5 1 C4 B DT 6 ? A C5 B DT 6 ? A 1.565 1.445 0.120 0.009 N 6 1 C6 B DT 6 ? A N1 B DT 6 ? A 1.473 1.378 0.095 0.007 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DC 1 ? ? "C1'" C DC 1 ? ? N1 C DC 1 ? ? 111.00 108.30 2.70 0.30 N 2 1 "O4'" C DC 2 ? ? "C1'" C DC 2 ? ? N1 C DC 2 ? ? 111.08 108.30 2.78 0.30 N 3 1 "O4'" C DT 4 ? ? "C4'" C DT 4 ? ? "C3'" C DT 4 ? ? 100.97 104.50 -3.53 0.40 N 4 1 OP1 C DT 5 ? ? P C DT 5 ? ? OP2 C DT 5 ? ? 129.35 119.60 9.75 1.50 N 5 1 C2 C DT 5 ? ? N3 C DT 5 ? ? C4 C DT 5 ? ? 123.44 127.20 -3.76 0.60 N 6 1 "O5'" C DA 6 ? ? P C DA 6 ? ? OP2 C DA 6 ? ? 100.22 105.70 -5.48 0.90 N 7 1 "O4'" C DA 6 ? ? "C1'" C DA 6 ? ? N9 C DA 6 ? ? 103.68 108.00 -4.32 0.70 N 8 1 "O4'" C DC 9 ? ? "C1'" C DC 9 ? ? N1 C DC 9 ? ? 112.08 108.30 3.78 0.30 N 9 1 "O4'" C DC 10 ? ? "C1'" C DC 10 ? ? N1 C DC 10 ? ? 110.33 108.30 2.03 0.30 N 10 1 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 111.58 108.30 3.28 0.30 N 11 1 "C3'" B DC 5 ? ? "O3'" B DC 5 ? ? P B DT 6 ? B 128.19 119.70 8.49 1.20 Y 12 1 "O4'" B DT 6 ? A "C4'" B DT 6 ? A "C3'" B DT 6 ? A 101.85 104.50 -2.65 0.40 N 13 1 "O4'" B DT 6 ? A "C1'" B DT 6 ? A N1 B DT 6 ? A 112.37 108.30 4.07 0.30 N 14 1 C6 B DT 6 ? A N1 B DT 6 ? A C2 B DT 6 ? A 124.47 121.30 3.17 0.50 N 15 1 N3 B DT 6 ? A C4 B DT 6 ? A C5 B DT 6 ? A 119.73 115.20 4.53 0.60 N 16 1 C4 B DT 6 ? A C5 B DT 6 ? A C7 B DT 6 ? A 114.99 119.00 -4.01 0.60 N 17 1 "C3'" B 3DR 7 ? A "O3'" B 3DR 7 ? A P B DA 8 ? ? 128.43 119.70 8.73 1.20 Y 18 1 "O4'" B DA 8 ? ? "C1'" B DA 8 ? ? N9 B DA 8 ? ? 110.32 108.30 2.02 0.30 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ILE _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 85 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -120.53 _pdbx_validate_torsion.psi -168.31 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 C MSE 1 A MSE 1 ? MET SELENOMETHIONINE 2 C MSE 34 A MSE 34 ? MET SELENOMETHIONINE 3 C MSE 71 A MSE 71 ? MET SELENOMETHIONINE 4 C MSE 105 A MSE 105 ? MET SELENOMETHIONINE 5 C MSE 166 A MSE 166 ? MET SELENOMETHIONINE # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 0.2607 39.2014 44.4867 -0.0447 -0.0947 -0.0594 -0.0023 -0.0080 -0.0054 1.4089 1.5855 1.1416 0.4856 0.4102 0.3460 -0.0656 0.0333 -0.0202 -0.1294 0.0498 -0.0163 -0.0632 0.0495 0.0158 'X-RAY DIFFRACTION' 2 ? refined -3.3918 22.9521 66.7230 0.0486 0.0555 -0.0729 -0.1405 0.2712 -0.0085 5.5603 7.6087 14.5736 5.9924 -7.1330 -8.4732 -1.2156 0.6243 -0.3053 -1.0795 0.4198 -0.1156 1.7472 -1.0122 0.7958 'X-RAY DIFFRACTION' 3 ? refined 11.1771 23.2714 52.9345 -0.0108 -0.0054 0.0586 0.0037 -0.0062 -0.0114 2.4780 1.4483 3.2479 -0.6856 1.5358 -1.1383 -0.0870 0.0375 -0.1601 0.1238 -0.0345 -0.0452 0.0235 0.0020 0.1215 'X-RAY DIFFRACTION' 4 ? refined -2.0195 25.2885 51.5295 -0.0023 0.0013 0.0055 -0.0108 0.0114 -0.0034 56.6938 65.8232 77.6847 23.0752 58.5635 -7.3092 0.8613 -1.6050 -0.0834 -1.3532 1.4957 0.1428 0.8839 -2.5872 -2.3570 'X-RAY DIFFRACTION' 5 ? refined 5.3952 30.6383 59.7261 0.0254 -0.0029 -0.0021 0.0051 0.0003 0.0427 0.9122 15.1879 22.7490 0.7449 -0.2015 18.0294 0.0227 0.0349 -0.8082 0.3660 0.3099 -0.0880 0.5739 0.5128 -0.3326 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 1 C 1 A 184 C 184 ? 'X-RAY DIFFRACTION' ? 2 1 A 302 D 1 A 302 D 1 ? 'X-RAY DIFFRACTION' ? 3 1 A 301 F 1 A 301 F 1 ? 'X-RAY DIFFRACTION' ? 4 2 B 1 B 1 B 6 B 6 ? 'X-RAY DIFFRACTION' ? 5 2 C 6 A 6 C 12 A 12 ? 'X-RAY DIFFRACTION' ? 6 3 B 8 B 8 B 12 B 12 ? 'X-RAY DIFFRACTION' ? 7 3 C 1 A 1 C 4 A 4 ? 'X-RAY DIFFRACTION' ? 8 4 B 7 B 7 B 7 B 7 ? 'X-RAY DIFFRACTION' ? 9 5 C 5 A 5 C 5 A 5 ? 'X-RAY DIFFRACTION' ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 3DR "O5'" O N N 1 3DR P P N N 2 3DR OP1 O N N 3 3DR OP2 O N N 4 3DR OP3 O N N 5 3DR "C2'" C N N 6 3DR "C5'" C N N 7 3DR "C4'" C N R 8 3DR "O4'" O N N 9 3DR "C1'" C N N 10 3DR "C3'" C N S 11 3DR "O3'" O N N 12 3DR HOP2 H N N 13 3DR HOP3 H N N 14 3DR "H2'" H N N 15 3DR "H2''" H N N 16 3DR "H5'" H N N 17 3DR "H5''" H N N 18 3DR "H4'1" H N N 19 3DR "H1'1" H N N 20 3DR "H1'2" H N N 21 3DR "H3'" H N N 22 3DR "HO3'" H N N 23 ADK N9 N Y N 24 ADK C4 C Y N 25 ADK N3 N Y N 26 ADK C2 C Y N 27 ADK N1 N Y N 28 ADK C6 C Y N 29 ADK N6 N N N 30 ADK C5 C Y N 31 ADK N7 N Y N 32 ADK C8 C Y N 33 ADK C3A C N N 34 ADK HC2 H N N 35 ADK HN61 H N N 36 ADK HN62 H N N 37 ADK H8 H N N 38 ADK H3A1 H N N 39 ADK H3A2 H N N 40 ADK H3A3 H N N 41 ALA N N N N 42 ALA CA C N S 43 ALA C C N N 44 ALA O O N N 45 ALA CB C N N 46 ALA OXT O N N 47 ALA H H N N 48 ALA H2 H N N 49 ALA HA H N N 50 ALA HB1 H N N 51 ALA HB2 H N N 52 ALA HB3 H N N 53 ALA HXT H N N 54 ARG N N N N 55 ARG CA C N S 56 ARG C C N N 57 ARG O O N N 58 ARG CB C N N 59 ARG CG C N N 60 ARG CD C N N 61 ARG NE N N N 62 ARG CZ C N N 63 ARG NH1 N N N 64 ARG NH2 N N N 65 ARG OXT O N N 66 ARG H H N N 67 ARG H2 H N N 68 ARG HA H N N 69 ARG HB2 H N N 70 ARG HB3 H N N 71 ARG HG2 H N N 72 ARG HG3 H N N 73 ARG HD2 H N N 74 ARG HD3 H N N 75 ARG HE H N N 76 ARG HH11 H N N 77 ARG HH12 H N N 78 ARG HH21 H N N 79 ARG HH22 H N N 80 ARG HXT H N N 81 ASN N N N N 82 ASN CA C N S 83 ASN C C N N 84 ASN O O N N 85 ASN CB C N N 86 ASN CG C N N 87 ASN OD1 O N N 88 ASN ND2 N N N 89 ASN OXT O N N 90 ASN H H N N 91 ASN H2 H N N 92 ASN HA H N N 93 ASN HB2 H N N 94 ASN HB3 H N N 95 ASN HD21 H N N 96 ASN HD22 H N N 97 ASN HXT H N N 98 ASP N N N N 99 ASP CA C N S 100 ASP C C N N 101 ASP O O N N 102 ASP CB C N N 103 ASP CG C N N 104 ASP OD1 O N N 105 ASP OD2 O N N 106 ASP OXT O N N 107 ASP H H N N 108 ASP H2 H N N 109 ASP HA H N N 110 ASP HB2 H N N 111 ASP HB3 H N N 112 ASP HD2 H N N 113 ASP HXT H N N 114 CYS N N N N 115 CYS CA C N R 116 CYS C C N N 117 CYS O O N N 118 CYS CB C N N 119 CYS SG S N N 120 CYS OXT O N N 121 CYS H H N N 122 CYS H2 H N N 123 CYS HA H N N 124 CYS HB2 H N N 125 CYS HB3 H N N 126 CYS HG H N N 127 CYS HXT H N N 128 DA OP3 O N N 129 DA P P N N 130 DA OP1 O N N 131 DA OP2 O N N 132 DA "O5'" O N N 133 DA "C5'" C N N 134 DA "C4'" C N R 135 DA "O4'" O N N 136 DA "C3'" C N S 137 DA "O3'" O N N 138 DA "C2'" C N N 139 DA "C1'" C N R 140 DA N9 N Y N 141 DA C8 C Y N 142 DA N7 N Y N 143 DA C5 C Y N 144 DA C6 C Y N 145 DA N6 N N N 146 DA N1 N Y N 147 DA C2 C Y N 148 DA N3 N Y N 149 DA C4 C Y N 150 DA HOP3 H N N 151 DA HOP2 H N N 152 DA "H5'" H N N 153 DA "H5''" H N N 154 DA "H4'" H N N 155 DA "H3'" H N N 156 DA "HO3'" H N N 157 DA "H2'" H N N 158 DA "H2''" H N N 159 DA "H1'" H N N 160 DA H8 H N N 161 DA H61 H N N 162 DA H62 H N N 163 DA H2 H N N 164 DC OP3 O N N 165 DC P P N N 166 DC OP1 O N N 167 DC OP2 O N N 168 DC "O5'" O N N 169 DC "C5'" C N N 170 DC "C4'" C N R 171 DC "O4'" O N N 172 DC "C3'" C N S 173 DC "O3'" O N N 174 DC "C2'" C N N 175 DC "C1'" C N R 176 DC N1 N N N 177 DC C2 C N N 178 DC O2 O N N 179 DC N3 N N N 180 DC C4 C N N 181 DC N4 N N N 182 DC C5 C N N 183 DC C6 C N N 184 DC HOP3 H N N 185 DC HOP2 H N N 186 DC "H5'" H N N 187 DC "H5''" H N N 188 DC "H4'" H N N 189 DC "H3'" H N N 190 DC "HO3'" H N N 191 DC "H2'" H N N 192 DC "H2''" H N N 193 DC "H1'" H N N 194 DC H41 H N N 195 DC H42 H N N 196 DC H5 H N N 197 DC H6 H N N 198 DG OP3 O N N 199 DG P P N N 200 DG OP1 O N N 201 DG OP2 O N N 202 DG "O5'" O N N 203 DG "C5'" C N N 204 DG "C4'" C N R 205 DG "O4'" O N N 206 DG "C3'" C N S 207 DG "O3'" O N N 208 DG "C2'" C N N 209 DG "C1'" C N R 210 DG N9 N Y N 211 DG C8 C Y N 212 DG N7 N Y N 213 DG C5 C Y N 214 DG C6 C N N 215 DG O6 O N N 216 DG N1 N N N 217 DG C2 C N N 218 DG N2 N N N 219 DG N3 N N N 220 DG C4 C Y N 221 DG HOP3 H N N 222 DG HOP2 H N N 223 DG "H5'" H N N 224 DG "H5''" H N N 225 DG "H4'" H N N 226 DG "H3'" H N N 227 DG "HO3'" H N N 228 DG "H2'" H N N 229 DG "H2''" H N N 230 DG "H1'" H N N 231 DG H8 H N N 232 DG H1 H N N 233 DG H21 H N N 234 DG H22 H N N 235 DT OP3 O N N 236 DT P P N N 237 DT OP1 O N N 238 DT OP2 O N N 239 DT "O5'" O N N 240 DT "C5'" C N N 241 DT "C4'" C N R 242 DT "O4'" O N N 243 DT "C3'" C N S 244 DT "O3'" O N N 245 DT "C2'" C N N 246 DT "C1'" C N R 247 DT N1 N N N 248 DT C2 C N N 249 DT O2 O N N 250 DT N3 N N N 251 DT C4 C N N 252 DT O4 O N N 253 DT C5 C N N 254 DT C7 C N N 255 DT C6 C N N 256 DT HOP3 H N N 257 DT HOP2 H N N 258 DT "H5'" H N N 259 DT "H5''" H N N 260 DT "H4'" H N N 261 DT "H3'" H N N 262 DT "HO3'" H N N 263 DT "H2'" H N N 264 DT "H2''" H N N 265 DT "H1'" H N N 266 DT H3 H N N 267 DT H71 H N N 268 DT H72 H N N 269 DT H73 H N N 270 DT H6 H N N 271 GLN N N N N 272 GLN CA C N S 273 GLN C C N N 274 GLN O O N N 275 GLN CB C N N 276 GLN CG C N N 277 GLN CD C N N 278 GLN OE1 O N N 279 GLN NE2 N N N 280 GLN OXT O N N 281 GLN H H N N 282 GLN H2 H N N 283 GLN HA H N N 284 GLN HB2 H N N 285 GLN HB3 H N N 286 GLN HG2 H N N 287 GLN HG3 H N N 288 GLN HE21 H N N 289 GLN HE22 H N N 290 GLN HXT H N N 291 GLU N N N N 292 GLU CA C N S 293 GLU C C N N 294 GLU O O N N 295 GLU CB C N N 296 GLU CG C N N 297 GLU CD C N N 298 GLU OE1 O N N 299 GLU OE2 O N N 300 GLU OXT O N N 301 GLU H H N N 302 GLU H2 H N N 303 GLU HA H N N 304 GLU HB2 H N N 305 GLU HB3 H N N 306 GLU HG2 H N N 307 GLU HG3 H N N 308 GLU HE2 H N N 309 GLU HXT H N N 310 GLY N N N N 311 GLY CA C N N 312 GLY C C N N 313 GLY O O N N 314 GLY OXT O N N 315 GLY H H N N 316 GLY H2 H N N 317 GLY HA2 H N N 318 GLY HA3 H N N 319 GLY HXT H N N 320 HIS N N N N 321 HIS CA C N S 322 HIS C C N N 323 HIS O O N N 324 HIS CB C N N 325 HIS CG C Y N 326 HIS ND1 N Y N 327 HIS CD2 C Y N 328 HIS CE1 C Y N 329 HIS NE2 N Y N 330 HIS OXT O N N 331 HIS H H N N 332 HIS H2 H N N 333 HIS HA H N N 334 HIS HB2 H N N 335 HIS HB3 H N N 336 HIS HD1 H N N 337 HIS HD2 H N N 338 HIS HE1 H N N 339 HIS HE2 H N N 340 HIS HXT H N N 341 HOH O O N N 342 HOH H1 H N N 343 HOH H2 H N N 344 ILE N N N N 345 ILE CA C N S 346 ILE C C N N 347 ILE O O N N 348 ILE CB C N S 349 ILE CG1 C N N 350 ILE CG2 C N N 351 ILE CD1 C N N 352 ILE OXT O N N 353 ILE H H N N 354 ILE H2 H N N 355 ILE HA H N N 356 ILE HB H N N 357 ILE HG12 H N N 358 ILE HG13 H N N 359 ILE HG21 H N N 360 ILE HG22 H N N 361 ILE HG23 H N N 362 ILE HD11 H N N 363 ILE HD12 H N N 364 ILE HD13 H N N 365 ILE HXT H N N 366 LEU N N N N 367 LEU CA C N S 368 LEU C C N N 369 LEU O O N N 370 LEU CB C N N 371 LEU CG C N N 372 LEU CD1 C N N 373 LEU CD2 C N N 374 LEU OXT O N N 375 LEU H H N N 376 LEU H2 H N N 377 LEU HA H N N 378 LEU HB2 H N N 379 LEU HB3 H N N 380 LEU HG H N N 381 LEU HD11 H N N 382 LEU HD12 H N N 383 LEU HD13 H N N 384 LEU HD21 H N N 385 LEU HD22 H N N 386 LEU HD23 H N N 387 LEU HXT H N N 388 LYS N N N N 389 LYS CA C N S 390 LYS C C N N 391 LYS O O N N 392 LYS CB C N N 393 LYS CG C N N 394 LYS CD C N N 395 LYS CE C N N 396 LYS NZ N N N 397 LYS OXT O N N 398 LYS H H N N 399 LYS H2 H N N 400 LYS HA H N N 401 LYS HB2 H N N 402 LYS HB3 H N N 403 LYS HG2 H N N 404 LYS HG3 H N N 405 LYS HD2 H N N 406 LYS HD3 H N N 407 LYS HE2 H N N 408 LYS HE3 H N N 409 LYS HZ1 H N N 410 LYS HZ2 H N N 411 LYS HZ3 H N N 412 LYS HXT H N N 413 MET N N N N 414 MET CA C N S 415 MET C C N N 416 MET O O N N 417 MET CB C N N 418 MET CG C N N 419 MET SD S N N 420 MET CE C N N 421 MET OXT O N N 422 MET H H N N 423 MET H2 H N N 424 MET HA H N N 425 MET HB2 H N N 426 MET HB3 H N N 427 MET HG2 H N N 428 MET HG3 H N N 429 MET HE1 H N N 430 MET HE2 H N N 431 MET HE3 H N N 432 MET HXT H N N 433 MSE N N N N 434 MSE CA C N S 435 MSE C C N N 436 MSE O O N N 437 MSE OXT O N N 438 MSE CB C N N 439 MSE CG C N N 440 MSE SE SE N N 441 MSE CE C N N 442 MSE H H N N 443 MSE H2 H N N 444 MSE HA H N N 445 MSE HXT H N N 446 MSE HB2 H N N 447 MSE HB3 H N N 448 MSE HG2 H N N 449 MSE HG3 H N N 450 MSE HE1 H N N 451 MSE HE2 H N N 452 MSE HE3 H N N 453 NA NA NA N N 454 PHE N N N N 455 PHE CA C N S 456 PHE C C N N 457 PHE O O N N 458 PHE CB C N N 459 PHE CG C Y N 460 PHE CD1 C Y N 461 PHE CD2 C Y N 462 PHE CE1 C Y N 463 PHE CE2 C Y N 464 PHE CZ C Y N 465 PHE OXT O N N 466 PHE H H N N 467 PHE H2 H N N 468 PHE HA H N N 469 PHE HB2 H N N 470 PHE HB3 H N N 471 PHE HD1 H N N 472 PHE HD2 H N N 473 PHE HE1 H N N 474 PHE HE2 H N N 475 PHE HZ H N N 476 PHE HXT H N N 477 PRO N N N N 478 PRO CA C N S 479 PRO C C N N 480 PRO O O N N 481 PRO CB C N N 482 PRO CG C N N 483 PRO CD C N N 484 PRO OXT O N N 485 PRO H H N N 486 PRO HA H N N 487 PRO HB2 H N N 488 PRO HB3 H N N 489 PRO HG2 H N N 490 PRO HG3 H N N 491 PRO HD2 H N N 492 PRO HD3 H N N 493 PRO HXT H N N 494 SER N N N N 495 SER CA C N S 496 SER C C N N 497 SER O O N N 498 SER CB C N N 499 SER OG O N N 500 SER OXT O N N 501 SER H H N N 502 SER H2 H N N 503 SER HA H N N 504 SER HB2 H N N 505 SER HB3 H N N 506 SER HG H N N 507 SER HXT H N N 508 THR N N N N 509 THR CA C N S 510 THR C C N N 511 THR O O N N 512 THR CB C N R 513 THR OG1 O N N 514 THR CG2 C N N 515 THR OXT O N N 516 THR H H N N 517 THR H2 H N N 518 THR HA H N N 519 THR HB H N N 520 THR HG1 H N N 521 THR HG21 H N N 522 THR HG22 H N N 523 THR HG23 H N N 524 THR HXT H N N 525 TRP N N N N 526 TRP CA C N S 527 TRP C C N N 528 TRP O O N N 529 TRP CB C N N 530 TRP CG C Y N 531 TRP CD1 C Y N 532 TRP CD2 C Y N 533 TRP NE1 N Y N 534 TRP CE2 C Y N 535 TRP CE3 C Y N 536 TRP CZ2 C Y N 537 TRP CZ3 C Y N 538 TRP CH2 C Y N 539 TRP OXT O N N 540 TRP H H N N 541 TRP H2 H N N 542 TRP HA H N N 543 TRP HB2 H N N 544 TRP HB3 H N N 545 TRP HD1 H N N 546 TRP HE1 H N N 547 TRP HE3 H N N 548 TRP HZ2 H N N 549 TRP HZ3 H N N 550 TRP HH2 H N N 551 TRP HXT H N N 552 TYR N N N N 553 TYR CA C N S 554 TYR C C N N 555 TYR O O N N 556 TYR CB C N N 557 TYR CG C Y N 558 TYR CD1 C Y N 559 TYR CD2 C Y N 560 TYR CE1 C Y N 561 TYR CE2 C Y N 562 TYR CZ C Y N 563 TYR OH O N N 564 TYR OXT O N N 565 TYR H H N N 566 TYR H2 H N N 567 TYR HA H N N 568 TYR HB2 H N N 569 TYR HB3 H N N 570 TYR HD1 H N N 571 TYR HD2 H N N 572 TYR HE1 H N N 573 TYR HE2 H N N 574 TYR HH H N N 575 TYR HXT H N N 576 VAL N N N N 577 VAL CA C N S 578 VAL C C N N 579 VAL O O N N 580 VAL CB C N N 581 VAL CG1 C N N 582 VAL CG2 C N N 583 VAL OXT O N N 584 VAL H H N N 585 VAL H2 H N N 586 VAL HA H N N 587 VAL HB H N N 588 VAL HG11 H N N 589 VAL HG12 H N N 590 VAL HG13 H N N 591 VAL HG21 H N N 592 VAL HG22 H N N 593 VAL HG23 H N N 594 VAL HXT H N N 595 ZN ZN ZN N N 596 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3DR "O5'" P sing N N 1 3DR "O5'" "C5'" sing N N 2 3DR P OP1 doub N N 3 3DR P OP2 sing N N 4 3DR P OP3 sing N N 5 3DR OP2 HOP2 sing N N 6 3DR OP3 HOP3 sing N N 7 3DR "C2'" "C1'" sing N N 8 3DR "C2'" "C3'" sing N N 9 3DR "C2'" "H2'" sing N N 10 3DR "C2'" "H2''" sing N N 11 3DR "C5'" "C4'" sing N N 12 3DR "C5'" "H5'" sing N N 13 3DR "C5'" "H5''" sing N N 14 3DR "C4'" "O4'" sing N N 15 3DR "C4'" "C3'" sing N N 16 3DR "C4'" "H4'1" sing N N 17 3DR "O4'" "C1'" sing N N 18 3DR "C1'" "H1'1" sing N N 19 3DR "C1'" "H1'2" sing N N 20 3DR "C3'" "O3'" sing N N 21 3DR "C3'" "H3'" sing N N 22 3DR "O3'" "HO3'" sing N N 23 ADK N9 C4 doub Y N 24 ADK N9 C8 sing Y N 25 ADK C4 N3 sing Y N 26 ADK C4 C5 sing Y N 27 ADK N3 C2 sing Y N 28 ADK N3 C3A sing N N 29 ADK C2 N1 doub Y N 30 ADK C2 HC2 sing N N 31 ADK N1 C6 sing Y N 32 ADK C6 N6 sing N N 33 ADK C6 C5 doub Y N 34 ADK N6 HN61 sing N N 35 ADK N6 HN62 sing N N 36 ADK C5 N7 sing Y N 37 ADK N7 C8 doub Y N 38 ADK C8 H8 sing N N 39 ADK C3A H3A1 sing N N 40 ADK C3A H3A2 sing N N 41 ADK C3A H3A3 sing N N 42 ALA N CA sing N N 43 ALA N H sing N N 44 ALA N H2 sing N N 45 ALA CA C sing N N 46 ALA CA CB sing N N 47 ALA CA HA sing N N 48 ALA C O doub N N 49 ALA C OXT sing N N 50 ALA CB HB1 sing N N 51 ALA CB HB2 sing N N 52 ALA CB HB3 sing N N 53 ALA OXT HXT sing N N 54 ARG N CA sing N N 55 ARG N H sing N N 56 ARG N H2 sing N N 57 ARG CA C sing N N 58 ARG CA CB sing N N 59 ARG CA HA sing N N 60 ARG C O doub N N 61 ARG C OXT sing N N 62 ARG CB CG sing N N 63 ARG CB HB2 sing N N 64 ARG CB HB3 sing N N 65 ARG CG CD sing N N 66 ARG CG HG2 sing N N 67 ARG CG HG3 sing N N 68 ARG CD NE sing N N 69 ARG CD HD2 sing N N 70 ARG CD HD3 sing N N 71 ARG NE CZ sing N N 72 ARG NE HE sing N N 73 ARG CZ NH1 sing N N 74 ARG CZ NH2 doub N N 75 ARG NH1 HH11 sing N N 76 ARG NH1 HH12 sing N N 77 ARG NH2 HH21 sing N N 78 ARG NH2 HH22 sing N N 79 ARG OXT HXT sing N N 80 ASN N CA sing N N 81 ASN N H sing N N 82 ASN N H2 sing N N 83 ASN CA C sing N N 84 ASN CA CB sing N N 85 ASN CA HA sing N N 86 ASN C O doub N N 87 ASN C OXT sing N N 88 ASN CB CG sing N N 89 ASN CB HB2 sing N N 90 ASN CB HB3 sing N N 91 ASN CG OD1 doub N N 92 ASN CG ND2 sing N N 93 ASN ND2 HD21 sing N N 94 ASN ND2 HD22 sing N N 95 ASN OXT HXT sing N N 96 ASP N CA sing N N 97 ASP N H sing N N 98 ASP N H2 sing N N 99 ASP CA C sing N N 100 ASP CA CB sing N N 101 ASP CA HA sing N N 102 ASP C O doub N N 103 ASP C OXT sing N N 104 ASP CB CG sing N N 105 ASP CB HB2 sing N N 106 ASP CB HB3 sing N N 107 ASP CG OD1 doub N N 108 ASP CG OD2 sing N N 109 ASP OD2 HD2 sing N N 110 ASP OXT HXT sing N N 111 CYS N CA sing N N 112 CYS N H sing N N 113 CYS N H2 sing N N 114 CYS CA C sing N N 115 CYS CA CB sing N N 116 CYS CA HA sing N N 117 CYS C O doub N N 118 CYS C OXT sing N N 119 CYS CB SG sing N N 120 CYS CB HB2 sing N N 121 CYS CB HB3 sing N N 122 CYS SG HG sing N N 123 CYS OXT HXT sing N N 124 DA OP3 P sing N N 125 DA OP3 HOP3 sing N N 126 DA P OP1 doub N N 127 DA P OP2 sing N N 128 DA P "O5'" sing N N 129 DA OP2 HOP2 sing N N 130 DA "O5'" "C5'" sing N N 131 DA "C5'" "C4'" sing N N 132 DA "C5'" "H5'" sing N N 133 DA "C5'" "H5''" sing N N 134 DA "C4'" "O4'" sing N N 135 DA "C4'" "C3'" sing N N 136 DA "C4'" "H4'" sing N N 137 DA "O4'" "C1'" sing N N 138 DA "C3'" "O3'" sing N N 139 DA "C3'" "C2'" sing N N 140 DA "C3'" "H3'" sing N N 141 DA "O3'" "HO3'" sing N N 142 DA "C2'" "C1'" sing N N 143 DA "C2'" "H2'" sing N N 144 DA "C2'" "H2''" sing N N 145 DA "C1'" N9 sing N N 146 DA "C1'" "H1'" sing N N 147 DA N9 C8 sing Y N 148 DA N9 C4 sing Y N 149 DA C8 N7 doub Y N 150 DA C8 H8 sing N N 151 DA N7 C5 sing Y N 152 DA C5 C6 sing Y N 153 DA C5 C4 doub Y N 154 DA C6 N6 sing N N 155 DA C6 N1 doub Y N 156 DA N6 H61 sing N N 157 DA N6 H62 sing N N 158 DA N1 C2 sing Y N 159 DA C2 N3 doub Y N 160 DA C2 H2 sing N N 161 DA N3 C4 sing Y N 162 DC OP3 P sing N N 163 DC OP3 HOP3 sing N N 164 DC P OP1 doub N N 165 DC P OP2 sing N N 166 DC P "O5'" sing N N 167 DC OP2 HOP2 sing N N 168 DC "O5'" "C5'" sing N N 169 DC "C5'" "C4'" sing N N 170 DC "C5'" "H5'" sing N N 171 DC "C5'" "H5''" sing N N 172 DC "C4'" "O4'" sing N N 173 DC "C4'" "C3'" sing N N 174 DC "C4'" "H4'" sing N N 175 DC "O4'" "C1'" sing N N 176 DC "C3'" "O3'" sing N N 177 DC "C3'" "C2'" sing N N 178 DC "C3'" "H3'" sing N N 179 DC "O3'" "HO3'" sing N N 180 DC "C2'" "C1'" sing N N 181 DC "C2'" "H2'" sing N N 182 DC "C2'" "H2''" sing N N 183 DC "C1'" N1 sing N N 184 DC "C1'" "H1'" sing N N 185 DC N1 C2 sing N N 186 DC N1 C6 sing N N 187 DC C2 O2 doub N N 188 DC C2 N3 sing N N 189 DC N3 C4 doub N N 190 DC C4 N4 sing N N 191 DC C4 C5 sing N N 192 DC N4 H41 sing N N 193 DC N4 H42 sing N N 194 DC C5 C6 doub N N 195 DC C5 H5 sing N N 196 DC C6 H6 sing N N 197 DG OP3 P sing N N 198 DG OP3 HOP3 sing N N 199 DG P OP1 doub N N 200 DG P OP2 sing N N 201 DG P "O5'" sing N N 202 DG OP2 HOP2 sing N N 203 DG "O5'" "C5'" sing N N 204 DG "C5'" "C4'" sing N N 205 DG "C5'" "H5'" sing N N 206 DG "C5'" "H5''" sing N N 207 DG "C4'" "O4'" sing N N 208 DG "C4'" "C3'" sing N N 209 DG "C4'" "H4'" sing N N 210 DG "O4'" "C1'" sing N N 211 DG "C3'" "O3'" sing N N 212 DG "C3'" "C2'" sing N N 213 DG "C3'" "H3'" sing N N 214 DG "O3'" "HO3'" sing N N 215 DG "C2'" "C1'" sing N N 216 DG "C2'" "H2'" sing N N 217 DG "C2'" "H2''" sing N N 218 DG "C1'" N9 sing N N 219 DG "C1'" "H1'" sing N N 220 DG N9 C8 sing Y N 221 DG N9 C4 sing Y N 222 DG C8 N7 doub Y N 223 DG C8 H8 sing N N 224 DG N7 C5 sing Y N 225 DG C5 C6 sing N N 226 DG C5 C4 doub Y N 227 DG C6 O6 doub N N 228 DG C6 N1 sing N N 229 DG N1 C2 sing N N 230 DG N1 H1 sing N N 231 DG C2 N2 sing N N 232 DG C2 N3 doub N N 233 DG N2 H21 sing N N 234 DG N2 H22 sing N N 235 DG N3 C4 sing N N 236 DT OP3 P sing N N 237 DT OP3 HOP3 sing N N 238 DT P OP1 doub N N 239 DT P OP2 sing N N 240 DT P "O5'" sing N N 241 DT OP2 HOP2 sing N N 242 DT "O5'" "C5'" sing N N 243 DT "C5'" "C4'" sing N N 244 DT "C5'" "H5'" sing N N 245 DT "C5'" "H5''" sing N N 246 DT "C4'" "O4'" sing N N 247 DT "C4'" "C3'" sing N N 248 DT "C4'" "H4'" sing N N 249 DT "O4'" "C1'" sing N N 250 DT "C3'" "O3'" sing N N 251 DT "C3'" "C2'" sing N N 252 DT "C3'" "H3'" sing N N 253 DT "O3'" "HO3'" sing N N 254 DT "C2'" "C1'" sing N N 255 DT "C2'" "H2'" sing N N 256 DT "C2'" "H2''" sing N N 257 DT "C1'" N1 sing N N 258 DT "C1'" "H1'" sing N N 259 DT N1 C2 sing N N 260 DT N1 C6 sing N N 261 DT C2 O2 doub N N 262 DT C2 N3 sing N N 263 DT N3 C4 sing N N 264 DT N3 H3 sing N N 265 DT C4 O4 doub N N 266 DT C4 C5 sing N N 267 DT C5 C7 sing N N 268 DT C5 C6 doub N N 269 DT C7 H71 sing N N 270 DT C7 H72 sing N N 271 DT C7 H73 sing N N 272 DT C6 H6 sing N N 273 GLN N CA sing N N 274 GLN N H sing N N 275 GLN N H2 sing N N 276 GLN CA C sing N N 277 GLN CA CB sing N N 278 GLN CA HA sing N N 279 GLN C O doub N N 280 GLN C OXT sing N N 281 GLN CB CG sing N N 282 GLN CB HB2 sing N N 283 GLN CB HB3 sing N N 284 GLN CG CD sing N N 285 GLN CG HG2 sing N N 286 GLN CG HG3 sing N N 287 GLN CD OE1 doub N N 288 GLN CD NE2 sing N N 289 GLN NE2 HE21 sing N N 290 GLN NE2 HE22 sing N N 291 GLN OXT HXT sing N N 292 GLU N CA sing N N 293 GLU N H sing N N 294 GLU N H2 sing N N 295 GLU CA C sing N N 296 GLU CA CB sing N N 297 GLU CA HA sing N N 298 GLU C O doub N N 299 GLU C OXT sing N N 300 GLU CB CG sing N N 301 GLU CB HB2 sing N N 302 GLU CB HB3 sing N N 303 GLU CG CD sing N N 304 GLU CG HG2 sing N N 305 GLU CG HG3 sing N N 306 GLU CD OE1 doub N N 307 GLU CD OE2 sing N N 308 GLU OE2 HE2 sing N N 309 GLU OXT HXT sing N N 310 GLY N CA sing N N 311 GLY N H sing N N 312 GLY N H2 sing N N 313 GLY CA C sing N N 314 GLY CA HA2 sing N N 315 GLY CA HA3 sing N N 316 GLY C O doub N N 317 GLY C OXT sing N N 318 GLY OXT HXT sing N N 319 HIS N CA sing N N 320 HIS N H sing N N 321 HIS N H2 sing N N 322 HIS CA C sing N N 323 HIS CA CB sing N N 324 HIS CA HA sing N N 325 HIS C O doub N N 326 HIS C OXT sing N N 327 HIS CB CG sing N N 328 HIS CB HB2 sing N N 329 HIS CB HB3 sing N N 330 HIS CG ND1 sing Y N 331 HIS CG CD2 doub Y N 332 HIS ND1 CE1 doub Y N 333 HIS ND1 HD1 sing N N 334 HIS CD2 NE2 sing Y N 335 HIS CD2 HD2 sing N N 336 HIS CE1 NE2 sing Y N 337 HIS CE1 HE1 sing N N 338 HIS NE2 HE2 sing N N 339 HIS OXT HXT sing N N 340 HOH O H1 sing N N 341 HOH O H2 sing N N 342 ILE N CA sing N N 343 ILE N H sing N N 344 ILE N H2 sing N N 345 ILE CA C sing N N 346 ILE CA CB sing N N 347 ILE CA HA sing N N 348 ILE C O doub N N 349 ILE C OXT sing N N 350 ILE CB CG1 sing N N 351 ILE CB CG2 sing N N 352 ILE CB HB sing N N 353 ILE CG1 CD1 sing N N 354 ILE CG1 HG12 sing N N 355 ILE CG1 HG13 sing N N 356 ILE CG2 HG21 sing N N 357 ILE CG2 HG22 sing N N 358 ILE CG2 HG23 sing N N 359 ILE CD1 HD11 sing N N 360 ILE CD1 HD12 sing N N 361 ILE CD1 HD13 sing N N 362 ILE OXT HXT sing N N 363 LEU N CA sing N N 364 LEU N H sing N N 365 LEU N H2 sing N N 366 LEU CA C sing N N 367 LEU CA CB sing N N 368 LEU CA HA sing N N 369 LEU C O doub N N 370 LEU C OXT sing N N 371 LEU CB CG sing N N 372 LEU CB HB2 sing N N 373 LEU CB HB3 sing N N 374 LEU CG CD1 sing N N 375 LEU CG CD2 sing N N 376 LEU CG HG sing N N 377 LEU CD1 HD11 sing N N 378 LEU CD1 HD12 sing N N 379 LEU CD1 HD13 sing N N 380 LEU CD2 HD21 sing N N 381 LEU CD2 HD22 sing N N 382 LEU CD2 HD23 sing N N 383 LEU OXT HXT sing N N 384 LYS N CA sing N N 385 LYS N H sing N N 386 LYS N H2 sing N N 387 LYS CA C sing N N 388 LYS CA CB sing N N 389 LYS CA HA sing N N 390 LYS C O doub N N 391 LYS C OXT sing N N 392 LYS CB CG sing N N 393 LYS CB HB2 sing N N 394 LYS CB HB3 sing N N 395 LYS CG CD sing N N 396 LYS CG HG2 sing N N 397 LYS CG HG3 sing N N 398 LYS CD CE sing N N 399 LYS CD HD2 sing N N 400 LYS CD HD3 sing N N 401 LYS CE NZ sing N N 402 LYS CE HE2 sing N N 403 LYS CE HE3 sing N N 404 LYS NZ HZ1 sing N N 405 LYS NZ HZ2 sing N N 406 LYS NZ HZ3 sing N N 407 LYS OXT HXT sing N N 408 MET N CA sing N N 409 MET N H sing N N 410 MET N H2 sing N N 411 MET CA C sing N N 412 MET CA CB sing N N 413 MET CA HA sing N N 414 MET C O doub N N 415 MET C OXT sing N N 416 MET CB CG sing N N 417 MET CB HB2 sing N N 418 MET CB HB3 sing N N 419 MET CG SD sing N N 420 MET CG HG2 sing N N 421 MET CG HG3 sing N N 422 MET SD CE sing N N 423 MET CE HE1 sing N N 424 MET CE HE2 sing N N 425 MET CE HE3 sing N N 426 MET OXT HXT sing N N 427 MSE N CA sing N N 428 MSE N H sing N N 429 MSE N H2 sing N N 430 MSE CA C sing N N 431 MSE CA CB sing N N 432 MSE CA HA sing N N 433 MSE C O doub N N 434 MSE C OXT sing N N 435 MSE OXT HXT sing N N 436 MSE CB CG sing N N 437 MSE CB HB2 sing N N 438 MSE CB HB3 sing N N 439 MSE CG SE sing N N 440 MSE CG HG2 sing N N 441 MSE CG HG3 sing N N 442 MSE SE CE sing N N 443 MSE CE HE1 sing N N 444 MSE CE HE2 sing N N 445 MSE CE HE3 sing N N 446 PHE N CA sing N N 447 PHE N H sing N N 448 PHE N H2 sing N N 449 PHE CA C sing N N 450 PHE CA CB sing N N 451 PHE CA HA sing N N 452 PHE C O doub N N 453 PHE C OXT sing N N 454 PHE CB CG sing N N 455 PHE CB HB2 sing N N 456 PHE CB HB3 sing N N 457 PHE CG CD1 doub Y N 458 PHE CG CD2 sing Y N 459 PHE CD1 CE1 sing Y N 460 PHE CD1 HD1 sing N N 461 PHE CD2 CE2 doub Y N 462 PHE CD2 HD2 sing N N 463 PHE CE1 CZ doub Y N 464 PHE CE1 HE1 sing N N 465 PHE CE2 CZ sing Y N 466 PHE CE2 HE2 sing N N 467 PHE CZ HZ sing N N 468 PHE OXT HXT sing N N 469 PRO N CA sing N N 470 PRO N CD sing N N 471 PRO N H sing N N 472 PRO CA C sing N N 473 PRO CA CB sing N N 474 PRO CA HA sing N N 475 PRO C O doub N N 476 PRO C OXT sing N N 477 PRO CB CG sing N N 478 PRO CB HB2 sing N N 479 PRO CB HB3 sing N N 480 PRO CG CD sing N N 481 PRO CG HG2 sing N N 482 PRO CG HG3 sing N N 483 PRO CD HD2 sing N N 484 PRO CD HD3 sing N N 485 PRO OXT HXT sing N N 486 SER N CA sing N N 487 SER N H sing N N 488 SER N H2 sing N N 489 SER CA C sing N N 490 SER CA CB sing N N 491 SER CA HA sing N N 492 SER C O doub N N 493 SER C OXT sing N N 494 SER CB OG sing N N 495 SER CB HB2 sing N N 496 SER CB HB3 sing N N 497 SER OG HG sing N N 498 SER OXT HXT sing N N 499 THR N CA sing N N 500 THR N H sing N N 501 THR N H2 sing N N 502 THR CA C sing N N 503 THR CA CB sing N N 504 THR CA HA sing N N 505 THR C O doub N N 506 THR C OXT sing N N 507 THR CB OG1 sing N N 508 THR CB CG2 sing N N 509 THR CB HB sing N N 510 THR OG1 HG1 sing N N 511 THR CG2 HG21 sing N N 512 THR CG2 HG22 sing N N 513 THR CG2 HG23 sing N N 514 THR OXT HXT sing N N 515 TRP N CA sing N N 516 TRP N H sing N N 517 TRP N H2 sing N N 518 TRP CA C sing N N 519 TRP CA CB sing N N 520 TRP CA HA sing N N 521 TRP C O doub N N 522 TRP C OXT sing N N 523 TRP CB CG sing N N 524 TRP CB HB2 sing N N 525 TRP CB HB3 sing N N 526 TRP CG CD1 doub Y N 527 TRP CG CD2 sing Y N 528 TRP CD1 NE1 sing Y N 529 TRP CD1 HD1 sing N N 530 TRP CD2 CE2 doub Y N 531 TRP CD2 CE3 sing Y N 532 TRP NE1 CE2 sing Y N 533 TRP NE1 HE1 sing N N 534 TRP CE2 CZ2 sing Y N 535 TRP CE3 CZ3 doub Y N 536 TRP CE3 HE3 sing N N 537 TRP CZ2 CH2 doub Y N 538 TRP CZ2 HZ2 sing N N 539 TRP CZ3 CH2 sing Y N 540 TRP CZ3 HZ3 sing N N 541 TRP CH2 HH2 sing N N 542 TRP OXT HXT sing N N 543 TYR N CA sing N N 544 TYR N H sing N N 545 TYR N H2 sing N N 546 TYR CA C sing N N 547 TYR CA CB sing N N 548 TYR CA HA sing N N 549 TYR C O doub N N 550 TYR C OXT sing N N 551 TYR CB CG sing N N 552 TYR CB HB2 sing N N 553 TYR CB HB3 sing N N 554 TYR CG CD1 doub Y N 555 TYR CG CD2 sing Y N 556 TYR CD1 CE1 sing Y N 557 TYR CD1 HD1 sing N N 558 TYR CD2 CE2 doub Y N 559 TYR CD2 HD2 sing N N 560 TYR CE1 CZ doub Y N 561 TYR CE1 HE1 sing N N 562 TYR CE2 CZ sing Y N 563 TYR CE2 HE2 sing N N 564 TYR CZ OH sing N N 565 TYR OH HH sing N N 566 TYR OXT HXT sing N N 567 VAL N CA sing N N 568 VAL N H sing N N 569 VAL N H2 sing N N 570 VAL CA C sing N N 571 VAL CA CB sing N N 572 VAL CA HA sing N N 573 VAL C O doub N N 574 VAL C OXT sing N N 575 VAL CB CG1 sing N N 576 VAL CB CG2 sing N N 577 VAL CB HB sing N N 578 VAL CG1 HG11 sing N N 579 VAL CG1 HG12 sing N N 580 VAL CG1 HG13 sing N N 581 VAL CG2 HG21 sing N N 582 VAL CG2 HG22 sing N N 583 VAL CG2 HG23 sing N N 584 VAL OXT HXT sing N N 585 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2OFI 'double helix' 2OFI 'b-form double helix' 2OFI 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 11 1_555 0.113 -0.197 0.232 6.470 -17.517 2.147 1 C_DC1:DG11_B C 1 ? B 11 ? 19 1 1 A DC 2 1_555 B DG 10 1_555 0.236 -0.273 0.024 -1.382 -12.152 1.868 2 C_DC2:DG10_B C 2 ? B 10 ? 19 1 1 A DG 3 1_555 B DC 9 1_555 -0.209 -0.128 0.170 -14.674 -17.133 -0.722 3 C_DG3:DC9_B C 3 ? B 9 ? 19 1 1 A DT 4 1_555 B DA 8 1_555 -0.110 -0.143 0.059 -7.248 4.923 -1.926 4 C_DT4:DA8_B C 4 ? B 8 ? 20 1 1 A DA 6 1_555 B DT 6 1_555 -0.896 -0.035 -0.356 -14.184 -12.765 9.122 5 C_DA6:DT6_B C 6 ? B 6 ? 20 1 1 A DG 7 1_555 B DC 5 1_555 -0.232 -0.206 0.237 -0.573 -5.650 3.725 6 C_DG7:DC5_B C 7 ? B 5 ? 19 1 1 A DT 8 1_555 B DA 4 1_555 -0.131 -0.238 0.134 0.399 -9.165 0.747 7 C_DT8:DA4_B C 8 ? B 4 ? 20 1 1 A DC 9 1_555 B DG 3 1_555 0.530 -0.250 -0.061 -3.470 -10.421 3.451 8 C_DC9:DG3_B C 9 ? B 3 ? 19 1 1 A DC 10 1_555 B DG 2 1_555 0.298 -0.206 -0.030 -4.612 -6.533 -4.352 9 C_DC10:DG2_B C 10 ? B 2 ? 19 1 1 A DG 11 1_555 B DC 1 1_555 -0.028 -0.142 0.300 5.917 -10.715 1.784 10 C_DG11:DC1_B C 11 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 11 1_555 A DC 2 1_555 B DG 10 1_555 -0.470 -1.088 3.388 1.495 6.246 33.682 -2.832 1.033 3.119 10.659 -2.552 34.272 1 CC_DC1DC2:DG10DG11_BB C 1 ? B 11 ? C 2 ? B 10 ? 1 A DC 2 1_555 B DG 10 1_555 A DG 3 1_555 B DC 9 1_555 0.160 -0.822 3.389 -0.489 15.422 37.983 -2.857 -0.282 2.857 22.590 0.717 40.890 2 CC_DC2DG3:DC9DG10_BB C 2 ? B 10 ? C 3 ? B 9 ? 1 A DG 3 1_555 B DC 9 1_555 A DT 4 1_555 B DA 8 1_555 -0.147 -0.745 3.151 4.155 -0.519 32.232 -1.243 0.963 3.119 -0.931 -7.445 32.496 3 CC_DG3DT4:DA8DC9_BB C 3 ? B 9 ? C 4 ? B 8 ? 1 A DA 6 1_555 B DT 6 1_555 A DG 7 1_555 B DC 5 1_555 -0.422 0.166 2.929 -6.476 1.651 27.993 -0.004 -0.474 2.954 3.352 13.152 28.765 4 CC_DA6DG7:DC5DT6_BB C 6 ? B 6 ? C 7 ? B 5 ? 1 A DG 7 1_555 B DC 5 1_555 A DT 8 1_555 B DA 4 1_555 -0.606 -0.463 3.204 1.442 2.615 31.444 -1.320 1.373 3.126 4.811 -2.652 31.582 5 CC_DG7DT8:DA4DC5_BB C 7 ? B 5 ? C 8 ? B 4 ? 1 A DT 8 1_555 B DA 4 1_555 A DC 9 1_555 B DG 3 1_555 0.607 0.027 3.304 3.630 2.159 39.939 -0.211 -0.463 3.341 3.150 -5.297 40.152 6 CC_DT8DC9:DG3DA4_BB C 8 ? B 4 ? C 9 ? B 3 ? 1 A DC 9 1_555 B DG 3 1_555 A DC 10 1_555 B DG 2 1_555 -0.062 -0.228 3.324 1.124 4.702 33.153 -1.178 0.295 3.258 8.186 -1.957 33.494 7 CC_DC9DC10:DG2DG3_BB C 9 ? B 3 ? C 10 ? B 2 ? 1 A DC 10 1_555 B DG 2 1_555 A DG 11 1_555 B DC 1 1_555 0.109 0.280 3.048 -4.920 7.715 34.986 -0.572 -0.829 2.999 12.569 8.015 36.127 8 CC_DC10DG11:DC1DG2_BB C 10 ? B 2 ? C 11 ? B 1 ? # _atom_sites.entry_id 2OFI _atom_sites.fract_transf_matrix[1][1] 0.009807 _atom_sites.fract_transf_matrix[1][2] 0.005662 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011325 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018031 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P S SE ZN # loop_