HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 09-FEB-07 2OTR TITLE SOLUTION STRUCTURE OF CONSERVED HYPOTHETICAL PROTEIN HP0892 FROM TITLE 2 HELICOBACTER PYLORI COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN HP0892; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; SOURCE 3 ORGANISM_TAXID: 85962; SOURCE 4 STRAIN: 26695; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS ANTI-PARALLEL BETA SHEET, STRUCTURAL GENOMICS, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.D.HAN,S.J.PARK,S.B.JANG,B.J.LEE REVDAT 4 01-MAY-24 2OTR 1 REMARK SEQADV REVDAT 3 13-JUL-11 2OTR 1 VERSN REVDAT 2 24-FEB-09 2OTR 1 VERSN REVDAT 1 18-DEC-07 2OTR 0 JRNL AUTH K.D.HAN,S.J.PARK,S.B.JANG,B.J.LEE JRNL TITL SOLUTION STRUCTURE OF CONSERVED HYPOTHETICAL PROTEIN HP0892 JRNL TITL 2 FROM HELICOBACTER PYLORI. JRNL REF PROTEINS V. 70 599 2007 JRNL REFN ISSN 0887-3585 JRNL PMID 17957768 JRNL DOI 10.1002/PROT.21701 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE REMARK 3 -KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE, REMARK 3 SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2OTR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1000041574. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM HP0892 U-15N; 20MM PHOSPHATE REMARK 210 BUFFER NA; 90% H2O, 10% D2O; 1MM REMARK 210 HP0892 U-15N, 13C; 20MM REMARK 210 PHOSPHATE BUFFER NA; 90% H2O, 10% REMARK 210 D2O; 1MM HP0892 U-15N; 20MM REMARK 210 PHOSPHATE BUFFER NA; 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY; 2D 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE/NMRDRAW REMARK 210 2.3, NMRVIEW 5.0.4 REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 LEU A 91 REMARK 465 GLU A 92 REMARK 465 HIS A 93 REMARK 465 HIS A 94 REMARK 465 HIS A 95 REMARK 465 HIS A 96 REMARK 465 HIS A 97 REMARK 465 HIS A 98 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 3 -174.50 -68.53 REMARK 500 1 SER A 7 -169.52 -105.29 REMARK 500 1 GLU A 37 62.17 60.10 REMARK 500 1 PRO A 39 -80.92 -80.49 REMARK 500 1 LEU A 40 27.95 46.67 REMARK 500 1 ALA A 41 117.25 59.54 REMARK 500 1 LYS A 45 117.41 62.01 REMARK 500 1 LYS A 50 169.65 61.45 REMARK 500 1 ASP A 64 48.18 -145.57 REMARK 500 1 LEU A 67 99.11 -166.37 REMARK 500 1 GLU A 75 17.48 -144.00 REMARK 500 1 ASN A 76 71.91 47.99 REMARK 500 1 VAL A 81 -68.94 -131.85 REMARK 500 1 LEU A 83 134.75 -171.90 REMARK 500 2 THR A 3 -176.47 -60.13 REMARK 500 2 PRO A 39 -88.97 -85.82 REMARK 500 2 ALA A 41 128.73 63.31 REMARK 500 2 LYS A 45 149.64 62.52 REMARK 500 2 LEU A 49 -60.23 75.03 REMARK 500 2 LYS A 50 173.25 64.76 REMARK 500 2 LEU A 53 68.84 -119.90 REMARK 500 2 ASP A 64 51.74 -150.92 REMARK 500 2 GLU A 75 15.50 -142.95 REMARK 500 2 ASN A 76 74.32 46.12 REMARK 500 2 VAL A 81 -69.81 -131.86 REMARK 500 2 LEU A 83 144.34 -177.89 REMARK 500 2 LEU A 89 -72.30 -63.84 REMARK 500 3 THR A 3 -177.44 -57.73 REMARK 500 3 PRO A 39 -88.92 -73.09 REMARK 500 3 LEU A 40 -178.49 51.95 REMARK 500 3 LYS A 43 -41.00 -168.75 REMARK 500 3 LYS A 45 145.98 62.52 REMARK 500 3 PRO A 48 -176.11 -68.11 REMARK 500 3 HIS A 60 78.43 -102.44 REMARK 500 3 GLN A 70 111.45 -162.10 REMARK 500 3 GLU A 75 21.03 -148.26 REMARK 500 3 ASN A 76 71.92 48.27 REMARK 500 3 VAL A 81 -66.62 -137.92 REMARK 500 3 LEU A 83 91.05 -176.38 REMARK 500 4 THR A 3 -177.22 -59.45 REMARK 500 4 PHE A 22 -40.11 -175.67 REMARK 500 4 ASP A 23 173.90 59.41 REMARK 500 4 PRO A 39 -92.93 -79.95 REMARK 500 4 LEU A 40 -178.24 55.86 REMARK 500 4 LYS A 43 32.00 -96.20 REMARK 500 4 TYR A 44 -79.66 -139.95 REMARK 500 4 LYS A 45 37.67 -177.98 REMARK 500 4 PRO A 48 -176.04 -52.33 REMARK 500 4 LEU A 49 -75.12 -109.02 REMARK 500 4 LYS A 50 -172.95 174.01 REMARK 500 REMARK 500 THIS ENTRY HAS 262 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2OTR A 1 90 UNP O25552 O25552_HELPY 1 90 SEQADV 2OTR LEU A 91 UNP O25552 EXPRESSION TAG SEQADV 2OTR GLU A 92 UNP O25552 EXPRESSION TAG SEQADV 2OTR HIS A 93 UNP O25552 EXPRESSION TAG SEQADV 2OTR HIS A 94 UNP O25552 EXPRESSION TAG SEQADV 2OTR HIS A 95 UNP O25552 EXPRESSION TAG SEQADV 2OTR HIS A 96 UNP O25552 EXPRESSION TAG SEQADV 2OTR HIS A 97 UNP O25552 EXPRESSION TAG SEQADV 2OTR HIS A 98 UNP O25552 EXPRESSION TAG SEQRES 1 A 98 MET LEU THR ILE GLU THR SER LYS LYS PHE ASP LYS ASP SEQRES 2 A 98 LEU LYS ILE LEU VAL LYS ASN GLY PHE ASP LEU LYS LEU SEQRES 3 A 98 LEU TYR LYS VAL VAL GLY ASN LEU ALA THR GLU GLN PRO SEQRES 4 A 98 LEU ALA PRO LYS TYR LYS ASP HIS PRO LEU LYS GLY GLY SEQRES 5 A 98 LEU LYS ASP PHE ARG GLU CYS HIS LEU LYS PRO ASP LEU SEQRES 6 A 98 LEU LEU VAL TYR GLN ILE LYS LYS GLN GLU ASN THR LEU SEQRES 7 A 98 PHE LEU VAL ARG LEU GLY SER HIS SER GLU LEU PHE LEU SEQRES 8 A 98 GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 SER A 7 PHE A 22 1 16 HELIX 2 2 LEU A 24 GLU A 37 1 14 HELIX 3 3 SER A 85 PHE A 90 1 6 SHEET 1 A 5 THR A 3 GLU A 5 0 SHEET 2 A 5 THR A 77 GLY A 84 1 O LEU A 78 N GLU A 5 SHEET 3 A 5 LEU A 65 LYS A 72 -1 N GLN A 70 O PHE A 79 SHEET 4 A 5 ARG A 57 LYS A 62 -1 N ARG A 57 O TYR A 69 SHEET 5 A 5 HIS A 47 PRO A 48 -1 N HIS A 47 O GLU A 58 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1