HEADER SIGNALING PROTEIN 07-JAN-07 2OGP TITLE SOLUTION STRUCTURE OF THE SECOND PDZ DOMAIN OF PAR-3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PARTITIONING-DEFECTIVE 3 HOMOLOG; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PDZ2 DOMAIN; COMPND 5 SYNONYM: PARD-3, PAR-3, ATYPICAL PKC ISOTYPE-SPECIFIC-INTERACTING COMPND 6 PROTEIN, ASIP, ATYPICAL PKC-SPECIFIC- BINDING PROTEIN, ASBP; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET32A KEYWDS CELL POLARITY, PAR-3, PDZ DOMAIN, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 MDLTYP MINIMIZED AVERAGE AUTHOR W.FENG,H.WU,J.CHEN,L.-N.CHAN,M.ZHANG REVDAT 4 27-DEC-23 2OGP 1 REMARK REVDAT 3 16-MAR-22 2OGP 1 REMARK REVDAT 2 24-FEB-09 2OGP 1 VERSN REVDAT 1 25-DEC-07 2OGP 0 JRNL AUTH H.WU,W.FENG,J.CHEN,L.-N.CHAN,S.HUANG,M.ZHANG JRNL TITL PDZ DOMAINS OF PAR-3 AS POTENTIAL PHOSPHOINOSITIDE SIGNALING JRNL TITL 2 INTEGRATORS JRNL REF MOL.CELL V. 28 886 2007 JRNL REFN ISSN 1097-2765 JRNL PMID 18082612 JRNL DOI 10.1016/J.MOLCEL.2007.10.028 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1, CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE REMARK 3 -KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE,SIMONSON, REMARK 3 WARREN (CNS), BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE, REMARK 3 JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE,SIMONSON,WARREN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2OGP COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1000041113. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 100MM POTASSIUM PHOSPHATE REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1.5MM UNLABELLED PAR-3 PDZ2; REMARK 210 100MM POTASSIUM PHOSPHATE; 99.9% REMARK 210 D2O; 1.5MM UNIFORMLY 15N REMARK 210 LABELLED PAR-3 PDZ2; 100MM REMARK 210 POTASSIUM PHOSPHATE; 90% H2O, 10% REMARK 210 D2O; 1.5MM UNIFORMLY 15N/13C REMARK 210 LABELLED PAR-3 PDZ2; 100MM REMARK 210 POTASSIUM PHOSPHATE; 90% H2O, 10% REMARK 210 D2O; 1.5MM UNIFORMLY 15N/13C REMARK 210 LABELLED PAR-3 PDZ2; 100MM REMARK 210 POTASSIUM PHOSPHATE; 99.9% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY; HNCO; HNCACB; REMARK 210 CBCA(CO)NH; 3D_13C-SEPARATED_ REMARK 210 NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 31 -58.99 69.59 REMARK 500 1 SER A 48 109.38 -163.05 REMARK 500 1 VAL A 53 105.56 -54.05 REMARK 500 1 ASN A 55 145.45 -173.99 REMARK 500 1 ARG A 67 -45.66 -134.29 REMARK 500 1 LYS A 69 -169.64 -106.39 REMARK 500 1 LYS A 85 -93.47 -55.95 REMARK 500 1 SER A 86 172.74 159.85 REMARK 500 2 SER A 48 110.17 -160.18 REMARK 500 2 ARG A 67 -59.96 -138.13 REMARK 500 2 LYS A 69 -169.07 -110.16 REMARK 500 2 LYS A 85 -112.87 -113.89 REMARK 500 2 SER A 86 165.89 178.90 REMARK 500 2 MET A 99 153.61 -49.35 REMARK 500 2 GLU A 100 76.01 59.60 REMARK 500 2 GLU A 111 -178.31 -56.93 REMARK 500 2 GLU A 112 41.64 -96.14 REMARK 500 3 THR A 31 29.18 47.30 REMARK 500 3 GLU A 32 43.30 -152.87 REMARK 500 3 ASN A 55 149.40 176.02 REMARK 500 3 ARG A 67 -45.79 -133.51 REMARK 500 3 LYS A 69 -169.93 -108.92 REMARK 500 3 ALA A 83 36.88 -96.77 REMARK 500 3 LYS A 85 -112.74 -125.69 REMARK 500 3 SER A 86 177.32 174.92 REMARK 500 3 GLU A 100 75.23 60.10 REMARK 500 4 ARG A 18 65.33 -167.90 REMARK 500 4 THR A 31 -48.04 -150.44 REMARK 500 4 LEU A 34 13.89 -140.14 REMARK 500 4 LYS A 85 -91.67 -92.48 REMARK 500 4 SER A 86 162.99 162.76 REMARK 500 4 GLU A 100 84.93 60.83 REMARK 500 4 GLU A 111 133.03 63.74 REMARK 500 5 THR A 31 -54.88 -120.02 REMARK 500 5 LEU A 34 15.74 -140.72 REMARK 500 5 ASP A 42 70.77 59.65 REMARK 500 5 VAL A 53 101.66 -59.85 REMARK 500 5 ARG A 59 82.93 -152.38 REMARK 500 5 ARG A 67 -46.03 -138.40 REMARK 500 5 LYS A 85 -97.84 -126.61 REMARK 500 5 SER A 86 166.69 166.56 REMARK 500 5 GLU A 100 90.14 60.70 REMARK 500 5 GLU A 112 35.46 -98.39 REMARK 500 6 ASP A 42 65.91 62.91 REMARK 500 6 ARG A 59 81.11 -156.74 REMARK 500 6 ALA A 83 80.48 -67.11 REMARK 500 6 LYS A 85 -97.63 -90.46 REMARK 500 6 SER A 86 178.45 177.88 REMARK 500 6 GLU A 100 84.13 60.36 REMARK 500 7 THR A 31 29.83 48.64 REMARK 500 REMARK 500 THIS ENTRY HAS 168 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2OGP A 17 113 UNP Q9Z340 PARD3_RAT 454 550 SEQRES 1 A 97 LYS ARG VAL GLY LYS ARG LEU ASN ILE GLN LEU LYS LYS SEQRES 2 A 97 GLY THR GLU GLY LEU GLY PHE SER ILE THR SER ARG ASP SEQRES 3 A 97 VAL THR ILE GLY GLY SER ALA PRO ILE TYR VAL LYS ASN SEQRES 4 A 97 ILE LEU PRO ARG GLY ALA ALA ILE GLN ASP GLY ARG LEU SEQRES 5 A 97 LYS ALA GLY ASP ARG LEU ILE GLU VAL ASN GLY VAL ASP SEQRES 6 A 97 LEU ALA GLY LYS SER GLN GLU GLU VAL VAL SER LEU LEU SEQRES 7 A 97 ARG SER THR LYS MET GLU GLY THR VAL SER LEU LEU VAL SEQRES 8 A 97 PHE ARG GLN GLU GLU ALA HELIX 1 1 GLY A 60 GLY A 66 1 7 HELIX 2 2 SER A 86 THR A 97 1 12 SHEET 1 A 4 LYS A 21 LYS A 28 0 SHEET 2 A 4 THR A 102 ARG A 109 -1 O LEU A 105 N ILE A 25 SHEET 3 A 4 ASP A 72 VAL A 77 -1 N GLU A 76 O LEU A 106 SHEET 4 A 4 VAL A 80 ASP A 81 -1 O VAL A 80 N VAL A 77 SHEET 1 B 2 PHE A 36 SER A 40 0 SHEET 2 B 2 ILE A 51 ILE A 56 -1 O TYR A 52 N THR A 39 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1