HEADER OXIDOREDUCTASE 05-JAN-07 2OG5 TITLE CRYSTAL STRUCTURE OF ASPARAGINE OXYGENASE (ASNO) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE OXYGENASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES COELICOLOR; SOURCE 3 ORGANISM_TAXID: 1902; SOURCE 4 STRAIN: DSMZ 40783; SOURCE 5 GENE: SCO3236 (ASNO); SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQTEVMS01 KEYWDS NON-RIBOSOMAL PEPTIDE SYNTHESIS, IRON(II)/ALPHA-KETOGLUTARATE KEYWDS 2 DEPENDENT HYDROXYLASE, JELLY-ROLL FOLD, BETA-HYDROXYLATION OF AMINO KEYWDS 3 ACIDS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR L.O.ESSEN,M.STRIEKER REVDAT 6 30-AUG-23 2OG5 1 REMARK SEQADV LINK REVDAT 5 18-OCT-17 2OG5 1 REMARK REVDAT 4 13-JUL-11 2OG5 1 VERSN REVDAT 3 24-FEB-09 2OG5 1 VERSN REVDAT 2 10-APR-07 2OG5 1 JRNL REVDAT 1 06-MAR-07 2OG5 0 JRNL AUTH M.STRIEKER,F.KOPP,C.MAHLERT,L.O.ESSEN,M.A.MARAHIEL JRNL TITL MECHANISTIC AND STRUCTURAL BASIS OF STEREOSPECIFIC JRNL TITL 2 CBETA-HYDROXYLATION IN CALCIUM-DEPENDENT ANTIBIOTIC, A JRNL TITL 3 DAPTOMYCIN-TYPE LIPOPEPTIDE. JRNL REF ACS CHEM.BIOL. V. 2 187 2007 JRNL REFN ISSN 1554-8929 JRNL PMID 17373765 JRNL DOI 10.1021/CB700012Y REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 77685 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2342 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5240 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2940 REMARK 3 BIN FREE R VALUE SET COUNT : 143 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2418 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 342 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 21.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.21000 REMARK 3 B22 (A**2) : 0.21000 REMARK 3 B33 (A**2) : -0.31000 REMARK 3 B12 (A**2) : 0.10000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.052 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.053 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.039 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.034 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2511 ; 0.007 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1723 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3435 ; 1.175 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4152 ; 0.900 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 321 ; 5.415 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 118 ;30.837 ;22.203 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 375 ;10.898 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;18.792 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 384 ; 0.065 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2864 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 534 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 490 ; 0.211 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1890 ; 0.206 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1231 ; 0.168 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1340 ; 0.083 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 263 ; 0.148 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.034 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 9 ; 0.136 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 59 ; 0.346 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 33 ; 0.213 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2051 ; 0.856 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 632 ; 0.128 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2568 ; 0.954 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1037 ; 1.742 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 865 ; 2.675 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 10 A 330 REMARK 3 ORIGIN FOR THE GROUP (A): -5.6545 62.8718 -12.5057 REMARK 3 T TENSOR REMARK 3 T11: -0.0342 T22: -0.0209 REMARK 3 T33: -0.0391 T12: -0.0158 REMARK 3 T13: 0.0024 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.1214 L22: 1.3588 REMARK 3 L33: 0.2672 L12: -0.0471 REMARK 3 L13: -0.0562 L23: -0.1863 REMARK 3 S TENSOR REMARK 3 S11: 0.0118 S12: -0.0321 S13: -0.0205 REMARK 3 S21: 0.0073 S22: -0.0702 S23: -0.0214 REMARK 3 S31: 0.0398 S32: -0.0219 S33: 0.0584 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2OG5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1000041093. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X13 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8080 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78000 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 23.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.900 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.850 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.99 REMARK 200 R MERGE FOR SHELL (I) : 0.99200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1DRY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.5 M SODIUM ACETATE, 0.1 M HEPES, PH REMARK 280 4.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.29267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 60.58533 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 60.58533 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 30.29267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 620 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 LYS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 ASP A -13 REMARK 465 TYR A -12 REMARK 465 ASP A -11 REMARK 465 ILE A -10 REMARK 465 PRO A -9 REMARK 465 THR A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 ASN A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 GLY A 7 REMARK 465 PRO A 8 REMARK 465 ALA A 9 REMARK 465 LEU A 218 REMARK 465 SER A 219 REMARK 465 GLY A 220 REMARK 465 PRO A 221 REMARK 465 GLU A 222 REMARK 465 GLU A 223 REMARK 465 GLN A 331 REMARK 465 PRO A 332 REMARK 465 ALA A 333 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 MET A 86 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 542 O HOH A 687 1.99 REMARK 500 O HOH A 707 O HOH A 725 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 646 O HOH A 700 2665 2.15 REMARK 500 O HOH A 461 O HOH A 461 5674 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MET A 86 CB MET A 86 CG -0.463 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 86 CA - CB - CG ANGL. DEV. = 39.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 155 NE2 REMARK 620 2 GLU A 157 OE1 104.3 REMARK 620 3 HIS A 287 NE2 96.5 107.0 REMARK 620 4 HOH A 643 O 86.9 81.2 169.8 REMARK 620 5 HOH A 710 O 167.0 88.5 81.4 93.1 REMARK 620 6 HOH A 712 O 100.9 147.7 89.8 80.2 66.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 402 DBREF 2OG5 A 2 333 UNP Q9Z4Z5 Q9Z4Z5_STRCO 2 333 SEQADV 2OG5 MET A -23 UNP Q9Z4Z5 CLONING ARTIFACT SEQADV 2OG5 LYS A -22 UNP Q9Z4Z5 CLONING ARTIFACT SEQADV 2OG5 HIS A -21 UNP Q9Z4Z5 EXPRESSION TAG SEQADV 2OG5 HIS A -20 UNP Q9Z4Z5 EXPRESSION TAG SEQADV 2OG5 HIS A -19 UNP Q9Z4Z5 EXPRESSION TAG SEQADV 2OG5 HIS A -18 UNP Q9Z4Z5 EXPRESSION TAG SEQADV 2OG5 HIS A -17 UNP Q9Z4Z5 EXPRESSION TAG SEQADV 2OG5 HIS A -16 UNP Q9Z4Z5 EXPRESSION TAG SEQADV 2OG5 HIS A -15 UNP Q9Z4Z5 EXPRESSION TAG SEQADV 2OG5 SER A -14 UNP Q9Z4Z5 CLONING ARTIFACT SEQADV 2OG5 ASP A -13 UNP Q9Z4Z5 CLONING ARTIFACT SEQADV 2OG5 TYR A -12 UNP Q9Z4Z5 CLONING ARTIFACT SEQADV 2OG5 ASP A -11 UNP Q9Z4Z5 CLONING ARTIFACT SEQADV 2OG5 ILE A -10 UNP Q9Z4Z5 CLONING ARTIFACT SEQADV 2OG5 PRO A -9 UNP Q9Z4Z5 CLONING ARTIFACT SEQADV 2OG5 THR A -8 UNP Q9Z4Z5 CLONING ARTIFACT SEQADV 2OG5 THR A -7 UNP Q9Z4Z5 CLONING ARTIFACT SEQADV 2OG5 GLU A -6 UNP Q9Z4Z5 CLONING ARTIFACT SEQADV 2OG5 ASN A -5 UNP Q9Z4Z5 CLONING ARTIFACT SEQADV 2OG5 LEU A -4 UNP Q9Z4Z5 CLONING ARTIFACT SEQADV 2OG5 TYR A -3 UNP Q9Z4Z5 CLONING ARTIFACT SEQADV 2OG5 PHE A -2 UNP Q9Z4Z5 CLONING ARTIFACT SEQADV 2OG5 GLN A -1 UNP Q9Z4Z5 CLONING ARTIFACT SEQADV 2OG5 GLY A 0 UNP Q9Z4Z5 CLONING ARTIFACT SEQADV 2OG5 SER A 1 UNP Q9Z4Z5 CLONING ARTIFACT SEQRES 1 A 357 MET LYS HIS HIS HIS HIS HIS HIS HIS SER ASP TYR ASP SEQRES 2 A 357 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY SER ALA SEQRES 3 A 357 ALA ASN ALA ALA GLY PRO ALA SER ARG TYR ASP VAL THR SEQRES 4 A 357 LEU ASP GLN SER ASP ALA GLU LEU VAL GLU GLU ILE ALA SEQRES 5 A 357 TRP LYS LEU ALA THR GLN ALA THR GLY ARG PRO ASP ASP SEQRES 6 A 357 ALA GLU TRP VAL GLU ALA ALA ARG ASN ALA TRP HIS ALA SEQRES 7 A 357 TRP PRO ALA THR LEU ARG ARG ASP LEU ALA GLY PHE ARG SEQRES 8 A 357 ARG ASP SER GLY PRO ASP GLY ALA ILE VAL LEU ARG GLY SEQRES 9 A 357 LEU PRO VAL ASP SER MET GLY LEU PRO PRO THR PRO ARG SEQRES 10 A 357 VAL ASN GLY SER VAL GLN ARG GLU ALA SER LEU GLY ALA SEQRES 11 A 357 ALA VAL LEU LEU MET THR ALA CYS GLY LEU GLY ASP PRO SEQRES 12 A 357 GLY ALA PHE LEU PRO GLU LYS ASN GLY ALA LEU VAL GLN SEQRES 13 A 357 ASP VAL VAL PRO VAL PRO GLY MET GLU GLU PHE GLN GLY SEQRES 14 A 357 ASN ALA GLY SER THR LEU LEU THR PHE HIS ASN GLU ASN SEQRES 15 A 357 ALA PHE HIS GLU HIS ARG PRO ASP PHE VAL MET LEU LEU SEQRES 16 A 357 CYS LEU ARG ALA ASP PRO THR GLY ARG ALA GLY LEU ARG SEQRES 17 A 357 THR ALA CYS VAL ARG ARG VAL LEU PRO LEU LEU SER ASP SEQRES 18 A 357 SER THR VAL ASP ALA LEU TRP ALA PRO GLU PHE ARG THR SEQRES 19 A 357 ALA PRO PRO PRO SER PHE GLN LEU SER GLY PRO GLU GLU SEQRES 20 A 357 ALA PRO ALA PRO VAL LEU LEU GLY ASP ARG SER ASP PRO SEQRES 21 A 357 ASP LEU ARG VAL ASP LEU ALA ALA THR GLU PRO VAL THR SEQRES 22 A 357 GLU ARG ALA ALA GLU ALA LEU ARG GLU LEU GLN ALA HIS SEQRES 23 A 357 PHE ASP ALA THR ALA VAL THR HIS ARG LEU LEU PRO GLY SEQRES 24 A 357 GLU LEU ALA ILE VAL ASP ASN ARG VAL THR VAL HIS GLY SEQRES 25 A 357 ARG THR GLU PHE THR PRO ARG TYR ASP GLY THR ASP ARG SEQRES 26 A 357 TRP LEU GLN ARG THR PHE VAL LEU THR ASP LEU ARG ARG SEQRES 27 A 357 SER ARG ALA MET ARG PRO ALA ASP GLY TYR VAL LEU GLY SEQRES 28 A 357 ALA ALA PRO GLN PRO ALA HET NA A 401 1 HET ACY A 402 4 HETNAM NA SODIUM ION HETNAM ACY ACETIC ACID FORMUL 2 NA NA 1+ FORMUL 3 ACY C2 H4 O2 FORMUL 4 HOH *342(H2 O) HELIX 1 1 ASP A 17 ALA A 35 1 19 HELIX 2 2 ASP A 41 HIS A 53 1 13 HELIX 3 3 PRO A 56 ASP A 69 1 14 HELIX 4 4 SER A 103 GLY A 117 1 15 HELIX 5 5 GLU A 125 ALA A 129 5 5 HELIX 6 6 VAL A 188 LEU A 192 1 5 HELIX 7 7 PRO A 193 LEU A 195 5 3 HELIX 8 8 SER A 196 TRP A 204 1 9 HELIX 9 9 PRO A 213 GLN A 217 5 5 HELIX 10 10 THR A 249 ALA A 267 1 19 HELIX 11 11 ASP A 311 GLY A 323 5 13 SHEET 1 A 6 ASP A 13 THR A 15 0 SHEET 2 A 6 ALA A 75 ARG A 79 1 O ARG A 79 N VAL A 14 SHEET 3 A 6 LEU A 277 ASP A 281 -1 O ILE A 279 N ILE A 76 SHEET 4 A 6 PHE A 167 ARG A 174 -1 N VAL A 168 O VAL A 280 SHEET 5 A 6 TRP A 302 LEU A 309 -1 O GLN A 304 N LEU A 171 SHEET 6 A 6 GLN A 132 VAL A 134 -1 N VAL A 134 O LEU A 303 SHEET 1 B 7 ASP A 13 THR A 15 0 SHEET 2 B 7 ALA A 75 ARG A 79 1 O ARG A 79 N VAL A 14 SHEET 3 B 7 LEU A 277 ASP A 281 -1 O ILE A 279 N ILE A 76 SHEET 4 B 7 PHE A 167 ARG A 174 -1 N VAL A 168 O VAL A 280 SHEET 5 B 7 TRP A 302 LEU A 309 -1 O GLN A 304 N LEU A 171 SHEET 6 B 7 ASP A 118 PHE A 122 -1 N ASP A 118 O LEU A 309 SHEET 7 B 7 VAL A 325 LEU A 326 1 O LEU A 326 N ALA A 121 SHEET 1 C 4 LEU A 152 HIS A 155 0 SHEET 2 C 4 THR A 285 ARG A 289 -1 O ARG A 289 N LEU A 152 SHEET 3 C 4 LEU A 183 CYS A 187 -1 N ARG A 184 O GLY A 288 SHEET 4 C 4 VAL A 268 HIS A 270 -1 O HIS A 270 N LEU A 183 SHEET 1 D 2 PHE A 208 ARG A 209 0 SHEET 2 D 2 GLU A 246 PRO A 247 -1 O GLU A 246 N ARG A 209 SHEET 1 E 2 LEU A 229 GLY A 231 0 SHEET 2 E 2 PRO A 236 LEU A 238 -1 O ASP A 237 N LEU A 230 LINK NE2 HIS A 155 NA NA A 401 1555 1555 2.44 LINK OE1 GLU A 157 NA NA A 401 1555 1555 2.01 LINK NE2 HIS A 287 NA NA A 401 1555 1555 2.11 LINK NA NA A 401 O HOH A 643 1555 1555 1.96 LINK NA NA A 401 O HOH A 710 1555 1555 2.55 LINK NA NA A 401 O HOH A 712 1555 1555 2.04 CISPEP 1 ALA A 329 PRO A 330 0 -17.26 SITE 1 AC1 6 HIS A 155 GLU A 157 HIS A 287 HOH A 643 SITE 2 AC1 6 HOH A 710 HOH A 712 SITE 1 AC2 6 VAL A 98 ARG A 100 ASN A 127 LEU A 151 SITE 2 AC2 6 HOH A 648 HOH A 682 CRYST1 91.610 91.610 90.878 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010916 0.006302 0.000000 0.00000 SCALE2 0.000000 0.012605 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011004 0.00000