data_2OUO # _entry.id 2OUO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2OUO pdb_00002ouo 10.2210/pdb2ouo/pdb RCSB RCSB041607 ? ? WWPDB D_1000041607 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2OSS _pdbx_database_related.details 'Crystal structure of the Bromo domain 1 in human Bromodomain Containing Protein 4 (BRD4)' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 2OUO _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-02-12 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Filippakopoulos, P.' 1 'Keates, T.' 2 'Savitsky, P.' 3 'Burgess, N.' 4 'Ugochukwu, E.' 5 'von Delft, F.' 6 'Arrowsmith, C.H.' 7 'Edwards, A.' 8 'Weigelt, J.' 9 'Sundstrom, M.' 10 'Knapp, S.' 11 'Structural Genomics Consortium (SGC)' 12 # _citation.id primary _citation.title 'Histone recognition and large-scale structural analysis of the human bromodomain family.' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 149 _citation.page_first 214 _citation.page_last 231 _citation.year 2012 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22464331 _citation.pdbx_database_id_DOI 10.1016/j.cell.2012.02.013 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Filippakopoulos, P.' 1 ? primary 'Picaud, S.' 2 ? primary 'Mangos, M.' 3 ? primary 'Keates, T.' 4 ? primary 'Lambert, J.P.' 5 ? primary 'Barsyte-Lovejoy, D.' 6 ? primary 'Felletar, I.' 7 ? primary 'Volkmer, R.' 8 ? primary 'Muller, S.' 9 ? primary 'Pawson, T.' 10 ? primary 'Gingras, A.C.' 11 ? primary 'Arrowsmith, C.H.' 12 ? primary 'Knapp, S.' 13 ? # _cell.length_a 58.032 _cell.length_b 73.698 _cell.length_c 33.467 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 2OUO _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.entry_id 2OUO _symmetry.Int_Tables_number 18 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain-containing protein 4' 15060.332 1 ? ? 'Bromo domain 2' ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 3 ? ? ? ? 3 water nat water 18.015 132 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'HUNK1 protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE ; _entity_poly.pdbx_seq_one_letter_code_can ;SMKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 LYS n 1 4 ASP n 1 5 VAL n 1 6 PRO n 1 7 ASP n 1 8 SER n 1 9 GLN n 1 10 GLN n 1 11 HIS n 1 12 PRO n 1 13 ALA n 1 14 PRO n 1 15 GLU n 1 16 LYS n 1 17 SER n 1 18 SER n 1 19 LYS n 1 20 VAL n 1 21 SER n 1 22 GLU n 1 23 GLN n 1 24 LEU n 1 25 LYS n 1 26 CYS n 1 27 CYS n 1 28 SER n 1 29 GLY n 1 30 ILE n 1 31 LEU n 1 32 LYS n 1 33 GLU n 1 34 MET n 1 35 PHE n 1 36 ALA n 1 37 LYS n 1 38 LYS n 1 39 HIS n 1 40 ALA n 1 41 ALA n 1 42 TYR n 1 43 ALA n 1 44 TRP n 1 45 PRO n 1 46 PHE n 1 47 TYR n 1 48 LYS n 1 49 PRO n 1 50 VAL n 1 51 ASP n 1 52 VAL n 1 53 GLU n 1 54 ALA n 1 55 LEU n 1 56 GLY n 1 57 LEU n 1 58 HIS n 1 59 ASP n 1 60 TYR n 1 61 CYS n 1 62 ASP n 1 63 ILE n 1 64 ILE n 1 65 LYS n 1 66 HIS n 1 67 PRO n 1 68 MET n 1 69 ASP n 1 70 MET n 1 71 SER n 1 72 THR n 1 73 ILE n 1 74 LYS n 1 75 SER n 1 76 LYS n 1 77 LEU n 1 78 GLU n 1 79 ALA n 1 80 ARG n 1 81 GLU n 1 82 TYR n 1 83 ARG n 1 84 ASP n 1 85 ALA n 1 86 GLN n 1 87 GLU n 1 88 PHE n 1 89 GLY n 1 90 ALA n 1 91 ASP n 1 92 VAL n 1 93 ARG n 1 94 LEU n 1 95 MET n 1 96 PHE n 1 97 SER n 1 98 ASN n 1 99 CYS n 1 100 TYR n 1 101 LYS n 1 102 TYR n 1 103 ASN n 1 104 PRO n 1 105 PRO n 1 106 ASP n 1 107 HIS n 1 108 GLU n 1 109 VAL n 1 110 VAL n 1 111 ALA n 1 112 MET n 1 113 ALA n 1 114 ARG n 1 115 LYS n 1 116 LEU n 1 117 GLN n 1 118 ASP n 1 119 VAL n 1 120 PHE n 1 121 GLU n 1 122 MET n 1 123 ARG n 1 124 PHE n 1 125 ALA n 1 126 LYS n 1 127 MET n 1 128 PRO n 1 129 ASP n 1 130 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'BRD4, HUNK1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Rosetta-R3 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNIC28-Bsa4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRD4_HUMAN _struct_ref.pdbx_db_accession O60885 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREY RDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE ; _struct_ref.pdbx_align_begin 333 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2OUO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 130 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O60885 _struct_ref_seq.db_align_beg 333 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 460 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 333 _struct_ref_seq.pdbx_auth_seq_align_end 460 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2OUO SER A 1 ? UNP O60885 ? ? 'cloning artifact' 331 1 1 2OUO MET A 2 ? UNP O60885 ? ? 'cloning artifact' 332 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2OUO _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.37 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 48.20 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.1M MIB, 30% PEG 1000, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS' _diffrn_detector.pdbx_collection_date 2007-02-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54000 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 2OUO _reflns.d_resolution_high 1.740 _reflns.d_resolution_low 73.72 _reflns.number_obs 15125 _reflns.pdbx_Rmerge_I_obs 0.065 _reflns.pdbx_netI_over_sigmaI 11.400 _reflns.pdbx_chi_squared 1.031 _reflns.pdbx_redundancy 3.700 _reflns.percent_possible_obs 99.300 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 0 _reflns.number_all 15125 _reflns.pdbx_Rsym_value 0.065 _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.74 _reflns_shell.d_res_low 1.78 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.618 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.941 _reflns_shell.pdbx_redundancy 3.30 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1156 _reflns_shell.percent_possible_all 98.60 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2OUO _refine.ls_d_res_high 1.890 _refine.ls_d_res_low 50.0 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 98.160 _refine.ls_number_reflns_obs 12030 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.184 _refine.ls_R_factor_R_work 0.182 _refine.ls_R_factor_R_free 0.216 _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 722 _refine.B_iso_mean 27.303 _refine.aniso_B[1][1] -0.260 _refine.aniso_B[2][2] 0.180 _refine.aniso_B[3][3] 0.080 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.956 _refine.pdbx_overall_ESU_R 0.103 _refine.pdbx_overall_ESU_R_Free 0.103 _refine.overall_SU_ML 0.066 _refine.overall_SU_B 3.961 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 12030 _refine.ls_R_factor_all 0.184 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 1X0J' _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 882 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 132 _refine_hist.number_atoms_total 1026 _refine_hist.d_res_high 1.890 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 934 0.018 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 649 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1260 1.531 1.962 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 1566 1.048 3.003 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 118 5.308 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 42 29.577 24.048 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 162 11.279 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 4 26.097 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 132 0.090 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1032 0.008 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 191 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 213 0.220 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 622 0.183 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 461 0.180 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 431 0.089 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 88 0.153 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 6 0.215 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 27 0.292 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 12 0.139 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 644 1.053 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 222 0.316 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 917 1.455 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 402 2.144 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 339 2.936 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.89 _refine_ls_shell.d_res_low 1.96 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 87.990 _refine_ls_shell.number_reflns_R_work 933 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.35 _refine_ls_shell.R_factor_R_free 0.44 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 41 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 974 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2OUO _struct.title 'Crystal Structure of the Bromo domain 2 in human Bromodomain Containing Protein 4 (BRD4)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2OUO _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'BRD4, bromodomain containing protein 4, Structural Genomics Consortium, SGC, SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 19 ? PHE A 35 ? LYS A 349 PHE A 365 1 ? 17 HELX_P HELX_P2 2 ALA A 36 ? LYS A 38 ? ALA A 366 LYS A 368 5 ? 3 HELX_P HELX_P3 3 HIS A 39 ? TRP A 44 ? HIS A 369 TRP A 374 1 ? 6 HELX_P HELX_P4 4 PRO A 45 ? TYR A 47 ? PRO A 375 TYR A 377 5 ? 3 HELX_P HELX_P5 5 ASP A 59 ? ILE A 64 ? ASP A 389 ILE A 394 1 ? 6 HELX_P HELX_P6 6 ASP A 69 ? ALA A 79 ? ASP A 399 ALA A 409 1 ? 11 HELX_P HELX_P7 7 ASP A 84 ? ASN A 103 ? ASP A 414 ASN A 433 1 ? 20 HELX_P HELX_P8 8 HIS A 107 ? LYS A 126 ? HIS A 437 LYS A 456 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 201 ? 2 'BINDING SITE FOR RESIDUE EDO A 201' AC2 Software A EDO 202 ? 7 'BINDING SITE FOR RESIDUE EDO A 202' AC3 Software A EDO 203 ? 1 'BINDING SITE FOR RESIDUE EDO A 203' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 HOH E . ? HOH A 11 . ? 1_555 ? 2 AC1 2 ASN A 103 ? ASN A 433 . ? 1_555 ? 3 AC2 7 HOH E . ? HOH A 84 . ? 2_655 ? 4 AC2 7 HOH E . ? HOH A 158 . ? 2_655 ? 5 AC2 7 LEU A 94 ? LEU A 424 . ? 1_555 ? 6 AC2 7 SER A 97 ? SER A 427 . ? 1_555 ? 7 AC2 7 ASN A 98 ? ASN A 428 . ? 1_555 ? 8 AC2 7 LYS A 101 ? LYS A 431 . ? 1_555 ? 9 AC2 7 ALA A 125 ? ALA A 455 . ? 2_655 ? 10 AC3 1 GLU A 108 ? GLU A 438 . ? 1_555 ? # _atom_sites.entry_id 2OUO _atom_sites.fract_transf_matrix[1][1] 0.017232 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013569 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.029880 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 331 ? ? ? A . n A 1 2 MET 2 332 ? ? ? A . n A 1 3 LYS 3 333 ? ? ? A . n A 1 4 ASP 4 334 ? ? ? A . n A 1 5 VAL 5 335 ? ? ? A . n A 1 6 PRO 6 336 ? ? ? A . n A 1 7 ASP 7 337 ? ? ? A . n A 1 8 SER 8 338 ? ? ? A . n A 1 9 GLN 9 339 ? ? ? A . n A 1 10 GLN 10 340 ? ? ? A . n A 1 11 HIS 11 341 ? ? ? A . n A 1 12 PRO 12 342 ? ? ? A . n A 1 13 ALA 13 343 ? ? ? A . n A 1 14 PRO 14 344 ? ? ? A . n A 1 15 GLU 15 345 ? ? ? A . n A 1 16 LYS 16 346 ? ? ? A . n A 1 17 SER 17 347 ? ? ? A . n A 1 18 SER 18 348 ? ? ? A . n A 1 19 LYS 19 349 349 LYS LYS A . n A 1 20 VAL 20 350 350 VAL VAL A . n A 1 21 SER 21 351 351 SER SER A . n A 1 22 GLU 22 352 352 GLU GLU A . n A 1 23 GLN 23 353 353 GLN GLN A . n A 1 24 LEU 24 354 354 LEU LEU A . n A 1 25 LYS 25 355 355 LYS LYS A . n A 1 26 CYS 26 356 356 CYS CYS A . n A 1 27 CYS 27 357 357 CYS CYS A . n A 1 28 SER 28 358 358 SER SER A . n A 1 29 GLY 29 359 359 GLY GLY A . n A 1 30 ILE 30 360 360 ILE ILE A . n A 1 31 LEU 31 361 361 LEU LEU A . n A 1 32 LYS 32 362 362 LYS LYS A . n A 1 33 GLU 33 363 363 GLU GLU A . n A 1 34 MET 34 364 364 MET MET A . n A 1 35 PHE 35 365 365 PHE PHE A . n A 1 36 ALA 36 366 366 ALA ALA A . n A 1 37 LYS 37 367 367 LYS LYS A . n A 1 38 LYS 38 368 368 LYS LYS A . n A 1 39 HIS 39 369 369 HIS HIS A . n A 1 40 ALA 40 370 370 ALA ALA A . n A 1 41 ALA 41 371 371 ALA ALA A . n A 1 42 TYR 42 372 372 TYR TYR A . n A 1 43 ALA 43 373 373 ALA ALA A . n A 1 44 TRP 44 374 374 TRP TRP A . n A 1 45 PRO 45 375 375 PRO PRO A . n A 1 46 PHE 46 376 376 PHE PHE A . n A 1 47 TYR 47 377 377 TYR TYR A . n A 1 48 LYS 48 378 378 LYS LYS A . n A 1 49 PRO 49 379 379 PRO PRO A . n A 1 50 VAL 50 380 380 VAL VAL A . n A 1 51 ASP 51 381 381 ASP ASP A . n A 1 52 VAL 52 382 382 VAL VAL A . n A 1 53 GLU 53 383 383 GLU GLU A . n A 1 54 ALA 54 384 384 ALA ALA A . n A 1 55 LEU 55 385 385 LEU LEU A . n A 1 56 GLY 56 386 386 GLY GLY A . n A 1 57 LEU 57 387 387 LEU LEU A . n A 1 58 HIS 58 388 388 HIS HIS A . n A 1 59 ASP 59 389 389 ASP ASP A . n A 1 60 TYR 60 390 390 TYR TYR A . n A 1 61 CYS 61 391 391 CYS CYS A . n A 1 62 ASP 62 392 392 ASP ASP A . n A 1 63 ILE 63 393 393 ILE ILE A . n A 1 64 ILE 64 394 394 ILE ILE A . n A 1 65 LYS 65 395 395 LYS LYS A . n A 1 66 HIS 66 396 396 HIS HIS A . n A 1 67 PRO 67 397 397 PRO PRO A . n A 1 68 MET 68 398 398 MET MET A . n A 1 69 ASP 69 399 399 ASP ASP A . n A 1 70 MET 70 400 400 MET MET A . n A 1 71 SER 71 401 401 SER SER A . n A 1 72 THR 72 402 402 THR THR A . n A 1 73 ILE 73 403 403 ILE ILE A . n A 1 74 LYS 74 404 404 LYS LYS A . n A 1 75 SER 75 405 405 SER SER A . n A 1 76 LYS 76 406 406 LYS LYS A . n A 1 77 LEU 77 407 407 LEU LEU A . n A 1 78 GLU 78 408 408 GLU GLU A . n A 1 79 ALA 79 409 409 ALA ALA A . n A 1 80 ARG 80 410 410 ARG ARG A . n A 1 81 GLU 81 411 411 GLU GLU A . n A 1 82 TYR 82 412 412 TYR TYR A . n A 1 83 ARG 83 413 413 ARG ARG A . n A 1 84 ASP 84 414 414 ASP ASP A . n A 1 85 ALA 85 415 415 ALA ALA A . n A 1 86 GLN 86 416 416 GLN GLN A . n A 1 87 GLU 87 417 417 GLU GLU A . n A 1 88 PHE 88 418 418 PHE PHE A . n A 1 89 GLY 89 419 419 GLY GLY A . n A 1 90 ALA 90 420 420 ALA ALA A . n A 1 91 ASP 91 421 421 ASP ASP A . n A 1 92 VAL 92 422 422 VAL VAL A . n A 1 93 ARG 93 423 423 ARG ARG A . n A 1 94 LEU 94 424 424 LEU LEU A . n A 1 95 MET 95 425 425 MET MET A . n A 1 96 PHE 96 426 426 PHE PHE A . n A 1 97 SER 97 427 427 SER SER A . n A 1 98 ASN 98 428 428 ASN ASN A . n A 1 99 CYS 99 429 429 CYS CYS A . n A 1 100 TYR 100 430 430 TYR TYR A . n A 1 101 LYS 101 431 431 LYS LYS A . n A 1 102 TYR 102 432 432 TYR TYR A . n A 1 103 ASN 103 433 433 ASN ASN A . n A 1 104 PRO 104 434 434 PRO PRO A . n A 1 105 PRO 105 435 435 PRO PRO A . n A 1 106 ASP 106 436 436 ASP ASP A . n A 1 107 HIS 107 437 437 HIS HIS A . n A 1 108 GLU 108 438 438 GLU GLU A . n A 1 109 VAL 109 439 439 VAL VAL A . n A 1 110 VAL 110 440 440 VAL VAL A . n A 1 111 ALA 111 441 441 ALA ALA A . n A 1 112 MET 112 442 442 MET MET A . n A 1 113 ALA 113 443 443 ALA ALA A . n A 1 114 ARG 114 444 444 ARG ARG A . n A 1 115 LYS 115 445 445 LYS LYS A . n A 1 116 LEU 116 446 446 LEU LEU A . n A 1 117 GLN 117 447 447 GLN GLN A . n A 1 118 ASP 118 448 448 ASP ASP A . n A 1 119 VAL 119 449 449 VAL VAL A . n A 1 120 PHE 120 450 450 PHE PHE A . n A 1 121 GLU 121 451 451 GLU GLU A . n A 1 122 MET 122 452 452 MET MET A . n A 1 123 ARG 123 453 453 ARG ARG A . n A 1 124 PHE 124 454 454 PHE PHE A . n A 1 125 ALA 125 455 455 ALA ALA A . n A 1 126 LYS 126 456 456 LYS LYS A . n A 1 127 MET 127 457 457 MET MET A . n A 1 128 PRO 128 458 458 PRO PRO A . n A 1 129 ASP 129 459 459 ASP ASP A . n A 1 130 GLU 130 460 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 201 201 EDO EDO A . C 2 EDO 1 202 202 EDO EDO A . D 2 EDO 1 203 203 EDO EDO A . E 3 HOH 1 1 1 HOH HOH A . E 3 HOH 2 2 2 HOH HOH A . E 3 HOH 3 3 3 HOH HOH A . E 3 HOH 4 5 5 HOH HOH A . E 3 HOH 5 6 6 HOH HOH A . E 3 HOH 6 8 8 HOH HOH A . E 3 HOH 7 9 9 HOH HOH A . E 3 HOH 8 10 10 HOH HOH A . E 3 HOH 9 11 11 HOH HOH A . E 3 HOH 10 12 12 HOH HOH A . E 3 HOH 11 14 14 HOH HOH A . E 3 HOH 12 15 15 HOH HOH A . E 3 HOH 13 17 17 HOH HOH A . E 3 HOH 14 18 18 HOH HOH A . E 3 HOH 15 19 19 HOH HOH A . E 3 HOH 16 21 21 HOH HOH A . E 3 HOH 17 23 23 HOH HOH A . E 3 HOH 18 24 24 HOH HOH A . E 3 HOH 19 25 25 HOH HOH A . E 3 HOH 20 26 26 HOH HOH A . E 3 HOH 21 27 27 HOH HOH A . E 3 HOH 22 28 28 HOH HOH A . E 3 HOH 23 29 29 HOH HOH A . E 3 HOH 24 30 30 HOH HOH A . E 3 HOH 25 31 31 HOH HOH A . E 3 HOH 26 34 34 HOH HOH A . E 3 HOH 27 35 35 HOH HOH A . E 3 HOH 28 36 36 HOH HOH A . E 3 HOH 29 37 37 HOH HOH A . E 3 HOH 30 39 39 HOH HOH A . E 3 HOH 31 40 40 HOH HOH A . E 3 HOH 32 41 41 HOH HOH A . E 3 HOH 33 42 42 HOH HOH A . E 3 HOH 34 43 43 HOH HOH A . E 3 HOH 35 46 46 HOH HOH A . E 3 HOH 36 47 47 HOH HOH A . E 3 HOH 37 48 48 HOH HOH A . E 3 HOH 38 50 50 HOH HOH A . E 3 HOH 39 51 51 HOH HOH A . E 3 HOH 40 52 52 HOH HOH A . E 3 HOH 41 54 54 HOH HOH A . E 3 HOH 42 56 56 HOH HOH A . E 3 HOH 43 57 57 HOH HOH A . E 3 HOH 44 59 59 HOH HOH A . E 3 HOH 45 60 60 HOH HOH A . E 3 HOH 46 62 62 HOH HOH A . E 3 HOH 47 63 63 HOH HOH A . E 3 HOH 48 65 65 HOH HOH A . E 3 HOH 49 67 67 HOH HOH A . E 3 HOH 50 68 68 HOH HOH A . E 3 HOH 51 69 69 HOH HOH A . E 3 HOH 52 70 70 HOH HOH A . E 3 HOH 53 71 71 HOH HOH A . E 3 HOH 54 72 72 HOH HOH A . E 3 HOH 55 74 74 HOH HOH A . E 3 HOH 56 75 75 HOH HOH A . E 3 HOH 57 76 76 HOH HOH A . E 3 HOH 58 78 78 HOH HOH A . E 3 HOH 59 82 82 HOH HOH A . E 3 HOH 60 83 83 HOH HOH A . E 3 HOH 61 84 84 HOH HOH A . E 3 HOH 62 85 85 HOH HOH A . E 3 HOH 63 91 91 HOH HOH A . E 3 HOH 64 92 92 HOH HOH A . E 3 HOH 65 93 93 HOH HOH A . E 3 HOH 66 94 94 HOH HOH A . E 3 HOH 67 96 96 HOH HOH A . E 3 HOH 68 97 97 HOH HOH A . E 3 HOH 69 98 98 HOH HOH A . E 3 HOH 70 99 99 HOH HOH A . E 3 HOH 71 100 100 HOH HOH A . E 3 HOH 72 101 101 HOH HOH A . E 3 HOH 73 104 104 HOH HOH A . E 3 HOH 74 106 106 HOH HOH A . E 3 HOH 75 107 107 HOH HOH A . E 3 HOH 76 108 108 HOH HOH A . E 3 HOH 77 109 109 HOH HOH A . E 3 HOH 78 110 110 HOH HOH A . E 3 HOH 79 112 112 HOH HOH A . E 3 HOH 80 113 113 HOH HOH A . E 3 HOH 81 114 114 HOH HOH A . E 3 HOH 82 115 115 HOH HOH A . E 3 HOH 83 121 121 HOH HOH A . E 3 HOH 84 122 122 HOH HOH A . E 3 HOH 85 123 123 HOH HOH A . E 3 HOH 86 124 124 HOH HOH A . E 3 HOH 87 125 125 HOH HOH A . E 3 HOH 88 126 126 HOH HOH A . E 3 HOH 89 127 127 HOH HOH A . E 3 HOH 90 129 129 HOH HOH A . E 3 HOH 91 132 132 HOH HOH A . E 3 HOH 92 134 134 HOH HOH A . E 3 HOH 93 135 135 HOH HOH A . E 3 HOH 94 136 136 HOH HOH A . E 3 HOH 95 139 139 HOH HOH A . E 3 HOH 96 140 140 HOH HOH A . E 3 HOH 97 144 144 HOH HOH A . E 3 HOH 98 145 145 HOH HOH A . E 3 HOH 99 146 146 HOH HOH A . E 3 HOH 100 147 147 HOH HOH A . E 3 HOH 101 148 148 HOH HOH A . E 3 HOH 102 149 149 HOH HOH A . E 3 HOH 103 150 150 HOH HOH A . E 3 HOH 104 151 151 HOH HOH A . E 3 HOH 105 152 152 HOH HOH A . E 3 HOH 106 153 153 HOH HOH A . E 3 HOH 107 154 154 HOH HOH A . E 3 HOH 108 155 155 HOH HOH A . E 3 HOH 109 156 156 HOH HOH A . E 3 HOH 110 157 157 HOH HOH A . E 3 HOH 111 158 158 HOH HOH A . E 3 HOH 112 159 159 HOH HOH A . E 3 HOH 113 160 160 HOH HOH A . E 3 HOH 114 161 161 HOH HOH A . E 3 HOH 115 162 162 HOH HOH A . E 3 HOH 116 163 163 HOH HOH A . E 3 HOH 117 164 164 HOH HOH A . E 3 HOH 118 165 165 HOH HOH A . E 3 HOH 119 166 166 HOH HOH A . E 3 HOH 120 167 167 HOH HOH A . E 3 HOH 121 168 168 HOH HOH A . E 3 HOH 122 169 169 HOH HOH A . E 3 HOH 123 170 170 HOH HOH A . E 3 HOH 124 171 171 HOH HOH A . E 3 HOH 125 172 172 HOH HOH A . E 3 HOH 126 173 173 HOH HOH A . E 3 HOH 127 174 174 HOH HOH A . E 3 HOH 128 176 176 HOH HOH A . E 3 HOH 129 177 177 HOH HOH A . E 3 HOH 130 179 179 HOH HOH A . E 3 HOH 131 180 180 HOH HOH A . E 3 HOH 132 181 181 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 78 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-02-27 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-04-11 5 'Structure model' 1 4 2017-10-18 6 'Structure model' 1 5 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 5 'Structure model' 'Refinement description' 6 6 'Structure model' 'Data collection' 7 6 'Structure model' 'Database references' 8 6 'Structure model' 'Derived calculations' 9 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' software 2 6 'Structure model' chem_comp_atom 3 6 'Structure model' chem_comp_bond 4 6 'Structure model' database_2 5 6 'Structure model' pdbx_initial_refinement_model 6 6 'Structure model' struct_ref_seq_dif 7 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_software.classification' 2 5 'Structure model' '_software.contact_author' 3 5 'Structure model' '_software.contact_author_email' 4 5 'Structure model' '_software.date' 5 5 'Structure model' '_software.language' 6 5 'Structure model' '_software.location' 7 5 'Structure model' '_software.name' 8 5 'Structure model' '_software.type' 9 5 'Structure model' '_software.version' 10 6 'Structure model' '_database_2.pdbx_DOI' 11 6 'Structure model' '_database_2.pdbx_database_accession' 12 6 'Structure model' '_struct_ref_seq_dif.details' 13 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 14 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 15 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.890 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 12030 _diffrn_reflns.pdbx_Rmerge_I_obs 0.065 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.03 _diffrn_reflns.av_sigmaI_over_netI 11.40 _diffrn_reflns.pdbx_redundancy 3.70 _diffrn_reflns.pdbx_percent_possible_obs 99.30 _diffrn_reflns.number 44952 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 4.07 50.00 ? ? 0.044 ? 1.029 3.60 97.70 1 3.23 4.07 ? ? 0.051 ? 1.015 3.90 98.80 1 2.82 3.23 ? ? 0.070 ? 1.034 3.80 100.00 1 2.57 2.82 ? ? 0.085 ? 1.012 3.80 99.70 1 2.38 2.57 ? ? 0.115 ? 1.040 3.80 99.80 1 2.24 2.38 ? ? 0.155 ? 1.070 3.80 99.90 1 2.13 2.24 ? ? 0.203 ? 1.070 3.80 99.80 1 2.04 2.13 ? ? 0.294 ? 1.070 3.80 99.30 1 1.96 2.04 ? ? 0.457 ? 1.014 3.70 99.50 1 1.89 1.96 ? ? 0.618 ? 0.941 3.30 98.60 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 42.4360 5.7350 46.7140 -0.0953 -0.2450 -0.0727 -0.0293 0.0251 0.0154 3.1157 5.5863 5.5508 -0.6503 0.8021 -2.0045 0.0135 -0.0759 0.0624 0.0879 0.3572 -0.2644 -0.0842 -0.2637 0.2395 'X-RAY DIFFRACTION' 2 ? refined 45.3480 -16.7870 47.0800 0.0364 -0.0902 0.0419 0.0645 0.0788 0.0216 1.1229 11.1971 4.7235 -3.2607 0.9814 -5.4348 0.0564 -0.2988 0.2424 0.2216 -0.1526 -0.6827 -0.6036 0.5785 0.0646 'X-RAY DIFFRACTION' 3 ? refined 42.8260 -5.4150 38.8860 0.0346 -0.1873 -0.1144 0.0467 0.0882 0.0111 3.5894 3.9052 2.2760 0.8154 -0.1679 -2.5880 -0.0301 0.0120 0.0181 0.4459 -0.1216 -0.5797 -0.6097 0.2987 0.2958 'X-RAY DIFFRACTION' 4 ? refined 35.7300 -1.5070 39.5760 -0.0039 -0.2734 -0.1443 0.0194 0.0327 -0.0040 3.0351 5.2957 4.2655 1.5319 -0.9427 -3.3300 0.0031 0.1081 -0.1112 0.2806 0.0290 0.0523 -0.3187 0.0461 0.0162 'X-RAY DIFFRACTION' 5 ? refined 34.6130 -3.4250 52.9390 -0.0559 -0.2252 -0.1635 -0.0126 0.0198 0.0085 3.0753 9.3245 2.1064 -0.5190 0.2320 -0.5934 0.0483 -0.0682 0.0199 -0.3308 -0.1110 0.0689 0.5197 0.0774 0.0237 'X-RAY DIFFRACTION' 6 ? refined 31.6870 12.7600 42.3950 0.1242 -0.1792 0.2144 0.0585 0.0519 0.1178 32.1407 9.8246 22.5255 -6.2182 -11.2731 2.3556 1.1723 -0.7053 -0.4669 0.9732 3.1968 0.0217 -1.0616 -1.4454 -0.6880 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 19 A 47 ALL A 349 A 377 'X-RAY DIFFRACTION' ? 2 2 A 48 A 60 ALL A 378 A 390 'X-RAY DIFFRACTION' ? 3 3 A 61 A 80 ALL A 391 A 410 'X-RAY DIFFRACTION' ? 4 4 A 81 A 101 ALL A 411 A 431 'X-RAY DIFFRACTION' ? 5 5 A 102 A 123 ALL A 432 A 453 'X-RAY DIFFRACTION' ? 6 6 A 124 A 129 ALL A 454 A 459 'X-RAY DIFFRACTION' ? # _pdbx_phasing_MR.entry_id 2OUO _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 3.500 _pdbx_phasing_MR.d_res_low_rotation 24.770 _pdbx_phasing_MR.d_res_high_translation 3.500 _pdbx_phasing_MR.d_res_low_translation 24.770 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 PHASER . ? other 'R. J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 CrystalClear '(MSC/RIGAKU)' ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 349 ? CG ? A LYS 19 CG 2 1 Y 1 A LYS 349 ? CD ? A LYS 19 CD 3 1 Y 1 A LYS 349 ? CE ? A LYS 19 CE 4 1 Y 1 A LYS 349 ? NZ ? A LYS 19 NZ 5 1 Y 1 A LYS 362 ? CE ? A LYS 32 CE 6 1 Y 1 A LYS 362 ? NZ ? A LYS 32 NZ 7 1 Y 1 A LYS 367 ? CD ? A LYS 37 CD 8 1 Y 1 A LYS 367 ? CE ? A LYS 37 CE 9 1 Y 1 A LYS 367 ? NZ ? A LYS 37 NZ 10 1 Y 1 A LYS 378 ? CE ? A LYS 48 CE 11 1 Y 1 A LYS 378 ? NZ ? A LYS 48 NZ 12 1 Y 1 A GLU 383 ? OE1 ? A GLU 53 OE1 13 1 Y 1 A GLU 383 ? OE2 ? A GLU 53 OE2 14 1 Y 1 A LYS 395 ? CG ? A LYS 65 CG 15 1 Y 1 A LYS 395 ? CD ? A LYS 65 CD 16 1 Y 1 A LYS 395 ? CE ? A LYS 65 CE 17 1 Y 1 A LYS 395 ? NZ ? A LYS 65 NZ 18 1 Y 1 A LYS 404 ? NZ ? A LYS 74 NZ 19 1 Y 1 A ARG 410 ? CD ? A ARG 80 CD 20 1 Y 1 A ARG 410 ? NE ? A ARG 80 NE 21 1 Y 1 A ARG 410 ? CZ ? A ARG 80 CZ 22 1 Y 1 A ARG 410 ? NH1 ? A ARG 80 NH1 23 1 Y 1 A ARG 410 ? NH2 ? A ARG 80 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 331 ? A SER 1 2 1 Y 1 A MET 332 ? A MET 2 3 1 Y 1 A LYS 333 ? A LYS 3 4 1 Y 1 A ASP 334 ? A ASP 4 5 1 Y 1 A VAL 335 ? A VAL 5 6 1 Y 1 A PRO 336 ? A PRO 6 7 1 Y 1 A ASP 337 ? A ASP 7 8 1 Y 1 A SER 338 ? A SER 8 9 1 Y 1 A GLN 339 ? A GLN 9 10 1 Y 1 A GLN 340 ? A GLN 10 11 1 Y 1 A HIS 341 ? A HIS 11 12 1 Y 1 A PRO 342 ? A PRO 12 13 1 Y 1 A ALA 343 ? A ALA 13 14 1 Y 1 A PRO 344 ? A PRO 14 15 1 Y 1 A GLU 345 ? A GLU 15 16 1 Y 1 A LYS 346 ? A LYS 16 17 1 Y 1 A SER 347 ? A SER 17 18 1 Y 1 A SER 348 ? A SER 18 19 1 Y 1 A GLU 460 ? A GLU 130 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MET N N N N 240 MET CA C N S 241 MET C C N N 242 MET O O N N 243 MET CB C N N 244 MET CG C N N 245 MET SD S N N 246 MET CE C N N 247 MET OXT O N N 248 MET H H N N 249 MET H2 H N N 250 MET HA H N N 251 MET HB2 H N N 252 MET HB3 H N N 253 MET HG2 H N N 254 MET HG3 H N N 255 MET HE1 H N N 256 MET HE2 H N N 257 MET HE3 H N N 258 MET HXT H N N 259 PHE N N N N 260 PHE CA C N S 261 PHE C C N N 262 PHE O O N N 263 PHE CB C N N 264 PHE CG C Y N 265 PHE CD1 C Y N 266 PHE CD2 C Y N 267 PHE CE1 C Y N 268 PHE CE2 C Y N 269 PHE CZ C Y N 270 PHE OXT O N N 271 PHE H H N N 272 PHE H2 H N N 273 PHE HA H N N 274 PHE HB2 H N N 275 PHE HB3 H N N 276 PHE HD1 H N N 277 PHE HD2 H N N 278 PHE HE1 H N N 279 PHE HE2 H N N 280 PHE HZ H N N 281 PHE HXT H N N 282 PRO N N N N 283 PRO CA C N S 284 PRO C C N N 285 PRO O O N N 286 PRO CB C N N 287 PRO CG C N N 288 PRO CD C N N 289 PRO OXT O N N 290 PRO H H N N 291 PRO HA H N N 292 PRO HB2 H N N 293 PRO HB3 H N N 294 PRO HG2 H N N 295 PRO HG3 H N N 296 PRO HD2 H N N 297 PRO HD3 H N N 298 PRO HXT H N N 299 SER N N N N 300 SER CA C N S 301 SER C C N N 302 SER O O N N 303 SER CB C N N 304 SER OG O N N 305 SER OXT O N N 306 SER H H N N 307 SER H2 H N N 308 SER HA H N N 309 SER HB2 H N N 310 SER HB3 H N N 311 SER HG H N N 312 SER HXT H N N 313 THR N N N N 314 THR CA C N S 315 THR C C N N 316 THR O O N N 317 THR CB C N R 318 THR OG1 O N N 319 THR CG2 C N N 320 THR OXT O N N 321 THR H H N N 322 THR H2 H N N 323 THR HA H N N 324 THR HB H N N 325 THR HG1 H N N 326 THR HG21 H N N 327 THR HG22 H N N 328 THR HG23 H N N 329 THR HXT H N N 330 TRP N N N N 331 TRP CA C N S 332 TRP C C N N 333 TRP O O N N 334 TRP CB C N N 335 TRP CG C Y N 336 TRP CD1 C Y N 337 TRP CD2 C Y N 338 TRP NE1 N Y N 339 TRP CE2 C Y N 340 TRP CE3 C Y N 341 TRP CZ2 C Y N 342 TRP CZ3 C Y N 343 TRP CH2 C Y N 344 TRP OXT O N N 345 TRP H H N N 346 TRP H2 H N N 347 TRP HA H N N 348 TRP HB2 H N N 349 TRP HB3 H N N 350 TRP HD1 H N N 351 TRP HE1 H N N 352 TRP HE3 H N N 353 TRP HZ2 H N N 354 TRP HZ3 H N N 355 TRP HH2 H N N 356 TRP HXT H N N 357 TYR N N N N 358 TYR CA C N S 359 TYR C C N N 360 TYR O O N N 361 TYR CB C N N 362 TYR CG C Y N 363 TYR CD1 C Y N 364 TYR CD2 C Y N 365 TYR CE1 C Y N 366 TYR CE2 C Y N 367 TYR CZ C Y N 368 TYR OH O N N 369 TYR OXT O N N 370 TYR H H N N 371 TYR H2 H N N 372 TYR HA H N N 373 TYR HB2 H N N 374 TYR HB3 H N N 375 TYR HD1 H N N 376 TYR HD2 H N N 377 TYR HE1 H N N 378 TYR HE2 H N N 379 TYR HH H N N 380 TYR HXT H N N 381 VAL N N N N 382 VAL CA C N S 383 VAL C C N N 384 VAL O O N N 385 VAL CB C N N 386 VAL CG1 C N N 387 VAL CG2 C N N 388 VAL OXT O N N 389 VAL H H N N 390 VAL H2 H N N 391 VAL HA H N N 392 VAL HB H N N 393 VAL HG11 H N N 394 VAL HG12 H N N 395 VAL HG13 H N N 396 VAL HG21 H N N 397 VAL HG22 H N N 398 VAL HG23 H N N 399 VAL HXT H N N 400 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PHE N CA sing N N 246 PHE N H sing N N 247 PHE N H2 sing N N 248 PHE CA C sing N N 249 PHE CA CB sing N N 250 PHE CA HA sing N N 251 PHE C O doub N N 252 PHE C OXT sing N N 253 PHE CB CG sing N N 254 PHE CB HB2 sing N N 255 PHE CB HB3 sing N N 256 PHE CG CD1 doub Y N 257 PHE CG CD2 sing Y N 258 PHE CD1 CE1 sing Y N 259 PHE CD1 HD1 sing N N 260 PHE CD2 CE2 doub Y N 261 PHE CD2 HD2 sing N N 262 PHE CE1 CZ doub Y N 263 PHE CE1 HE1 sing N N 264 PHE CE2 CZ sing Y N 265 PHE CE2 HE2 sing N N 266 PHE CZ HZ sing N N 267 PHE OXT HXT sing N N 268 PRO N CA sing N N 269 PRO N CD sing N N 270 PRO N H sing N N 271 PRO CA C sing N N 272 PRO CA CB sing N N 273 PRO CA HA sing N N 274 PRO C O doub N N 275 PRO C OXT sing N N 276 PRO CB CG sing N N 277 PRO CB HB2 sing N N 278 PRO CB HB3 sing N N 279 PRO CG CD sing N N 280 PRO CG HG2 sing N N 281 PRO CG HG3 sing N N 282 PRO CD HD2 sing N N 283 PRO CD HD3 sing N N 284 PRO OXT HXT sing N N 285 SER N CA sing N N 286 SER N H sing N N 287 SER N H2 sing N N 288 SER CA C sing N N 289 SER CA CB sing N N 290 SER CA HA sing N N 291 SER C O doub N N 292 SER C OXT sing N N 293 SER CB OG sing N N 294 SER CB HB2 sing N N 295 SER CB HB3 sing N N 296 SER OG HG sing N N 297 SER OXT HXT sing N N 298 THR N CA sing N N 299 THR N H sing N N 300 THR N H2 sing N N 301 THR CA C sing N N 302 THR CA CB sing N N 303 THR CA HA sing N N 304 THR C O doub N N 305 THR C OXT sing N N 306 THR CB OG1 sing N N 307 THR CB CG2 sing N N 308 THR CB HB sing N N 309 THR OG1 HG1 sing N N 310 THR CG2 HG21 sing N N 311 THR CG2 HG22 sing N N 312 THR CG2 HG23 sing N N 313 THR OXT HXT sing N N 314 TRP N CA sing N N 315 TRP N H sing N N 316 TRP N H2 sing N N 317 TRP CA C sing N N 318 TRP CA CB sing N N 319 TRP CA HA sing N N 320 TRP C O doub N N 321 TRP C OXT sing N N 322 TRP CB CG sing N N 323 TRP CB HB2 sing N N 324 TRP CB HB3 sing N N 325 TRP CG CD1 doub Y N 326 TRP CG CD2 sing Y N 327 TRP CD1 NE1 sing Y N 328 TRP CD1 HD1 sing N N 329 TRP CD2 CE2 doub Y N 330 TRP CD2 CE3 sing Y N 331 TRP NE1 CE2 sing Y N 332 TRP NE1 HE1 sing N N 333 TRP CE2 CZ2 sing Y N 334 TRP CE3 CZ3 doub Y N 335 TRP CE3 HE3 sing N N 336 TRP CZ2 CH2 doub Y N 337 TRP CZ2 HZ2 sing N N 338 TRP CZ3 CH2 sing Y N 339 TRP CZ3 HZ3 sing N N 340 TRP CH2 HH2 sing N N 341 TRP OXT HXT sing N N 342 TYR N CA sing N N 343 TYR N H sing N N 344 TYR N H2 sing N N 345 TYR CA C sing N N 346 TYR CA CB sing N N 347 TYR CA HA sing N N 348 TYR C O doub N N 349 TYR C OXT sing N N 350 TYR CB CG sing N N 351 TYR CB HB2 sing N N 352 TYR CB HB3 sing N N 353 TYR CG CD1 doub Y N 354 TYR CG CD2 sing Y N 355 TYR CD1 CE1 sing Y N 356 TYR CD1 HD1 sing N N 357 TYR CD2 CE2 doub Y N 358 TYR CD2 HD2 sing N N 359 TYR CE1 CZ doub Y N 360 TYR CE1 HE1 sing N N 361 TYR CE2 CZ sing Y N 362 TYR CE2 HE2 sing N N 363 TYR CZ OH sing N N 364 TYR OH HH sing N N 365 TYR OXT HXT sing N N 366 VAL N CA sing N N 367 VAL N H sing N N 368 VAL N H2 sing N N 369 VAL CA C sing N N 370 VAL CA CB sing N N 371 VAL CA HA sing N N 372 VAL C O doub N N 373 VAL C OXT sing N N 374 VAL CB CG1 sing N N 375 VAL CB CG2 sing N N 376 VAL CB HB sing N N 377 VAL CG1 HG11 sing N N 378 VAL CG1 HG12 sing N N 379 VAL CG1 HG13 sing N N 380 VAL CG2 HG21 sing N N 381 VAL CG2 HG22 sing N N 382 VAL CG2 HG23 sing N N 383 VAL OXT HXT sing N N 384 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1X0J _pdbx_initial_refinement_model.details 'PDB entry 1X0J' #