HEADER HYDROLASE 11-JAN-07 2OIX TITLE XANTHOMONAS XOPD C470A MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: XANTHOMONAS OUTER PROTEIN D; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC FRAGMENT, INACTIVE MUTANT (RESIDUES 335-520); COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XANTHOMONAS EUVESICATORIA; SOURCE 3 ORGANISM_TAXID: 456327; SOURCE 4 GENE: XOPD; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21/DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX-RTEV KEYWDS CLAN CE FAMILY 48 CYSTEINE PROTEASE, TYPE III SECRETED EFFECTOR, KEYWDS 2 DESUMOYLATING ENZYME, SECRETED VIRULENCE FACTER, PEPTIDASE ACTIVITY, KEYWDS 3 ISOPEPTIDASE ACTIVITY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.CHOSED,D.R.TOMCHICK,C.A.BRAUTIGAM,M.MACHIUS,K.ORTH REVDAT 5 30-AUG-23 2OIX 1 REMARK REVDAT 4 20-OCT-21 2OIX 1 SEQADV REVDAT 3 13-JUL-11 2OIX 1 VERSN REVDAT 2 24-FEB-09 2OIX 1 VERSN REVDAT 1 29-MAY-07 2OIX 0 JRNL AUTH R.CHOSED,D.R.TOMCHICK,C.A.BRAUTIGAM,S.MUKHERJEE,V.S.NEGI, JRNL AUTH 2 M.MACHIUS,K.ORTH JRNL TITL STRUCTURAL ANALYSIS OF XANTHOMONAS XOPD PROVIDES INSIGHTS JRNL TITL 2 INTO SUBSTRATE SPECIFICITY OF UBIQUITIN-LIKE PROTEIN JRNL TITL 3 PROTEASES. JRNL REF J.BIOL.CHEM. V. 282 6773 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17204475 JRNL DOI 10.1074/JBC.M608730200 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.CHOSED,S.MUKHERJEE,L.M.LOIS,K.ORTH REMARK 1 TITL EVOLUTION OF A SIGNALLING SYSTEM THAT INCORPORATES BOTH REMARK 1 TITL 2 REDUNDANCY AND DIVERSITY: ARABIDOPSIS SUMOYLATION. REMARK 1 REF BIOCHEM.J. V. 398 521 2006 REMARK 1 REFN ISSN 0264-6021 REMARK 1 REFERENCE 2 REMARK 1 AUTH A.HOTSON,R.CHOSED,H.SHU,K.ORTH,M.B.MUDGETT REMARK 1 TITL XANTHOMONAS TYPE III EFFECTOR XOPD TARGETS SUMO-CONJUGATED REMARK 1 TITL 2 PROTEINS IN PLANTA. REMARK 1 REF MOL.MICROBIOL. V. 50 377 2003 REMARK 1 REFN ISSN 0950-382X REMARK 1 REFERENCE 3 REMARK 1 AUTH E.MOSSESSOVA,C.D.LIMA REMARK 1 TITL ULP1-SUMO CRYSTAL STRUCTURE AND GENETIC ANALYSIS REVEAL REMARK 1 TITL 2 CONSERVED INTERACTIONS AND A REGULATORY ELEMENT ESSENTIAL REMARK 1 TITL 3 FOR CELL GROWTH IN YEAST REMARK 1 REF MOL.CELL V. 5 865 2000 REMARK 1 REFN ISSN 1097-2765 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 16804 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 513 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 987 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 28 REMARK 3 BIN FREE R VALUE : 0.2890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1408 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 91 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 30.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.75000 REMARK 3 B22 (A**2) : -1.75000 REMARK 3 B33 (A**2) : 3.50000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.143 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.141 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.120 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.850 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1439 ; 0.016 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1958 ; 1.574 ; 1.948 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 176 ; 5.576 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 77 ;35.339 ;23.506 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 225 ;14.385 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;20.876 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 214 ; 0.114 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1133 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 607 ; 0.200 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 954 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 90 ; 0.140 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 24 ; 0.187 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.133 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 904 ; 1.084 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1417 ; 1.703 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 597 ; 2.377 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 541 ; 3.468 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 336 A 343 REMARK 3 ORIGIN FOR THE GROUP (A): -34.0224 40.7159 3.2395 REMARK 3 T TENSOR REMARK 3 T11: 0.0977 T22: 0.2539 REMARK 3 T33: 0.0019 T12: -0.1566 REMARK 3 T13: -0.1344 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 8.0742 L22: 19.4344 REMARK 3 L33: 14.6049 L12: 4.8365 REMARK 3 L13: -10.8207 L23: -7.7902 REMARK 3 S TENSOR REMARK 3 S11: -0.0849 S12: 1.3498 S13: 0.2634 REMARK 3 S21: -1.3532 S22: 0.8049 S23: 1.6147 REMARK 3 S31: 0.1696 S32: -2.1068 S33: -0.7200 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 344 A 374 REMARK 3 ORIGIN FOR THE GROUP (A): -19.3708 36.9042 12.1477 REMARK 3 T TENSOR REMARK 3 T11: 0.1477 T22: 0.0244 REMARK 3 T33: 0.1145 T12: -0.0190 REMARK 3 T13: 0.0143 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 2.7938 L22: 1.6025 REMARK 3 L33: 3.3337 L12: 0.5810 REMARK 3 L13: -0.2105 L23: 0.1366 REMARK 3 S TENSOR REMARK 3 S11: -0.1153 S12: 0.2666 S13: -0.4310 REMARK 3 S21: -0.0611 S22: 0.0315 S23: -0.3978 REMARK 3 S31: 0.5104 S32: 0.0176 S33: 0.0838 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 375 A 393 REMARK 3 ORIGIN FOR THE GROUP (A): -30.5127 36.3390 27.0350 REMARK 3 T TENSOR REMARK 3 T11: 0.3913 T22: 0.0432 REMARK 3 T33: -0.1315 T12: -0.2420 REMARK 3 T13: -0.0156 T23: 0.0270 REMARK 3 L TENSOR REMARK 3 L11: 27.4027 L22: 0.5095 REMARK 3 L33: 8.9722 L12: 3.0554 REMARK 3 L13: -1.9383 L23: 0.8055 REMARK 3 S TENSOR REMARK 3 S11: 0.5673 S12: -1.1769 S13: -0.8143 REMARK 3 S21: 0.8351 S22: -0.5837 S23: 0.0131 REMARK 3 S31: 1.5172 S32: -0.7953 S33: 0.0164 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 394 A 429 REMARK 3 ORIGIN FOR THE GROUP (A): -22.9160 46.9139 18.5106 REMARK 3 T TENSOR REMARK 3 T11: 0.1224 T22: 0.1291 REMARK 3 T33: 0.0460 T12: -0.0126 REMARK 3 T13: -0.0072 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 4.2944 L22: 3.2276 REMARK 3 L33: 2.4413 L12: -0.1335 REMARK 3 L13: 0.7373 L23: -0.8688 REMARK 3 S TENSOR REMARK 3 S11: 0.0065 S12: -0.2572 S13: -0.0300 REMARK 3 S21: 0.0784 S22: -0.0264 S23: 0.0792 REMARK 3 S31: 0.1465 S32: -0.1228 S33: 0.0200 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 430 A 435 REMARK 3 ORIGIN FOR THE GROUP (A): -33.6681 58.4397 9.3445 REMARK 3 T TENSOR REMARK 3 T11: 0.1776 T22: 0.2021 REMARK 3 T33: 0.1758 T12: 0.0999 REMARK 3 T13: -0.0170 T23: 0.0497 REMARK 3 L TENSOR REMARK 3 L11: 32.5168 L22: 7.9043 REMARK 3 L33: 13.0254 L12: 10.7212 REMARK 3 L13: -8.8759 L23: 3.8798 REMARK 3 S TENSOR REMARK 3 S11: 1.2684 S12: 0.5575 S13: 2.5663 REMARK 3 S21: 0.0449 S22: -0.9918 S23: 2.7311 REMARK 3 S31: -1.1438 S32: -0.8753 S33: -0.2766 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 436 A 463 REMARK 3 ORIGIN FOR THE GROUP (A): -28.3261 53.1306 21.2439 REMARK 3 T TENSOR REMARK 3 T11: 0.0743 T22: 0.0573 REMARK 3 T33: 0.0943 T12: -0.0070 REMARK 3 T13: 0.0114 T23: -0.0637 REMARK 3 L TENSOR REMARK 3 L11: 4.2811 L22: 2.5600 REMARK 3 L33: 3.9615 L12: -0.5098 REMARK 3 L13: -0.1652 L23: -0.1838 REMARK 3 S TENSOR REMARK 3 S11: 0.0807 S12: -0.2066 S13: 0.3843 REMARK 3 S21: 0.0702 S22: -0.0579 S23: 0.1522 REMARK 3 S31: -0.0949 S32: -0.0040 S33: -0.0228 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 464 A 499 REMARK 3 ORIGIN FOR THE GROUP (A): -17.3672 49.7385 8.4038 REMARK 3 T TENSOR REMARK 3 T11: 0.1421 T22: 0.1106 REMARK 3 T33: 0.0363 T12: -0.0314 REMARK 3 T13: 0.0047 T23: 0.0353 REMARK 3 L TENSOR REMARK 3 L11: 5.3706 L22: 2.7266 REMARK 3 L33: 3.3587 L12: 2.6572 REMARK 3 L13: 0.0333 L23: 0.7712 REMARK 3 S TENSOR REMARK 3 S11: -0.2040 S12: 0.3153 S13: 0.0855 REMARK 3 S21: -0.2622 S22: 0.0621 S23: -0.0626 REMARK 3 S31: -0.0453 S32: -0.0708 S33: 0.1419 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 500 A 515 REMARK 3 ORIGIN FOR THE GROUP (A): -22.6162 42.5339 -1.8924 REMARK 3 T TENSOR REMARK 3 T11: 0.1424 T22: 0.2376 REMARK 3 T33: -0.1094 T12: -0.1593 REMARK 3 T13: 0.0233 T23: 0.0201 REMARK 3 L TENSOR REMARK 3 L11: 9.3734 L22: 9.3870 REMARK 3 L33: 8.3680 L12: 5.2891 REMARK 3 L13: 0.9749 L23: 2.8590 REMARK 3 S TENSOR REMARK 3 S11: -0.6866 S12: 1.2864 S13: -0.4237 REMARK 3 S21: -1.4075 S22: 0.6741 S23: 0.0831 REMARK 3 S31: 0.3079 S32: -0.0235 S33: 0.0125 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2OIX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1000041192. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97905 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NONE REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-3 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17346 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 25.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.58000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 2OIV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15 MG/ML PROTEIN IN 20 MM TRIS-HCL PH REMARK 280 7.5, 75 MM KCL, AND 0.5 MM DTT AND 1.4 - 1.6 M SODIUM POTASSIUM REMARK 280 PHOSPHATE, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 22.50650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 45.97650 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 45.97650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 11.25325 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 45.97650 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 45.97650 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 33.75975 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 45.97650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.97650 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 11.25325 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 45.97650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.97650 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 33.75975 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 22.50650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 335 REMARK 465 ASP A 466 REMARK 465 GLY A 467 REMARK 465 GLU A 516 REMARK 465 GLN A 517 REMARK 465 ALA A 518 REMARK 465 PRO A 519 REMARK 465 ALA A 520 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A 380 C PRO A 380 O 0.140 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 360 -1.01 76.00 REMARK 500 SER A 377 152.85 -49.39 REMARK 500 ASP A 393 6.80 -66.94 REMARK 500 ALA A 408 -50.44 -132.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2OIV RELATED DB: PDB REMARK 900 WILD TYPE PROTEIN. DBREF 2OIX A 335 520 UNP Q3BYJ5 Q3BYJ5_XANC5 335 520 SEQADV 2OIX ALA A 470 UNP Q3BYJ5 CYS 470 ENGINEERED MUTATION SEQRES 1 A 186 ALA THR SER TRP LEU LEU ASP GLY HIS LEU ARG ALA TYR SEQRES 2 A 186 THR ASP ASP LEU ALA ARG ARG LEU ARG GLY GLU PRO ASN SEQRES 3 A 186 ALA HIS LEU LEU HIS PHE ALA ASP SER GLN VAL VAL THR SEQRES 4 A 186 MET LEU SER SER ALA ASP PRO ASP GLN GLN ALA ARG ALA SEQRES 5 A 186 GLN ARG LEU LEU ALA GLY ASP ASP ILE PRO PRO ILE VAL SEQRES 6 A 186 PHE LEU PRO ILE ASN GLN PRO ASN ALA HIS TRP SER LEU SEQRES 7 A 186 LEU VAL VAL ASP ARG ARG ASN LYS ASP ALA VAL ALA ALA SEQRES 8 A 186 TYR HIS TYR ASP SER MET ALA GLN LYS ASP PRO GLN GLN SEQRES 9 A 186 ARG TYR LEU ALA ASP MET ALA ALA TYR HIS LEU GLY LEU SEQRES 10 A 186 ASP TYR GLN GLN THR HIS GLU MET PRO ILE ALA ILE GLN SEQRES 11 A 186 SER ASP GLY TYR SER ALA GLY ASP HIS VAL LEU THR GLY SEQRES 12 A 186 ILE GLU VAL LEU ALA HIS ARG VAL LEU ASP GLY THR PHE SEQRES 13 A 186 ASP TYR ALA GLY GLY ARG ASP LEU THR ASP ILE GLU PRO SEQRES 14 A 186 ASP ARG GLY LEU ILE ARG ASP ARG LEU ALA GLN ALA GLU SEQRES 15 A 186 GLN ALA PRO ALA FORMUL 2 HOH *91(H2 O) HELIX 1 1 LEU A 340 LEU A 355 1 16 HELIX 2 2 ASN A 360 HIS A 362 5 3 HELIX 3 3 ASP A 368 LEU A 375 1 8 HELIX 4 4 ASP A 379 GLY A 392 1 14 HELIX 5 5 ASP A 435 LEU A 449 1 15 HELIX 6 6 ASP A 452 THR A 456 5 5 HELIX 7 7 SER A 469 ASP A 487 1 19 HELIX 8 8 ASP A 504 GLN A 514 1 11 SHEET 1 A 5 LEU A 364 PHE A 366 0 SHEET 2 A 5 ILE A 398 GLN A 405 1 O PHE A 400 N HIS A 365 SHEET 3 A 5 HIS A 409 ASP A 416 -1 O LEU A 413 N LEU A 401 SHEET 4 A 5 ALA A 424 TYR A 428 -1 O ALA A 424 N ASP A 416 SHEET 5 A 5 HIS A 457 MET A 459 1 O HIS A 457 N HIS A 427 CRYST1 91.953 91.953 45.013 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010875 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010875 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022216 0.00000