HEADER HORMONE 20-JAN-07 2OLY TITLE STRUCTURE OF HUMAN INSULIN IN PRESENCE OF UREA AT PH 7.0 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INSULIN A CHAIN; COMPND 3 CHAIN: A, C, E, G, I, K; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: INSULIN B CHAIN; COMPND 6 CHAIN: B, D, F, H, J, L SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 ORGANISM_TAXID: 9606 KEYWDS R6 CONFORMATION, HORMONE EXPDTA X-RAY DIFFRACTION AUTHOR M.NORRMAN,G.SCHLUCKEBIER REVDAT 7 03-APR-24 2OLY 1 REMARK REVDAT 6 27-DEC-23 2OLY 1 LINK REVDAT 5 07-MAR-18 2OLY 1 REMARK REVDAT 4 13-JUL-11 2OLY 1 VERSN REVDAT 3 24-FEB-09 2OLY 1 VERSN REVDAT 2 01-JAN-08 2OLY 1 JRNL REVDAT 1 04-DEC-07 2OLY 0 JRNL AUTH M.NORRMAN,G.SCHLUCKEBIER JRNL TITL CRYSTALLOGRAPHIC CHARACTERIZATION OF TWO NOVEL CRYSTAL FORMS JRNL TITL 2 OF HUMAN INSULIN INDUCED BY CHAOTROPIC AGENTS AND A SHIFT IN JRNL TITL 3 PH. JRNL REF BMC STRUCT.BIOL. V. 7 83 2007 JRNL REFN ESSN 1472-6807 JRNL PMID 18093308 JRNL DOI 10.1186/1472-6807-7-83 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0021 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 3 NUMBER OF REFLECTIONS : 32471 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1715 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1621 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 62.50 REMARK 3 BIN R VALUE (WORKING SET) : 0.2290 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.3340 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2332 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 105 REMARK 3 SOLVENT ATOMS : 235 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 29.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.115 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.113 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.066 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.488 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2509 ; 0.012 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3396 ; 1.256 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 292 ; 5.692 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 121 ;34.496 ;24.545 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 366 ;11.085 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ; 4.780 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 362 ; 0.109 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1932 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1256 ; 0.216 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1758 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 169 ; 0.178 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 7 ; 0.132 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 47 ; 0.172 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.233 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1513 ; 0.933 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2356 ; 1.527 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1141 ; 2.213 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1036 ; 3.259 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 21 REMARK 3 RESIDUE RANGE : B 1 B 28 REMARK 3 ORIGIN FOR THE GROUP (A): 33.1336 -1.2886 9.8745 REMARK 3 T TENSOR REMARK 3 T11: -0.0309 T22: 0.0351 REMARK 3 T33: -0.0252 T12: -0.0196 REMARK 3 T13: 0.0131 T23: -0.0223 REMARK 3 L TENSOR REMARK 3 L11: 0.8717 L22: 1.0106 REMARK 3 L33: 2.6875 L12: 0.3155 REMARK 3 L13: 1.5261 L23: 0.4346 REMARK 3 S TENSOR REMARK 3 S11: 0.0119 S12: 0.2165 S13: -0.0335 REMARK 3 S21: -0.1032 S22: 0.0352 S23: -0.0583 REMARK 3 S31: -0.1599 S32: 0.3766 S33: -0.0471 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 21 REMARK 3 RESIDUE RANGE : D 1 D 28 REMARK 3 ORIGIN FOR THE GROUP (A): 15.8123 -12.9587 18.9172 REMARK 3 T TENSOR REMARK 3 T11: 0.0071 T22: -0.0311 REMARK 3 T33: -0.0013 T12: -0.0311 REMARK 3 T13: -0.0035 T23: 0.0182 REMARK 3 L TENSOR REMARK 3 L11: 1.1912 L22: 0.3320 REMARK 3 L33: 2.3278 L12: 0.6170 REMARK 3 L13: 0.0986 L23: 0.2207 REMARK 3 S TENSOR REMARK 3 S11: 0.0147 S12: -0.0751 S13: -0.0629 REMARK 3 S21: 0.0066 S22: 0.0090 S23: -0.0429 REMARK 3 S31: 0.2645 S32: -0.0986 S33: -0.0237 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 21 REMARK 3 RESIDUE RANGE : F 1 F 28 REMARK 3 ORIGIN FOR THE GROUP (A): 12.3253 1.0836 1.2751 REMARK 3 T TENSOR REMARK 3 T11: 0.0050 T22: 0.0106 REMARK 3 T33: -0.0427 T12: 0.0364 REMARK 3 T13: -0.0347 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 1.0548 L22: 2.2045 REMARK 3 L33: 1.3583 L12: -0.1640 REMARK 3 L13: -0.6129 L23: -0.1761 REMARK 3 S TENSOR REMARK 3 S11: -0.0083 S12: 0.1571 S13: -0.0266 REMARK 3 S21: -0.0598 S22: 0.0483 S23: 0.1748 REMARK 3 S31: -0.1078 S32: -0.2866 S33: -0.0400 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 1 G 21 REMARK 3 RESIDUE RANGE : H 1 H 28 REMARK 3 ORIGIN FOR THE GROUP (A): 23.5863 -2.3038 27.6842 REMARK 3 T TENSOR REMARK 3 T11: -0.0282 T22: -0.0040 REMARK 3 T33: -0.0152 T12: -0.0014 REMARK 3 T13: -0.0111 T23: 0.0015 REMARK 3 L TENSOR REMARK 3 L11: 1.0531 L22: 0.7461 REMARK 3 L33: 0.7966 L12: 0.1227 REMARK 3 L13: 0.1216 L23: -0.0930 REMARK 3 S TENSOR REMARK 3 S11: 0.0292 S12: -0.0956 S13: -0.0109 REMARK 3 S21: 0.0451 S22: -0.0626 S23: 0.0111 REMARK 3 S31: 0.0176 S32: -0.0267 S33: 0.0334 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : I 1 I 21 REMARK 3 RESIDUE RANGE : J 1 J 28 REMARK 3 ORIGIN FOR THE GROUP (A): 25.5188 12.7986 10.6451 REMARK 3 T TENSOR REMARK 3 T11: 0.0663 T22: -0.0645 REMARK 3 T33: -0.0296 T12: -0.0125 REMARK 3 T13: 0.0174 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 0.9011 L22: 1.0203 REMARK 3 L33: 1.3170 L12: -0.4150 REMARK 3 L13: 0.1538 L23: -1.1054 REMARK 3 S TENSOR REMARK 3 S11: 0.0193 S12: 0.0293 S13: 0.0611 REMARK 3 S21: 0.0485 S22: 0.0200 S23: -0.0500 REMARK 3 S31: -0.1700 S32: 0.0098 S33: -0.0393 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : K 1 K 21 REMARK 3 RESIDUE RANGE : L 1 L 28 REMARK 3 ORIGIN FOR THE GROUP (A): 5.1185 3.7895 15.6617 REMARK 3 T TENSOR REMARK 3 T11: -0.0508 T22: 0.0506 REMARK 3 T33: 0.0036 T12: 0.0760 REMARK 3 T13: -0.0111 T23: -0.0333 REMARK 3 L TENSOR REMARK 3 L11: 1.2416 L22: 2.6052 REMARK 3 L33: 2.0987 L12: 1.1880 REMARK 3 L13: 0.3042 L23: 1.2761 REMARK 3 S TENSOR REMARK 3 S11: 0.2267 S12: -0.0412 S13: 0.1050 REMARK 3 S21: -0.2159 S22: -0.2992 S23: 0.2312 REMARK 3 S31: -0.2502 S32: -0.3632 S33: 0.0725 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2OLY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1000041300. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JAN-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I911-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34195 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 200 DATA REDUNDANCY : 2.100 REMARK 200 R MERGE (I) : 0.03400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 63.8 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : 0.16900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: INSULIN HEXAMER R6 CONFORMATION REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.5M NACL, 4M UREA, 100MM PHOSPHATE REMARK 280 BUFFER, PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.12000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.07500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.12000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.07500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 21800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -260.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J, REMARK 350 AND CHAINS: K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH G 617 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS B 29 REMARK 465 THR B 30 REMARK 465 LYS D 29 REMARK 465 THR D 30 REMARK 465 THR F 30 REMARK 465 THR H 30 REMARK 465 LYS J 29 REMARK 465 THR J 30 REMARK 465 LYS L 29 REMARK 465 THR L 30 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO B 28 O REMARK 470 LYS F 29 CG CD CE NZ REMARK 470 LYS H 29 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU D 13 OE1 GLU H 13 2.14 REMARK 500 OE1 GLU J 13 O HOH J 523 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASN I 21 C ASN I 21 OXT 0.295 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL F 2 39.50 -90.44 REMARK 500 VAL H 2 48.78 -68.88 REMARK 500 VAL J 2 56.55 -97.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 10 NE2 REMARK 620 2 HIS D 10 NE2 108.7 REMARK 620 3 HIS F 10 NE2 109.4 108.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN H 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS H 10 NE2 REMARK 620 2 HIS J 10 NE2 105.9 REMARK 620 3 HIS L 10 NE2 110.3 109.0 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2OLZ RELATED DB: PDB REMARK 900 STRUCTURE OF HUMAN INSULIN IN PRESENCE OF THIOCYANATE AT PH 7.0 REMARK 900 RELATED ID: 2OM0 RELATED DB: PDB REMARK 900 STRUCTURE OF HUMAN INSULIN IN PRESENCE OF UREA AT PH 6.5 REMARK 900 RELATED ID: 2OM1 RELATED DB: PDB REMARK 900 STRUCTURE OF HUMAN INSULIN IN PRESENCE OF THIOCYANATE AT PH 6.5 REMARK 900 RELATED ID: 2OMG RELATED DB: PDB REMARK 900 STRUCTURE OF HUMAN INSULIN COCRYSTALLIZED WITH PROTAMINE AND UREA REMARK 900 RELATED ID: 2OMH RELATED DB: PDB REMARK 900 STRUCTURE OF HUMAN INSULIN COCRYSTALLIZED WITH ARG-12 PEPTIDE IN REMARK 900 PRESENCE OF UREA REMARK 900 RELATED ID: 2OMI RELATED DB: PDB REMARK 900 STRUCTURE OF HUMAN INSULIN COCRYSTALLIZED WITH PROTAMINE DBREF 2OLY A 1 21 UNP P01308 INS_HUMAN 90 110 DBREF 2OLY C 1 21 UNP P01308 INS_HUMAN 90 110 DBREF 2OLY E 1 21 UNP P01308 INS_HUMAN 90 110 DBREF 2OLY G 1 21 UNP P01308 INS_HUMAN 90 110 DBREF 2OLY I 1 21 UNP P01308 INS_HUMAN 90 110 DBREF 2OLY K 1 21 UNP P01308 INS_HUMAN 90 110 DBREF 2OLY B 1 30 UNP P01308 INS_HUMAN 25 54 DBREF 2OLY D 1 30 UNP P01308 INS_HUMAN 25 54 DBREF 2OLY F 1 30 UNP P01308 INS_HUMAN 25 54 DBREF 2OLY H 1 30 UNP P01308 INS_HUMAN 25 54 DBREF 2OLY J 1 30 UNP P01308 INS_HUMAN 25 54 DBREF 2OLY L 1 30 UNP P01308 INS_HUMAN 25 54 SEQRES 1 A 21 GLY ILE VAL GLU GLN CYS CYS THR SER ILE CYS SER LEU SEQRES 2 A 21 TYR GLN LEU GLU ASN TYR CYS ASN SEQRES 1 B 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 B 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 B 30 THR PRO LYS THR SEQRES 1 C 21 GLY ILE VAL GLU GLN CYS CYS THR SER ILE CYS SER LEU SEQRES 2 C 21 TYR GLN LEU GLU ASN TYR CYS ASN SEQRES 1 D 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 D 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 D 30 THR PRO LYS THR SEQRES 1 E 21 GLY ILE VAL GLU GLN CYS CYS THR SER ILE CYS SER LEU SEQRES 2 E 21 TYR GLN LEU GLU ASN TYR CYS ASN SEQRES 1 F 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 F 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 F 30 THR PRO LYS THR SEQRES 1 G 21 GLY ILE VAL GLU GLN CYS CYS THR SER ILE CYS SER LEU SEQRES 2 G 21 TYR GLN LEU GLU ASN TYR CYS ASN SEQRES 1 H 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 H 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 H 30 THR PRO LYS THR SEQRES 1 I 21 GLY ILE VAL GLU GLN CYS CYS THR SER ILE CYS SER LEU SEQRES 2 I 21 TYR GLN LEU GLU ASN TYR CYS ASN SEQRES 1 J 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 J 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 J 30 THR PRO LYS THR SEQRES 1 K 21 GLY ILE VAL GLU GLN CYS CYS THR SER ILE CYS SER LEU SEQRES 2 K 21 TYR GLN LEU GLU ASN TYR CYS ASN SEQRES 1 L 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 L 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 L 30 THR PRO LYS THR HET RCO A 501 8 HET URE A 603 4 HET ZN B 302 1 HET CL B 402 1 HET RCO B 506 8 HET RCO C 504 8 HET URE C 607 4 HET RCO E 503 8 HET URE E 605 4 HET CL F 404 1 HET URE F 601 4 HET GOL F 701 6 HET RCO G 502 8 HET URE G 602 4 HET URE G 606 4 HET ZN H 301 1 HET CL H 401 1 HET CL H 405 1 HET RCO I 505 8 HET URE I 604 4 HET CL J 403 1 HET RCO J 507 8 HET RCO K 508 8 HETNAM RCO RESORCINOL HETNAM URE UREA HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETSYN RCO 1,3-BENZENEDIOL; 1,3-DIHYDROXYBENZENE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 13 RCO 8(C6 H6 O2) FORMUL 14 URE 7(C H4 N2 O) FORMUL 15 ZN 2(ZN 2+) FORMUL 16 CL 5(CL 1-) FORMUL 24 GOL C3 H8 O3 FORMUL 36 HOH *235(H2 O) HELIX 1 1 GLY A 1 CYS A 7 1 7 HELIX 2 2 SER A 12 GLU A 17 1 6 HELIX 3 3 ASN A 18 CYS A 20 5 3 HELIX 4 4 PHE B 1 GLY B 20 1 20 HELIX 5 5 GLU B 21 GLY B 23 5 3 HELIX 6 6 GLY C 1 CYS C 7 1 7 HELIX 7 7 SER C 12 ASN C 18 1 7 HELIX 8 8 PHE D 1 GLY D 20 1 20 HELIX 9 9 GLU D 21 GLY D 23 5 3 HELIX 10 10 GLY E 1 CYS E 7 1 7 HELIX 11 11 SER E 12 ASN E 18 1 7 HELIX 12 12 VAL F 2 GLY F 20 1 19 HELIX 13 13 GLU F 21 GLY F 23 5 3 HELIX 14 14 GLY G 1 SER G 9 1 9 HELIX 15 15 SER G 12 ASN G 18 1 7 HELIX 16 16 VAL H 2 GLY H 20 1 19 HELIX 17 17 GLU H 21 GLY H 23 5 3 HELIX 18 18 GLY I 1 CYS I 7 1 7 HELIX 19 19 SER I 12 GLU I 17 1 6 HELIX 20 20 ASN I 18 CYS I 20 5 3 HELIX 21 21 VAL J 2 GLY J 20 1 19 HELIX 22 22 GLU J 21 GLY J 23 5 3 HELIX 23 23 GLY K 1 CYS K 7 1 7 HELIX 24 24 SER K 12 ASN K 18 1 7 HELIX 25 25 PHE L 1 GLY L 20 1 20 HELIX 26 26 GLU L 21 GLY L 23 5 3 SHEET 1 A 2 PHE B 24 TYR B 26 0 SHEET 2 A 2 PHE J 24 TYR J 26 -1 O PHE J 24 N TYR B 26 SHEET 1 B 2 PHE D 24 TYR D 26 0 SHEET 2 B 2 PHE H 24 TYR H 26 -1 O PHE H 24 N TYR D 26 SHEET 1 C 2 PHE F 24 TYR F 26 0 SHEET 2 C 2 PHE L 24 TYR L 26 -1 O TYR L 26 N PHE F 24 SSBOND 1 CYS A 6 CYS A 11 1555 1555 2.03 SSBOND 2 CYS A 7 CYS B 7 1555 1555 2.03 SSBOND 3 CYS A 20 CYS B 19 1555 1555 2.04 SSBOND 4 CYS C 6 CYS C 11 1555 1555 2.03 SSBOND 5 CYS C 7 CYS D 7 1555 1555 2.04 SSBOND 6 CYS C 20 CYS D 19 1555 1555 2.05 SSBOND 7 CYS E 6 CYS E 11 1555 1555 2.04 SSBOND 8 CYS E 7 CYS F 7 1555 1555 2.06 SSBOND 9 CYS E 20 CYS F 19 1555 1555 2.04 SSBOND 10 CYS G 6 CYS G 11 1555 1555 2.02 SSBOND 11 CYS G 7 CYS H 7 1555 1555 2.03 SSBOND 12 CYS G 20 CYS H 19 1555 1555 1.94 SSBOND 13 CYS I 6 CYS I 11 1555 1555 2.03 SSBOND 14 CYS I 7 CYS J 7 1555 1555 2.03 SSBOND 15 CYS I 20 CYS J 19 1555 1555 2.01 SSBOND 16 CYS K 6 CYS K 11 1555 1555 2.02 SSBOND 17 CYS K 7 CYS L 7 1555 1555 2.04 SSBOND 18 CYS K 20 CYS L 19 1555 1555 2.05 LINK NE2 HIS B 10 ZN ZN B 302 1555 1555 2.02 LINK ZN ZN B 302 NE2 HIS D 10 1555 1555 2.02 LINK ZN ZN B 302 NE2 HIS F 10 1555 1555 1.98 LINK NE2 HIS H 10 ZN ZN H 301 1555 1555 2.07 LINK ZN ZN H 301 NE2 HIS J 10 1555 1555 2.02 LINK ZN ZN H 301 NE2 HIS L 10 1555 1555 1.98 CRYST1 100.240 60.150 62.920 90.00 116.21 90.00 C 1 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009976 0.000000 0.004911 0.00000 SCALE2 0.000000 0.016625 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017715 0.00000