HEADER ISOMERASE 19-JAN-07 2OLW TITLE CRYSTAL STRUCTURE OF E. COLI PSEUDOURIDINE SYNTHASE RLUE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE E; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RRNA- URIDINE ISOMERASE E, RRNA PSEUDOURIDYLATE SYNTHASE E; COMPND 5 EC: 5.4.99.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: RLUE; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-28B KEYWDS BIFURCATED BETA SHEET, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.PAN,J.D.HO,R.M.STROUD,J.FINER-MOORE REVDAT 5 30-AUG-23 2OLW 1 REMARK REVDAT 4 18-OCT-17 2OLW 1 REMARK REVDAT 3 24-FEB-09 2OLW 1 VERSN REVDAT 2 03-APR-07 2OLW 1 JRNL REVDAT 1 13-MAR-07 2OLW 0 JRNL AUTH H.PAN,J.D.HO,R.M.STROUD,J.FINER-MOORE JRNL TITL THE CRYSTAL STRUCTURE OF E. COLI RRNA PSEUDOURIDINE SYNTHASE JRNL TITL 2 RLUE. JRNL REF J.MOL.BIOL. V. 367 1459 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17320904 JRNL DOI 10.1016/J.JMB.2007.01.084 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.8 REMARK 3 NUMBER OF REFLECTIONS : 45764 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2319 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3531 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.35 REMARK 3 BIN R VALUE (WORKING SET) : 0.2110 REMARK 3 BIN FREE R VALUE SET COUNT : 218 REMARK 3 BIN FREE R VALUE : 0.2320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2818 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 37 REMARK 3 SOLVENT ATOMS : 257 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.115 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.117 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.062 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.692 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2927 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3982 ; 1.457 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 358 ; 5.861 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 134 ;33.585 ;22.836 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 470 ;13.874 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;21.079 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 438 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2264 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1235 ; 0.198 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1982 ; 0.311 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 243 ; 0.161 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 64 ; 0.175 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 22 ; 0.166 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1843 ; 1.195 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2904 ; 1.954 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1228 ; 2.831 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1078 ; 4.245 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2OLW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1000041298. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-AUG-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.127 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : DOUBLE CRYSTAL MONOCHROMETER REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49168 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.77800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1KSV WITH THE N-TERMINAL DOMAIN REMOVED REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4 MG/ML PROTEIN IN 10 MM TRIS, PH 7.5, REMARK 280 WITH 2MM EDTA AND 2MM DTT EQUILIBRATED AGAINST 22% (W/V) MME PEG REMARK 280 2000, 200 MM AMMONIUM SULFATE AND 100 MM SODIUM ACETATE, PH 5.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.50750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.09100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.44350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.09100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.50750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.44350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL FORM OF THE PROTEIN IS A MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 GLN A 3 REMARK 465 PHE A 4 REMARK 465 ILE A 5 REMARK 465 ILE A 6 REMARK 465 SER A 7 REMARK 465 GLU A 8 REMARK 465 ASN A 9 REMARK 465 THR A 10 REMARK 465 MET A 11 REMARK 465 GLN A 12 REMARK 465 LYS A 13 REMARK 465 THR A 14 REMARK 465 SER A 15 REMARK 465 PHE A 16 REMARK 465 ARG A 17 REMARK 465 ASN A 18 REMARK 465 HIS A 19 REMARK 465 GLN A 20 REMARK 465 VAL A 21 REMARK 465 LYS A 22 REMARK 465 ARG A 23 REMARK 465 PHE A 24 REMARK 465 SER A 25 REMARK 465 SER A 26 REMARK 465 GLN A 27 REMARK 465 ARG A 28 REMARK 465 SER A 29 REMARK 465 THR A 30 REMARK 465 ARG A 31 REMARK 465 ARG A 32 REMARK 465 LYS A 33 REMARK 465 PRO A 34 REMARK 465 GLU A 35 REMARK 465 ASN A 36 REMARK 465 GLU A 159 REMARK 465 ASP A 217 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 GLN B 3 REMARK 465 PHE B 4 REMARK 465 ILE B 5 REMARK 465 ILE B 6 REMARK 465 SER B 7 REMARK 465 GLU B 8 REMARK 465 ASN B 9 REMARK 465 THR B 10 REMARK 465 MET B 11 REMARK 465 GLN B 12 REMARK 465 LYS B 13 REMARK 465 THR B 14 REMARK 465 SER B 15 REMARK 465 PHE B 16 REMARK 465 ARG B 17 REMARK 465 ASN B 18 REMARK 465 HIS B 19 REMARK 465 GLN B 20 REMARK 465 VAL B 21 REMARK 465 LYS B 22 REMARK 465 ARG B 23 REMARK 465 PHE B 24 REMARK 465 SER B 25 REMARK 465 SER B 26 REMARK 465 GLN B 27 REMARK 465 ARG B 28 REMARK 465 SER B 29 REMARK 465 THR B 30 REMARK 465 ARG B 31 REMARK 465 ARG B 32 REMARK 465 LYS B 33 REMARK 465 PRO B 34 REMARK 465 GLU B 35 REMARK 465 ASN B 36 REMARK 465 GLN B 37 REMARK 465 GLU B 159 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 70 CB CG CD OE1 NE2 REMARK 470 ARG A 160 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 161 CB CG CD CE NZ REMARK 470 ILE A 163 CB CG1 CG2 CD1 REMARK 470 GLN B 70 CB CG CD OE1 NE2 REMARK 470 ARG B 160 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 161 CB CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 1045 O HOH B 1146 2.07 REMARK 500 OE1 GLU B 146 O HOH B 1136 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 161 -63.00 84.08 REMARK 500 ASP A 205 119.43 -38.22 REMARK 500 THR B 105 64.15 -116.85 REMARK 500 SER B 162 -32.38 -153.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTT B 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY B 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY B 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY B 1007 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2OML RELATED DB: PDB DBREF 2OLW A 1 217 UNP P75966 RLUE_ECOLI 1 217 DBREF 2OLW B 1 217 UNP P75966 RLUE_ECOLI 1 217 SEQRES 1 A 217 MET ARG GLN PHE ILE ILE SER GLU ASN THR MET GLN LYS SEQRES 2 A 217 THR SER PHE ARG ASN HIS GLN VAL LYS ARG PHE SER SER SEQRES 3 A 217 GLN ARG SER THR ARG ARG LYS PRO GLU ASN GLN PRO THR SEQRES 4 A 217 ARG VAL ILE LEU PHE ASN LYS PRO TYR ASP VAL LEU PRO SEQRES 5 A 217 GLN PHE THR ASP GLU ALA GLY ARG LYS THR LEU LYS GLU SEQRES 6 A 217 PHE ILE PRO VAL GLN GLY VAL TYR ALA ALA GLY ARG LEU SEQRES 7 A 217 ASP ARG ASP SER GLU GLY LEU LEU VAL LEU THR ASN ASN SEQRES 8 A 217 GLY ALA LEU GLN ALA ARG LEU THR GLN PRO GLY LYS ARG SEQRES 9 A 217 THR GLY LYS ILE TYR TYR VAL GLN VAL GLU GLY ILE PRO SEQRES 10 A 217 THR GLN ASP ALA LEU GLU ALA LEU ARG ASN GLY VAL THR SEQRES 11 A 217 LEU ASN ASP GLY PRO THR LEU PRO ALA GLY ALA GLU LEU SEQRES 12 A 217 VAL ASP GLU PRO ALA TRP LEU TRP PRO ARG ASN PRO PRO SEQRES 13 A 217 ILE ARG GLU ARG LYS SER ILE PRO THR SER TRP LEU LYS SEQRES 14 A 217 ILE THR LEU TYR GLU GLY ARG ASN ARG GLN VAL ARG ARG SEQRES 15 A 217 MET THR ALA HIS VAL GLY PHE PRO THR LEU ARG LEU ILE SEQRES 16 A 217 ARG TYR ALA MET GLY ASP TYR SER LEU ASP ASN LEU ALA SEQRES 17 A 217 ASN GLY GLU TRP ARG GLU VAL THR ASP SEQRES 1 B 217 MET ARG GLN PHE ILE ILE SER GLU ASN THR MET GLN LYS SEQRES 2 B 217 THR SER PHE ARG ASN HIS GLN VAL LYS ARG PHE SER SER SEQRES 3 B 217 GLN ARG SER THR ARG ARG LYS PRO GLU ASN GLN PRO THR SEQRES 4 B 217 ARG VAL ILE LEU PHE ASN LYS PRO TYR ASP VAL LEU PRO SEQRES 5 B 217 GLN PHE THR ASP GLU ALA GLY ARG LYS THR LEU LYS GLU SEQRES 6 B 217 PHE ILE PRO VAL GLN GLY VAL TYR ALA ALA GLY ARG LEU SEQRES 7 B 217 ASP ARG ASP SER GLU GLY LEU LEU VAL LEU THR ASN ASN SEQRES 8 B 217 GLY ALA LEU GLN ALA ARG LEU THR GLN PRO GLY LYS ARG SEQRES 9 B 217 THR GLY LYS ILE TYR TYR VAL GLN VAL GLU GLY ILE PRO SEQRES 10 B 217 THR GLN ASP ALA LEU GLU ALA LEU ARG ASN GLY VAL THR SEQRES 11 B 217 LEU ASN ASP GLY PRO THR LEU PRO ALA GLY ALA GLU LEU SEQRES 12 B 217 VAL ASP GLU PRO ALA TRP LEU TRP PRO ARG ASN PRO PRO SEQRES 13 B 217 ILE ARG GLU ARG LYS SER ILE PRO THR SER TRP LEU LYS SEQRES 14 B 217 ILE THR LEU TYR GLU GLY ARG ASN ARG GLN VAL ARG ARG SEQRES 15 B 217 MET THR ALA HIS VAL GLY PHE PRO THR LEU ARG LEU ILE SEQRES 16 B 217 ARG TYR ALA MET GLY ASP TYR SER LEU ASP ASN LEU ALA SEQRES 17 B 217 ASN GLY GLU TRP ARG GLU VAL THR ASP HET SO4 A1001 5 HET ACY A1004 4 HET ACY A1005 4 HET DTT B 218 8 HET ACY B1002 4 HET ACY B1003 4 HET ACY B1006 4 HET ACY B1007 4 HETNAM SO4 SULFATE ION HETNAM ACY ACETIC ACID HETNAM DTT 2,3-DIHYDROXY-1,4-DITHIOBUTANE HETSYN DTT 1,4-DITHIOTHREITOL FORMUL 3 SO4 O4 S 2- FORMUL 4 ACY 6(C2 H4 O2) FORMUL 6 DTT C4 H10 O2 S2 FORMUL 11 HOH *257(H2 O) HELIX 1 1 THR A 62 PHE A 66 5 5 HELIX 2 2 ASN A 91 GLN A 100 1 10 HELIX 3 3 THR A 118 GLY A 128 1 11 HELIX 4 4 ARG A 178 VAL A 187 1 10 HELIX 5 5 LYS B 64 PHE B 66 5 3 HELIX 6 6 ASN B 91 GLN B 100 1 10 HELIX 7 7 THR B 118 GLY B 128 1 11 HELIX 8 8 ARG B 178 GLY B 188 1 11 SHEET 1 A 4 TYR A 73 ALA A 74 0 SHEET 2 A 4 GLU A 83 THR A 89 -1 O THR A 89 N TYR A 73 SHEET 3 A 4 THR A 191 MET A 199 1 O ARG A 196 N LEU A 85 SHEET 4 A 4 TYR A 202 SER A 203 -1 O TYR A 202 N MET A 199 SHEET 1 B 7 GLY A 140 VAL A 144 0 SHEET 2 B 7 THR A 165 LEU A 172 -1 O LYS A 169 N GLU A 142 SHEET 3 B 7 LYS A 107 GLU A 114 -1 N TYR A 109 O ILE A 170 SHEET 4 B 7 THR A 191 MET A 199 -1 O LEU A 192 N GLN A 112 SHEET 5 B 7 GLU A 83 THR A 89 1 N LEU A 85 O ARG A 196 SHEET 6 B 7 VAL A 41 LYS A 46 -1 N ILE A 42 O LEU A 88 SHEET 7 B 7 TRP A 212 THR A 216 -1 O ARG A 213 N LEU A 43 SHEET 1 C 2 THR A 130 LEU A 131 0 SHEET 2 C 2 GLY A 134 PRO A 135 -1 O GLY A 134 N LEU A 131 SHEET 1 D 4 TYR B 73 ALA B 74 0 SHEET 2 D 4 GLU B 83 THR B 89 -1 O THR B 89 N TYR B 73 SHEET 3 D 4 THR B 191 MET B 199 1 O ARG B 196 N LEU B 85 SHEET 4 D 4 TYR B 202 SER B 203 -1 O TYR B 202 N MET B 199 SHEET 1 E 7 GLY B 140 VAL B 144 0 SHEET 2 E 7 THR B 165 LEU B 172 -1 O LYS B 169 N GLU B 142 SHEET 3 E 7 LYS B 107 GLU B 114 -1 N TYR B 109 O ILE B 170 SHEET 4 E 7 THR B 191 MET B 199 -1 O LEU B 192 N GLN B 112 SHEET 5 E 7 GLU B 83 THR B 89 1 N LEU B 85 O ARG B 196 SHEET 6 E 7 VAL B 41 LYS B 46 -1 N ILE B 42 O LEU B 88 SHEET 7 E 7 TRP B 212 VAL B 215 -1 O ARG B 213 N LEU B 43 SHEET 1 F 2 VAL B 50 LEU B 51 0 SHEET 2 F 2 LYS B 61 THR B 62 1 O LYS B 61 N LEU B 51 SHEET 1 G 2 THR B 130 LEU B 131 0 SHEET 2 G 2 GLY B 134 PRO B 135 -1 O GLY B 134 N LEU B 131 CISPEP 1 ASN A 154 PRO A 155 0 0.90 CISPEP 2 ASN B 154 PRO B 155 0 -3.20 SITE 1 AC1 9 GLN A 53 PHE A 54 THR A 55 THR A 130 SITE 2 AC1 9 HIS A 186 HOH A1011 HOH A1014 HOH A1018 SITE 3 AC1 9 HOH A1051 SITE 1 AC2 9 ARG A 40 PRO A 68 VAL A 69 TRP A 212 SITE 2 AC2 9 GLU A 214 LEU B 51 ARG B 60 ARG B 80 SITE 3 AC2 9 HOH B1045 SITE 1 AC3 3 LEU B 204 ASN B 206 HOH B1083 SITE 1 AC4 3 GLN B 53 PHE B 54 THR B 55 SITE 1 AC5 4 LEU A 131 ASN A 132 ARG A 182 HOH A1022 SITE 1 AC6 3 TYR A 197 ASN A 206 HOH A1073 SITE 1 AC7 5 LYS B 61 GLY B 102 ARG B 104 THR B 105 SITE 2 AC7 5 HOH B1113 SITE 1 AC8 4 ARG A 97 ASP B 145 GLU B 146 HOH B1147 CRYST1 59.015 78.887 84.182 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016945 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012676 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011879 0.00000